BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00015237
         (305 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347459.1| PREDICTED: general transcription factor IIH ...   152   6e-35
ref|XP_004241513.1| PREDICTED: general transcription factor IIH ...   152   6e-35
gb|EPS73731.1| hypothetical protein M569_01027, partial [Genlise...   129   4e-28
ref|XP_004290858.1| PREDICTED: general transcription factor IIH ...   117   1e-24
ref|XP_004290857.1| PREDICTED: general transcription factor IIH ...   117   1e-24
ref|XP_002284465.1| PREDICTED: general transcription factor IIH ...   117   2e-24
ref|XP_002307429.2| basal transcription factor complex subunit-r...   115   5e-24
gb|EMJ24450.1| hypothetical protein PRUPE_ppa009386mg [Prunus pe...   112   4e-23
ref|XP_002532948.1| RNA polymerase II transcription factor B sub...   110   2e-22
ref|NP_564050.1| basal transcription factor complex subunit-rela...   110   2e-22
ref|XP_004152842.1| PREDICTED: general transcription factor IIH ...   110   3e-22
ref|XP_006472762.1| PREDICTED: general transcription factor IIH ...   109   3e-22
ref|XP_002892997.1| hypothetical protein ARALYDRAFT_472054 [Arab...   109   3e-22
ref|XP_006305456.1| hypothetical protein CARUB_v10009867mg [Caps...   108   6e-22
gb|EOY16262.1| Basal transcription factor complex subunit-relate...   108   7e-22
gb|EOY16261.1| Basal transcription factor complex subunit-relate...   108   7e-22
ref|XP_006828057.1| hypothetical protein AMTR_s00008p00264310, p...   107   2e-21
ref|XP_006416613.1| hypothetical protein EUTSA_v10008316mg [Eutr...   107   2e-21
gb|ADE77788.1| unknown [Picea sitchensis]                             103   3e-20
ref|XP_004170865.1| PREDICTED: general transcription factor IIH ...   102   5e-20

>ref|XP_006347459.1| PREDICTED: general transcription factor IIH subunit 3-like [Solanum
           tuberosum]
          Length = 290

 Score =  152 bits (383), Expect = 6e-35
 Identities = 78/101 (77%), Positives = 81/101 (80%)
 Frame = +3

Query: 3   DSSASQSQNLRAEHLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFRS 182
           DSS S  Q  RAE LL+KLE+FVDKDESL  EDSVDG GF           CYIQRVFRS
Sbjct: 75  DSSTSSMQ--RAECLLEKLEDFVDKDESLSQEDSVDGVGFSLLSGSLSMALCYIQRVFRS 132

Query: 183 GPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQRSMVPIDS 305
           GPLHPQPRILCLHGSPDGPGQYVA+MNSIFSAQRSMVPIDS
Sbjct: 133 GPLHPQPRILCLHGSPDGPGQYVAVMNSIFSAQRSMVPIDS 173


>ref|XP_004241513.1| PREDICTED: general transcription factor IIH subunit 3-like [Solanum
           lycopersicum]
          Length = 290

 Score =  152 bits (383), Expect = 6e-35
 Identities = 78/101 (77%), Positives = 81/101 (80%)
 Frame = +3

Query: 3   DSSASQSQNLRAEHLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFRS 182
           DSS S  Q  RAE LL+KLE+FVDKDESL  EDSVDG GF           CYIQRVFRS
Sbjct: 75  DSSTSSMQ--RAECLLEKLEDFVDKDESLSQEDSVDGVGFSLLSGALSMALCYIQRVFRS 132

Query: 183 GPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQRSMVPIDS 305
           GPLHPQPRILCLHGSPDGPGQYVA+MNSIFSAQRSMVPIDS
Sbjct: 133 GPLHPQPRILCLHGSPDGPGQYVAVMNSIFSAQRSMVPIDS 173


>gb|EPS73731.1| hypothetical protein M569_01027, partial [Genlisea aurea]
          Length = 208

 Score =  129 bits (324), Expect = 4e-28
 Identities = 66/102 (64%), Positives = 75/102 (73%), Gaps = 1/102 (0%)
 Frame = +3

Query: 3   DSSASQSQNLRA-EHLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFR 179
           DS+ SQ+Q+    E LLQ+LEEFV+KDES+    SV G  F           CYIQR+FR
Sbjct: 74  DSTTSQNQSQHCGETLLQRLEEFVEKDESMCRVSSVHGSCFSLLSGSLSMALCYIQRIFR 133

Query: 180 SGPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQRSMVPIDS 305
           +G  HPQPRILCLHGSPDGPGQY+AIMNSIFSAQR MVPIDS
Sbjct: 134 TGNRHPQPRILCLHGSPDGPGQYIAIMNSIFSAQRLMVPIDS 175


>ref|XP_004290858.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
           2 [Fragaria vesca subsp. vesca]
          Length = 298

 Score =  117 bits (294), Expect = 1e-24
 Identities = 60/88 (68%), Positives = 64/88 (72%)
 Frame = +3

Query: 42  HLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLH 221
           HLL+KLEEFV KDE LL E S +G              CYIQ+VFRSGP HP PRILCL 
Sbjct: 92  HLLKKLEEFVAKDEQLLKEGSAEGIPSSLLSGSLSMALCYIQKVFRSGPQHPHPRILCLQ 151

Query: 222 GSPDGPGQYVAIMNSIFSAQRSMVPIDS 305
           GS DGP QYVAIMN+IFSAQRSMVPIDS
Sbjct: 152 GSSDGPEQYVAIMNAIFSAQRSMVPIDS 179


>ref|XP_004290857.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
           1 [Fragaria vesca subsp. vesca]
          Length = 300

 Score =  117 bits (294), Expect = 1e-24
 Identities = 60/88 (68%), Positives = 64/88 (72%)
 Frame = +3

Query: 42  HLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLH 221
           HLL+KLEEFV KDE LL E S +G              CYIQ+VFRSGP HP PRILCL 
Sbjct: 92  HLLKKLEEFVAKDEQLLKEGSAEGIPSSLLSGSLSMALCYIQKVFRSGPQHPHPRILCLQ 151

Query: 222 GSPDGPGQYVAIMNSIFSAQRSMVPIDS 305
           GS DGP QYVAIMN+IFSAQRSMVPIDS
Sbjct: 152 GSSDGPEQYVAIMNAIFSAQRSMVPIDS 179


>ref|XP_002284465.1| PREDICTED: general transcription factor IIH subunit 3 [Vitis
           vinifera] gi|302141830|emb|CBI19033.3| unnamed protein
           product [Vitis vinifera]
          Length = 297

 Score =  117 bits (293), Expect = 2e-24
 Identities = 60/88 (68%), Positives = 64/88 (72%)
 Frame = +3

Query: 42  HLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLH 221
           +LLQKLEEFV  DE L  E    G G            CYIQRVFR+GPLHPQPRILCL 
Sbjct: 93  NLLQKLEEFVTGDEKLSKEVLAAGIGSSLLSGSLSMALCYIQRVFRTGPLHPQPRILCLQ 152

Query: 222 GSPDGPGQYVAIMNSIFSAQRSMVPIDS 305
           GSPDGP QYVA+MN+IFSAQRSMVPIDS
Sbjct: 153 GSPDGPEQYVAVMNAIFSAQRSMVPIDS 180


>ref|XP_002307429.2| basal transcription factor complex subunit-related family protein
           [Populus trichocarpa] gi|550339079|gb|EEE94425.2| basal
           transcription factor complex subunit-related family
           protein [Populus trichocarpa]
          Length = 298

 Score =  115 bits (289), Expect = 5e-24
 Identities = 60/88 (68%), Positives = 64/88 (72%)
 Frame = +3

Query: 42  HLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLH 221
           +LLQKLEEF+ KDE L  E S                 CYIQRVFRSGPLHPQPRILCL 
Sbjct: 94  NLLQKLEEFMIKDEKLGKEQSQRAIKSSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLQ 153

Query: 222 GSPDGPGQYVAIMNSIFSAQRSMVPIDS 305
           GSPDGP QYVA+MN+IFSAQRSMVPIDS
Sbjct: 154 GSPDGPEQYVAVMNAIFSAQRSMVPIDS 181


>gb|EMJ24450.1| hypothetical protein PRUPE_ppa009386mg [Prunus persica]
          Length = 295

 Score =  112 bits (281), Expect = 4e-23
 Identities = 65/108 (60%), Positives = 71/108 (65%), Gaps = 7/108 (6%)
 Frame = +3

Query: 3   DSSASQSQN-------LRAEHLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCY 161
           DSS S +Q         R  +LLQKLEEFV +DE L+ E   +G              CY
Sbjct: 72  DSSTSTNQGSDNGRMPARCVNLLQKLEEFVIEDEQLIKEGLREGIASSLLSGSLSMALCY 131

Query: 162 IQRVFRSGPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQRSMVPIDS 305
           IQRVFRSGPLHPQPRILCL GS DGP QYVAIMN+IFSAQRS VPIDS
Sbjct: 132 IQRVFRSGPLHPQPRILCLQGSSDGPEQYVAIMNAIFSAQRS-VPIDS 178


>ref|XP_002532948.1| RNA polymerase II transcription factor B subunit, putative [Ricinus
           communis] gi|223527277|gb|EEF29432.1| RNA polymerase II
           transcription factor B subunit, putative [Ricinus
           communis]
          Length = 266

 Score =  110 bits (275), Expect = 2e-22
 Identities = 58/88 (65%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
 Frame = +3

Query: 45  LLQKLEEFVDKDESL-LHEDSVDGPGFXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLH 221
           LLQKLE+F+ +DE L   E+S                 CYIQR+FRSGPLHPQPRILCL 
Sbjct: 93  LLQKLEDFMIRDEKLGKGEESKRKIASSLLSGSLSMALCYIQRIFRSGPLHPQPRILCLQ 152

Query: 222 GSPDGPGQYVAIMNSIFSAQRSMVPIDS 305
           GSPDGP QYVA+MNSIFSAQRSMVPIDS
Sbjct: 153 GSPDGPEQYVAVMNSIFSAQRSMVPIDS 180


>ref|NP_564050.1| basal transcription factor complex subunit-related protein
           [Arabidopsis thaliana] gi|21537277|gb|AAM61618.1|
           unknown [Arabidopsis thaliana]
           gi|92856638|gb|ABE77412.1| At1g18340 [Arabidopsis
           thaliana] gi|332191584|gb|AEE29705.1| basal
           transcription factor complex subunit-related protein
           [Arabidopsis thaliana]
          Length = 301

 Score =  110 bits (275), Expect = 2e-22
 Identities = 60/88 (68%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
 Frame = +3

Query: 45  LLQKLEEFVDKDESLLHED-SVDGPGFXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLH 221
           LL+KLEEFV KDE L  E+ S D               CYIQRVFRSG LHPQPRILCL 
Sbjct: 96  LLKKLEEFVTKDEELSKEEVSEDRIPSCLLSGSLSMALCYIQRVFRSGHLHPQPRILCLQ 155

Query: 222 GSPDGPGQYVAIMNSIFSAQRSMVPIDS 305
           GSPDGP QYVA+MNSIFSAQR MVPIDS
Sbjct: 156 GSPDGPEQYVAVMNSIFSAQRLMVPIDS 183


>ref|XP_004152842.1| PREDICTED: general transcription factor IIH subunit 3-like [Cucumis
           sativus]
          Length = 295

 Score =  110 bits (274), Expect = 3e-22
 Identities = 57/87 (65%), Positives = 61/87 (70%)
 Frame = +3

Query: 45  LLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLHG 224
           LL+ LEEFV  DE  + ED   G              CYIQ+VFRSG LHPQPRILCL G
Sbjct: 93  LLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQPRILCLQG 152

Query: 225 SPDGPGQYVAIMNSIFSAQRSMVPIDS 305
           SPDGP QYVAIMN+IFSAQRSMVPIDS
Sbjct: 153 SPDGPEQYVAIMNAIFSAQRSMVPIDS 179


>ref|XP_006472762.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
           X1 [Citrus sinensis]
          Length = 298

 Score =  109 bits (273), Expect = 3e-22
 Identities = 57/87 (65%), Positives = 62/87 (71%)
 Frame = +3

Query: 45  LLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLHG 224
           LLQ LEEF++KDE L  ++                  CYIQRVFRSG LHPQPRILCL G
Sbjct: 93  LLQNLEEFMNKDEQLGKQEPEGRIACSLLSGSLSMALCYIQRVFRSGLLHPQPRILCLQG 152

Query: 225 SPDGPGQYVAIMNSIFSAQRSMVPIDS 305
           SPDGP QYVAIMN+IFSAQRSMVPIDS
Sbjct: 153 SPDGPEQYVAIMNAIFSAQRSMVPIDS 179


>ref|XP_002892997.1| hypothetical protein ARALYDRAFT_472054 [Arabidopsis lyrata subsp.
           lyrata] gi|297338839|gb|EFH69256.1| hypothetical protein
           ARALYDRAFT_472054 [Arabidopsis lyrata subsp. lyrata]
          Length = 301

 Score =  109 bits (273), Expect = 3e-22
 Identities = 59/88 (67%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
 Frame = +3

Query: 45  LLQKLEEFVDKDESLLHED-SVDGPGFXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLH 221
           LL+KLE+FV KDE L  E+ S D               CYIQRVFRSG LHPQPRILCL 
Sbjct: 96  LLKKLEDFVTKDEELSREEVSEDRIPSCLLSGSLSMALCYIQRVFRSGHLHPQPRILCLQ 155

Query: 222 GSPDGPGQYVAIMNSIFSAQRSMVPIDS 305
           GSPDGP QYVA+MNSIFSAQR MVPIDS
Sbjct: 156 GSPDGPEQYVAVMNSIFSAQRLMVPIDS 183


>ref|XP_006305456.1| hypothetical protein CARUB_v10009867mg [Capsella rubella]
           gi|482574167|gb|EOA38354.1| hypothetical protein
           CARUB_v10009867mg [Capsella rubella]
          Length = 301

 Score =  108 bits (271), Expect = 6e-22
 Identities = 58/88 (65%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
 Frame = +3

Query: 45  LLQKLEEFVDKDESLLHED-SVDGPGFXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLH 221
           LL KLE+FV KDE L  E+ + D               CYIQRVFRSG LHPQPRILCL 
Sbjct: 96  LLNKLEDFVTKDEELSREEGNEDRTPSCLLSGSLSMALCYIQRVFRSGHLHPQPRILCLQ 155

Query: 222 GSPDGPGQYVAIMNSIFSAQRSMVPIDS 305
           GSPDGP QYVA+MNSIFSAQR MVPIDS
Sbjct: 156 GSPDGPEQYVAVMNSIFSAQRLMVPIDS 183


>gb|EOY16262.1| Basal transcription factor complex subunit-related isoform 2
           [Theobroma cacao]
          Length = 274

 Score =  108 bits (270), Expect = 7e-22
 Identities = 62/108 (57%), Positives = 67/108 (62%), Gaps = 7/108 (6%)
 Frame = +3

Query: 3   DSSASQSQNLR-------AEHLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCY 161
           DSS+  +Q+            LLQKLEEF+ KDE L  E                   CY
Sbjct: 72  DSSSDLNQSFENGRMPVMCSSLLQKLEEFLIKDEQLSKEVPEGRIKSSLLSGSLSMALCY 131

Query: 162 IQRVFRSGPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQRSMVPIDS 305
           IQRVFRSG LHP PRILCL GSPDGP QYVAIMN+IFSAQRSMVPIDS
Sbjct: 132 IQRVFRSGALHPHPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDS 179


>gb|EOY16261.1| Basal transcription factor complex subunit-related isoform 1
           [Theobroma cacao]
          Length = 296

 Score =  108 bits (270), Expect = 7e-22
 Identities = 62/108 (57%), Positives = 67/108 (62%), Gaps = 7/108 (6%)
 Frame = +3

Query: 3   DSSASQSQNLR-------AEHLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCY 161
           DSS+  +Q+            LLQKLEEF+ KDE L  E                   CY
Sbjct: 72  DSSSDLNQSFENGRMPVMCSSLLQKLEEFLIKDEQLSKEVPEGRIKSSLLSGSLSMALCY 131

Query: 162 IQRVFRSGPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQRSMVPIDS 305
           IQRVFRSG LHP PRILCL GSPDGP QYVAIMN+IFSAQRSMVPIDS
Sbjct: 132 IQRVFRSGALHPHPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDS 179


>ref|XP_006828057.1| hypothetical protein AMTR_s00008p00264310, partial [Amborella
           trichopoda] gi|548832692|gb|ERM95473.1| hypothetical
           protein AMTR_s00008p00264310, partial [Amborella
           trichopoda]
          Length = 277

 Score =  107 bits (267), Expect = 2e-21
 Identities = 52/87 (59%), Positives = 61/87 (70%)
 Frame = +3

Query: 45  LLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLHG 224
           +LQKLE+F+ KD+ L + D   G              CYIQR+ R+GP+HPQPRILCL  
Sbjct: 97  ILQKLEDFIAKDQQLSNSDEAPGKICSLLSGSLSLALCYIQRILRTGPVHPQPRILCLQA 156

Query: 225 SPDGPGQYVAIMNSIFSAQRSMVPIDS 305
           SPDG  QYVAIMN+IFSAQRSMVPIDS
Sbjct: 157 SPDGSEQYVAIMNAIFSAQRSMVPIDS 183


>ref|XP_006416613.1| hypothetical protein EUTSA_v10008316mg [Eutrema salsugineum]
           gi|557094384|gb|ESQ34966.1| hypothetical protein
           EUTSA_v10008316mg [Eutrema salsugineum]
          Length = 300

 Score =  107 bits (266), Expect = 2e-21
 Identities = 57/88 (64%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
 Frame = +3

Query: 45  LLQKLEEFVDKDESLLHEDS-VDGPGFXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLH 221
           LL+KLE+F  KDE L  E+   D               CYIQRVFRSG LHPQPRILCL 
Sbjct: 95  LLEKLEDFAAKDEELSKEEEHEDRIASSLLSGSLSMALCYIQRVFRSGHLHPQPRILCLQ 154

Query: 222 GSPDGPGQYVAIMNSIFSAQRSMVPIDS 305
           GSPDGP QYVA+MNSIFSAQR MVPIDS
Sbjct: 155 GSPDGPEQYVAVMNSIFSAQRLMVPIDS 182


>gb|ADE77788.1| unknown [Picea sitchensis]
          Length = 306

 Score =  103 bits (256), Expect = 3e-20
 Identities = 52/101 (51%), Positives = 66/101 (65%)
 Frame = +3

Query: 3   DSSASQSQNLRAEHLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFRS 182
           D+  SQ     +  ++Q+LE+FV +D++L   ++                 CYIQR+ R 
Sbjct: 97  DTKCSQEFLTPSTIIVQQLEDFVRRDQALNTNNNATKNIHSLLSGSLSMALCYIQRIIRG 156

Query: 183 GPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQRSMVPIDS 305
           GP HPQPRILCL GSPDGP QYVAIMN+IFSAQRSMVP+DS
Sbjct: 157 GPSHPQPRILCLQGSPDGPQQYVAIMNAIFSAQRSMVPVDS 197


>ref|XP_004170865.1| PREDICTED: general transcription factor IIH subunit 3-like [Cucumis
           sativus]
          Length = 187

 Score =  102 bits (254), Expect = 5e-20
 Identities = 54/85 (63%), Positives = 58/85 (68%)
 Frame = +3

Query: 45  LLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLHG 224
           LL+ LEEFV  DE  + ED   G              CYIQ+VFRSG LHPQPRILCL G
Sbjct: 93  LLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQPRILCLQG 152

Query: 225 SPDGPGQYVAIMNSIFSAQRSMVPI 299
           SPDGP QYVAIMN+IFSAQRSMV I
Sbjct: 153 SPDGPEQYVAIMNAIFSAQRSMVCI 177