BLASTX nr result

ID: Rehmannia26_contig00015685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00015685
         (909 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517604.1| polypeptide deformylase, putative [Ricinus c...   382   e-103
ref|XP_002298107.2| PEPTIDE DEFORMYLASE 1A family protein [Popul...   379   e-102
dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]                         372   e-101
ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloropla...   367   3e-99
ref|XP_006359723.1| PREDICTED: peptide deformylase 1A, chloropla...   365   1e-98
ref|XP_004152208.1| PREDICTED: LOW QUALITY PROTEIN: peptide defo...   365   2e-98
ref|NP_001234703.1| peptide deformylase 1A, chloroplastic [Solan...   363   4e-98
gb|EOY26497.1| Peptide deformylase 1A [Theobroma cacao]               363   5e-98
gb|EXC41717.1| Peptide deformylase 1A [Morus notabilis]               363   6e-98
ref|XP_002281834.1| PREDICTED: peptide deformylase 1A, chloropla...   363   6e-98
ref|XP_004302968.1| PREDICTED: peptide deformylase 1A, chloropla...   362   1e-97
gb|EMJ18576.1| hypothetical protein PRUPE_ppa023556mg, partial [...   356   6e-96
ref|XP_006427235.1| hypothetical protein CICLE_v10026288mg [Citr...   350   3e-94
ref|XP_006416911.1| hypothetical protein EUTSA_v10008467mg [Eutr...   348   2e-93
ref|XP_006305911.1| hypothetical protein CARUB_v10011124mg [Caps...   347   4e-93
ref|XP_003531707.1| PREDICTED: peptide deformylase 1A, chloropla...   345   1e-92
ref|XP_006465354.1| PREDICTED: peptide deformylase 1A, chloropla...   345   2e-92
ref|XP_004506907.1| PREDICTED: peptide deformylase 1A, chloropla...   343   5e-92
gb|AAD39667.1|AC007591_32 Simalar to gi|4377403 Polypeptide Defo...   340   3e-91
ref|NP_563974.1| peptide deformylase 1A [Arabidopsis thaliana] g...   340   3e-91

>ref|XP_002517604.1| polypeptide deformylase, putative [Ricinus communis]
           gi|223543236|gb|EEF44768.1| polypeptide deformylase,
           putative [Ricinus communis]
          Length = 266

 Score =  382 bits (981), Expect = e-103
 Identities = 195/267 (73%), Positives = 222/267 (83%), Gaps = 4/267 (1%)
 Frame = +1

Query: 22  MESIQRITHRFFPITLTQKCFKTIPRTPL--LTR-PVSWPKQPVLRPVTINSRRNHSSGL 192
           ME++ R + R  PI+L  KC K     P+  LTR P+S P      P +I +R++ SS  
Sbjct: 1   METLHRFSLRLLPISLADKCLKPTKHHPIYRLTRIPISKPDFRTTIPYSI-TRKSLSSSS 59

Query: 193 ATRAGWLLGMGE-KKSALPETVKAGDPVLHEPAQEVRPEEIGSERIQKIIDDMVKVMRKA 369
             +AGWLLG+GE KK +LP+ VKAGDPVLHEPA+EV P+EIGSERIQKIIDDMVKVMR+A
Sbjct: 60  IAKAGWLLGLGENKKMSLPDIVKAGDPVLHEPAREVDPDEIGSERIQKIIDDMVKVMRRA 119

Query: 370 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKQETKAQDRRPFDLLVVINPKLKRKGDKTA 549
           PGVGLAAPQIG+PLRIIVLEDT EYI YAPK+ETKAQDRRPFDLLV++NPKLK+KG++TA
Sbjct: 120 PGVGLAAPQIGVPLRIIVLEDTTEYIGYAPKEETKAQDRRPFDLLVILNPKLKKKGNRTA 179

Query: 550 FFFEGCLSVDGFRAVVERHLEVEVTGFDREGQAIKVDASGWQARIFQHECDHLDGTLYVD 729
            FFEGCLSVDGFRAVVER LEVEV+G DR GQ IKVDASGWQARI QHECDHLDGTLYVD
Sbjct: 180 LFFEGCLSVDGFRAVVERSLEVEVSGLDRSGQPIKVDASGWQARILQHECDHLDGTLYVD 239

Query: 730 KMVPRTFRTVNNLDLPLAIGCPKLGVR 810
           KMVPRTFRTV+NLDLPLA GCP LG +
Sbjct: 240 KMVPRTFRTVDNLDLPLAEGCPNLGAQ 266


>ref|XP_002298107.2| PEPTIDE DEFORMYLASE 1A family protein [Populus trichocarpa]
           gi|550347526|gb|EEE82912.2| PEPTIDE DEFORMYLASE 1A
           family protein [Populus trichocarpa]
          Length = 299

 Score =  379 bits (972), Expect = e-102
 Identities = 194/267 (72%), Positives = 220/267 (82%), Gaps = 4/267 (1%)
 Frame = +1

Query: 22  MESIQRITHRFFPITLTQKCFK--TIPRTPLLTRPVSWPKQPVLRPVT-INSRRNHSSGL 192
           MES+ R + R  PI+L +KCFK  T+P     TR +  PK   + P     +R++ SS  
Sbjct: 34  MESLHRCSLRLLPISLAEKCFKPTTLPTIFRFTRMLV-PKPEFMNPNPHFTTRKSLSSSH 92

Query: 193 ATRAGWLLGMGEKK-SALPETVKAGDPVLHEPAQEVRPEEIGSERIQKIIDDMVKVMRKA 369
             +AGWLLGMGEKK ++LP+ VKAGDPVLHEPA+EV P+EIGSERIQKIIDDMVKVMR A
Sbjct: 93  TAKAGWLLGMGEKKKTSLPDIVKAGDPVLHEPAREVDPKEIGSERIQKIIDDMVKVMRMA 152

Query: 370 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKQETKAQDRRPFDLLVVINPKLKRKGDKTA 549
           PGVGLAAPQIGIPLRIIVLEDT EYI YAPK ETKAQDRRPFDLLV++NPKLK+K ++TA
Sbjct: 153 PGVGLAAPQIGIPLRIIVLEDTAEYIGYAPKNETKAQDRRPFDLLVIVNPKLKKKSNRTA 212

Query: 550 FFFEGCLSVDGFRAVVERHLEVEVTGFDREGQAIKVDASGWQARIFQHECDHLDGTLYVD 729
           FFFEGCLSVDGFRA+VERHL+VEV G  R+GQ IKVDASGWQARI QHECDHL+GTLYVD
Sbjct: 213 FFFEGCLSVDGFRAIVERHLDVEVIGLSRDGQPIKVDASGWQARILQHECDHLEGTLYVD 272

Query: 730 KMVPRTFRTVNNLDLPLAIGCPKLGVR 810
           KMVPRTFRTV NLDLPLA GCP+ G R
Sbjct: 273 KMVPRTFRTVENLDLPLAEGCPEPGSR 299


>dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]
          Length = 274

 Score =  372 bits (956), Expect = e-101
 Identities = 186/274 (67%), Positives = 218/274 (79%), Gaps = 11/274 (4%)
 Frame = +1

Query: 22  MESIQRITHRFFPITLTQKCFKT----IPRTPLLTRPVSWPKQPVLRPVTINSR------ 171
           ME++QR + R  PI+L +KC       +PR   L     + +  + +P  ++S       
Sbjct: 1   METLQRFSLRLLPISLAEKCLNPYTHGVPRAVTLAPLSRFARMSISKPEFLSSNPKSTFH 60

Query: 172 RNHSSGLATRAGWLLGMGEKK-SALPETVKAGDPVLHEPAQEVRPEEIGSERIQKIIDDM 348
            + SS L  +AGW LG+GEKK ++ P+ VKAGDPVLHEPA+EV PEEIGSERIQKIIDDM
Sbjct: 61  NSFSSSLTAKAGWFLGLGEKKKTSFPDIVKAGDPVLHEPAREVDPEEIGSERIQKIIDDM 120

Query: 349 VKVMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKQETKAQDRRPFDLLVVINPKLK 528
           +K MR APGVGLAAPQIG+PLRIIVLEDTKEYI YAPK+ETKAQDRRPFDLLV++NPKL+
Sbjct: 121 IKAMRMAPGVGLAAPQIGVPLRIIVLEDTKEYIRYAPKEETKAQDRRPFDLLVILNPKLE 180

Query: 529 RKGDKTAFFFEGCLSVDGFRAVVERHLEVEVTGFDREGQAIKVDASGWQARIFQHECDHL 708
           +K ++TAFFFEGCLSVDGFRAVVER+L+VEVTG  R GQ IKV+ASGWQARI QHECDHL
Sbjct: 181 KKSNRTAFFFEGCLSVDGFRAVVERYLDVEVTGLSRYGQPIKVNASGWQARILQHECDHL 240

Query: 709 DGTLYVDKMVPRTFRTVNNLDLPLAIGCPKLGVR 810
           DGTLYVDKMVPRTFRT+ NLDLPLA GCP LG R
Sbjct: 241 DGTLYVDKMVPRTFRTIENLDLPLAEGCPNLGAR 274


>ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform 1
           [Cucumis sativus]
          Length = 267

 Score =  367 bits (942), Expect = 3e-99
 Identities = 191/269 (71%), Positives = 213/269 (79%), Gaps = 6/269 (2%)
 Frame = +1

Query: 22  MESIQRITHRFFPITLTQKCFKTIPRTP----LLTRPVSW-PKQPVLRPVTINSRRNHSS 186
           ME+I R + R FPI+L ++C K     P    L+ RP+S  P  P   PV      + SS
Sbjct: 1   MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKLIHRPISSSPNIPKFIPVP--KTYSSSS 58

Query: 187 GLATRAGWLLGMGE-KKSALPETVKAGDPVLHEPAQEVRPEEIGSERIQKIIDDMVKVMR 363
               +AGW LG+GE KK +LP  VKAGDPVLHEPA+EV P+EIGSE++QKIIDDM+  MR
Sbjct: 59  TSIAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMR 118

Query: 364 KAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKQETKAQDRRPFDLLVVINPKLKRKGDK 543
           KAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPK+E KAQDRR FDLLV+INPKLK K +K
Sbjct: 119 KAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNK 178

Query: 544 TAFFFEGCLSVDGFRAVVERHLEVEVTGFDREGQAIKVDASGWQARIFQHECDHLDGTLY 723
           TA FFEGCLSVDGFRAVVER+L+VEV GFDR+G  IKVDASGWQARI QHECDHLDGTLY
Sbjct: 179 TALFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLY 238

Query: 724 VDKMVPRTFRTVNNLDLPLAIGCPKLGVR 810
           VDKMVPRTFRT  NL LPLA GCPKLG R
Sbjct: 239 VDKMVPRTFRTTENLTLPLAEGCPKLGAR 267


>ref|XP_006359723.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform X1
           [Solanum tuberosum] gi|565387901|ref|XP_006359724.1|
           PREDICTED: peptide deformylase 1A, chloroplastic-like
           isoform X2 [Solanum tuberosum]
           gi|565387903|ref|XP_006359725.1| PREDICTED: peptide
           deformylase 1A, chloroplastic-like isoform X3 [Solanum
           tuberosum] gi|565387905|ref|XP_006359726.1| PREDICTED:
           peptide deformylase 1A, chloroplastic-like isoform X4
           [Solanum tuberosum] gi|565387907|ref|XP_006359727.1|
           PREDICTED: peptide deformylase 1A, chloroplastic-like
           isoform X5 [Solanum tuberosum]
          Length = 276

 Score =  365 bits (937), Expect = 1e-98
 Identities = 196/278 (70%), Positives = 216/278 (77%), Gaps = 16/278 (5%)
 Frame = +1

Query: 22  MESIQRITHRFFPITLTQKCFKTIPRTPLLT----------RPV--SWPKQPVLRP---V 156
           ME   R+  R   +  T K  K+  +T  LT          RPV   W  Q   RP    
Sbjct: 1   MERFPRLAQRVLSVPFTPKYLKSCKKTNPLTSHLMQLRGSQRPVFIQWNLQG--RPSVCT 58

Query: 157 TINSRRNHSSGLATRAGWLLGMGEKKS-ALPETVKAGDPVLHEPAQEVRPEEIGSERIQK 333
            + S+RN+SS  A RAGW LG+GEKK   +P+ VKAGDPVLHEP+Q+V  EEIGSERIQK
Sbjct: 59  DLVSKRNYSSTTA-RAGWFLGLGEKKKQVMPDIVKAGDPVLHEPSQDVPLEEIGSERIQK 117

Query: 334 IIDDMVKVMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKQETKAQDRRPFDLLVVI 513
           IID+MVKVMR APGVGLAAPQIGIPL+IIVLEDT EYISYAPK ETKAQDRRPFDLLV+I
Sbjct: 118 IIDEMVKVMRNAPGVGLAAPQIGIPLKIIVLEDTNEYISYAPKDETKAQDRRPFDLLVII 177

Query: 514 NPKLKRKGDKTAFFFEGCLSVDGFRAVVERHLEVEVTGFDREGQAIKVDASGWQARIFQH 693
           NPKLK+KG+KTA FFEGCLSVDGFRAVVERHL+VEVTG DR G+AIKVDASGWQARI QH
Sbjct: 178 NPKLKKKGNKTALFFEGCLSVDGFRAVVERHLQVEVTGLDRNGKAIKVDASGWQARILQH 237

Query: 694 ECDHLDGTLYVDKMVPRTFRTVNNLDLPLAIGCPKLGV 807
           E DHLDGT+YVDKM PRTFRTV NLDLPLA GCPKLGV
Sbjct: 238 EYDHLDGTIYVDKMFPRTFRTVENLDLPLAAGCPKLGV 275


>ref|XP_004152208.1| PREDICTED: LOW QUALITY PROTEIN: peptide deformylase 1A,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  365 bits (936), Expect = 2e-98
 Identities = 190/269 (70%), Positives = 212/269 (78%), Gaps = 6/269 (2%)
 Frame = +1

Query: 22  MESIQRITHRFFPITLTQKCFKTIPRTP----LLTRPVSW-PKQPVLRPVTINSRRNHSS 186
           ME+I R + R FPI+L ++C K     P    L+ RP+S  P  P   PV      + SS
Sbjct: 1   MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKLIHRPISSSPNIPKFIPVP--KTYSSSS 58

Query: 187 GLATRAGWLLGMGE-KKSALPETVKAGDPVLHEPAQEVRPEEIGSERIQKIIDDMVKVMR 363
               +AGW LG+GE KK +LP  VKAGDPVLHEPA+EV P+EIGSE++ KIIDDM+  MR
Sbjct: 59  TSIAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVXKIIDDMILTMR 118

Query: 364 KAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKQETKAQDRRPFDLLVVINPKLKRKGDK 543
           KAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPK+E KAQDRR FDLLV+INPKLK K +K
Sbjct: 119 KAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNK 178

Query: 544 TAFFFEGCLSVDGFRAVVERHLEVEVTGFDREGQAIKVDASGWQARIFQHECDHLDGTLY 723
           TA FFEGCLSVDGFRAVVER+L+VEV GFDR+G  IKVDASGWQARI QHECDHLDGTLY
Sbjct: 179 TALFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLY 238

Query: 724 VDKMVPRTFRTVNNLDLPLAIGCPKLGVR 810
           VDKMVPRTFRT  NL LPLA GCPKLG R
Sbjct: 239 VDKMVPRTFRTTENLTLPLAEGCPKLGAR 267


>ref|NP_001234703.1| peptide deformylase 1A, chloroplastic [Solanum lycopersicum]
           gi|17433049|sp|Q9FUZ0.1|DEF1A_SOLLC RecName:
           Full=Peptide deformylase 1A, chloroplastic; Short=PDF
           1A; AltName: Full=Polypeptide deformylase; Flags:
           Precursor gi|11320968|gb|AAG33981.1|AF271258_1 peptide
           deformylase-like protein [Solanum lycopersicum]
          Length = 277

 Score =  363 bits (933), Expect = 4e-98
 Identities = 194/278 (69%), Positives = 216/278 (77%), Gaps = 16/278 (5%)
 Frame = +1

Query: 22  MESIQRITHRFFPITLTQKCFKTIPRTPLLT----------RPV--SWPKQPVLRP---V 156
           ME   R+  R   +  T K  K+  +T  LT          RP+   W  Q   RP    
Sbjct: 2   MERFPRLAQRVLSVPFTPKYLKSCKKTNPLTSHLMQLRGSQRPIFIQWNLQG--RPSVCT 59

Query: 157 TINSRRNHSSGLATRAGWLLGMGEKKS-ALPETVKAGDPVLHEPAQEVRPEEIGSERIQK 333
            + S++N+SS  A RAGW LG+GEKK  A+P+ VKAGDPVLHEP+Q++  EEIGSERIQK
Sbjct: 60  DLISKKNYSSATA-RAGWFLGLGEKKKQAMPDIVKAGDPVLHEPSQDIPLEEIGSERIQK 118

Query: 334 IIDDMVKVMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKQETKAQDRRPFDLLVVI 513
           II++MVKVMR APGVGLAAPQIGIPL+IIVLEDT EYISYAPK ETKAQDRRPF LLV+I
Sbjct: 119 IIEEMVKVMRNAPGVGLAAPQIGIPLKIIVLEDTNEYISYAPKDETKAQDRRPFGLLVII 178

Query: 514 NPKLKRKGDKTAFFFEGCLSVDGFRAVVERHLEVEVTGFDREGQAIKVDASGWQARIFQH 693
           NPKLK+KG+KTA FFEGCLSVDGFRAVVERHLEVEVTG DR G+AIKVDASGWQARI QH
Sbjct: 179 NPKLKKKGNKTALFFEGCLSVDGFRAVVERHLEVEVTGLDRNGKAIKVDASGWQARILQH 238

Query: 694 ECDHLDGTLYVDKMVPRTFRTVNNLDLPLAIGCPKLGV 807
           E DHLDGTLYVDKM PRTFRTV NLDLPLA GCPKLGV
Sbjct: 239 EYDHLDGTLYVDKMAPRTFRTVENLDLPLAAGCPKLGV 276


>gb|EOY26497.1| Peptide deformylase 1A [Theobroma cacao]
          Length = 269

 Score =  363 bits (932), Expect = 5e-98
 Identities = 184/265 (69%), Positives = 210/265 (79%), Gaps = 2/265 (0%)
 Frame = +1

Query: 22  MESIQRITHRFFPITLTQKCFKTIPRTPLLTRPVSWPKQPVLRPVT-INSRRNHSSGLAT 198
           ME + R + R  P+TL+    +  P       P + P  P   P    +S R  SS    
Sbjct: 7   MEVLHRFSFRLLPVTLSLNTARLAPLYLSTQIPFNGPAFP--NPTAHFSSWRPFSSSAVA 64

Query: 199 RAGWLLGMGEKK-SALPETVKAGDPVLHEPAQEVRPEEIGSERIQKIIDDMVKVMRKAPG 375
           +AGW LG+GEKK ++LPE VKAGDPVLHEPA+E+ P+EIGSE IQKIIDDMV+VMR APG
Sbjct: 65  KAGWFLGLGEKKKTSLPEIVKAGDPVLHEPAREIDPDEIGSELIQKIIDDMVRVMRMAPG 124

Query: 376 VGLAAPQIGIPLRIIVLEDTKEYISYAPKQETKAQDRRPFDLLVVINPKLKRKGDKTAFF 555
           VGLAAPQIG+PL+IIVLEDT EYISYAPK+ETKAQDR PFDLLV++NPKLK+K ++TA F
Sbjct: 125 VGLAAPQIGVPLKIIVLEDTTEYISYAPKEETKAQDRHPFDLLVIVNPKLKKKSNRTALF 184

Query: 556 FEGCLSVDGFRAVVERHLEVEVTGFDREGQAIKVDASGWQARIFQHECDHLDGTLYVDKM 735
           FEGCLSV+GFRAVVERHL+VEVTG  R+GQ IKVDASGWQARI QHECDHLDGTLYVDKM
Sbjct: 185 FEGCLSVEGFRAVVERHLDVEVTGLGRDGQPIKVDASGWQARILQHECDHLDGTLYVDKM 244

Query: 736 VPRTFRTVNNLDLPLAIGCPKLGVR 810
           VPRTFR V NLDLPLA GCPKLG R
Sbjct: 245 VPRTFRAVQNLDLPLAEGCPKLGAR 269


>gb|EXC41717.1| Peptide deformylase 1A [Morus notabilis]
          Length = 273

 Score =  363 bits (931), Expect = 6e-98
 Identities = 185/270 (68%), Positives = 215/270 (79%), Gaps = 7/270 (2%)
 Frame = +1

Query: 22  MESIQRITHRFFPITLTQKCFKTIPRTPLLTR---PVSW---PKQPVLRPVTINSRRNHS 183
           ME+  R + R FP+  +++  +    TP+L     P+     PKQP     T     +  
Sbjct: 4   METAHRFSLRLFPLLQSERSLRPSILTPILRNCRTPIFGHLDPKQPPNAIFTTRRTYSPR 63

Query: 184 SGLATRAGWLLGMGEKK-SALPETVKAGDPVLHEPAQEVRPEEIGSERIQKIIDDMVKVM 360
           S    RAGWLLG+GEKK ++LP+ VKAGDPVLHEPA+EV P EIGS++IQKIIDDM+  M
Sbjct: 64  SPSMARAGWLLGLGEKKKTSLPDIVKAGDPVLHEPAREVEPGEIGSDKIQKIIDDMISSM 123

Query: 361 RKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKQETKAQDRRPFDLLVVINPKLKRKGD 540
           RKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPK+E KAQDRRPFDLLV+INPKLK+K +
Sbjct: 124 RKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKKKSN 183

Query: 541 KTAFFFEGCLSVDGFRAVVERHLEVEVTGFDREGQAIKVDASGWQARIFQHECDHLDGTL 720
           KTA FFEGCLSVDGFRAVVER+L+VEV G DR G  +K++ASGWQARI QHECDHL+GT+
Sbjct: 184 KTALFFEGCLSVDGFRAVVERYLDVEVDGLDRYGNPVKINASGWQARILQHECDHLEGTI 243

Query: 721 YVDKMVPRTFRTVNNLDLPLAIGCPKLGVR 810
           YVDKMVPRTFRTV+NLDLPLA GCPKLGVR
Sbjct: 244 YVDKMVPRTFRTVDNLDLPLADGCPKLGVR 273


>ref|XP_002281834.1| PREDICTED: peptide deformylase 1A, chloroplastic [Vitis vinifera]
           gi|297743418|emb|CBI36285.3| unnamed protein product
           [Vitis vinifera]
          Length = 277

 Score =  363 bits (931), Expect = 6e-98
 Identities = 187/277 (67%), Positives = 209/277 (75%), Gaps = 14/277 (5%)
 Frame = +1

Query: 22  MESIQRITHRFFPITLTQKC--------FKTIPRTPLLTRPVSWPKQPVLRPVTINSRR- 174
           MESI R + R  P  L + C        F+ IP        +   K     P  I S R 
Sbjct: 1   MESISRFSQRLLPTCLAENCLINPITSPFRLIPSLQFHPTLIPTSKPGPSDPNRIFSTRK 60

Query: 175 -----NHSSGLATRAGWLLGMGEKKSALPETVKAGDPVLHEPAQEVRPEEIGSERIQKII 339
                + SS L   AGW+LG+G+KK ALPE VKAGDPVLHE AQEV P EIGS+RIQKII
Sbjct: 61  TYRPSSSSSTLIASAGWILGLGDKKPALPEIVKAGDPVLHESAQEVEPGEIGSDRIQKII 120

Query: 340 DDMVKVMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKQETKAQDRRPFDLLVVINP 519
           DDM+K MR APGVGLAAPQIGIPLRIIVLEDTKEYISY  K   KAQ+RRPFDLLV++NP
Sbjct: 121 DDMIKAMRTAPGVGLAAPQIGIPLRIIVLEDTKEYISYDRKDVIKAQERRPFDLLVILNP 180

Query: 520 KLKRKGDKTAFFFEGCLSVDGFRAVVERHLEVEVTGFDREGQAIKVDASGWQARIFQHEC 699
           KL++KG++TAFFFEGCLSVDGFRAVVERHL+VEVTG  R G+ IKVDASGW+ARI QHEC
Sbjct: 181 KLRKKGNRTAFFFEGCLSVDGFRAVVERHLQVEVTGLSRNGKPIKVDASGWKARILQHEC 240

Query: 700 DHLDGTLYVDKMVPRTFRTVNNLDLPLAIGCPKLGVR 810
           DHLDGTLYVDKMVPRTFRTV N+DLPLA+GCPKLG R
Sbjct: 241 DHLDGTLYVDKMVPRTFRTVQNIDLPLAVGCPKLGAR 277


>ref|XP_004302968.1| PREDICTED: peptide deformylase 1A, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 268

 Score =  362 bits (929), Expect = 1e-97
 Identities = 187/271 (69%), Positives = 219/271 (80%), Gaps = 8/271 (2%)
 Frame = +1

Query: 22  MESIQRITHRFFPITLTQKCFKTIPRTPLLTR---PVSWPKQPVLRPV-TINSRRNHSSG 189
           ME++ R T R  PI+L+  C      TP   R   P+S P   +L P    ++R+  SS 
Sbjct: 1   METLHRST-RLLPISLSALCLTRPTTTPQFQRFRLPISTPG--ILNPKPAFHTRKRFSSS 57

Query: 190 LA--TRAGWLLGMGEKKS--ALPETVKAGDPVLHEPAQEVRPEEIGSERIQKIIDDMVKV 357
            +   +AGW LG+GEKK   +LP+ VKAGDPVLHEPA++V  E+IGSERIQKIIDDMVKV
Sbjct: 58  PSPVAKAGWFLGLGEKKKGLSLPDIVKAGDPVLHEPARDVEVEDIGSERIQKIIDDMVKV 117

Query: 358 MRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKQETKAQDRRPFDLLVVINPKLKRKG 537
           MRKAPGVGLAAPQIG+PLRIIVLEDTKEYISYAPK E K QDRRPFDLLV+INPKL++K 
Sbjct: 118 MRKAPGVGLAAPQIGVPLRIIVLEDTKEYISYAPKNEIKVQDRRPFDLLVIINPKLQKKS 177

Query: 538 DKTAFFFEGCLSVDGFRAVVERHLEVEVTGFDREGQAIKVDASGWQARIFQHECDHLDGT 717
           ++TA FFEGCLSVDGFRAVVER+L+VEV+GFDR+GQ IK+DASGWQARI QHECDH++GT
Sbjct: 178 NRTAVFFEGCLSVDGFRAVVERYLDVEVSGFDRDGQPIKIDASGWQARILQHECDHMEGT 237

Query: 718 LYVDKMVPRTFRTVNNLDLPLAIGCPKLGVR 810
           +YVDKM+PRTFRTV NLDLPLA GCPKLG R
Sbjct: 238 IYVDKMLPRTFRTVENLDLPLAEGCPKLGSR 268


>gb|EMJ18576.1| hypothetical protein PRUPE_ppa023556mg, partial [Prunus persica]
          Length = 249

 Score =  356 bits (914), Expect = 6e-96
 Identities = 175/219 (79%), Positives = 200/219 (91%), Gaps = 4/219 (1%)
 Frame = +1

Query: 166 SRRNHSSGLA--TRAGWLLGMGEKK--SALPETVKAGDPVLHEPAQEVRPEEIGSERIQK 333
           +R+++SSG +   +AGWLLG+GEKK  ++LP+ VKAGDPVLHEPA++V P +IGSERIQK
Sbjct: 31  TRKSYSSGSSPVAKAGWLLGLGEKKKSTSLPDIVKAGDPVLHEPARDVEPGDIGSERIQK 90

Query: 334 IIDDMVKVMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKQETKAQDRRPFDLLVVI 513
           IIDDMVKVMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPK+ET AQDRRPFDLLV++
Sbjct: 91  IIDDMVKVMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEETAAQDRRPFDLLVIL 150

Query: 514 NPKLKRKGDKTAFFFEGCLSVDGFRAVVERHLEVEVTGFDREGQAIKVDASGWQARIFQH 693
           NPKL++K ++TA FFEGCLSVDGFRAVVER+L+VEV+GFDR GQ IK+ ASGWQARI QH
Sbjct: 151 NPKLQKKSNRTAVFFEGCLSVDGFRAVVERNLDVEVSGFDRNGQPIKISASGWQARILQH 210

Query: 694 ECDHLDGTLYVDKMVPRTFRTVNNLDLPLAIGCPKLGVR 810
           ECDHL+GTLYVDKMVPRTFRTV NLDLPLA GCPKLG R
Sbjct: 211 ECDHLEGTLYVDKMVPRTFRTVENLDLPLAEGCPKLGGR 249


>ref|XP_006427235.1| hypothetical protein CICLE_v10026288mg [Citrus clementina]
           gi|557529225|gb|ESR40475.1| hypothetical protein
           CICLE_v10026288mg [Citrus clementina]
          Length = 266

 Score =  350 bits (899), Expect = 3e-94
 Identities = 182/265 (68%), Positives = 212/265 (80%), Gaps = 3/265 (1%)
 Frame = +1

Query: 22  MESIQRITHRFFPITLTQKCFKTIPRTPLLTRP-VSWPKQPVLRPVTINSRRN-HSSGLA 195
           ME+I R +    PI L ++  K+ P     TR  VS P       VT +  R   ++   
Sbjct: 1   MEAIHRFSVCHLPICLAKRHIKSAPIILCPTRKLVSSPD--FSNDVTFSPHRKARTTSAI 58

Query: 196 TRAGWLLGMGE-KKSALPETVKAGDPVLHEPAQEVRPEEIGSERIQKIIDDMVKVMRKAP 372
           ++AGWLLG+G+ KK+ LPE V+AGDPVLHEPA+EV P EIGSERIQ IIDDMVKVMR AP
Sbjct: 59  SKAGWLLGLGQNKKAKLPEIVQAGDPVLHEPAREVDPGEIGSERIQNIIDDMVKVMRSAP 118

Query: 373 GVGLAAPQIGIPLRIIVLEDTKEYISYAPKQETKAQDRRPFDLLVVINPKLKRKGDKTAF 552
           GVGLAAPQIG+PLRIIVLEDTKEYISY  K+E KA DRRPFDLL+++NPKLK+K D+TA 
Sbjct: 119 GVGLAAPQIGVPLRIIVLEDTKEYISYQSKEEIKAFDRRPFDLLMILNPKLKKKSDRTAL 178

Query: 553 FFEGCLSVDGFRAVVERHLEVEVTGFDREGQAIKVDASGWQARIFQHECDHLDGTLYVDK 732
           FFEGCLSV+G+RAVVER+L++EVTG DR+GQ IKVDA+GWQARI QHECDHLDGTLYVDK
Sbjct: 179 FFEGCLSVNGYRAVVERYLDIEVTGLDRDGQPIKVDATGWQARILQHECDHLDGTLYVDK 238

Query: 733 MVPRTFRTVNNLDLPLAIGCPKLGV 807
           MVP+TFRTV NLDLPLA GCPKLGV
Sbjct: 239 MVPKTFRTVENLDLPLAEGCPKLGV 263


>ref|XP_006416911.1| hypothetical protein EUTSA_v10008467mg [Eutrema salsugineum]
           gi|557094682|gb|ESQ35264.1| hypothetical protein
           EUTSA_v10008467mg [Eutrema salsugineum]
          Length = 270

 Score =  348 bits (892), Expect = 2e-93
 Identities = 179/263 (68%), Positives = 207/263 (78%), Gaps = 2/263 (0%)
 Frame = +1

Query: 22  MESIQRITHRFFPITLTQKCFKTIPRTPLLTRPVSWPKQPVLRPVTINSRRNHSSGLATR 201
           ME++ R + R  P++    C         +  PVS P   +L    + S  + SS L T+
Sbjct: 13  METLFRFSFRLLPVSAAVTCRS-------IRFPVSRPDSSLLLNRKLYSSSSSSSSLTTK 65

Query: 202 AGWLLGMGEKKSA--LPETVKAGDPVLHEPAQEVRPEEIGSERIQKIIDDMVKVMRKAPG 375
           AGWLLG+G+KK    LP+ V AGDPVLHE A+EV PEEI SERIQKIIDDMVKVMR APG
Sbjct: 66  AGWLLGLGDKKKKVDLPDIVAAGDPVLHEKAREVDPEEIKSERIQKIIDDMVKVMRLAPG 125

Query: 376 VGLAAPQIGIPLRIIVLEDTKEYISYAPKQETKAQDRRPFDLLVVINPKLKRKGDKTAFF 555
           VGLAAPQIGIPLRIIVLEDTKEYISYAPK+E  AQ+RRPFDL+V++NP+LK   +K A F
Sbjct: 126 VGLAAPQIGIPLRIIVLEDTKEYISYAPKEEILAQERRPFDLMVLVNPELKGSSNKKALF 185

Query: 556 FEGCLSVDGFRAVVERHLEVEVTGFDREGQAIKVDASGWQARIFQHECDHLDGTLYVDKM 735
           FEGCLSVDGFRAVVER+LEV VTG+DR+G+ I+V+ASGWQARI QHECDHLDG LYVDKM
Sbjct: 186 FEGCLSVDGFRAVVERYLEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDGNLYVDKM 245

Query: 736 VPRTFRTVNNLDLPLAIGCPKLG 804
           VPRTFRTV+NLDLPLA GCPKLG
Sbjct: 246 VPRTFRTVDNLDLPLAEGCPKLG 268


>ref|XP_006305911.1| hypothetical protein CARUB_v10011124mg [Capsella rubella]
           gi|482574622|gb|EOA38809.1| hypothetical protein
           CARUB_v10011124mg [Capsella rubella]
          Length = 270

 Score =  347 bits (890), Expect = 4e-93
 Identities = 183/268 (68%), Positives = 209/268 (77%), Gaps = 2/268 (0%)
 Frame = +1

Query: 7   ELCSQMESIQRITHRFFPITLTQKCFKTIPRTPLLTRPVSWPKQPVLRPVTINSRRNHSS 186
           E    ME++ R++ R  P++    C +   R P+ TRP S     +L     N   + SS
Sbjct: 7   EQAPAMETLFRVSLRLLPVSAAVTCRRI--RFPV-TRPNS---SYLLNRKLNNLPSSSSS 60

Query: 187 GLATRAGWLLGMGEKKSA--LPETVKAGDPVLHEPAQEVRPEEIGSERIQKIIDDMVKVM 360
            L+T+AGWLLG+GEKK    LPE V AGDPVLHE A+EV PEEIGSERIQKIIDDM+KVM
Sbjct: 61  SLSTKAGWLLGLGEKKKKVELPEIVGAGDPVLHEKAREVDPEEIGSERIQKIIDDMIKVM 120

Query: 361 RKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKQETKAQDRRPFDLLVVINPKLKRKGD 540
           R APGVGLAAPQIG+PLRIIVLEDTKEYISYAPK E  AQDRRPFDL V++NP LK   +
Sbjct: 121 RLAPGVGLAAPQIGVPLRIIVLEDTKEYISYAPKDEILAQDRRPFDLTVMVNPVLKESSN 180

Query: 541 KTAFFFEGCLSVDGFRAVVERHLEVEVTGFDREGQAIKVDASGWQARIFQHECDHLDGTL 720
           K A FFEGCLSVDGFRA VER+LEV VTG+DR+G+ I+V+ASGWQARI QHECDHLDG L
Sbjct: 181 KKALFFEGCLSVDGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDGNL 240

Query: 721 YVDKMVPRTFRTVNNLDLPLAIGCPKLG 804
           YVDKMVPRTFRTV+NLDLPLA GCPKLG
Sbjct: 241 YVDKMVPRTFRTVDNLDLPLAEGCPKLG 268


>ref|XP_003531707.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform X1
           [Glycine max] gi|571472535|ref|XP_006585636.1|
           PREDICTED: peptide deformylase 1A, chloroplastic-like
           isoform X2 [Glycine max]
           gi|571472537|ref|XP_006585637.1| PREDICTED: peptide
           deformylase 1A, chloroplastic-like isoform X3 [Glycine
           max] gi|571472539|ref|XP_006585638.1| PREDICTED: peptide
           deformylase 1A, chloroplastic-like isoform X4 [Glycine
           max]
          Length = 252

 Score =  345 bits (886), Expect = 1e-92
 Identities = 177/257 (68%), Positives = 201/257 (78%), Gaps = 2/257 (0%)
 Frame = +1

Query: 46  HRFFPITLTQKCFKTIPRTPLLTRPVSWPKQPVLRPVTINSRRNHSSGLATRAGWLLGMG 225
           HR   + ++QK       T +  R    P   + RP      R  S   + RAGW LG+G
Sbjct: 7   HRVLLMPVSQK-------TSIFLRASGTPLSTLARPPL----RWSSQTCSARAGWFLGLG 55

Query: 226 --EKKSALPETVKAGDPVLHEPAQEVRPEEIGSERIQKIIDDMVKVMRKAPGVGLAAPQI 399
              KK+ LP+TVKAGDPVLHEPAQ+V P EI SER+QKIIDDM++VMRKAPGVGLAAPQI
Sbjct: 56  ADSKKTNLPDTVKAGDPVLHEPAQDVDPNEIKSERVQKIIDDMIQVMRKAPGVGLAAPQI 115

Query: 400 GIPLRIIVLEDTKEYISYAPKQETKAQDRRPFDLLVVINPKLKRKGDKTAFFFEGCLSVD 579
           GIPLRIIVLEDTKEYISY  K+E K QDRRPFDLLV++NPKL++KG +TA FFEGCLSVD
Sbjct: 116 GIPLRIIVLEDTKEYISYVSKEEAKTQDRRPFDLLVILNPKLEKKGKRTALFFEGCLSVD 175

Query: 580 GFRAVVERHLEVEVTGFDREGQAIKVDASGWQARIFQHECDHLDGTLYVDKMVPRTFRTV 759
           GFRAVVERHL+VEVTG DR G  IK+ ASGWQARI QHECDHLDGTLYVDKM+PRTFRTV
Sbjct: 176 GFRAVVERHLDVEVTGLDRYGAPIKIIASGWQARILQHECDHLDGTLYVDKMLPRTFRTV 235

Query: 760 NNLDLPLAIGCPKLGVR 810
           +N+DLPLA GCPKLG R
Sbjct: 236 DNMDLPLAQGCPKLGPR 252


>ref|XP_006465354.1| PREDICTED: peptide deformylase 1A, chloroplastic-like [Citrus
           sinensis]
          Length = 266

 Score =  345 bits (884), Expect = 2e-92
 Identities = 180/265 (67%), Positives = 209/265 (78%), Gaps = 3/265 (1%)
 Frame = +1

Query: 22  MESIQRITHRFFPITLTQKCFKTIPRTPLLTRP-VSWPKQPVLRPVTINSRRN-HSSGLA 195
           ME+I R      PI L ++  K+ P     TR  VS P       VT +  R   ++   
Sbjct: 1   MEAIHRFCVCHLPICLGKRHIKSAPIILCPTRKLVSSPD--FSNDVTFSPHRKARTTSTI 58

Query: 196 TRAGWLLGMGE-KKSALPETVKAGDPVLHEPAQEVRPEEIGSERIQKIIDDMVKVMRKAP 372
           ++AGWLLG+G+ KK+ LPE V+AGDPVLHEPA+EV P EIGSERIQ IIDDMVKVMR AP
Sbjct: 59  SKAGWLLGLGQNKKAMLPEIVQAGDPVLHEPAREVDPGEIGSERIQNIIDDMVKVMRSAP 118

Query: 373 GVGLAAPQIGIPLRIIVLEDTKEYISYAPKQETKAQDRRPFDLLVVINPKLKRKGDKTAF 552
           GVGLAAPQIG+PLRIIVLEDTKEYISY  K+E KA DRRPFDLL+++NPKLK+K D+TA 
Sbjct: 119 GVGLAAPQIGVPLRIIVLEDTKEYISYQSKEEIKAFDRRPFDLLMILNPKLKKKSDRTAL 178

Query: 553 FFEGCLSVDGFRAVVERHLEVEVTGFDREGQAIKVDASGWQARIFQHECDHLDGTLYVDK 732
           FFEGCLSV+G+RAVVER+L++EVTG D +GQ IKVDA+GWQARI QHECDHLDGTLYVDK
Sbjct: 179 FFEGCLSVNGYRAVVERYLDIEVTGLDHDGQPIKVDATGWQARILQHECDHLDGTLYVDK 238

Query: 733 MVPRTFRTVNNLDLPLAIGCPKLGV 807
           MVP+TFR V NLDLPLA GCPKLGV
Sbjct: 239 MVPKTFRIVENLDLPLAEGCPKLGV 263


>ref|XP_004506907.1| PREDICTED: peptide deformylase 1A, chloroplastic-like [Cicer
           arietinum]
          Length = 252

 Score =  343 bits (880), Expect = 5e-92
 Identities = 172/244 (70%), Positives = 199/244 (81%), Gaps = 3/244 (1%)
 Frame = +1

Query: 88  TIPRTPLLTRPVSWPKQPVLRPVTINSRRNHSSGLATRAGWLLGM---GEKKSALPETVK 258
           +I +  L T   + P    L  +T++S  + +S + TRAGW LG+    +KK  LP+TVK
Sbjct: 13  SITKNSLFTHKTTTP----LSLLTLSSSSSQNSTVRTRAGWFLGLTSDNKKKMNLPDTVK 68

Query: 259 AGDPVLHEPAQEVRPEEIGSERIQKIIDDMVKVMRKAPGVGLAAPQIGIPLRIIVLEDTK 438
           AGDPVLHEPAQEV   EI SE+IQKIIDDM++VMRKAPGVGLAAPQIGIP RIIVLEDTK
Sbjct: 69  AGDPVLHEPAQEVDISEINSEKIQKIIDDMIRVMRKAPGVGLAAPQIGIPYRIIVLEDTK 128

Query: 439 EYISYAPKQETKAQDRRPFDLLVVINPKLKRKGDKTAFFFEGCLSVDGFRAVVERHLEVE 618
           EYISYAPK+E KAQDRRPFDLLV++NPKLK K +KTA FFEGCLSVDG+RA+VER+L+VE
Sbjct: 129 EYISYAPKEEIKAQDRRPFDLLVILNPKLKNKSNKTALFFEGCLSVDGYRAMVERYLDVE 188

Query: 619 VTGFDREGQAIKVDASGWQARIFQHECDHLDGTLYVDKMVPRTFRTVNNLDLPLAIGCPK 798
           VTG DR G+ IK+ ASGWQAR+ QHECDHLDGTLYVDKMVPRTFR + NLDLPLA G PK
Sbjct: 189 VTGLDRNGEPIKITASGWQARVLQHECDHLDGTLYVDKMVPRTFRIIENLDLPLAQGSPK 248

Query: 799 LGVR 810
           LG R
Sbjct: 249 LGPR 252


>gb|AAD39667.1|AC007591_32 Simalar to gi|4377403 Polypeptide Deformylase from Chlamydia
           pneumoniae genome gb|AE001687 [Arabidopsis thaliana]
           gi|13605760|gb|AAK32873.1|AF361861_1 At1g15390/F9L1_34
           [Arabidopsis thaliana] gi|22136570|gb|AAM91071.1|
           At1g15390/F9L1_34 [Arabidopsis thaliana]
          Length = 259

 Score =  340 bits (873), Expect = 3e-91
 Identities = 176/264 (66%), Positives = 206/264 (78%), Gaps = 3/264 (1%)
 Frame = +1

Query: 22  MESIQRITHRFFPITLTQKCFKTIPRTPLLTRPVSWP-KQPVLRPVTINSRRNHSSGLAT 198
           ME++ R++ R  P++    C         +  PVS P    +L     N   + SS L+T
Sbjct: 1   METLFRVSLRLLPVSAAVTCRS-------IRFPVSRPGSSHLLNRKLYNLPTSSSSSLST 53

Query: 199 RAGWLLGMGEKKSA--LPETVKAGDPVLHEPAQEVRPEEIGSERIQKIIDDMVKVMRKAP 372
           +AGWLLG+GEKK    LPE V +GDPVLHE A+EV P EIGSERIQKIIDDM+KVMR AP
Sbjct: 54  KAGWLLGLGEKKKKVDLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRLAP 113

Query: 373 GVGLAAPQIGIPLRIIVLEDTKEYISYAPKQETKAQDRRPFDLLVVINPKLKRKGDKTAF 552
           GVGLAAPQIG+PLRIIVLEDTKEYISYAPK+E  AQ+RR FDL+V++NP LK + +K A 
Sbjct: 114 GVGLAAPQIGVPLRIIVLEDTKEYISYAPKEEILAQERRHFDLMVMVNPVLKERSNKKAL 173

Query: 553 FFEGCLSVDGFRAVVERHLEVEVTGFDREGQAIKVDASGWQARIFQHECDHLDGTLYVDK 732
           FFEGCLSVDGFRA VER+LEV VTG+DR+G+ I+V+ASGWQARI QHECDHLDG LYVDK
Sbjct: 174 FFEGCLSVDGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDGNLYVDK 233

Query: 733 MVPRTFRTVNNLDLPLAIGCPKLG 804
           MVPRTFRTV+NLDLPLA GCPKLG
Sbjct: 234 MVPRTFRTVDNLDLPLAEGCPKLG 257


>ref|NP_563974.1| peptide deformylase 1A [Arabidopsis thaliana]
           gi|334302914|sp|Q9FV53.3|DEF1A_ARATH RecName:
           Full=Peptide deformylase 1A,
           chloroplastic/mitochondrial; Short=AtDEF1;
           Short=AtPDF1A; Short=PDF 1A; AltName: Full=Polypeptide
           deformylase; Flags: Precursor
           gi|11320952|gb|AAG33973.1|AF250959_1 peptide
           deformylase-like protein [Arabidopsis thaliana]
           gi|332191194|gb|AEE29315.1| peptide deformylase 1A
           [Arabidopsis thaliana]
          Length = 269

 Score =  340 bits (873), Expect = 3e-91
 Identities = 176/264 (66%), Positives = 206/264 (78%), Gaps = 3/264 (1%)
 Frame = +1

Query: 22  MESIQRITHRFFPITLTQKCFKTIPRTPLLTRPVSWP-KQPVLRPVTINSRRNHSSGLAT 198
           ME++ R++ R  P++    C         +  PVS P    +L     N   + SS L+T
Sbjct: 11  METLFRVSLRLLPVSAAVTCRS-------IRFPVSRPGSSHLLNRKLYNLPTSSSSSLST 63

Query: 199 RAGWLLGMGEKKSA--LPETVKAGDPVLHEPAQEVRPEEIGSERIQKIIDDMVKVMRKAP 372
           +AGWLLG+GEKK    LPE V +GDPVLHE A+EV P EIGSERIQKIIDDM+KVMR AP
Sbjct: 64  KAGWLLGLGEKKKKVDLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRLAP 123

Query: 373 GVGLAAPQIGIPLRIIVLEDTKEYISYAPKQETKAQDRRPFDLLVVINPKLKRKGDKTAF 552
           GVGLAAPQIG+PLRIIVLEDTKEYISYAPK+E  AQ+RR FDL+V++NP LK + +K A 
Sbjct: 124 GVGLAAPQIGVPLRIIVLEDTKEYISYAPKEEILAQERRHFDLMVMVNPVLKERSNKKAL 183

Query: 553 FFEGCLSVDGFRAVVERHLEVEVTGFDREGQAIKVDASGWQARIFQHECDHLDGTLYVDK 732
           FFEGCLSVDGFRA VER+LEV VTG+DR+G+ I+V+ASGWQARI QHECDHLDG LYVDK
Sbjct: 184 FFEGCLSVDGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDGNLYVDK 243

Query: 733 MVPRTFRTVNNLDLPLAIGCPKLG 804
           MVPRTFRTV+NLDLPLA GCPKLG
Sbjct: 244 MVPRTFRTVDNLDLPLAEGCPKLG 267


Top