BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00015738
         (654 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008992319.1| hypothetical protein Salmi_Mp055 (mitochondr...   129   8e-28
ref|XP_004309966.1| PREDICTED: putative ribonuclease H protein A...   124   2e-26
ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein A...   124   2e-26
ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein A...   120   3e-25
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A...   115   1e-23
ref|XP_004304923.1| PREDICTED: putative ribonuclease H protein A...   112   1e-22
ref|XP_004308354.1| PREDICTED: putative ribonuclease H protein A...   110   4e-22
gb|EMJ14652.1| hypothetical protein PRUPE_ppa024777mg, partial [...   105   2e-20
ref|XP_004301067.1| PREDICTED: uncharacterized protein LOC101309...   103   3e-20
gb|EXB74531.1| hypothetical protein L484_026228 [Morus notabilis]     103   4e-20
ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein A...   103   6e-20
ref|XP_004304990.1| PREDICTED: putative ribonuclease H protein A...   100   3e-19
ref|XP_004289115.1| PREDICTED: putative ribonuclease H protein A...    99   8e-19
ref|XP_002516681.1| conserved hypothetical protein [Ricinus comm...    97   4e-18
ref|XP_004289281.1| PREDICTED: putative ribonuclease H protein A...    96   1e-17
gb|AGV40503.1| hypothetical protein [Phaseolus vulgaris]               93   8e-17
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    92   1e-16
ref|XP_004305144.1| PREDICTED: putative ribonuclease H protein A...    92   2e-16
gb|EOY28460.1| Polynucleotidyl transferase [Theobroma cacao]           91   2e-16
ref|XP_002524702.1| nuclease, putative [Ricinus communis] gi|223...    91   4e-16

>ref|YP_008992319.1| hypothetical protein Salmi_Mp055 (mitochondrion) [Salvia
           miltiorrhiza] gi|534292292|gb|AGU16584.1| hypothetical
           protein Salmi_Mp055 (mitochondrion) [Salvia
           miltiorrhiza]
          Length = 119

 Score =  129 bits (324), Expect = 8e-28
 Identities = 59/107 (55%), Positives = 74/107 (69%)
 Frame = +3

Query: 333 LGFAFEAELMAAMRAIHYAFEKGWTQLWLESDSVYVVELLRKRSTEVPWRHLSMWRYTLH 512
           +GFAFEAEL+  M A+  AF KGW  LW+ESDS+YVV LLR RS  VPW H + W YTLH
Sbjct: 1   MGFAFEAELVGVMMAVDIAFSKGWHSLWIESDSIYVVSLLRSRSMIVPWNHRNRWLYTLH 60

Query: 513 LLSQMNLVVSHIFREGNRAADILSKTSHEDTWWGMPSAAIISSLTQD 653
           L+ QMN+VV+HIFREGN  AD L+  + +  WW      I S++ +D
Sbjct: 61  LIRQMNIVVTHIFREGNHVADALANAAGDLKWWNSMPDFISSAVYRD 107


>ref|XP_004309966.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 197

 Score =  124 bits (312), Expect = 2e-26
 Identities = 67/186 (36%), Positives = 96/186 (51%), Gaps = 3/186 (1%)
 Frame = +3

Query: 105 MHNDQQDLFILRRLRVPGRPRQAPKIVQVTWQKPLPGWIKVNTDGSATGAPGNLTASXXX 284
           M N   +L IL R+ + GRP + PKIV+V W       +K+NTDG+A G+PG        
Sbjct: 1   MKNTVGELCILHRIGIKGRPSKVPKIVEVMWHVLSIYQVKLNTDGAARGSPGLAGFGGIF 60

Query: 285 XXXXXXXXXXXXESYGLGFAFEAELMAAMRAIHYAFEKGWTQLWLESDSVYVVELLRKRS 464
                        + G+  A EAEL A + AI  A ++GW  LW+ESDS  V+  L    
Sbjct: 61  RDHLGQVLCCFSGNLGIATALEAELQAVIHAIQMASQRGWRSLWIESDSTLVIHFLSSFQ 120

Query: 465 TEVPWRHLSMWRYTLHLLSQMNLVVSHIFREGNRAADILSKTSHEDT---WWGMPSAAII 635
            +VPWR  + W     +L+ M + VSHI+REGNR AD L+    ++    WW       I
Sbjct: 121 VDVPWRFTTEWFNCRTILTSMTVKVSHIYREGNRVADCLANFGADNAGVHWWDSYPPCAI 180

Query: 636 SSLTQD 653
           ++ ++D
Sbjct: 181 TAYSRD 186


>ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 197

 Score =  124 bits (312), Expect = 2e-26
 Identities = 67/186 (36%), Positives = 96/186 (51%), Gaps = 3/186 (1%)
 Frame = +3

Query: 105 MHNDQQDLFILRRLRVPGRPRQAPKIVQVTWQKPLPGWIKVNTDGSATGAPGNLTASXXX 284
           M N   +L IL R+ + GRP +APKIV+V W  P    +K+NTDG+A G+PG        
Sbjct: 1   MKNTVGELCILHRIGIKGRPSKAPKIVEVMWHVPSIYQVKLNTDGAARGSPGLAGFGGIF 60

Query: 285 XXXXXXXXXXXXESYGLGFAFEAELMAAMRAIHYAFEKGWTQLWLESDSVYVVELLRKRS 464
                        + G+  A EAEL   + AI  A ++GW  LW+ESDS  V+  L    
Sbjct: 61  RDHLGHVLGCFSGNLGIANALEAELQTVIHAIQMASQRGWHSLWIESDSTLVIHFLSSFQ 120

Query: 465 TEVPWRHLSMWRYTLHLLSQMNLVVSHIFREGNRAADILSKTSHEDT---WWGMPSAAII 635
            +VPWR  + W     +L+ M + VSHI+REGN  AD L+    ++    WW       I
Sbjct: 121 VDVPWRFTTEWFNCRTILTTMTVKVSHIYREGNSIADCLANFGADNAGVHWWDSCPPCAI 180

Query: 636 SSLTQD 653
           ++ ++D
Sbjct: 181 TAYSRD 186


>ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 364

 Score =  120 bits (302), Expect = 3e-25
 Identities = 71/209 (33%), Positives = 106/209 (50%), Gaps = 3/209 (1%)
 Frame = +3

Query: 3   RNDLTFNDKHWTVEAAILHLRVMIRKSSSLDQGCMHNDQQDLFILRRLRVPGRPRQAPKI 182
           RN +  ++    V+A    +   ++ +S L  GCM N   +L +L++  +  RP +AP+I
Sbjct: 149 RNKMRHDNCTIVVDAVRQLIMGHVKTASKLALGCMSNSLTELRVLKKFGLLCRPHRAPRI 208

Query: 183 VQVTWQKPLPGWIKVNTDGSATGAPGNLTASXXXXXXXXXXXXXXXESYGLGFAFEAELM 362
            +V W  PL GWIKVNTDG+     G                     +  +  + +AE+M
Sbjct: 209 TEVNWHPPLFGWIKVNTDGAWQKTTGKSGYGGIFRDFHGSFLGAFASNLEILNSVDAEVM 268

Query: 363 AAMRAIHYAFEKGWTQLWLESDSVYVVELLRKRSTEVPWRHLSMWRYTLHLLSQMNLVVS 542
           A ++AI  A+ + W  +WLE DS+ V+  L+     VPWR    W   LH +SQMN   S
Sbjct: 269 AVIQAIELAWVRDWEHIWLEVDSIIVLNFLQDPHL-VPWRLRVGWGNFLHRISQMNFRSS 327

Query: 543 HIFREGNRAADILSK---TSHEDTWWGMP 620
           HIFREGN+ AD L+    +    +WW  P
Sbjct: 328 HIFREGNQVADALANMGLSMSALSWWDEP 356


>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 872

 Score =  115 bits (287), Expect = 1e-23
 Identities = 70/220 (31%), Positives = 106/220 (48%), Gaps = 3/220 (1%)
 Frame = +3

Query: 3    RNDLTFNDKHWTVEAAILHLRVMIRKSSSLDQGCMHNDQQDLFILRRLRVPGRPRQAPKI 182
            RN + F+ + ++V      +   I+ SS L  G MHN   DL IL+      R R+ P++
Sbjct: 644  RNQIRFDSRTFSVAGVCRLVSRHIQASSRLATGHMHNTIHDLCILKSFGACCRSRRIPRM 703

Query: 183  VQVTWQKPLPGWIKVNTDGSATGAPGNLTASXXXXXXXXXXXXXXXESYGLGFAFEAELM 362
            V+V W  P  GWIK+N+DG+     G                        +  +  A++M
Sbjct: 704  VEVIWHPPSIGWIKINSDGAWKHEEGIGGFGAVFRYYKGQFVGAFASHIDIPSSIAAKVM 763

Query: 363  AAMRAIHYAFEKGWTQLWLESDSVYVVELLRKRSTEVPWRHLSMWRYTLHLLSQMNLVVS 542
              + AI  A+ + W  +WLE D   V++ +R  S  VPW+    W   L+ +S M    S
Sbjct: 764  VVITAIELAWVRDWKHVWLEVDFSTVLDYIRSPSL-VPWQLRVRWLNCLYRISTMTFKSS 822

Query: 543  HIFREGNRAADILSK---TSHEDTWWGMPSAAIISSLTQD 653
            HIFREGNR AD L+    +  E+ WW +P + I+S   +D
Sbjct: 823  HIFREGNRVADALANHGTSMSEEVWWDVPPSFILSYYERD 862


>ref|XP_004304923.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 209

 Score =  112 bits (280), Expect = 1e-22
 Identities = 67/180 (37%), Positives = 85/180 (47%), Gaps = 3/180 (1%)
 Frame = +3

Query: 123 DLFILRRLRVPGRPRQAPKIVQVTWQKPLPGWIKVNTDGSATGAPGNLTASXXXXXXXXX 302
           D  +L  L V  +  +AP+I  V WQ P   WIKVNTDG A G P               
Sbjct: 20  DARLLAFLGVAPKGGKAPRIQHVLWQPPFFPWIKVNTDGLAKGNPSPAACGGVFRDASGG 79

Query: 303 XXXXXXESYGLGFAFEAELMAAMRAIHYAFEKGWTQLWLESDSVYVVELLRKRSTEVPWR 482
                 +S G   +F +EL A + AI  A +KGW  LWLESDSV VV     +S   PW 
Sbjct: 80  FLGSFCQSLGWKTSFYSELYAVILAIEIAHDKGWVYLWLESDSVSVVACFSSKSFSPPWN 139

Query: 483 HLSMWRYTLHLLSQMNLVVSHIFREGNRAADILSK---TSHEDTWWGMPSAAIISSLTQD 653
               W   L ++ QMN   SHIFREGN  AD ++    ++   TW+  P   +   L  D
Sbjct: 140 LRVRWNNCLSIIRQMNFRCSHIFREGNMVADKMANLGLSNASFTWYDNPPTELHGFLQAD 199


>ref|XP_004308354.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 235

 Score =  110 bits (275), Expect = 4e-22
 Identities = 74/220 (33%), Positives = 96/220 (43%), Gaps = 3/220 (1%)
 Frame = +3

Query: 3   RNDLTFNDKHWTVEAAILHLRVMIRKSSSLDQGCMHNDQQDLFILRRLRVPGRPRQAPKI 182
           RN L F+++          +   IR+ S    G  +    D  +L  L V  +  +AP+I
Sbjct: 7   RNKLRFDNRPPNFYTMCCSIMAWIRQISLFAPG-HYKGVLDARLLASLGVASKGGKAPRI 65

Query: 183 VQVTWQKPLPGWIKVNTDGSATGAPGNLTASXXXXXXXXXXXXXXXESYGLGFAFEAELM 362
             V WQ P   WIKVNT+G A G PG                     S G   +F +EL 
Sbjct: 66  QHVLWQPPFFPWIKVNTNGLAKGNPGPAACGGVFRDASGGFLGSFCHSLGWKTSFYSELY 125

Query: 363 AAMRAIHYAFEKGWTQLWLESDSVYVVELLRKRSTEVPWRHLSMWRYTLHLLSQMNLVVS 542
             + AI  A +KGW  LWLESDSV VV     RS    W     W   L ++ QMN   S
Sbjct: 126 VVILAIEIAHDKGWVYLWLESDSVSVVACFSSRSFSPTWNLRVRWNNCLLIIRQMNFRYS 185

Query: 543 HIFREGNRAADILSKTSHED---TWWGMPSAAIISSLTQD 653
           HIFREGN  AD ++     +   TW+  P   +   L  D
Sbjct: 186 HIFREGNIVADKMANLGLSNVSFTWYDNPLTELHGFLQAD 225


>gb|EMJ14652.1| hypothetical protein PRUPE_ppa024777mg, partial [Prunus persica]
          Length = 465

 Score =  105 bits (261), Expect = 2e-20
 Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 3/218 (1%)
 Frame = +3

Query: 3   RNDLTFNDKHWTVEAAILHLRVMIRKSSSLDQGCMHNDQQDLFILRRLRVPGRPRQAPKI 182
           RN L F +K  TV +    +   +  SS L +G + N   DL I+R + V  RPR   KI
Sbjct: 242 RNKLRFEEKVSTVSSNCRTIINHVPASSPLARGHILNKVHDLCIIRSIGVHYRPRPNSKI 301

Query: 183 VQVTWQKPLPGWIKVNTDGSATGAPGNLTASXXXXXXXXXXXXXXXESYGLGFAFEAELM 362
           V+VTW  P  G++K+  DG+     G   +                 +  +     AE++
Sbjct: 302 VEVTWHPPCFGFVKIKIDGACKRDSGKAGSGGVFRNYQGHVLGAFSANLDVPSGVHAEVL 361

Query: 363 AAMRAIHYAFEKGWTQLWLESDSVYVVELLRKRSTEVPWRHLSMWRYTLHLLSQMNLVVS 542
           A ++AI  A+   W  +W+E+DS+ V +  R     VPWR    W+  L  L  M+  +S
Sbjct: 362 AVIKAIELAWLHAWHNIWIETDSLLVTKFFRSPHL-VPWRLRVDWQNCLLRLQHMSFKIS 420

Query: 543 HIFREGNRAADILSK---TSHEDTWWGMPSAAIISSLT 647
           HIFREGN   D L+         TWW    + I + L+
Sbjct: 421 HIFREGNHDVDALANHGALGSGLTWWDTAPSFIFALLS 458


>ref|XP_004301067.1| PREDICTED: uncharacterized protein LOC101309260 [Fragaria vesca
           subsp. vesca]
          Length = 209

 Score =  103 bits (258), Expect = 3e-20
 Identities = 65/198 (32%), Positives = 99/198 (50%), Gaps = 4/198 (2%)
 Frame = +3

Query: 72  IRKSSSLDQGCMHNDQQDLFILRRLRVPGRPRQAPKIVQVTWQKPLPGWIKVNTDGSATG 251
           +R SS L  GCM+N   +L +L+   VP + R+AP+I++V W  PL   IK+NT+G+   
Sbjct: 4   MRASSFLASGCMNNSVSELCVLKCFDVPCKSRRAPRIIEVNWIPPLFDCIKINTNGAFNH 63

Query: 252 APGNLTASXXXXXXXXXXXXXXXESYGLGF-AFEAELMAAMRAIHYAFEKGWTQLWLESD 428
           A G   A                 +  L     +AE+MA ++AI  A+ + W  +WLE D
Sbjct: 64  ASGK--AGFRGVFRNFKGEFIGVFACNLDIPCSDAEVMAVIKAIDLAWVREWRHIWLEVD 121

Query: 429 SVYVVELLRKRSTEVPWRHLSMWRYTLHLLSQMNLVVSHIFREGNRAADILSK---TSHE 599
           S  V+  +      +PWR    W   ++ +SQM    SHIFREGN+ AD L+    +S  
Sbjct: 122 SAIVLNFIHSPHL-IPWRFRVAWDNCMYRVSQMQFQCSHIFREGNQVADALANFDLSSSS 180

Query: 600 DTWWGMPSAAIISSLTQD 653
             +W      +++   QD
Sbjct: 181 LVYWDSIPQFLMNLCLQD 198


>gb|EXB74531.1| hypothetical protein L484_026228 [Morus notabilis]
          Length = 203

 Score =  103 bits (257), Expect = 4e-20
 Identities = 60/162 (37%), Positives = 82/162 (50%)
 Frame = +3

Query: 99  GCMHNDQQDLFILRRLRVPGRPRQAPKIVQVTWQKPLPGWIKVNTDGSATGAPGNLTASX 278
           G  +N   ++ IL +L V     ++PKI  V W  P  GW+KVN D SA GA   +    
Sbjct: 31  GYSYNSAFEIRILNKLYVRQNFPRSPKIFLVYWIPPPSGWVKVNIDSSAKGALDPIACGG 90

Query: 279 XXXXXXXXXXXXXXESYGLGFAFEAELMAAMRAIHYAFEKGWTQLWLESDSVYVVELLRK 458
                            G GFAFEAEL A + AI   FE GW +LWLESDS  ++ LL  
Sbjct: 91  IFRNARGFVCDCFSVFLGNGFAFEAELWAVINAISITFENGWHKLWLESDSSLIICLLSF 150

Query: 459 RSTEVPWRHLSMWRYTLHLLSQMNLVVSHIFREGNRAADILS 584
           +  +V W+  + W   + L  +M+   SH++RE N  AD L+
Sbjct: 151 KFLQVSWKLRNEWSRAVSLSIRMDFHFSHVYREINGCADKLA 192


>ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 409

 Score =  103 bits (256), Expect = 6e-20
 Identities = 67/200 (33%), Positives = 94/200 (47%), Gaps = 5/200 (2%)
 Frame = +3

Query: 36  TVEAAILHLRVM--IRKSSSLDQGCMHNDQQDLFILRRLRVPGRPRQAPKIVQVTWQKPL 209
           T+    +H  +M  ++  S L  GCM N    L +L++  +   P QA +I +V W  PL
Sbjct: 190 TIVVDAVHQLIMGHVKAVSKLASGCMSNSLTKLRVLKKFGLLCHPCQALRITKVNWHPPL 249

Query: 210 PGWIKVNTDGSATGAPGNLTASXXXXXXXXXXXXXXXESYGLGFAFEAELMAAMRAIHYA 389
            GWIKVNTDG+     G                     +  +  + +AE+MA ++AI  A
Sbjct: 250 FGWIKVNTDGAWQKTTGKSGYGGIFRDFHGSFLGAFASNLEIPNSVDAEVMAVIQAIELA 309

Query: 390 FEKGWTQLWLESDSVYVVELLRKRSTEVPWRHLSMWRYTLHLLSQMNLVVSHIFREGNRA 569
           + + W  + LE DS  V+  L      VPWR        LH +SQMN   SHIFREGN+ 
Sbjct: 310 WVRDWKHILLEVDSAIVLNFLHDPHL-VPWRLRVACGNCLHRISQMNFRSSHIFREGNQV 368

Query: 570 ADIL---SKTSHEDTWWGMP 620
           AD L     +    +WW  P
Sbjct: 369 ADTLVNMGLSMFALSWWDEP 388


>ref|XP_004304990.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 202

 Score =  100 bits (250), Expect = 3e-19
 Identities = 63/200 (31%), Positives = 95/200 (47%)
 Frame = +3

Query: 3   RNDLTFNDKHWTVEAAILHLRVMIRKSSSLDQGCMHNDQQDLFILRRLRVPGRPRQAPKI 182
           R DLT +   W     ++     IR +  +  G MHN  QDL I++      R  +AP++
Sbjct: 5   RPDLTISRSLWL--QFVISFWGYIRAAGWIANGPMHNLVQDLQIIKSFGAECRLGRAPRV 62

Query: 183 VQVTWQKPLPGWIKVNTDGSATGAPGNLTASXXXXXXXXXXXXXXXESYGLGFAFEAELM 362
           ++V W  P+ GW+K+N+DG+   A G                     +  +  +  AE++
Sbjct: 63  IEVVWHPPVIGWVKINSDGAWKHAEGVGGFGAIFRDFKCHVLGAFSSNIDIPSSVAAEVI 122

Query: 363 AAMRAIHYAFEKGWTQLWLESDSVYVVELLRKRSTEVPWRHLSMWRYTLHLLSQMNLVVS 542
           A + AI  A+ + W  +WLE DS  V++ LR     VPW     W   L  +S+M    S
Sbjct: 123 AVIVAIELAWVRDWKHIWLEVDSSLVLDYLRS-PLLVPWHLRVRWLNCLRCISKMIFRSS 181

Query: 543 HIFREGNRAADILSKTSHED 602
           HIFREGN+ AD L+     D
Sbjct: 182 HIFREGNKVADALANHGTRD 201


>ref|XP_004289115.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 210

 Score = 99.4 bits (246), Expect = 8e-19
 Identities = 57/171 (33%), Positives = 87/171 (50%)
 Frame = +3

Query: 72  IRKSSSLDQGCMHNDQQDLFILRRLRVPGRPRQAPKIVQVTWQKPLPGWIKVNTDGSATG 251
           +R SS L  GCM+N   +L +L+   VP + R+AP+I++V W  PL   IK+NTDG+   
Sbjct: 4   MRASSFLASGCMNNSISELCVLKCFDVPCKLRRAPRIIEVNWIPPLFDCIKINTDGAFNY 63

Query: 252 APGNLTASXXXXXXXXXXXXXXXESYGLGFAFEAELMAAMRAIHYAFEKGWTQLWLESDS 431
             G                     +  +  + +AE+M  ++AI  A+ + W  +WLE D 
Sbjct: 64  DSGKAGFGGVFRNFKGEFIGAFACNLHIPCSVDAEVMVVIKAIELAWIREWKHIWLEVDF 123

Query: 432 VYVVELLRKRSTEVPWRHLSMWRYTLHLLSQMNLVVSHIFREGNRAADILS 584
             V+  +      VPWR   +W   ++ +SQM    SHIFREGN+ A  L+
Sbjct: 124 AIVLNFIHSPHL-VPWRFRVVWDNCMYRVSQMQFRCSHIFREGNQVAYALA 173


>ref|XP_002516681.1| conserved hypothetical protein [Ricinus communis]
           gi|223544176|gb|EEF45700.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 180

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 59/149 (39%), Positives = 74/149 (49%)
 Frame = +3

Query: 132 ILRRLRVPGRPRQAPKIVQVTWQKPLPGWIKVNTDGSATGAPGNLTASXXXXXXXXXXXX 311
           I R L + G PR+ P ++ V           VNTDGSA GA G   A             
Sbjct: 30  IRRCLGINGSPRRTPAVMFV-----------VNTDGSALGALGPAGAGGLFRNPSGYVMG 78

Query: 312 XXXESYGLGFAFEAELMAAMRAIHYAFEKGWTQLWLESDSVYVVELLRKRSTEVPWRHLS 491
               S G   AF  EL +A  A+  A+E GW  LWLESDS+YVV L R + T V W    
Sbjct: 79  AFAFSLGTNCAFFVELNSASFAVCKAWEVGWLHLWLESDSIYVVHLFRTKGTSVLWELRL 138

Query: 492 MWRYTLHLLSQMNLVVSHIFREGNRAADI 578
            W   LH + QM+  VS++FREGN+  D+
Sbjct: 139 AWSRYLHFVQQMDFRVSYVFREGNKPTDM 167


>ref|XP_004289281.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 215

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 60/168 (35%), Positives = 76/168 (45%), Gaps = 4/168 (2%)
 Frame = +3

Query: 162 PRQAPKIVQ-VTWQKPLPGWIKVNTDGSATGAPGNLTASXXXXXXXXXXXXXXXESYGLG 338
           P +A K ++ V W  PL  WIK+NTDG A G PG  T                    G  
Sbjct: 38  PSRAQKRIRLVLWHPPLSPWIKLNTDGLAKGNPGPATCGGVFRDYQGHFIGGFSTPIGHH 97

Query: 339 FAFEAELMAAMRAIHYAFEKGWTQLWLESDSVYVVELLRKRSTEVPWRHLSMWRYTLHLL 518
             F +EL+A +  I  AF+ GW  +WLE DS  VVE   K S   PW+  ++W   +   
Sbjct: 98  NDFFSELLAVIIGIELAFQLGWQHVWLECDSTSVVECFSKSSFVPPWQLRTLWYNCVART 157

Query: 519 SQMNLVVSHIFREGNRAAD---ILSKTSHEDTWWGMPSAAIISSLTQD 653
             M+   SH+ REGN  AD    L  +S    W   P A II  L  D
Sbjct: 158 RSMSFFCSHVLREGNIVADRLVNLGMSSSSWIWHASPPAEIIHFLRMD 205


>gb|AGV40503.1| hypothetical protein [Phaseolus vulgaris]
          Length = 234

 Score = 92.8 bits (229), Expect = 8e-17
 Identities = 61/196 (31%), Positives = 87/196 (44%), Gaps = 2/196 (1%)
 Frame = +3

Query: 3   RNDLTFNDKHWTVEAA--ILHLRVMIRKSSSLDQGCMHNDQQDLFILRRLRVPGRPRQAP 176
           RN   F DK    +A   I  L  ++  SS   +  M ND  D  +++   +  R  +  
Sbjct: 6   RNYARFQDKIGVSKAISIIKDLTCLVGNSS---KASMKNDMLDFNVIKFFGIKTRSGKVL 62

Query: 177 KIVQVTWQKPLPGWIKVNTDGSATGAPGNLTASXXXXXXXXXXXXXXXESYGLGFAFEAE 356
           + + + W+ P PGW+K+NTDG+A G PG  T                     +  A  AE
Sbjct: 63  RPLPIRWEFPSPGWVKINTDGAARGYPGLATCGGIFRGSMGEFIGAFSAFLEVQTALVAE 122

Query: 357 LMAAMRAIHYAFEKGWTQLWLESDSVYVVELLRKRSTEVPWRHLSMWRYTLHLLSQMNLV 536
               + A+  A + G T +WLE DS  V      R T VPW   + W   L+    +   
Sbjct: 123 FYGVIHAMEEAQKMGLTNVWLECDSALVCAAFTAR-TNVPWMLQNRWNTCLNFCGTIRFR 181

Query: 537 VSHIFREGNRAADILS 584
           V+HIFREGN  AD L+
Sbjct: 182 VTHIFREGNACADKLA 197


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 1/199 (0%)
 Frame = +3

Query: 3    RNDLTFNDKHWTVEAAILHLRVMIRKSSSLDQG-CMHNDQQDLFILRRLRVPGRPRQAPK 179
            RN   F  +  ++++A   +  +I  S ++  G C+H+D     IL    V  R R+   
Sbjct: 953  RNAFRFQSQLQSIQSAKARIHSLIAMSGNVSTGKCLHSDSA---ILEEFSVSPRHRKYKD 1009

Query: 180  IVQVTWQKPLPGWIKVNTDGSATGAPGNLTASXXXXXXXXXXXXXXXESYGLGFAFEAEL 359
            I+ V W+ P P  +KVNTDGS  G  G                     + GL   F AE 
Sbjct: 1010 IILVLWKNPSPPLLKVNTDGSVVG--GLAACGGLFRDSSGSFLGAFSCNIGLASVFHAET 1067

Query: 360  MAAMRAIHYAFEKGWTQLWLESDSVYVVELLRKRSTEVPWRHLSMWRYTLHLLSQMNLVV 539
            +A + A+ +A   GW  LWLESDS   + ++   S+ V W   + W     L   + ++ 
Sbjct: 1068 LAFILALEHAAHHGWRNLWLESDSTSAL-MIFSNSSLVQWLLRNRWHNAQRL--GIQVIS 1124

Query: 540  SHIFREGNRAADILSKTSH 596
            SHI  EGNR AD L+   H
Sbjct: 1125 SHILHEGNRCADNLANMGH 1143


>ref|XP_004305144.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 183

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 55/158 (34%), Positives = 69/158 (43%), Gaps = 3/158 (1%)
 Frame = +3

Query: 189 VTWQKPLPGWIKVNTDGSATGAPGNLTASXXXXXXXXXXXXXXXESYGLGFAFEAELMAA 368
           V W  PL  WIK+NTDG A G  G                       G   AF +EL+A 
Sbjct: 16  VLWHPPLSPWIKLNTDGLAKGNSGPAACGGVFRDYQGHFIGGFSTPIGHHNAFFSELLAV 75

Query: 369 MRAIHYAFEKGWTQLWLESDSVYVVELLRKRSTEVPWRHLSMWRYTLHLLSQMNLVVSHI 548
           +  I   F+ GW  +WLE DS  VVE   K S   PW+  ++W      +  M+   SH+
Sbjct: 76  IIGIELTFQLGWQHVWLECDSTSVVECFSKSSFVPPWQLRTLWYNCAARIRSMSFFCSHV 135

Query: 549 FREGNRAADILSK---TSHEDTWWGMPSAAIISSLTQD 653
            REGN  AD L+    +S    W   P A II  L  D
Sbjct: 136 LREGNTVADRLANLGMSSSSWIWHASPPAEIIPFLRMD 173


>gb|EOY28460.1| Polynucleotidyl transferase [Theobroma cacao]
          Length = 285

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 5/162 (3%)
 Frame = +3

Query: 183 VQVTWQKPLPGWIKVNTDGSATGAPGNLTASXXXXXXXXXXXXXXXESYGLGFAFEAELM 362
           + V+W+KP  GW K+N DGS  G  G  +                 ES G   +  AEL 
Sbjct: 31  IPVSWEKPEIGWTKLNFDGSCKGRGGKASIGGVFRNHKAEFLLGYAESIGRSTSTIAELA 90

Query: 363 AAMRAIHYAFEKGWTQLWLESDSVYVVE-LLRKRSTEVPWRHLSMWRYTLHLLSQMNLVV 539
           A  R +    E GWT +WLE D+  +V+ ++++R  +       +    L +    N +V
Sbjct: 91  ALRRGLELVLENGWTDVWLEGDAKTLVDVIVQRRQVKCAELQRHVSHINLIIPELNNCIV 150

Query: 540 SHIFREGNRAADILSKTSHE----DTWWGMPSAAIISSLTQD 653
           +HI+REGNRAAD L++  H+      WW +P   ++  + +D
Sbjct: 151 THIYREGNRAADKLAQIGHQLKKPQIWWHIPPNEVLPIVHED 192


>ref|XP_002524702.1| nuclease, putative [Ricinus communis] gi|223536063|gb|EEF37721.1|
           nuclease, putative [Ricinus communis]
          Length = 201

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
 Frame = +3

Query: 183 VQVTWQKPLPGWIKVNTDGSATGAPGNLTASXXXXXXXXXXXXXXXESYGLGFAFEAELM 362
           + V W+KP  GW K+N DGS  G  G  +                 ES G   +  AEL 
Sbjct: 30  IPVAWEKPQVGWTKLNFDGSCKGREGKGSIGGVFRNHKAEFLLGYAESIGRSTSTIAELA 89

Query: 363 AAMRAIHYAFEKGWTQLWLESDSVYVVELL---RKRSTEVPWRHLSMWRYTLHLLSQMNL 533
           A  R +    E GW+ +WLE D+  ++E++   RK       RH+S     +  L   N 
Sbjct: 90  ALRRGLELVLENGWSNVWLEGDAKTLLEIIVKRRKVRCAQMQRHVSDINLIIPELD--NC 147

Query: 534 VVSHIFREGNRAADILSKTSHE----DTWWGMPSAAIISSLTQD 653
           +VSH++REGNRAAD L++  H+      WW +P   ++  + +D
Sbjct: 148 IVSHVYREGNRAADKLAQIGHQLQKPKIWWHIPPDDVLPIVHED 191