BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00015095
         (410 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   199   4e-49
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   193   2e-47
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi...   191   9e-47
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]         190   1e-46
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   188   6e-46
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]   188   6e-46
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   188   6e-46
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   187   2e-45
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   187   2e-45
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...   186   2e-45
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   186   2e-45
gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal...   184   8e-45
gb|AAD36943.1|AF069441_3 putative polyprotein [Arabidopsis thali...   184   8e-45
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           184   1e-44
emb|CAA31653.1| polyprotein [Arabidopsis thaliana]                    183   2e-44
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar...   183   2e-44
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc...   181   7e-44
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...   181   7e-44
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...   181   7e-44
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]        181   9e-44

>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  199 bits (505), Expect = 4e-49
 Identities = 90/136 (66%), Positives = 113/136 (83%)
 Frame = +1

Query: 1   HADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRI 180
           H+D+WGPS  P+ GG RYFL++IDD+SRKVW++ +KNKS+ F KFK WKIL+E QT +++
Sbjct: 454 HSDLWGPSRVPSIGGARYFLTLIDDYSRKVWIYFLKNKSETFLKFKEWKILVETQTSRKV 513

Query: 181 KTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSG 360
           K LRTDNGLEF +N F++LC + GI RH+TV YTPQQNG+AERMNRT+LERVR ML+SSG
Sbjct: 514 KKLRTDNGLEFLSNDFNSLCQKEGIARHRTVRYTPQQNGLAERMNRTILERVRCMLSSSG 573

Query: 361 LSKRFWGEAVHTAAYL 408
           LSK FW EA  TA +L
Sbjct: 574 LSKVFWAEAAETAVHL 589


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  193 bits (491), Expect = 2e-47
 Identities = 89/136 (65%), Positives = 109/136 (80%)
 Frame = +1

Query: 1   HADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRI 180
           H+D WGP    + GG R+F+SIIDD+SR  WV++MK+KS+ F+KFK WKIL+ENQTGK+I
Sbjct: 474 HSDCWGPCRVESLGGCRFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQTGKKI 533

Query: 181 KTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSG 360
           K LRTDNGLEFC + FD  C + GI RH+TV  TPQQNGVAERMN+TLLER R ML+++G
Sbjct: 534 KRLRTDNGLEFCWSEFDQFCKDEGIARHRTVRNTPQQNGVAERMNQTLLERARCMLSNAG 593

Query: 361 LSKRFWGEAVHTAAYL 408
           L +RFW EAV TA YL
Sbjct: 594 LDRRFWAEAVSTACYL 609


>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  191 bits (485), Expect = 9e-47
 Identities = 88/137 (64%), Positives = 103/137 (75%), Gaps = 1/137 (0%)
 Frame = +1

Query: 1   HADVWGPSSEPTQGGN-RYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKR 177
           H+D+WG    P   G  +YF+SIIDDF+RKVWV+ MK K + FEKF  W  L+ENQT +R
Sbjct: 501 HSDLWGAPFVPLSLGKCQYFMSIIDDFTRKVWVYFMKTKDEAFEKFVEWVNLVENQTDRR 560

Query: 178 IKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSMLASS 357
           +KTLRTDNGLEFCN LFD  C   GI RH+T  YTPQQNGVAERMNRT++E+VRSML+ S
Sbjct: 561 VKTLRTDNGLEFCNKLFDGFCESIGIHRHRTCAYTPQQNGVAERMNRTIMEKVRSMLSDS 620

Query: 358 GLSKRFWGEAVHTAAYL 408
           GL KRFW EA HT   L
Sbjct: 621 GLPKRFWAEATHTTVLL 637


>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1363

 Score =  190 bits (483), Expect = 1e-46
 Identities = 85/137 (62%), Positives = 106/137 (77%), Gaps = 1/137 (0%)
 Frame = +1

Query: 1   HADVWGPSSEPTQGGN-RYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKR 177
           H+D+WG  + P   GN +YF+S IDD++RKVWV+ +K K + FEKF +W  L+ENQ+G+R
Sbjct: 508 HSDLWGAPTVPMSLGNCQYFISFIDDYTRKVWVYFLKTKDEAFEKFVSWISLVENQSGER 567

Query: 178 IKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSMLASS 357
           +KTLRTDNGLEFCN +FD  C E G +RH+T  YTPQQNGV ERMNRT++E+VRSML  S
Sbjct: 568 VKTLRTDNGLEFCNRMFDGFCEEKGFQRHRTCAYTPQQNGVVERMNRTIMEKVRSMLCDS 627

Query: 358 GLSKRFWGEAVHTAAYL 408
           GL KRFW EA HTA  L
Sbjct: 628 GLPKRFWAEATHTAVLL 644


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  188 bits (478), Expect = 6e-46
 Identities = 85/136 (62%), Positives = 107/136 (78%)
 Frame = +1

Query: 1    HADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRI 180
            H+D+WGPS   +  G RY+++ IDDFSRKVWV+ +K K +VF KFK WK ++E +TGK +
Sbjct: 595  HSDLWGPSPVESHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVV 654

Query: 181  KTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSG 360
            KTLRTDNGLEFCN  FD  C + GI RH+TV +TPQQNGVAERMN+TL++R R M   +G
Sbjct: 655  KTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAG 714

Query: 361  LSKRFWGEAVHTAAYL 408
            LSK+FW EAV+TAAYL
Sbjct: 715  LSKKFWAEAVNTAAYL 730


>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
          Length = 950

 Score =  188 bits (478), Expect = 6e-46
 Identities = 85/136 (62%), Positives = 107/136 (78%)
 Frame = +1

Query: 1   HADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRI 180
           H+D+WGPS   +  G RY+++ IDDFSRKVWV+ +K K +VF KFK WK ++E +TGK +
Sbjct: 450 HSDLWGPSPVESHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVV 509

Query: 181 KTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSG 360
           KTLRTDNGLEFCN  FD  C + GI RH+TV +TPQQNGVAERMN+TL++R R M   +G
Sbjct: 510 KTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAG 569

Query: 361 LSKRFWGEAVHTAAYL 408
           LSK+FW EAV+TAAYL
Sbjct: 570 LSKKFWAEAVNTAAYL 585


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  188 bits (478), Expect = 6e-46
 Identities = 85/136 (62%), Positives = 107/136 (78%)
 Frame = +1

Query: 1    HADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRI 180
            H+D+WGPS   +  G RY+++ IDDFSRKVWV+ +K K +VF KFK WK ++E +TGK +
Sbjct: 808  HSDLWGPSPVESHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVV 867

Query: 181  KTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSG 360
            KTLRTDNGLEFCN  FD  C + GI RH+TV +TPQQNGVAERMN+TL++R R M   +G
Sbjct: 868  KTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAG 927

Query: 361  LSKRFWGEAVHTAAYL 408
            LSK+FW EAV+TAAYL
Sbjct: 928  LSKKFWAEAVNTAAYL 943


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score =  187 bits (474), Expect = 2e-45
 Identities = 81/136 (59%), Positives = 107/136 (78%)
 Frame = +1

Query: 1   HADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRI 180
           HAD+WGPS +P+ GG RY L+IIDD+SRKVW + +K+K D F  FKNWK++IE QT +++
Sbjct: 488 HADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERKV 547

Query: 181 KTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSG 360
           K LRTDNG EFC++ F++ C + GI RH T+P+TPQQNGVAERMNRT++ R R ML+ + 
Sbjct: 548 KLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSHAR 607

Query: 361 LSKRFWGEAVHTAAYL 408
           ++KRFW EA  TA YL
Sbjct: 608 MNKRFWAEAASTACYL 623


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77549942|gb|ABA92739.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1373

 Score =  187 bits (474), Expect = 2e-45
 Identities = 81/136 (59%), Positives = 107/136 (78%)
 Frame = +1

Query: 1   HADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRI 180
           HAD+WGPS +P+ GG RY L+IIDD+SRKVW + +K+K D F  FKNWK++IE QT +++
Sbjct: 488 HADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERKV 547

Query: 181 KTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSG 360
           K LRTDNG EFC++ F++ C + GI RH T+P+TPQQNGVAERMNRT++ R R ML+ + 
Sbjct: 548 KLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSHAR 607

Query: 361 LSKRFWGEAVHTAAYL 408
           ++KRFW EA  TA YL
Sbjct: 608 MNKRFWAEAASTACYL 623


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1278

 Score =  186 bits (473), Expect = 2e-45
 Identities = 81/136 (59%), Positives = 106/136 (77%)
 Frame = +1

Query: 1   HADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRI 180
           HAD+WGPS +P+ GG RY L+IIDD+SRKVW + +K+K D F  FK WK++IE QT K +
Sbjct: 489 HADLWGPSRKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMIERQTEKEV 548

Query: 181 KTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSG 360
           K LRTDN  EFC++ FD+ C + GI RH T+PYTPQQNGVAERMNRT++ + R ML+++ 
Sbjct: 549 KVLRTDNAGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISKARCMLSNAR 608

Query: 361 LSKRFWGEAVHTAAYL 408
           ++KRFW EA +TA YL
Sbjct: 609 MNKRFWAEAANTACYL 624


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score =  186 bits (473), Expect = 2e-45
 Identities = 80/136 (58%), Positives = 107/136 (78%)
 Frame = +1

Query: 1   HADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRI 180
           HAD+WGPS +P+ GG RY L++IDD+SRKVW + +K+K D F  FKNWK++IE QT +++
Sbjct: 488 HADLWGPSKKPSLGGARYMLTVIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERKV 547

Query: 181 KTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSG 360
           K LRTDNG EFC++ F++ C + GI RH T+P+TPQQNGVAERMNRT++ R R ML+ + 
Sbjct: 548 KLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSHAR 607

Query: 361 LSKRFWGEAVHTAAYL 408
           ++KRFW EA  TA YL
Sbjct: 608 MNKRFWAEAASTACYL 623


>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
          Length = 855

 Score =  184 bits (468), Expect = 8e-45
 Identities = 83/137 (60%), Positives = 105/137 (76%), Gaps = 1/137 (0%)
 Frame = +1

Query: 1   HADVWGPSS-EPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKR 177
           HAD+WG  +  P+  GN+YFLSIIDD SRKVW++ +++K + F+KF  WK L+ENQT KR
Sbjct: 183 HADLWGSQNVTPSMSGNKYFLSIIDDKSRKVWLYFLRSKDETFDKFCEWKELVENQTDKR 242

Query: 178 IKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSMLASS 357
           +K LRTDNGLEFCN  FD+ C ++GI RHKT  YTPQQNGVAERMNRT++E+VR +L  S
Sbjct: 243 VKCLRTDNGLEFCNIKFDSYCKKYGIERHKTCTYTPQQNGVAERMNRTVMEKVRCLLNES 302

Query: 358 GLSKRFWGEAVHTAAYL 408
           GL + FW E   TA Y+
Sbjct: 303 GLEEEFWAEVATTAVYI 319


>gb|AAD36943.1|AF069441_3 putative polyprotein [Arabidopsis thaliana]
           gi|7267195|emb|CAB77906.1| putative polyprotein
           [Arabidopsis thaliana]
          Length = 778

 Score =  184 bits (468), Expect = 8e-45
 Identities = 86/137 (62%), Positives = 103/137 (75%), Gaps = 1/137 (0%)
 Frame = +1

Query: 1   HADVWGPSSEPTQGGN-RYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKR 177
           H D+WG  + P   GN +YF+S IDD +RKV V+ +K K + FEKF +W  L+ENQ+G R
Sbjct: 391 HYDLWGAPTMPMALGNCQYFISFIDDHTRKVCVYFLKTKDEAFEKFVSWISLVENQSGNR 450

Query: 178 IKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSMLASS 357
           +KTLRTDNGLEFCN +FD  C E GI+RH+T PYTPQQNGV ERMNRT++ERVRSML  S
Sbjct: 451 VKTLRTDNGLEFCNRMFDGFCEERGIQRHRTCPYTPQQNGVVERMNRTIMERVRSMLCDS 510

Query: 358 GLSKRFWGEAVHTAAYL 408
            L KRFW EA HTA  L
Sbjct: 511 RLPKRFWAEATHTAVLL 527


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  184 bits (466), Expect = 1e-44
 Identities = 80/136 (58%), Positives = 106/136 (77%)
 Frame = +1

Query: 1   HADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRI 180
           HAD+WGPS +P+ GG RY L+IIDD+SRKVW + +K+K D F  FKNWK++IE QT +++
Sbjct: 490 HADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERKV 549

Query: 181 KTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSG 360
           K L TDNG EFC++ F++ C + GI RH T+P+TPQQNGVAERMNRT++ R R ML+ + 
Sbjct: 550 KLLCTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSHAR 609

Query: 361 LSKRFWGEAVHTAAYL 408
           ++KRFW EA  TA YL
Sbjct: 610 MNKRFWAEAASTACYL 625


>emb|CAA31653.1| polyprotein [Arabidopsis thaliana]
          Length = 1291

 Score =  183 bits (464), Expect = 2e-44
 Identities = 84/137 (61%), Positives = 105/137 (76%), Gaps = 1/137 (0%)
 Frame = +1

Query: 1   HADVWGPSS-EPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKR 177
           HAD+WG ++  P+  GN+YFLSIIDD +RKVW++ +++K + F++F  WK L+ENQ  K+
Sbjct: 510 HADLWGSTNVTPSLSGNKYFLSIIDDKTRKVWLYFLRSKDETFDRFCEWKELVENQQNKK 569

Query: 178 IKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSMLASS 357
           +K LRTDNGLEFCN  FD  C E GI RHKT  YTPQQNGVAERMNRT++E+VR ML  S
Sbjct: 570 VKCLRTDNGLEFCNLKFDAYCKEHGIERHKTCTYTPQQNGVAERMNRTIMEKVRCMLNES 629

Query: 358 GLSKRFWGEAVHTAAYL 408
           GL + FW EA  TAAYL
Sbjct: 630 GLGEEFWAEAAATAAYL 646


>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  183 bits (464), Expect = 2e-44
 Identities = 83/137 (60%), Positives = 106/137 (77%), Gaps = 1/137 (0%)
 Frame = +1

Query: 1   HADVWG-PSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKR 177
           HAD+WG P+  P+  G +YFLSIIDD +RKVW++ +K+K + F+KF  WK L+ENQ  K+
Sbjct: 500 HADLWGSPNVTPSISGKQYFLSIIDDKTRKVWLYFLKSKDETFDKFCEWKSLVENQVNKK 559

Query: 178 IKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSMLASS 357
           +K LRTDNGLEFCN+ FD+ C E GI RH+T  YTPQQNGVAERMNRT++E+VR +L  S
Sbjct: 560 VKCLRTDNGLEFCNSRFDSYCKEHGIERHRTCTYTPQQNGVAERMNRTIMEKVRCLLNKS 619

Query: 358 GLSKRFWGEAVHTAAYL 408
           G+ + FW EA  TAAYL
Sbjct: 620 GVEEVFWAEAAATAAYL 636


>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1156

 Score =  181 bits (460), Expect = 7e-44
 Identities = 79/136 (58%), Positives = 104/136 (76%)
 Frame = +1

Query: 1   HADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRI 180
           HAD+WGPS +P+ GG  Y L+IIDD+SRKVW + +K+K D F  FK WK++IE QT K +
Sbjct: 429 HADLWGPSRKPSLGGACYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMIERQTEKEV 488

Query: 181 KTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSG 360
           K LRTD+G EFC++ FD+ C + GI RH T+PYTPQQNGVAERMNRT++   R ML+++ 
Sbjct: 489 KVLRTDSGGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISNTRCMLSNAR 548

Query: 361 LSKRFWGEAVHTAAYL 408
           ++KRFW E  +TA YL
Sbjct: 549 MNKRFWAEVANTACYL 564


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1175

 Score =  181 bits (460), Expect = 7e-44
 Identities = 79/136 (58%), Positives = 104/136 (76%)
 Frame = +1

Query: 1   HADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRI 180
           HAD+WGPS +P+ GG RY L+IIDD+SRKVW + +K+K D F  FK WK++I+ QT K +
Sbjct: 384 HADLWGPSRKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMIKRQTEKEV 443

Query: 181 KTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSG 360
           K LRTDNG  FC++ FD+ C + GI  H T+PYTPQQNGVAERMNRT++ + R ML+++ 
Sbjct: 444 KVLRTDNGGGFCSDAFDDYCRKEGIVMHHTIPYTPQQNGVAERMNRTIISKARCMLSNAR 503

Query: 361 LSKRFWGEAVHTAAYL 408
           ++KRFW EA  TA YL
Sbjct: 504 MNKRFWAEAAKTACYL 519


>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
           gi|108708632|gb|ABF96427.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1326

 Score =  181 bits (460), Expect = 7e-44
 Identities = 80/136 (58%), Positives = 103/136 (75%)
 Frame = +1

Query: 1   HADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRI 180
           H D+WGPS +   GG RY L+IIDD+SRKVW + +K+K D F  FK WK+ IE QT K +
Sbjct: 489 HTDLWGPSRKAYLGGARYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVRIERQTEKEV 548

Query: 181 KTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSG 360
           K LRTDNG EFC++ FD+ C + GI RH T+PYTPQQNGVAERMNRT++ + R ML+++ 
Sbjct: 549 KVLRTDNGGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISKARCMLSNAR 608

Query: 361 LSKRFWGEAVHTAAYL 408
           ++KRFW EA +TA YL
Sbjct: 609 MNKRFWAEAANTACYL 624


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score =  181 bits (459), Expect = 9e-44
 Identities = 79/136 (58%), Positives = 106/136 (77%)
 Frame = +1

Query: 1   HADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRI 180
           H D WGP+  P+  G RYF+S+IDD+SRKVW++++K K    EKFK WK L+ENQ+  ++
Sbjct: 486 HIDHWGPAQVPSLSGGRYFMSLIDDYSRKVWIYILKIKDQALEKFKVWKSLVENQSDFKL 545

Query: 181 KTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSG 360
           K LRTDNGLEFC+ +F+  C + GI+RHKTV +TPQQNG+AERMNRTL+++ R ML +S 
Sbjct: 546 KCLRTDNGLEFCSKVFEEYCQKHGIKRHKTVRFTPQQNGLAERMNRTLVDKTRCMLINSK 605

Query: 361 LSKRFWGEAVHTAAYL 408
           L + FW EAV+TA+YL
Sbjct: 606 LPRSFWAEAVNTASYL 621