BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00017149
         (524 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    60   2e-07
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    55   7e-06

>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1225

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
 Frame = -3

Query: 516  CGAAEETLEHLLFTCERAVKAWRLSPVWWSEGVSP-NCSVRQWWGNLCLGFWDKVFQDRV 340
            CGA EE++ HLLF C  + + W LSP+  SE + P N     +   L  G    + +D +
Sbjct: 967  CGAEEESINHLLFLCPPSRQIWALSPIPSSEYIFPRNSLFYNFDFLLSRGKEFDIAEDIM 1026

Query: 339  QLSTYILWWLWKTRNSWMFEGRVTSELDTVSLAWTEWN 226
            ++  +ILW++WK+RN ++FE  + S    +  A  E N
Sbjct: 1027 EIFPWILWYIWKSRNRFIFENVIESPQVILDFAIQEAN 1064


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
 Frame = -3

Query: 516  CGAAEETLEHLLFTCERAVKAWRLSPVWWSEGVSPNCSVRQWWGNLCLGFWDKVFQDRVQ 337
            CGA+EE++ H LF C  A + W LS +  + G+ P+ S+   + NL   FW       V 
Sbjct: 869  CGASEESINHTLFQCHPARQIWALSQIPTAPGIFPSNSI---FTNLDHLFWR--IPSGVD 923

Query: 336  LSTY--ILWWLWKTRNSWMFEGRVTSELDTVSLAWTE---WNE 223
             + Y  I+W++WK RN  +FE      ++ + LA  E   W E
Sbjct: 924  SAPYPWIIWYIWKARNEKVFENVDKDPMEILLLAVKEAQSWQE 966