BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00017490
         (1060 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   113   1e-22
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...   112   2e-22
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   105   3e-20
gb|EMJ25879.1| hypothetical protein PRUPE_ppa025799mg [Prunus pe...   103   9e-20
emb|CAB75484.1| putative protein [Arabidopsis thaliana]               103   1e-19
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...   102   2e-19
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   101   4e-19
gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [...   100   7e-19
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta...   100   1e-18
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo...    99   2e-18
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g...    99   2e-18
ref|XP_006405618.1| hypothetical protein EUTSA_v10028075mg [Eutr...    99   4e-18
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A...    98   5e-18
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A...    98   5e-18
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A...    98   5e-18
ref|XP_004301837.1| PREDICTED: putative ribonuclease H protein A...    98   6e-18
ref|XP_002521812.1| conserved hypothetical protein [Ricinus comm...    97   8e-18
ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617...    96   2e-17
ref|XP_004288743.1| PREDICTED: putative ribonuclease H protein A...    96   2e-17
ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ...    96   3e-17

>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  113 bits (283), Expect = 1e-22
 Identities = 72/222 (32%), Positives = 111/222 (50%), Gaps = 4/222 (1%)
 Frame = +3

Query: 9    WNIELLQKVFSEEDCCNILKINSMQQGKRDRLVWHLEKKGKFSVKTSYGALVVDKVRSLD 188
            WNI+LL+++F  ED   I  +        D L WH  K G ++VK+ Y          LD
Sbjct: 756  WNIDLLKELFDPEDVPLISALPIGNPNMEDTLGWHFTKAGNYTVKSGY------HTARLD 809

Query: 189  VAESSNNL-QSLKEIRKRSWKLKVKGKIKHFIWKCYSGILPTNVSLLKRGVDLDCVCKCC 365
            + E +  +   L  ++   WK++   K++HF+W+  SG +P + +L KRG+  D  C  C
Sbjct: 810  LNEGTTLIGPDLTTLKAYIWKVQCPPKLRHFLWQILSGCVPVSENLRKRGILCDKGCVSC 869

Query: 366  GNAEESIEHLFFQCNRAILIWKHSPVQWDGIVAVSDSFCLWWSNVCSLKSNTISEKRIQL 545
            G +EESI H  FQC+ A  IW  S +     +  S+S    ++N+  L     S      
Sbjct: 870  GASEESINHTLFQCHPARQIWALSQIPTAPGIFPSNSI---FTNLDHLFWRIPSGVDSAP 926

Query: 546  STYILWWMWKTRNLWIFENTWISEVDTVSLAVAE---WTEFQ 662
              +I+W++WK RN  +FEN     ++ + LAV E   W E Q
Sbjct: 927  YPWIIWYIWKARNEKVFENVDKDPMEILLLAVKEAQSWQEAQ 968


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1225

 Score =  112 bits (281), Expect = 2e-22
 Identities = 70/218 (32%), Positives = 107/218 (49%), Gaps = 5/218 (2%)
 Frame = +3

Query: 9    WNIELLQKVFSEEDCCNILKINSMQQGKRDRLVWHLEKKGKFSVKTSYGALVVDKVRSLD 188
            W +  LQ++    D   IL I   +  K D   W   K G ++VK+ Y A       + D
Sbjct: 852  WKLGRLQELVDPSDIPLILGIRPSRTYKSDDFSWSFTKSGNYTVKSGYWA-------ARD 904

Query: 189  VAESSNNLQ----SLKEIRKRSWKLKVKGKIKHFIWKCYSGILPTNVSLLKRGVDLDCVC 356
            ++  + +L     S+  ++ + WK+K   K KHF W+C SG L TN  L  R +  + VC
Sbjct: 905  LSRPTCDLPFQGPSVSALQAQVWKIKTTRKFKHFEWQCLSGCLATNQRLFSRHIGTEKVC 964

Query: 357  KCCGNAEESIEHLFFQCNRAILIWKHSPVQWDGIVAVSDSFCLWWSNVCSL-KSNTISEK 533
              CG  EESI HL F C  +  IW  SP+     +   +S    +  + S  K   I+E 
Sbjct: 965  PRCGAEEESINHLLFLCPPSRQIWALSPIPSSEYIFPRNSLFYNFDFLLSRGKEFDIAED 1024

Query: 534  RIQLSTYILWWMWKTRNLWIFENTWISEVDTVSLAVAE 647
             +++  +ILW++WK+RN +IFEN   S    +  A+ E
Sbjct: 1025 IMEIFPWILWYIWKSRNRFIFENVIESPQVILDFAIQE 1062


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  105 bits (262), Expect = 3e-20
 Identities = 63/218 (28%), Positives = 108/218 (49%)
 Frame = +3

Query: 9    WNIELLQKVFSEEDCCNILKINSMQQGKRDRLVWHLEKKGKFSVKTSYGALVVDKVRSLD 188
            WN+ELL  +F   +   I +I    Q K D+ +W + K G+F+V+++Y   +++  ++  
Sbjct: 981  WNVELLNTLFQPWESTAIQRIPVALQKKPDQWMWMMSKNGQFTVRSAYYHELLEDRKTGP 1040

Query: 189  VAESSNNLQSLKEIRKRSWKLKVKGKIKHFIWKCYSGILPTNVSLLKRGVDLDCVCKCCG 368
                  NL+  ++I    WK K+  K+K F WK     L    ++ KRG+++D  C  CG
Sbjct: 1041 STSRGPNLKLWQKI----WKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCG 1096

Query: 369  NAEESIEHLFFQCNRAILIWKHSPVQWDGIVAVSDSFCLWWSNVCSLKSNTISEKRIQLS 548
              EE+ EHL + C+ +   W  SP++       + SF +W  ++     +T   +   L 
Sbjct: 1097 EKEETTEHLIWGCDESSRAWYISPLRIHTGNIEAGSFRIWVESLLDTHKDT---EWWALF 1153

Query: 549  TYILWWMWKTRNLWIFENTWISEVDTVSLAVAEWTEFQ 662
              I W +W  RN W+FE   ++  + V  AV    EF+
Sbjct: 1154 WMICWNIWLGRNKWVFEKKKLAFQEVVERAVRGVMEFE 1191


>gb|EMJ25879.1| hypothetical protein PRUPE_ppa025799mg [Prunus persica]
          Length = 867

 Score =  103 bits (258), Expect = 9e-20
 Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 4/226 (1%)
 Frame = +3

Query: 9    WNIELLQKVFSEEDCCNILKINSMQQGKRDRLVWHLEKKGKFSVKTSYGALVVDKVRSLD 188
            W+ ELL+  F E++   IL+I      + D+L+ H ++ GK+SVK+ Y    + K R   
Sbjct: 624  WDKELLKANFWEQEVKAILQIPLASIHREDKLICHYDRSGKYSVKSGYMVACMKKQRENG 683

Query: 189  VAESSNNLQSLKEIRKRSWKLKVKGKIKHFIWKCYSGILPTNVSLLKRGVDLDCVCKCCG 368
            +  SS    +L  + K+ W+L+V  KIK F+W+C  G LP+  +L  R +    +C  CG
Sbjct: 684  MEGSSTQDGTL--LWKKLWRLQVLNKIKFFLWRCIWGFLPSRQNLYHRKILNSPICPRCG 741

Query: 369  NAEESIEHLFFQCNRAI--LIWKHSPVQ--WDGIVAVSDSFCLWWSNVCSLKSNTISEKR 536
               ESI H  + CN +     W+ +  +  W  ++ VS                  S++ 
Sbjct: 742  KKVESINHAIWACNESANRHEWRITSFKELWQSVIVVS------------------SKEE 783

Query: 537  IQLSTYILWWMWKTRNLWIFENTWISEVDTVSLAVAEWTEFQNVTG 674
            + L  ++ W +W  RN  +F+   +  V   + A+A   EF  V G
Sbjct: 784  VDLFAFLCWDIWNDRNNLLFQGRGLESVSVFNKALAYQIEFYYVKG 829


>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
          Length = 851

 Score =  103 bits (256), Expect = 1e-19
 Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 5/226 (2%)
 Frame = +3

Query: 9    WNIELLQKVFSEEDCCNILKINSMQQGKRDRLVWHLEKKGKFSVKTSYGALVVDKVRSLD 188
            W+   LQ    + D   I +I    + K DRL+W     G ++V++ Y     D   ++ 
Sbjct: 593  WDNAKLQTFVDQSDHDYIKRIYLSTRSKTDRLIWSYNSTGDYTVRSGYWLSTHDPSNTIP 652

Query: 189  VAESSNNLQSLKEIRKRSWKLKVKGKIKHFIWKCYSGILPTNVSLLKRGVDLDCVCKCCG 368
                 +    LK    + W L +  K+KHF+W+  S  LPT   L  RG+ +D  C  C 
Sbjct: 653  TMAKPHGSVDLKT---KIWNLPIMPKLKHFLWRILSKALPTTDRLTTRGMRIDPGCPRCR 709

Query: 369  NAEESIEHLFFQCNRAILIWKHS--PVQWDGIVA--VSDSFCLWWSNVCSLKSN-TISEK 533
               ESI H  F C  A + W+ S  P+    I++  + D+     SN+  L  N TI++ 
Sbjct: 710  RENESINHALFTCPFATMAWRLSDTPLYRSSILSNNIEDNI----SNILLLLQNTTITDS 765

Query: 534  RIQLSTYILWWMWKTRNLWIFENTWISEVDTVSLAVAEWTEFQNVT 671
            +  +  ++LW +WK RN  +F N   S   TV  A AE  E+ N T
Sbjct: 766  QKLIPFWLLWRIWKARNNVVFNNLRESPSITVVRAKAETNEWLNAT 811


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
            gi|7267666|emb|CAB78094.1| RNA-directed DNA
            polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score =  102 bits (255), Expect = 2e-19
 Identities = 69/227 (30%), Positives = 108/227 (47%), Gaps = 7/227 (3%)
 Frame = +3

Query: 3    QGWNIELLQKVFSE-EDCCNILKINSMQQGKRDRLVWHLEKKGKFSVKTSYGALVVDKVR 179
            + WN+E ++K   + ED    + IN++    +D LVW   K G+++ KT Y    + K+ 
Sbjct: 905  KSWNVEAIRKHLPQYEDQIRKITINALPL--QDSLVWLPVKSGEYTTKTGYA---LAKLN 959

Query: 180  SLDVAESSNNLQSLKEIRKRSWKLKVKGKIKHFIWKCYSGILPTNVSLLKRGVDLDCVCK 359
            S   ++   N Q      K  WK+    K+KHF+WK   G LP   +L +R ++ +  CK
Sbjct: 960  SFPASQLDFNWQ------KNIWKIHTSPKVKHFLWKAMKGALPVGEALSRRNIEAEVTCK 1013

Query: 360  CCGNAEESIEHLFFQCNRAILIWKHSPVQWDGIVAVSDSFCLWW---SNVCSLKSNTISE 530
             CG  E S+ HL   C  A  +W+ +PV ++   A   S  L       + +L    +  
Sbjct: 1014 RCGQTESSL-HLMLLCPYAKKVWELAPVLFNPSEATHSSVALLLVDAKRMVALPPTGLGS 1072

Query: 531  KRIQLSTYILWWMWKTRNLWIFENTWISEVDTVSLAVAE---WTEFQ 662
                L  ++LW +WK RN  IF+N   SE   V  A+ +   W E Q
Sbjct: 1073 --APLYPWLLWHLWKARNRLIFDNHSCSEEGLVLKAILDARAWMEAQ 1117


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  101 bits (252), Expect = 4e-19
 Identities = 60/203 (29%), Positives = 96/203 (47%), Gaps = 4/203 (1%)
 Frame = +3

Query: 9    WNIELLQKVFSEEDCCNILKINSMQQGKRDRLVWHLEKKGKFSVKTSYGALVVDKVRSLD 188
            WN+EL+++ F+E D   IL I    +  +D L W   K G +SVKT+Y            
Sbjct: 977  WNVELIERHFNERDQQCILAIPLSTRCLQDELTWAYSKDGTYSVKTAY------------ 1024

Query: 189  VAESSNNLQSLKEIRKRSWKLKVKGKIKHFIWKCYSGILPTNVSLLKRGVDLDCVCKCCG 368
            +     NL     +    W L V  K++HF+W+  +  LP    L +R +  +  C CC 
Sbjct: 1025 MLGKGGNLDDFHRVWNILWSLNVSPKVRHFLWRACTSSLPVRKVLQRRHLIDEAGCPCCA 1084

Query: 369  NAEESIEHLFFQCNRAILIWKH--SPVQWDGI--VAVSDSFCLWWSNVCSLKSNTISEKR 536
              +E+  HLF++C  ++ +W+   S +   GI   A+ D+   W         + +  K 
Sbjct: 1085 REDETQFHLFYRCPMSLKLWEELGSYILLPGIEDEAMCDTLVRW---------SQMDAKV 1135

Query: 537  IQLSTYILWWMWKTRNLWIFENT 605
            +Q   YILW +W  RN  +FE+T
Sbjct: 1136 VQKGCYILWNVWVERNRRVFEHT 1158


>gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica]
          Length = 1060

 Score =  100 bits (250), Expect = 7e-19
 Identities = 64/225 (28%), Positives = 110/225 (48%), Gaps = 5/225 (2%)
 Frame = +3

Query: 9    WNIELLQKVFSEEDCCNILKINSMQQGKRDRLVWHLEKKGKFSVKTSYGALVVDKVRSLD 188
            WN+ LL+ +F +++   IL+I        D L+WH E+ G +SVK+ Y    ++K +   
Sbjct: 673  WNVPLLKDIFWDQEVDAILQIPLASLAGHDCLIWHYERNGMYSVKSGYRLAGLEKDKMSG 732

Query: 189  VAESSNNLQSLKEIRKRSWKLKVKGKIKHFIWKCYSGILPTNVSLLKRGVDLDCVCKCCG 368
               +  +L S  +  K+ W LK+  KIK F+W+C    LP    L  R +    +C  C 
Sbjct: 733  EPSARVDLNS--KFWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPKCH 790

Query: 369  NAEESIEHLFFQCNRAILIWKHSPVQWDGIVAV--SDSFCLWWSNVCSLKSNTISEKRIQ 542
               ES+ H  + C  A  +W++S   W  +  V   +SF   W    +L+ ++  E++  
Sbjct: 791  RKAESVLHAVWLCEAAKEVWRNS--AWGNVCEVWRVNSFRELWH---ALQLSSSGEEQ-G 844

Query: 543  LSTYILWWMWKTRNLWIFE---NTWISEVDTVSLAVAEWTEFQNV 668
            L  Y+ W +W  RN +IFE    T I  +  ++    E+++  N+
Sbjct: 845  LFAYLCWGLWNRRNSFIFEGKSETAIQLLSRMTKLAQEFSDANNI 889


>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 773

 Score =  100 bits (249), Expect = 1e-18
 Identities = 71/224 (31%), Positives = 106/224 (47%), Gaps = 5/224 (2%)
 Frame = +3

Query: 9    WNIELLQKVFSEEDCCNILKINSMQQGKRDRLVWHLEKKGKFSVKTSYGALVVDKVRSLD 188
            WN +LL K+  + D  +I  I     G  D + W     G +SVK+ Y  L+    +   
Sbjct: 425  WNEDLLCKLIHQNDIPHIRAIRPSITGANDAITWIYTHDGNYSVKSGYH-LLRKLSQQQH 483

Query: 189  VAESSNNLQSLKEIRKRSWKLKVKGKIKHFIWKCYSGILPTNVSLLKRGVDLDCVCKCCG 368
             +  S N  S + +    WK     KIKHF W+     LPT  +L +R +  D  C+ CG
Sbjct: 484  ASLPSPNEVSAQTVFTNIWKQNAPPKIKHFWWRSAHNALPTAGNLKRRRLITDDTCQRCG 543

Query: 369  NAEESIEHLFFQCNRAILIWKHSPVQ-WDGIVAVSDSFCLWWSNVCSL-KSNTISEKRIQ 542
             A E + HL FQC  +  IW+ + ++   G   +S+SF     N+ S+ K N  + K + 
Sbjct: 544  EASEDVNHLLFQCRVSKEIWEQAHIKLCPGDSLMSNSFN---QNLESIQKLNQSARKDVS 600

Query: 543  LSTYILWWMWKTRNLWIFENTWISEVDTVSLAV---AEWTEFQN 665
            L  +I W +WK RN  IF N   S  D++  A+    +W E  N
Sbjct: 601  LFPFIGWRIWKMRNDLIFNNKRWSIPDSIQKALIDQQQWKESLN 644


>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
          Length = 560

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 2/194 (1%)
 Frame = +3

Query: 9   WNIELLQKVFSEEDCCNILKINSMQQGKRDRLVWHLEKKGKFSVKTSYGALVVDKV--RS 182
           W++ELL + F  ED  N+++   +     D L WH ++KG FSVK++Y      ++  R 
Sbjct: 209 WDVELLTQTFWPEDV-NMIRTIPVHIEMDDMLAWHYDEKGLFSVKSAYKVQRDGELQRRK 267

Query: 183 LDVAESSNNLQSLKEIRKRSWKLKVKGKIKHFIWKCYSGILPTNVSLLKRGVDLDCVCKC 362
              A  SN     +   K+ WK+++ GK+KHFIW+    IL   V+L +RG+DLD  C  
Sbjct: 268 RGSAGLSNGSTEREMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCII 327

Query: 363 CGNAEESIEHLFFQCNRAILIWKHSPVQWDGIVAVSDSFCLWWSNVCSLKSNTISEKRIQ 542
           C    E   HLFF+C +   +W+ + ++   I+    +       V     N    K I 
Sbjct: 328 CNRMNEDAGHLFFKCKKVKKVWQENNLE---ILRQELAEKRSGREVMETVFNR-PAKEIL 383

Query: 543 LSTYILWWMWKTRN 584
           L++  LW  W  RN
Sbjct: 384 LASITLWQWWSERN 397


>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
            gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
            Japonica Group]
          Length = 1453

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 2/194 (1%)
 Frame = +3

Query: 9    WNIELLQKVFSEEDCCNILKINSMQQGKRDRLVWHLEKKGKFSVKTSYGALVVDKV--RS 182
            W++ELL + F  ED  N+++   +     D L WH ++KG FSVK++Y      ++  R 
Sbjct: 1102 WDVELLTQTFWPEDV-NMIRTIPVHIEMDDMLAWHYDEKGLFSVKSAYKVQRDGELQRRK 1160

Query: 183  LDVAESSNNLQSLKEIRKRSWKLKVKGKIKHFIWKCYSGILPTNVSLLKRGVDLDCVCKC 362
               A  SN     +   K+ WK+++ GK+KHFIW+    IL   V+L +RG+DLD  C  
Sbjct: 1161 RGSAGLSNGSTEREMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCII 1220

Query: 363  CGNAEESIEHLFFQCNRAILIWKHSPVQWDGIVAVSDSFCLWWSNVCSLKSNTISEKRIQ 542
            C    E   HLFF+C +   +W+ + ++   I+    +       V     N    K I 
Sbjct: 1221 CNRMNEDAGHLFFKCKKVKKVWQENNLE---ILRQELAEKRSGREVMETVFNR-PAKEIL 1276

Query: 543  LSTYILWWMWKTRN 584
            L++  LW  W  RN
Sbjct: 1277 LASITLWQWWSERN 1290


>ref|XP_006405618.1| hypothetical protein EUTSA_v10028075mg [Eutrema salsugineum]
           gi|557106756|gb|ESQ47071.1| hypothetical protein
           EUTSA_v10028075mg [Eutrema salsugineum]
          Length = 343

 Score = 98.6 bits (244), Expect = 4e-18
 Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 5/195 (2%)
 Frame = +3

Query: 96  DRLVWHLEKKGKFSVKTSYGALVVDKVRSLDVAESSNNLQSLKEIRKRSWKLKVKGKIKH 275
           DRLVW  +K GK+SV++ YG         L V+E+    Q     +K  WKL+   K+K 
Sbjct: 25  DRLVWLPQKNGKYSVRSGYG---------LSVSETIPERQRNFNWQKNIWKLQTVPKVKQ 75

Query: 276 FIWKCYSGILPTNVSLLKRGVDLDCVCKCCGNAEESIEHLFFQCNRAILIWKHSPVQWDG 455
           F+W+      P  V L++RG+ +D  CK CGN  E+I H+   C  A  +W  +P++   
Sbjct: 76  FLWRAVVEAFPVGVELVRRGIQVDFACKICGN-PETITHVLRDCQLARKVWNLAPLRTQS 134

Query: 456 IVAVSDSFCL-WWSNVCSLKS-NTISEKRIQLSTYILWWMWKTRNLWIFENTWISEVDTV 629
              ++   CL + +++ S+ S   I      L  +I W +W  RN  IF +T  S  + +
Sbjct: 135 --HLNTVLCLDFLAHILSMVSLPPIEVSTTSLPAWICWNLWTPRNHRIFSDTTYSAYEII 192

Query: 630 SLAVAE---WTEFQN 665
           + A+ +   W E Q+
Sbjct: 193 TKAICDARAWQEAQS 207


>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X2 [Citrus sinensis]
          Length = 765

 Score = 98.2 bits (243), Expect = 5e-18
 Identities = 59/202 (29%), Positives = 105/202 (51%), Gaps = 2/202 (0%)
 Frame = +3

Query: 3   QGWNIELLQKVFSEEDCCNILKINSMQQGKRDRLVWHLEKKGKFSVKTSYGALVVDKV-- 176
           Q W  +++++ F +ED   ILKI   +Q   D+++WH +KKG +SVK+ Y   +  K   
Sbjct: 379 QCWRDDVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQMKFPN 438

Query: 177 RSLDVAESSNNLQSLKEIRKRSWKLKVKGKIKHFIWKCYSGILPTNVSLLKRGVDLDCVC 356
           R     E +N+  S+       W L++  K+K F+W+  + +LPT+ +L KR +     C
Sbjct: 439 RPSSSKEDNNSWNSI-------WYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWC 491

Query: 357 KCCGNAEESIEHLFFQCNRAILIWKHSPVQWDGIVAVSDSFCLWWSNVCSLKSNTISEKR 536
           + C +  E+I H  F C  +  IWK +  + +    V    C    ++    ++  S+  
Sbjct: 492 QRCRSHRETIFHSLFDCKASRKIWKLTTFEEE----VKALKCKDVLSLLLALADRRSKTE 547

Query: 537 IQLSTYILWWMWKTRNLWIFEN 602
           ++L   + W +W +RNL+IF+N
Sbjct: 548 MELIVAVCWSIWHSRNLFIFQN 569


>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
            [Citrus sinensis]
          Length = 968

 Score = 98.2 bits (243), Expect = 5e-18
 Identities = 59/202 (29%), Positives = 105/202 (51%), Gaps = 2/202 (0%)
 Frame = +3

Query: 3    QGWNIELLQKVFSEEDCCNILKINSMQQGKRDRLVWHLEKKGKFSVKTSYGALVVDKV-- 176
            Q W  +++++ F +ED   ILKI   +Q   D+++WH +KKG +SVK+ Y   +  K   
Sbjct: 582  QCWRDDVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQMKFPN 641

Query: 177  RSLDVAESSNNLQSLKEIRKRSWKLKVKGKIKHFIWKCYSGILPTNVSLLKRGVDLDCVC 356
            R     E +N+  S+       W L++  K+K F+W+  + +LPT+ +L KR +     C
Sbjct: 642  RPSSSKEDNNSWNSI-------WYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWC 694

Query: 357  KCCGNAEESIEHLFFQCNRAILIWKHSPVQWDGIVAVSDSFCLWWSNVCSLKSNTISEKR 536
            + C +  E+I H  F C  +  IWK +  + +    V    C    ++    ++  S+  
Sbjct: 695  QRCRSHRETIFHSLFDCKASRKIWKLTTFEEE----VKALKCKDVLSLLLALADRRSKTE 750

Query: 537  IQLSTYILWWMWKTRNLWIFEN 602
            ++L   + W +W +RNL+IF+N
Sbjct: 751  MELIVAVCWSIWHSRNLFIFQN 772


>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 769

 Score = 98.2 bits (243), Expect = 5e-18
 Identities = 59/202 (29%), Positives = 105/202 (51%), Gaps = 2/202 (0%)
 Frame = +3

Query: 3   QGWNIELLQKVFSEEDCCNILKINSMQQGKRDRLVWHLEKKGKFSVKTSYGALVVDKV-- 176
           Q W  +++++ F +ED   ILKI   +Q   D+++WH +KKG +SVK+ Y   +  K   
Sbjct: 379 QCWRDDVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQMKFPN 438

Query: 177 RSLDVAESSNNLQSLKEIRKRSWKLKVKGKIKHFIWKCYSGILPTNVSLLKRGVDLDCVC 356
           R     E +N+  S+       W L++  K+K F+W+  + +LPT+ +L KR +     C
Sbjct: 439 RPSSSKEDNNSWNSI-------WYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWC 491

Query: 357 KCCGNAEESIEHLFFQCNRAILIWKHSPVQWDGIVAVSDSFCLWWSNVCSLKSNTISEKR 536
           + C +  E+I H  F C  +  IWK +  + +    V    C    ++    ++  S+  
Sbjct: 492 QRCRSHRETIFHSLFDCKASRKIWKLTTFEEE----VKALKCKDVLSLLLALADRRSKTE 547

Query: 537 IQLSTYILWWMWKTRNLWIFEN 602
           ++L   + W +W +RNL+IF+N
Sbjct: 548 MELIVAVCWSIWHSRNLFIFQN 569


>ref|XP_004301837.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 420

 Score = 97.8 bits (242), Expect = 6e-18
 Identities = 58/223 (26%), Positives = 115/223 (51%), Gaps = 3/223 (1%)
 Frame = +3

Query: 9   WNIELLQKVFSEEDCCNILKINSMQQGKRDRLVWHLEKKGKFSVKTSY---GALVVDKVR 179
           W ++LL+++F  ++   I KI    +   DRL+WH +K G +SV++ Y   G +  D+ R
Sbjct: 78  WMVDLLEELFYADEVEMIRKIPLSIRSPDDRLIWHFDKHGLYSVRSGYHLAGGVNADQSR 137

Query: 180 SLDVAESSNNLQSLKEIRKRSWKLKVKGKIKHFIWKCYSGILPTNVSLLKRGVDLDCVCK 359
               + + +N     +  K+ WK++V  K+K F+W+    ILPT V+L K+    + +C 
Sbjct: 138 GSSSSPAGSN-----KTWKQVWKVRVLPKVKSFVWRLMRNILPTKVALSKKICMEEQLCP 192

Query: 360 CCGNAEESIEHLFFQCNRAILIWKHSPVQWDGIVAVSDSFCLWWSNVCSLKSNTISEKRI 539
            C    E+  HLF +C+ A  +   SP+        +++   W   +     + ++  ++
Sbjct: 193 FCRTENETALHLFKECSGAACMLIISPLGLRARNHGANNMEEWVVGM----MDVLTTGQV 248

Query: 540 QLSTYILWWMWKTRNLWIFENTWISEVDTVSLAVAEWTEFQNV 668
           ++   +LW +W  RN  +++ T    ++TV+ ++    E+QN+
Sbjct: 249 EMFFMLLWALWVERNNMVWQGTSFDPINTVTWSMLLLQEYQNL 291


>ref|XP_002521812.1| conserved hypothetical protein [Ricinus communis]
           gi|223539025|gb|EEF40622.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 315

 Score = 97.4 bits (241), Expect = 8e-18
 Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 5/215 (2%)
 Frame = +3

Query: 33  VFSEEDCCNILKINSMQQGKRDRLVWHLEKKGKFSVKTSYGALVVDKVRSLDVAESSNNL 212
           +F       IL+++   +   DRL WH     ++SV + Y A V       +     +NL
Sbjct: 106 IFQPNQVKEILEVSLSTKNAIDRLKWHYHNSSRYSVGSGYFAWV-----HRERIGHHSNL 160

Query: 213 QSLKEIR---KRSWKLKVKGKIKHFIWKCYSGILPTNVSLLKR-GVDLDCVCKCCGNAEE 380
           Q    +    K  WK+K+  KIK FIWK +S  LP   S   R G D  C+   CG A +
Sbjct: 161 QEATAVLHHCKNLWKMKIPNKIKIFIWKLFSIALPVGSSSASRLGADGSCIW--CG-AWK 217

Query: 381 SIEHLFFQCNRAILIWKHSPVQW-DGIVAVSDSFCLWWSNVCSLKSNTISEKRIQLSTYI 557
           S  HLFF C  +  +W  SP++    +  +SD   +W   +  +++ + ++       +I
Sbjct: 218 SRMHLFFLCPFSQHVWSLSPLRLLPSVFHLSDISLVWEKILLDIQTLSSNDHLPSCPAFI 277

Query: 558 LWWMWKTRNLWIFENTWISEVDTVSLAVAEWTEFQ 662
           LW +WK RN  +F+N W SE   +  A+ +   FQ
Sbjct: 278 LWHIWKARNASVFDNRWTSEQGLLHRALTDLDNFQ 312


>ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
          Length = 440

 Score = 96.3 bits (238), Expect = 2e-17
 Identities = 59/192 (30%), Positives = 93/192 (48%)
 Frame = +3

Query: 9   WNIELLQKVFSEEDCCNILKINSMQQGKRDRLVWHLEKKGKFSVKTSYGALVVDKVRSLD 188
           W+ ++L  +F+E D   I +I    +   D   W  E KG ++V++SY  L       LD
Sbjct: 61  WDSDILNDIFNERDKNLIWQIPLSNRSNADSWYWMHEAKGVYTVRSSYKMLAP----CLD 116

Query: 189 VAESSNNLQSLKEIRKRSWKLKVKGKIKHFIWKCYSGILPTNVSLLKRGVDLDCVCKCCG 368
           +  SS        I  + W+L+V  K+KHF+W+  + +LPT  +LLK+ V++   C  C 
Sbjct: 117 IPSSS--------IWNQLWRLEVPSKVKHFMWRALTDVLPTTENLLKKYVEVPPACITCH 168

Query: 369 NAEESIEHLFFQCNRAILIWKHSPVQWDGIVAVSDSFCLWWSNVCSLKSNTISEKRIQLS 548
            + ESI H+  QC  A   W  S +   G      +  LW   +     N  S ++ QL+
Sbjct: 169 ASSESICHILLQCPFARTCWMTSSI---GFFGDGSNLLLWLEAL----FNRYSLEQTQLA 221

Query: 549 TYILWWMWKTRN 584
             I W +W+ RN
Sbjct: 222 VMICWSLWQNRN 233


>ref|XP_004288743.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 458

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 7/222 (3%)
 Frame = +3

Query: 9   WNIELLQKVFSEEDCCNILKINSMQQGKRDRLVWHLEKKGKFSVKTSYGALVVDKVR-SL 185
           WN+  +    S E+   I  I      + DRL+W +EK G++ V++ Y      +   SL
Sbjct: 75  WNLSPIIHHLSSEEVTAIRSIPISDTWEHDRLIWPMEKNGEYKVRSGYDMQHASRNSPSL 134

Query: 186 DVAESSNNLQSLKEIRKRSWKLKVKGKIKHFIWKCYSGILPTNVSLLKRGVDLDCVCKCC 365
              +SS+ ++   E+ K  W      K+KHF+W+  +  LPT  +L  + +    +C  C
Sbjct: 135 QSMDSSHIIKP--EVWKFIWSSLTLPKVKHFLWRVCTNSLPTMKNLFSKRIAPSPMCPFC 192

Query: 366 GNAEESIEHLFFQCNRAILIWKHSPVQWDGIVAVSDSFCLWWSNVCS-LKSNTISEKRIQ 542
              EESIEHL  QC+    +W   P+ +    A+  +F  W+  VC  LK N+ + + + 
Sbjct: 193 LLYEESIEHLLLQCSWTAGVWFRLPISYKVDPALITTFDDWFYGVCGLLKQNSRAWEILS 252

Query: 543 L-STYILWWMWKTRNLWIFE----NTWISEVDTVSLAVAEWT 653
              ++ LW +WK    +++E    N W   +++V   VAE++
Sbjct: 253 CWVSFALWNIWKEMCTFLYEHRDPNAW-GVIESVKYVVAEFS 293


>ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR
           reverse transcriptase [Arabidopsis thaliana]
           gi|332641254|gb|AEE74775.1| RNase H domain-containing
           protein [Arabidopsis thaliana]
          Length = 484

 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 1/222 (0%)
 Frame = +3

Query: 9   WNIELLQKVFSEEDCCNILKINSMQQGKRDRLVWHLEKKGKFSVKTSYGALVVDKVRSLD 188
           W+   + +   + D   I +I   +  K D+++W+    G+++V++ Y  L  D   ++ 
Sbjct: 88  WDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIP 147

Query: 189 VAESSNNLQSLKEIRKRSWKLKVKGKIKHFIWKCYSGILPTNVSLLKRGVDLDCVCKCCG 368
                +    LK    R W L +  K+KHF+W+  S  L T   L  RG+ +D  C  C 
Sbjct: 148 AINPPHGSIDLKT---RIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCH 204

Query: 369 NAEESIEHLFFQCNRAILIWKHSPVQWDGIVAVSDSFCLWWSNVCS-LKSNTISEKRIQL 545
              ESI H  F C  A + W+ S         +S+ F    SN+ + ++  T+S+    L
Sbjct: 205 RENESINHALFTCPFATMAWRLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLL 264

Query: 546 STYILWWMWKTRNLWIFENTWISEVDTVSLAVAEWTEFQNVT 671
             +++W +WK RN  +F     S   TV  A AE  ++ N T
Sbjct: 265 PVWLIWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNAT 306