BLASTX nr result

ID: Rehmannia26_contig00014744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00014744
         (573 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004243753.1| PREDICTED: chloroplastic group IIA intron sp...    61   2e-07
ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron sp...    60   3e-07
ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron sp...    60   4e-07
emb|CBI27903.3| unnamed protein product [Vitis vinifera]               60   4e-07

>ref|XP_004243753.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Solanum lycopersicum]
          Length = 812

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 40/84 (47%), Positives = 45/84 (53%)
 Frame = +3

Query: 3   NYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXXXXXXXXXXXXXXDMMSANNHV 182
           NYQRP  FRP+NLLTKRQALARSIELQRREA                    D        
Sbjct: 726 NYQRPNEFRPKNLLTKRQALARSIELQRREALKHHITELQDKIQNLKSELEDTEMVEEID 785

Query: 183 AETSDSRTGDFSDDEDLEIVRNFE 254
            ET  SR  D SDDED ++ + F+
Sbjct: 786 EETLFSRL-DASDDED-DVEKQFD 807


>ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X1 [Solanum tuberosum]
           gi|565382761|ref|XP_006357700.1| PREDICTED:
           chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 820

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 39/76 (51%), Positives = 40/76 (52%)
 Frame = +3

Query: 3   NYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXXXXXXXXXXXXXXDMMSANNHV 182
           NYQRP  FRP+NLLTKRQALARSIELQRREA                    D        
Sbjct: 734 NYQRPNEFRPKNLLTKRQALARSIELQRREALKHHITALQDKIQNLKSELEDTNMVEEID 793

Query: 183 AETSDSRTGDFSDDED 230
            ET  SR  D SDDED
Sbjct: 794 EETLFSRL-DASDDED 808


>ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 884

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 37/79 (46%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
 Frame = +3

Query: 3    NYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXXXXXXXXXXXXXXDMMSANNHV 182
            NYQRP A RP+NLLTKRQALARSIELQR EA                    +M + N   
Sbjct: 773  NYQRPHALRPKNLLTKRQALARSIELQRHEALKHHISDLEERIKLLKSLPEEMKTGNGID 832

Query: 183  AETSDSR-TGDFSDDEDLE 236
             +   SR  G +S DED+E
Sbjct: 833  DKAFYSRLDGTYSTDEDME 851


>emb|CBI27903.3| unnamed protein product [Vitis vinifera]
          Length = 881

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 37/79 (46%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
 Frame = +3

Query: 3    NYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXXXXXXXXXXXXXXDMMSANNHV 182
            NYQRP A RP+NLLTKRQALARSIELQR EA                    +M + N   
Sbjct: 770  NYQRPHALRPKNLLTKRQALARSIELQRHEALKHHISDLEERIKLLKSLPEEMKTGNGID 829

Query: 183  AETSDSR-TGDFSDDEDLE 236
             +   SR  G +S DED+E
Sbjct: 830  DKAFYSRLDGTYSTDEDME 848


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