BLASTX nr result
ID: Rehmannia26_contig00019161
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00019161
(323 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [S... 79 6e-13
ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617... 77 3e-12
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 75 1e-11
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A... 75 1e-11
ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein A... 75 1e-11
gb|EMJ07893.1| hypothetical protein PRUPE_ppa024911mg [Prunus pe... 74 2e-11
ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616... 74 2e-11
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A... 73 3e-11
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A... 73 3e-11
ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein A... 73 3e-11
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A... 73 3e-11
ref|XP_004288743.1| PREDICTED: putative ribonuclease H protein A... 73 3e-11
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo... 72 6e-11
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g... 72 6e-11
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta... 72 6e-11
gb|EEE57938.1| hypothetical protein OsJ_08648 [Oryza sativa Japo... 72 8e-11
gb|EEC74135.1| hypothetical protein OsI_09205 [Oryza sativa Indi... 72 8e-11
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 72 8e-11
ref|XP_006285450.1| hypothetical protein CARUB_v10006875mg, part... 72 1e-10
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1... 72 1e-10
>ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [Sorghum bicolor]
gi|241920472|gb|EER93616.1| hypothetical protein
SORBIDRAFT_01g011130 [Sorghum bicolor]
Length = 463
Score = 79.0 bits (193), Expect = 6e-13
Identities = 31/69 (44%), Positives = 47/69 (68%)
Frame = -2
Query: 298 VWKRTWALSIKSKMKHFVWRCINNILPTNDNLIKKGMQVDPFCKLCGEHFETLDHLIFQC 119
+WKR W LS +K+KHF+WR ++N P DNLI++GM++ P C +C + E HL F+C
Sbjct: 141 LWKRVWKLSCPNKIKHFLWRFLHNSHPLRDNLIRRGMEIVPRCPVCNQVGEDGGHLFFKC 200
Query: 118 SRAKLIWKL 92
A+ +W+L
Sbjct: 201 GMARQVWEL 209
>ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
Length = 440
Score = 76.6 bits (187), Expect = 3e-12
Identities = 35/91 (38%), Positives = 53/91 (58%)
Frame = -2
Query: 298 VWKRTWALSIKSKMKHFVWRCINNILPTNDNLIKKGMQVDPFCKLCGEHFETLDHLIFQC 119
+W + W L + SK+KHF+WR + ++LPT +NL+KK ++V P C C E++ H++ QC
Sbjct: 122 IWNQLWRLEVPSKVKHFMWRALTDVLPTTENLLKKYVEVPPACITCHASSESICHILLQC 181
Query: 118 SRAKLIWKLSPIQWTYFDDPSVTFLHWWSQL 26
A+ W S I +F D S L W L
Sbjct: 182 PFARTCWMTSSI--GFFGDGS-NLLLWLEAL 209
>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 74.7 bits (182), Expect = 1e-11
Identities = 31/79 (39%), Positives = 49/79 (62%)
Frame = -2
Query: 319 SSSNLPVVWKRTWALSIKSKMKHFVWRCINNILPTNDNLIKKGMQVDPFCKLCGEHFETL 140
SS++ +WK W L + K+K F+WR + NILPT +NL K+ +P C+ C ET+
Sbjct: 1125 SSNSSSRLWKIPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETV 1184
Query: 139 DHLIFQCSRAKLIWKLSPI 83
H++ +C A+ IW L+P+
Sbjct: 1185 SHVLIECKAARKIWDLAPL 1203
>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 765
Score = 74.7 bits (182), Expect = 1e-11
Identities = 31/79 (39%), Positives = 49/79 (62%)
Frame = -2
Query: 319 SSSNLPVVWKRTWALSIKSKMKHFVWRCINNILPTNDNLIKKGMQVDPFCKLCGEHFETL 140
SS++ +WK W L + K+K F+WR + NILPT +NL K+ +P C+ C ET+
Sbjct: 438 SSNSSSRLWKIPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETV 497
Query: 139 DHLIFQCSRAKLIWKLSPI 83
H++ +C A+ IW L+P+
Sbjct: 498 SHVLIECKAARKIWDLAPL 516
>ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 494
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/80 (42%), Positives = 50/80 (62%)
Frame = -2
Query: 322 SSSSNLPVVWKRTWALSIKSKMKHFVWRCINNILPTNDNLIKKGMQVDPFCKLCGEHFET 143
SSSSN V+WK L++ +K+K F+WR N+LPT +NL K+ + + +CK CG E
Sbjct: 203 SSSSNWSVIWK----LTLPAKIKIFIWRAAKNLLPTAENLWKRKIVHEAYCKRCGNRVEN 258
Query: 142 LDHLIFQCSRAKLIWKLSPI 83
H + C AK +W+LSP+
Sbjct: 259 TLHALITCKAAKKVWQLSPM 278
>gb|EMJ07893.1| hypothetical protein PRUPE_ppa024911mg [Prunus persica]
Length = 378
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/99 (35%), Positives = 50/99 (50%)
Frame = -2
Query: 322 SSSSNLPVVWKRTWALSIKSKMKHFVWRCINNILPTNDNLIKKGMQVDPFCKLCGEHFET 143
S+ S WK WAL + K++ F+WRC N+L +NL ++ + V+ C LCG + +T
Sbjct: 200 SNQSGQSGPWKHIWALQVPPKIQMFIWRCYRNVLAVRENLRRRRVDVEADCLLCGNNGKT 259
Query: 142 LDHLIFQCSRAKLIWKLSPIQWTYFDDPSVTFLHWWSQL 26
HL F+C A+L W SP FL W L
Sbjct: 260 EVHLFFRCEIARLFWFASPSHLDVHGVEGEDFLSCWECL 298
>ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616098 [Citrus sinensis]
Length = 510
Score = 73.9 bits (180), Expect = 2e-11
Identities = 30/72 (41%), Positives = 45/72 (62%)
Frame = -2
Query: 298 VWKRTWALSIKSKMKHFVWRCINNILPTNDNLIKKGMQVDPFCKLCGEHFETLDHLIFQC 119
VW++ W L + +K+KHF+W + N+LPT DNL + ++V C +C + E + H + C
Sbjct: 195 VWQKVWKLKVPAKVKHFIWCAVVNVLPTADNLRRCQVEVPSVCPICNAYDEIVAHCLVNC 254
Query: 118 SRAKLIWKLSPI 83
S AK W LSPI
Sbjct: 255 SFAKSCWLLSPI 266
>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X2 [Citrus sinensis]
Length = 765
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = -2
Query: 322 SSSSNLPVVWKRTWALSIKSKMKHFVWRCINNILPTNDNLIKKGMQVDPFCKLCGEHFET 143
SSS W W L I K+K F+WR N++LPT++NL K+ + P+C+ C H ET
Sbjct: 441 SSSKEDNNSWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRET 500
Query: 142 LDHLIFQCSRAKLIWKLSPIQ 80
+ H +F C ++ IWKL+ +
Sbjct: 501 IFHSLFDCKASRKIWKLTTFE 521
>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis]
Length = 968
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = -2
Query: 322 SSSSNLPVVWKRTWALSIKSKMKHFVWRCINNILPTNDNLIKKGMQVDPFCKLCGEHFET 143
SSS W W L I K+K F+WR N++LPT++NL K+ + P+C+ C H ET
Sbjct: 644 SSSKEDNNSWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRET 703
Query: 142 LDHLIFQCSRAKLIWKLSPIQ 80
+ H +F C ++ IWKL+ +
Sbjct: 704 IFHSLFDCKASRKIWKLTTFE 724
>ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 335
Score = 73.2 bits (178), Expect = 3e-11
Identities = 29/71 (40%), Positives = 43/71 (60%)
Frame = -2
Query: 295 WKRTWALSIKSKMKHFVWRCINNILPTNDNLIKKGMQVDPFCKLCGEHFETLDHLIFQCS 116
W W LS+ K+K FVW+ N+LPT +NL K+G+ + CK CG E + H++ C
Sbjct: 17 WSIIWKLSLPEKIKIFVWKATKNLLPTAENLCKRGIVQEAHCKRCGNKVENILHVLVTCK 76
Query: 115 RAKLIWKLSPI 83
AK +W+ SP+
Sbjct: 77 AAKKVWQRSPV 87
>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 769
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = -2
Query: 322 SSSSNLPVVWKRTWALSIKSKMKHFVWRCINNILPTNDNLIKKGMQVDPFCKLCGEHFET 143
SSS W W L I K+K F+WR N++LPT++NL K+ + P+C+ C H ET
Sbjct: 441 SSSKEDNNSWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRET 500
Query: 142 LDHLIFQCSRAKLIWKLSPIQ 80
+ H +F C ++ IWKL+ +
Sbjct: 501 IFHSLFDCKASRKIWKLTTFE 521
>ref|XP_004288743.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 458
Score = 73.2 bits (178), Expect = 3e-11
Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Frame = -2
Query: 304 PVVWKRTWALSIKSKMKHFVWRCINNILPTNDNLIKKGMQVDPFCKLCGEHFETLDHLIF 125
P VWK W+ K+KHF+WR N LPT NL K + P C C + E+++HL+
Sbjct: 145 PEVWKFIWSSLTLPKVKHFLWRVCTNSLPTMKNLFSKRIAPSPMCPFCLLYEESIEHLLL 204
Query: 124 QCSRAKLIWKLSPIQWTYFDDPSV--TFLHWWSQLCAM 17
QCS +W PI +Y DP++ TF W+ +C +
Sbjct: 205 QCSWTAGVWFRLPI--SYKVDPALITTFDDWFYGVCGL 240
>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
Length = 560
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 23/121 (19%)
Frame = -2
Query: 322 SSSSNLPVVWKRTWALSIKSKMKHFVWRCINNILPTNDNLIKKGMQVDPFCKLCGEHFET 143
+ S+ + WK+ W + + K+KHF+WR +NIL NL ++GM +D C +C E
Sbjct: 275 NGSTEREMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIICNRMNED 334
Query: 142 LDHLIFQCSRAKLIWKLS----------------PIQWTYFDDP-------SVTFLHWWS 32
HL F+C + K +W+ + + T F+ P S+T WWS
Sbjct: 335 AGHLFFKCKKVKKVWQENNLEILRQELAEKRSGREVMETVFNRPAKEILLASITLWQWWS 394
Query: 31 Q 29
+
Sbjct: 395 E 395
>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
Japonica Group]
Length = 1453
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 23/121 (19%)
Frame = -2
Query: 322 SSSSNLPVVWKRTWALSIKSKMKHFVWRCINNILPTNDNLIKKGMQVDPFCKLCGEHFET 143
+ S+ + WK+ W + + K+KHF+WR +NIL NL ++GM +D C +C E
Sbjct: 1168 NGSTEREMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIICNRMNED 1227
Query: 142 LDHLIFQCSRAKLIWKLS----------------PIQWTYFDDP-------SVTFLHWWS 32
HL F+C + K +W+ + + T F+ P S+T WWS
Sbjct: 1228 AGHLFFKCKKVKKVWQENNLEILRQELAEKRSGREVMETVFNRPAKEILLASITLWQWWS 1287
Query: 31 Q 29
+
Sbjct: 1288 E 1288
>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1138
Score = 72.4 bits (176), Expect = 6e-11
Identities = 26/70 (37%), Positives = 47/70 (67%)
Frame = -2
Query: 292 KRTWALSIKSKMKHFVWRCINNILPTNDNLIKKGMQVDPFCKLCGEHFETLDHLIFQCSR 113
++ W+ K+K F+WR ++ LP D +I++GM +DP C++CG+ E+ +H++F CS
Sbjct: 820 EQVWSTKSSPKIKMFLWRILSAALPVADQIIRRGMSIDPRCQICGDEGESTNHVLFTCSM 879
Query: 112 AKLIWKLSPI 83
A+ +W LS +
Sbjct: 880 ARQVWALSGV 889
>gb|EEE57938.1| hypothetical protein OsJ_08648 [Oryza sativa Japonica Group]
Length = 521
Score = 72.0 bits (175), Expect = 8e-11
Identities = 29/67 (43%), Positives = 40/67 (59%)
Frame = -2
Query: 295 WKRTWALSIKSKMKHFVWRCINNILPTNDNLIKKGMQVDPFCKLCGEHFETLDHLIFQCS 116
WK+ W L + K+KHF+WR +N L NL +GM VD C +CG++ E HL+F+C
Sbjct: 154 WKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGQYNEDAGHLLFKCK 213
Query: 115 RAKLIWK 95
K WK
Sbjct: 214 PVKKWWK 220
>gb|EEC74135.1| hypothetical protein OsI_09205 [Oryza sativa Indica Group]
Length = 521
Score = 72.0 bits (175), Expect = 8e-11
Identities = 29/67 (43%), Positives = 40/67 (59%)
Frame = -2
Query: 295 WKRTWALSIKSKMKHFVWRCINNILPTNDNLIKKGMQVDPFCKLCGEHFETLDHLIFQCS 116
WK+ W L + K+KHF+WR +N L NL +GM VD C +CG++ E HL+F+C
Sbjct: 154 WKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGQYNEDAGHLLFKCK 213
Query: 115 RAKLIWK 95
K WK
Sbjct: 214 PVKKWWK 220
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 72.0 bits (175), Expect = 8e-11
Identities = 28/76 (36%), Positives = 47/76 (61%)
Frame = -2
Query: 310 NLPVVWKRTWALSIKSKMKHFVWRCINNILPTNDNLIKKGMQVDPFCKLCGEHFETLDHL 131
+L ++++ W L + K+ HF+WRC+NN L NL + + + C C H ET++HL
Sbjct: 1046 SLDPIFQQIWKLDVPPKIHHFLWRCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHL 1105
Query: 130 IFQCSRAKLIWKLSPI 83
+F+C A+L W +SP+
Sbjct: 1106 LFKCPFARLTWAISPL 1121
>ref|XP_006285450.1| hypothetical protein CARUB_v10006875mg, partial [Capsella rubella]
gi|482554155|gb|EOA18348.1| hypothetical protein
CARUB_v10006875mg, partial [Capsella rubella]
Length = 438
Score = 71.6 bits (174), Expect = 1e-10
Identities = 27/85 (31%), Positives = 48/85 (56%)
Frame = -2
Query: 304 PVVWKRTWALSIKSKMKHFVWRCINNILPTNDNLIKKGMQVDPFCKLCGEHFETLDHLIF 125
P + W L+I K+KHF+WR + + DNL ++ + ++P+C C FE+ +H+ F
Sbjct: 102 PDIASTIWQLNIAPKLKHFLWRLASRAIGVADNLRRRNININPYCSWCCSDFESSEHIFF 161
Query: 124 QCSRAKLIWKLSPIQWTYFDDPSVT 50
C R IW++ + T DP+++
Sbjct: 162 TCPRVHPIWRMVGVPLTLLGDPNIS 186
>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
reverse transcriptase [Arabidopsis thaliana]
Length = 1333
Score = 71.6 bits (174), Expect = 1e-10
Identities = 27/75 (36%), Positives = 50/75 (66%)
Frame = -2
Query: 292 KRTWALSIKSKMKHFVWRCINNILPTNDNLIKKGMQVDPFCKLCGEHFETLDHLIFQCSR 113
++ W+ K+K F+WR +++ LP +I++GM +DP C++CGE E+++H++F CS
Sbjct: 1046 EKIWSTLTSPKIKLFLWRILSSALPVAYQIIRRGMPIDPRCQVCGEEGESINHVLFTCSL 1105
Query: 112 AKLIWKLSPIQWTYF 68
A+ +W LS + + F
Sbjct: 1106 ARQVWALSGVPTSQF 1120