BLASTX nr result

ID: Rehmannia26_contig00018811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00018811
         (662 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004250489.1| PREDICTED: F-box protein At3g07870-like [Sol...    62   2e-07

>ref|XP_004250489.1| PREDICTED: F-box protein At3g07870-like [Solanum lycopersicum]
          Length = 421

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
 Frame = -3

Query: 519 NPSIVNGAMHWYV-------------GEIMIFDMISEDFCCMPFPGGD----TDKASYNQ 391
           NP +VNGA+HW                 IM+F M  E+   MP P       +++     
Sbjct: 236 NPVVVNGALHWITLHDLKRKGVAPCENGIMVFRMDKEELFTMPHPPVSKVCKSNQDHLAM 295

Query: 390 KLLVNEDRLCCFCTSCQVSAINVWILEDYANWTWNRKYTININWNTIKYPFRAGLSV--- 220
           KL+V +D LC          +++W LEDY   +W ++Y IN+  N   +PF   LS    
Sbjct: 296 KLMVKDDHLCLCNMILPWYIVDMWWLEDYETRSWIKRYKINL-LNERIFPFSKRLSEREI 354

Query: 219 -YGAASSVRVISIHKDEVILFWMY---RGMFSYDLCLNTVKKIQL 97
            +  A +V+ + + +  ++++ ++     ++ Y+L   TVKK++L
Sbjct: 355 RHRHAWNVKFLYLQEGGLLIYLIHFYGEEIYLYNLDRRTVKKLEL 399


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