BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00014602
         (1458 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [V...   310   1e-81
ref|XP_006358519.1| PREDICTED: transcription factor PIF3-like [S...   307   8e-81
gb|EOY11780.1| Phytochrome interacting factor 3, putative isofor...   306   1e-80
ref|XP_004230368.1| PREDICTED: transcription factor PIF3-like [S...   305   2e-80
gb|EMJ08410.1| hypothetical protein PRUPE_ppa001899mg [Prunus pe...   304   5e-80
emb|CBI39676.3| unnamed protein product [Vitis vinifera]              302   2e-79
gb|EXB57555.1| hypothetical protein L484_022662 [Morus notabilis]     302   3e-79
gb|EOY11783.1| Phytochrome interacting factor 3, putative isofor...   302   3e-79
gb|EOY11781.1| Phytochrome interacting factor 3, putative isofor...   293   1e-76
ref|XP_002319450.2| hypothetical protein POPTR_0013s00310g [Popu...   288   3e-75
gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsa...   288   5e-75
gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsa...   288   5e-75
gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsa...   287   9e-75
gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsa...   285   4e-74
gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsa...   285   4e-74
gb|AEX32796.1| phytochrome-interacting factor 3 [Malus domestica]     283   1e-73
ref|XP_006382253.1| Phytochrome-interacting factor 3 family prot...   280   1e-72
ref|XP_002330047.1| predicted protein [Populus trichocarpa]           280   1e-72
ref|XP_006423961.1| hypothetical protein CICLE_v10027890mg [Citr...   279   2e-72
ref|XP_004302325.1| PREDICTED: transcription factor PIF3-like [F...   275   5e-71

>ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
          Length = 752

 Score =  310 bits (793), Expect = 1e-81
 Identities = 182/391 (46%), Positives = 232/391 (59%), Gaps = 17/391 (4%)
 Frame = +3

Query: 39   STFVERFDSAQKDNDFRVSSANV-AIVNSRQPVVNAHKDSCPPERTENLGQEMSVKNDKS 215
            S  V+     QKD D       V A V+ +  V    ++  P E++  + QE + KN+KS
Sbjct: 317  SRHVDSSCGLQKDVDSHSEPVMVPASVDLKPVVAKTMEEPLPAEQSPVICQEGACKNEKS 376

Query: 216  LIISNTADSTKGVPYGERVVEPMXXXXXXXXXXXXDRVSCEQTHNSKRKFRDTEESECRS 395
                  A + KG+P GE+ +EP             +R S +  HN KRK RDTEESEC S
Sbjct: 377  SNQVLGARTAKGIPDGEKTIEPAVACSSVCSGNSVERASNDPKHNLKRKCRDTEESECPS 436

Query: 396  DDIETESVGVKKTTHARG-SGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKAD 572
            +D+E ESVGV+K+  A+G +GSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK D
Sbjct: 437  EDVEEESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD 496

Query: 573  KASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQMMFPTGMQHMHPAHIPHFSPXXXXXXXX 752
            KASMLDEAIEYLKTLQLQVQIMSMG GLCMP MM PTGMQH+H AH+ HF P        
Sbjct: 497  KASMLDEAIEYLKTLQLQVQIMSMGTGLCMPPMMLPTGMQHIHAAHMGHFPPMGVGMGMG 556

Query: 753  XXXXXXXXXXXXXS-----PIFPVPPLQAPHFPS---SMPTNFQRMPGPNLPVYGHPGQG 908
                               P    PP+Q  HFP    S+P N   M G NL V+G PGQG
Sbjct: 557  MGMGYGMGMLDMNGGSPSCPFIQAPPMQGTHFPGRPISVPPNLHGMVGSNLQVFGLPGQG 616

Query: 909  LPNSVPRTPFVPLTGQPPVTSAMGSHNA-------VPSTSPIMNSGDPLTSGSSQLKGNA 1067
            +P S+P  P +P++G P + S+M  +++       VP ++P  +S D + + +SQ+  N 
Sbjct: 617  IPLSMPHAPLIPMSGSPLMKSSMALNDSGAAGSMEVPDSAPASSSKDLIQNVNSQVMQNN 676

Query: 1068 EAGSSINQKTNQLQATNEVLNQSAATQENKQ 1160
            +A SS+        A+++   QSA  Q+N Q
Sbjct: 677  DANSSM--------ASSQCQEQSALVQKNDQ 699


>ref|XP_006358519.1| PREDICTED: transcription factor PIF3-like [Solanum tuberosum]
          Length = 716

 Score =  307 bits (786), Expect = 8e-81
 Identities = 189/401 (47%), Positives = 234/401 (58%), Gaps = 19/401 (4%)
 Frame = +3

Query: 51   ERFDSAQKDNDFRVSSANV-AIVNSRQPVVNAHKDSCPPERTENLGQEMSVKNDKSLIIS 227
            E + +++KDN     +  V + + SR    + H  SC  E+++N  ++ S  ND +    
Sbjct: 317  ENYLTSKKDNVPHYPTNGVPSQLESRPSGASFHDRSCQVEQSDNAFRDCSSNNDNTRDQF 376

Query: 228  NTADSTKGVPYGERVVEPMXXXXXXXXXXXXDRVSCEQTHNSKRKFRDTEESECRSDDIE 407
              A +TK +  GER VE              +R S +Q  N KRK RD EESECRS+D+E
Sbjct: 377  TGAKATKDIADGERNVEHGVACSSVCSGSSAERGSSDQPLNLKRKTRDNEESECRSEDVE 436

Query: 408  TESVGVKKTTHARG-SGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASM 584
             ESVG+KKT  ARG +GSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASM
Sbjct: 437  EESVGIKKTCAARGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASM 496

Query: 585  LDEAIEYLKTLQLQVQIMSMGAGLCMPQMMFPTGMQHMHPAHIPHFSPXXXXXXXXXXXX 764
            LDEAIEYLKTLQLQVQIMSMG G C+P MMFPTG+QHMH A +PHF+P            
Sbjct: 497  LDEAIEYLKTLQLQVQIMSMGTGFCVPPMMFPTGVQHMHGAQMPHFAPMSLGMGMGMGMG 556

Query: 765  XXXXXXXXXS-------PIFPVPPLQAPHFPSSMPTNFQRMPG---PNLPVYGHPGQGLP 914
                             P++P+P +Q  HFPS         PG    N   Y HPGQGLP
Sbjct: 557  MGFGMGMLEMNGRSSGYPMYPMPSVQGGHFPSPPIPASTAYPGIAVSNRHAYAHPGQGLP 616

Query: 915  NSVPRTPFVPLTGQPPVTSAMGSHNA-------VPSTSPIMNSGDPLTSGSSQLKGNAEA 1073
             S+PR    PL GQP   +A+  + A       + S  P ++S  P+   +SQ+  NAEA
Sbjct: 617  MSIPRASLGPLAGQPSTGAAVPMNVARAGVPVEIRSAPPNLDSKTPVHK-NSQIVQNAEA 675

Query: 1074 GSSINQKTNQLQATNEVLNQSAATQENKQPAGASGPATLTS 1196
                NQ  +Q+QATNEVL +SA   +    A  S    LT+
Sbjct: 676  SRPQNQTCSQVQATNEVLEKSAQKNDQLPDAIDSAANRLTN 716


>gb|EOY11780.1| Phytochrome interacting factor 3, putative isoform 1 [Theobroma
            cacao]
          Length = 729

 Score =  306 bits (785), Expect = 1e-80
 Identities = 184/404 (45%), Positives = 230/404 (56%), Gaps = 13/404 (3%)
 Frame = +3

Query: 39   STFVERFDSAQKDNDFRVSSANVAIVNSR-QPVVNAHKDSCPPERTENLGQEMSVKNDKS 215
            +TF++     QK+   +     V +   R +    +  +    E  + + +E + KN K+
Sbjct: 321  TTFIDSSIDLQKEKFSQCQPTIVLMKTDRKESKAKSLDEPVTAEPIDAICEENTPKNVKN 380

Query: 216  LIISNTADSTKGVPYGERVVEPMXXXXXXXXXXXXDRVSCEQTHNSKRKFRDTEESECRS 395
                    ++KG+P G++ VEP+            +R S +  +N KRK RD EESEC S
Sbjct: 381  PSQVTGESASKGLPDGDKTVEPVLAASSVCSGNSVERASDDPVYNLKRKSRDNEESECPS 440

Query: 396  DDIETESVGVKKTTHARG-SGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKAD 572
            +D E ESVGVKK   ARG SGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK D
Sbjct: 441  EDAEEESVGVKKAVPARGGSGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD 500

Query: 573  KASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQMMFPTGMQHMHPAHIPHFSPXXXXXXXX 752
            KASMLDEAIEYLKTLQLQVQIMSMGAGL MP MM PTGMQHMH AH+ HFSP        
Sbjct: 501  KASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMLPTGMQHMHAAHMAHFSPMGVGLGMG 560

Query: 753  XXXXXXXXXXXXXS---PIFPVPPLQAPHFPSSMPTNFQRMPGPNLPVYGHPGQGLPNSV 923
                         S   P+  VPP+    F    PT  Q M G NL ++G PGQGLP S+
Sbjct: 561  MGFGMPLPDMNAGSSARPMVQVPPIHGAPFSGPGPTALQGMAGSNLQLFGLPGQGLPMSM 620

Query: 924  PRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMNSG--------DPLTSGSSQLKGNAEAGS 1079
            P TP +P++G   +  AMG  +A     P+ N G        DP+ + +SQ+  N    S
Sbjct: 621  PHTPLIPISGGHLMKPAMGL-SACGLVGPMDNMGSATASSSKDPVQNINSQVAQNTNVNS 679

Query: 1080 SINQKTNQLQATNEVLNQSAATQENKQPAGASGPATLTSTTSTD 1211
            S+NQ  +Q   TN+   Q AA QEN Q +  +G     S    +
Sbjct: 680  SMNQTPSQCPTTNQSFEQPAAVQENGQASEITGSVPFRSADGNE 723


>ref|XP_004230368.1| PREDICTED: transcription factor PIF3-like [Solanum lycopersicum]
          Length = 723

 Score =  305 bits (782), Expect = 2e-80
 Identities = 192/403 (47%), Positives = 238/403 (59%), Gaps = 15/403 (3%)
 Frame = +3

Query: 51   ERFDSAQKDNDFRVSSANVAI-VNSRQPVVNAHKDSCPPERTENLGQEMSVKNDKSLIIS 227
            E F +++KDN     +  V+  + SR    + H  SC  E+++N  ++ S  ND +    
Sbjct: 317  ENFLTSKKDNFPHYPTNGVSSQLESRPSGASFHDRSCQAEQSDNAFRDCSSNNDNTHDHF 376

Query: 228  NTADSTKGVPYGERVVEPMXXXXXXXXXXXXDRVSCEQTHNSKRKFRDTEESECRSDDIE 407
             +A +TK +  GER VE              +R S +Q  N KRK RD EE ECRS+D+E
Sbjct: 377  TSAKATKDIADGERNVEHGVACSSVCSGSSAERGSSDQPLNLKRKTRDNEEFECRSEDVE 436

Query: 408  TESVGVKKTTHARG-SGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASM 584
             ESVG+KK   ARG +GSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASM
Sbjct: 437  EESVGIKKPCAARGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASM 496

Query: 585  LDEAIEYLKTLQLQVQIMSMGAGLCMPQMMFPTGMQHMHPAHIPHFSPXXXXXXXXXXXX 764
            LDEAIEYLKTLQLQVQIMS+GAGLC+P MMFP  MQHMH A +PHFSP            
Sbjct: 497  LDEAIEYLKTLQLQVQIMSVGAGLCVPPMMFP--MQHMHGAQMPHFSPMSLGMGMGMGFG 554

Query: 765  XXXXXXXXXS---PIFPVPPLQAPHFPSSMPTNFQRMPG---PNLPVYGHPGQGLPNSVP 926
                     S   P++P+P +Q  HFPS         PG    N  V+ HPGQGLP S+P
Sbjct: 555  LGMLEMNGRSSGYPMYPMPSVQGGHFPSPPIPASTAYPGIAVSNRHVFAHPGQGLPMSIP 614

Query: 927  RTPFVPLTGQPPVTSAMGSHNA-------VPSTSPIMNSGDPLTSGSSQLKGNAEAGSSI 1085
            R    PL GQP   +A+  + A       +    P ++S  P+   +SQ+  NAEA    
Sbjct: 615  RASLGPLAGQPSTGAAVPMNVAREGVPVEIRGAQPNLDSKTPVHK-NSQIVQNAEASCPQ 673

Query: 1086 NQKTNQLQATNEVLNQSAATQENKQPAGASGPATLTSTTSTDI 1214
            NQ  +Q+QATNEVL +SA  Q+N Q     G A    T  T++
Sbjct: 674  NQTCSQVQATNEVLEKSA--QKNDQLPDVIGSAANRLTNRTNV 714


>gb|EMJ08410.1| hypothetical protein PRUPE_ppa001899mg [Prunus persica]
          Length = 744

 Score =  304 bits (779), Expect = 5e-80
 Identities = 186/411 (45%), Positives = 233/411 (56%), Gaps = 19/411 (4%)
 Frame = +3

Query: 39   STFVERFDSAQKDNDFRVSSANVAIVNSRQPV-VNAHKDSCPPERTENLGQEMSVKNDKS 215
            ST ++      K+++ +     V      +P      ++SC  +++E   QE + KND +
Sbjct: 314  STLIDSSSGLSKESNSQCQHITVTSNVELKPTEAKPLEESCAAKQSEAACQEDASKNDTN 373

Query: 216  LIISNTADSTKGVPYGERVVEPMXXXXXXXXXXXXDRVSCEQTHNSKRKFRDTEESECRS 395
                    + + +  GE+ +EP+            +R S + TH  KRK RDT+ESEC S
Sbjct: 374  TNHIPCESANRVLRDGEKTLEPVVASSVCSGNSV-ERGSDDPTHALKRKSRDTDESECHS 432

Query: 396  DDIETESVGVKKTTHARGSGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKADK 575
            DD+E ESVGVKK  HARG GSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK DK
Sbjct: 433  DDVEEESVGVKKIAHARGMGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK 492

Query: 576  ASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQMMFPTGMQHMHPAHIPHFSPXXXXXXXXX 755
            ASMLDEAIEYLKTLQLQVQIMSMGAGL MP MMFP GMQHMH   + HFSP         
Sbjct: 493  ASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMFPAGMQHMHAPRMAHFSPMGLGMGMGM 552

Query: 756  XXXXXXXXXXXXS-------PIFPVPPLQAPHFPSSM---PTNFQRMPGPNLPVYGHPGQ 905
                                P+  VPP+Q  HFP+S     T F  M G NL ++G PGQ
Sbjct: 553  GLGMGFGMGMPDMNGGSSSFPMLQVPPMQGAHFPNSPMAGHTAFNGMVGSNLQMFGLPGQ 612

Query: 906  GLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMNSGDPLTSGS--------SQLKG 1061
            G+P  + R P VP +G P + S++G  NA  +  P+ N+     SGS        SQ+  
Sbjct: 613  GVPMPMQRPPLVPSSGGPFMKSSVGL-NACGAGGPMENAESTPVSGSKDSVQNMNSQVVQ 671

Query: 1062 NAEAGSSINQKTNQLQATNEVLNQSAATQENKQPAGASGPATLTSTTSTDI 1214
            N  A SS+NQ ++Q QATNE   Q A  + N Q A         S++  D+
Sbjct: 672  NTNANSSMNQTSSQCQATNEGFGQPALVRNNVQAADVDNNRANRSSSGNDV 722


>emb|CBI39676.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score =  302 bits (774), Expect = 2e-79
 Identities = 171/346 (49%), Positives = 213/346 (61%), Gaps = 16/346 (4%)
 Frame = +3

Query: 186  QEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXXXXDRVSCEQTHNSKRKF 365
            QE + KN+KS      A + KG+P GE+ +EP             +R S +  HN KRK 
Sbjct: 231  QEGACKNEKSSNQVLGARTAKGIPDGEKTIEPAVACSSVCSGNSVERASNDPKHNLKRKC 290

Query: 366  RDTEESECRSDDIETESVGVKKTTHARG-SGSKRSRAAEVHNLSERRRRDRINEKMRALQ 542
            RDTEESEC S+D+E ESVGV+K+  A+G +GSKRSRAAEVHNLSERRRRDRINEKMRALQ
Sbjct: 291  RDTEESECPSEDVEEESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQ 350

Query: 543  ELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQMMFPTGMQHMHPAHIPHF 722
            ELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMG GLCMP MM PTGMQH+H AH+ HF
Sbjct: 351  ELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGTGLCMPPMMLPTGMQHIHAAHMGHF 410

Query: 723  SPXXXXXXXXXXXXXXXXXXXXXS-----PIFPVPPLQAPHFPS---SMPTNFQRMPGPN 878
             P                           P    PP+Q  HFP    S+P N   M G N
Sbjct: 411  PPMGVGMGMGMGMGYGMGMLDMNGGSPSCPFIQAPPMQGTHFPGRPISVPPNLHGMVGSN 470

Query: 879  LPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNA-------VPSTSPIMNSGDPLT 1037
            L V+G PGQG+P S+P  P +P++G P + S+M  +++       VP ++P  +S D + 
Sbjct: 471  LQVFGLPGQGIPLSMPHAPLIPMSGSPLMKSSMALNDSGAAGSMEVPDSAPASSSKDLIQ 530

Query: 1038 SGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQPAGAS 1175
            + +SQ+  N +A SS+        A+++   QSA  Q+N Q    S
Sbjct: 531  NVNSQVMQNNDANSSM--------ASSQCQEQSALVQKNDQAPDVS 568


>gb|EXB57555.1| hypothetical protein L484_022662 [Morus notabilis]
          Length = 758

 Score =  302 bits (773), Expect = 3e-79
 Identities = 187/399 (46%), Positives = 224/399 (56%), Gaps = 33/399 (8%)
 Frame = +3

Query: 114  VNSRQPVVNAHKDSCPPERTENLGQEMSVKNDKSLIISNT---ADSTKGVPYGERVVEPM 284
            VN +     + ++ C  + +E + +E + KND    I+N+     + + +P GE+ +EP+
Sbjct: 341  VNLKPSEARSLEEPCAAKDSEAVCREDASKND----INNSFPCESTNRALPDGEKNIEPV 396

Query: 285  XXXXXXXXXXXXDRVSCEQTHNSKRKFRDTEESECRSDDIETESVGVKKTTHARGSGSKR 464
                        +R S + TH  KRKFRDTE+SEC S+D+E ESVGVKKT   R SGSKR
Sbjct: 397  VASSSVCSGNSVERASDDPTHVLKRKFRDTEDSECHSEDVEEESVGVKKTAPPRASGSKR 456

Query: 465  SRAAEVHNLSER-------------RRRDRINEKMRALQELIPNCNKADKASMLDEAIEY 605
            SRAAEVHNLSER             RRRDRINEKMRALQELIPNCNK DKASMLDEAIEY
Sbjct: 457  SRAAEVHNLSERILNGFFIFHLSEQRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEY 516

Query: 606  LKTLQLQVQIMSMGAGLCMPQMMFPTGMQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXX 785
            LKTLQLQVQIMSMGAGLCMP MM PTGMQ MH  H+ HF P                   
Sbjct: 517  LKTLQLQVQIMSMGAGLCMPPMMLPTGMQPMHAPHMTHFLPMGVGMGMGLGMGFGMGMPD 576

Query: 786  XXS-----PIFPVPPLQAPHFPS-SMPTN---FQRMPGPNLPVYGHPGQGLPNSVPRTPF 938
                    P+F  PP+Q  HFP   MP +   F  M GPNL V+G PGQGL   + R P 
Sbjct: 577  MNGGSSGYPMFQFPPMQGAHFPGPPMPGHTAAFHGMTGPNLQVFGLPGQGLSMPMQRAPL 636

Query: 939  VPLTGQPPVTSAM--------GSHNAVPSTSPIMNSGDPLTSGSSQLKGNAEAGSSINQK 1094
            VP+ G P + SAM        GS   + ST P   S DP  +  S +  NA   SS+NQ 
Sbjct: 637  VPVLGGPFMKSAMGLNASGAGGSMENMESTQP-YTSKDPAQNMGSHVVQNAGPSSSMNQT 695

Query: 1095 TNQLQATNEVLNQSAATQENKQPAGASGPATLTSTTSTD 1211
             +Q QATNE   QS   Q N Q +  +G     S    D
Sbjct: 696  NSQCQATNEGFEQSPLVQSNVQVSDVNGNKASASANGND 734


>gb|EOY11783.1| Phytochrome interacting factor 3, putative isoform 4 [Theobroma
            cacao]
          Length = 730

 Score =  302 bits (773), Expect = 3e-79
 Identities = 184/405 (45%), Positives = 230/405 (56%), Gaps = 14/405 (3%)
 Frame = +3

Query: 39   STFVERFDSAQKDNDFRVSSANVAIVNSR-QPVVNAHKDSCPPERTENLGQEMSVKNDKS 215
            +TF++     QK+   +     V +   R +    +  +    E  + + +E + KN K+
Sbjct: 321  TTFIDSSIDLQKEKFSQCQPTIVLMKTDRKESKAKSLDEPVTAEPIDAICEENTPKNVKN 380

Query: 216  LIISNTADSTKGVPYGERVVEPMXXXXXXXXXXXXDRVSCEQTHNSKRKFRDTEESECRS 395
                    ++KG+P G++ VEP+            +R S +  +N KRK RD EESEC S
Sbjct: 381  PSQVTGESASKGLPDGDKTVEPVLAASSVCSGNSVERASDDPVYNLKRKSRDNEESECPS 440

Query: 396  DDIETESVGVKKTTHARG-SGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-A 569
            +D E ESVGVKK   ARG SGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK  
Sbjct: 441  EDAEEESVGVKKAVPARGGSGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKKV 500

Query: 570  DKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQMMFPTGMQHMHPAHIPHFSPXXXXXXX 749
            DKASMLDEAIEYLKTLQLQVQIMSMGAGL MP MM PTGMQHMH AH+ HFSP       
Sbjct: 501  DKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMLPTGMQHMHAAHMAHFSPMGVGLGM 560

Query: 750  XXXXXXXXXXXXXXS---PIFPVPPLQAPHFPSSMPTNFQRMPGPNLPVYGHPGQGLPNS 920
                          S   P+  VPP+    F    PT  Q M G NL ++G PGQGLP S
Sbjct: 561  GMGFGMPLPDMNAGSSARPMVQVPPIHGAPFSGPGPTALQGMAGSNLQLFGLPGQGLPMS 620

Query: 921  VPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMNSG--------DPLTSGSSQLKGNAEAG 1076
            +P TP +P++G   +  AMG  +A     P+ N G        DP+ + +SQ+  N    
Sbjct: 621  MPHTPLIPISGGHLMKPAMGL-SACGLVGPMDNMGSATASSSKDPVQNINSQVAQNTNVN 679

Query: 1077 SSINQKTNQLQATNEVLNQSAATQENKQPAGASGPATLTSTTSTD 1211
            SS+NQ  +Q   TN+   Q AA QEN Q +  +G     S    +
Sbjct: 680  SSMNQTPSQCPTTNQSFEQPAAVQENGQASEITGSVPFRSADGNE 724


>gb|EOY11781.1| Phytochrome interacting factor 3, putative isoform 2 [Theobroma
            cacao]
          Length = 731

 Score =  293 bits (750), Expect = 1e-76
 Identities = 176/377 (46%), Positives = 220/377 (58%), Gaps = 13/377 (3%)
 Frame = +3

Query: 39   STFVERFDSAQKDNDFRVSSANVAIVNSR-QPVVNAHKDSCPPERTENLGQEMSVKNDKS 215
            +TF++     QK+   +     V +   R +    +  +    E  + + +E + KN K+
Sbjct: 321  TTFIDSSIDLQKEKFSQCQPTIVLMKTDRKESKAKSLDEPVTAEPIDAICEENTPKNVKN 380

Query: 216  LIISNTADSTKGVPYGERVVEPMXXXXXXXXXXXXDRVSCEQTHNSKRKFRDTEESECRS 395
                    ++KG+P G++ VEP+            +R S +  +N KRK RD EESEC S
Sbjct: 381  PSQVTGESASKGLPDGDKTVEPVLAASSVCSGNSVERASDDPVYNLKRKSRDNEESECPS 440

Query: 396  DDIETESVGVKKTTHARG-SGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKAD 572
            +D E ESVGVKK   ARG SGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK D
Sbjct: 441  EDAEEESVGVKKAVPARGGSGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD 500

Query: 573  KASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQMMFPTGMQHMHPAHIPHFSPXXXXXXXX 752
            KASMLDEAIEYLKTLQLQVQIMSMGAGL MP MM PTGMQHMH AH+ HFSP        
Sbjct: 501  KASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMLPTGMQHMHAAHMAHFSPMGVGLGMG 560

Query: 753  XXXXXXXXXXXXXS---PIFPVPPLQAPHFPSSMPTNFQRMPGPNLPVYGHPGQGLPNSV 923
                         S   P+  VPP+    F    PT  Q M G NL ++G PGQGLP S+
Sbjct: 561  MGFGMPLPDMNAGSSARPMVQVPPIHGAPFSGPGPTALQGMAGSNLQLFGLPGQGLPMSM 620

Query: 924  PRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMNSG--------DPLTSGSSQLKGNAEAGS 1079
            P TP +P++G   +  AMG  +A     P+ N G        DP+ + +SQ+  N    S
Sbjct: 621  PHTPLIPISGGHLMKPAMGL-SACGLVGPMDNMGSATASSSKDPVQNINSQVAQNTNVNS 679

Query: 1080 SINQKTNQLQATNEVLN 1130
            S+NQ  + +Q   +VLN
Sbjct: 680  SMNQTPSSVQQQIKVLN 696


>ref|XP_002319450.2| hypothetical protein POPTR_0013s00310g [Populus trichocarpa]
            gi|550324617|gb|EEE95373.2| hypothetical protein
            POPTR_0013s00310g [Populus trichocarpa]
          Length = 713

 Score =  288 bits (738), Expect = 3e-75
 Identities = 174/374 (46%), Positives = 212/374 (56%), Gaps = 13/374 (3%)
 Frame = +3

Query: 135  VNAHKDSCPPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXX 314
            V   + S P E  E + QE   K+D++   +    + KG+   E+  EP+          
Sbjct: 333  VKPAEGSVPAELPEEMSQEGDSKSDRNCHQNFGESAIKGLEDVEKTTEPLVASSSVGSGN 392

Query: 315  XXDRVSCEQTHNSKRKFRDTEESECRSDDIETESVGVKKTTHAR-GSGSKRSRAAEVHNL 491
              +R S + T N KRK RDTEESE  S+D E ESVG KK   AR G+GSKR RAAEVHNL
Sbjct: 393  SAERPSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNL 452

Query: 492  SERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQM 671
            SERRRRDRINEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMGAG+ MP M
Sbjct: 453  SERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGMYMPSM 512

Query: 672  MFPTGMQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS-PIFPVPPLQAPHFPSSM- 845
            M P GM HMH AH+  F P                       P++ VPP+   HFP S  
Sbjct: 513  MLPPGMPHMHAAHMGQFLPMGVGMGMGFRMGMPDMNGGYSGCPMYQVPPMHGAHFPGSQM 572

Query: 846  --PTNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMN 1019
              P+    M GP+L ++G  GQGLP S PR P +P++G PP        NA     P+ N
Sbjct: 573  SGPSALHGMGGPSLQMFGLSGQGLPMSFPRAPLMPMSGGPP-PKTNREPNACGVVGPMDN 631

Query: 1020 --------SGDPLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQPAGAS 1175
                    S D + + +SQ+  N  A  S+NQ ++Q QATNE   Q A  Q N + +  +
Sbjct: 632  LDSATASSSKDAIQNINSQVMQNNVANRSMNQTSSQCQATNECFEQPAFAQNNGEGSEVA 691

Query: 1176 GPATLTSTTSTDIS 1217
                L S   TDI+
Sbjct: 692  ESGVLKSAGGTDIT 705


>gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
            gi|339778393|gb|AEK06078.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778395|gb|AEK06079.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778399|gb|AEK06081.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778401|gb|AEK06082.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778405|gb|AEK06084.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778407|gb|AEK06085.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778409|gb|AEK06086.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778411|gb|AEK06087.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778413|gb|AEK06088.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778415|gb|AEK06089.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778417|gb|AEK06090.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778419|gb|AEK06091.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778421|gb|AEK06092.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778423|gb|AEK06093.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778425|gb|AEK06094.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778427|gb|AEK06095.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778429|gb|AEK06096.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
          Length = 589

 Score =  288 bits (736), Expect = 5e-75
 Identities = 177/382 (46%), Positives = 215/382 (56%), Gaps = 15/382 (3%)
 Frame = +3

Query: 135  VNAHKDSCPPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXX 314
            V   + S P E  E + QE   K+D++   +    + KG+   E+  EP+          
Sbjct: 209  VKPAEGSVPAELPEEMSQEGDSKSDRNCHQNFGESAIKGLEDVEKTTEPLVASSSVGSGN 268

Query: 315  XXDRVSCEQTHNSKRKFRDTEESECRSDDIETESVGVKKTTHAR-GSGSKRSRAAEVHNL 491
              +R S + T N KRK RDTEESE  S+D E ESVG KK   AR G+GSKR RAAEVHNL
Sbjct: 269  SAERPSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNL 328

Query: 492  SERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQM 671
            SERRRRDRINEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMGAG+ MP M
Sbjct: 329  SERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGMYMPSM 388

Query: 672  MFPTGMQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS-PIFPVPPLQAPHFPSSM- 845
            M P GM HMH AH+  F P                       P++ VPP+   HFP S  
Sbjct: 389  MLPPGMPHMHAAHMGQFLPMGVGMGMGFRMGMPDMNGGYSGCPMYQVPPMHGAHFPGSPM 448

Query: 846  --PTNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMN 1019
              P+    M GP+L ++G  GQGLP S PR P +P++G PP        NA     P+ N
Sbjct: 449  SGPSALHGMGGPSLQMFGLSGQGLPMSFPRAPLMPMSGGPP-PKTNREPNACGVVGPMDN 507

Query: 1020 --------SGDPLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQPAGAS 1175
                    S D + + +SQ+  N  A  S+NQ ++Q QATNE   Q A  Q N + +  +
Sbjct: 508  LDSATASSSKDAIQNINSQVMQNNVANRSMNQTSSQCQATNECFEQPAFAQNNGEGSEVA 567

Query: 1176 GPATLTSTTSTDI--SKEPGFD 1235
                L S   TDI  S+  G D
Sbjct: 568  ESGVLKSAGGTDIIPSRATGCD 589


>gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
          Length = 589

 Score =  288 bits (736), Expect = 5e-75
 Identities = 177/382 (46%), Positives = 215/382 (56%), Gaps = 15/382 (3%)
 Frame = +3

Query: 135  VNAHKDSCPPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXX 314
            V   + S P E  E + QE   K+D++   +    + KG+   E+  EP+          
Sbjct: 209  VKPAEGSVPAELPEEMSQEGDSKSDRNCHQNFGESAIKGLEDVEKTTEPLVASSSVGSGN 268

Query: 315  XXDRVSCEQTHNSKRKFRDTEESECRSDDIETESVGVKKTTHAR-GSGSKRSRAAEVHNL 491
              +R S + T N KRK RDTEESE  S+D E ESVG KK   AR G+GSKR RAAEVHNL
Sbjct: 269  SAERPSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNL 328

Query: 492  SERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQM 671
            SERRRRDRINEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMGAG+ MP M
Sbjct: 329  SERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGIYMPSM 388

Query: 672  MFPTGMQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS-PIFPVPPLQAPHFPSSM- 845
            M P GM HMH AH+  F P                       P++ VPP+   HFP S  
Sbjct: 389  MLPPGMPHMHAAHMGQFLPMGVGMGMGFRMGMPDMNGGYSGCPMYQVPPMHGAHFPGSPM 448

Query: 846  --PTNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMN 1019
              P+    M GP+L ++G  GQGLP S PR P +P++G PP        NA     P+ N
Sbjct: 449  SGPSALHGMGGPSLQMFGLSGQGLPMSFPRAPLMPMSGGPP-PKTNREPNACGVVGPMDN 507

Query: 1020 --------SGDPLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQPAGAS 1175
                    S D + + +SQ+  N  A  S+NQ ++Q QATNE   Q A  Q N + +  +
Sbjct: 508  LDSATASSSKDAIQNINSQVMRNNVANRSMNQTSSQCQATNECFEQPAFAQNNGEGSEVA 567

Query: 1176 GPATLTSTTSTDI--SKEPGFD 1235
                L S   TDI  S+  G D
Sbjct: 568  ESGVLKSAGGTDIIPSRATGCD 589


>gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
          Length = 589

 Score =  287 bits (734), Expect = 9e-75
 Identities = 177/382 (46%), Positives = 214/382 (56%), Gaps = 15/382 (3%)
 Frame = +3

Query: 135  VNAHKDSCPPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXX 314
            V   + S P E  E + QE   K+D++   +    + KG+   E+  EP+          
Sbjct: 209  VKPAEGSVPAELPEEMSQEGDSKSDRNCHQNFGESAIKGLEDVEKTTEPLVASSSVGSGN 268

Query: 315  XXDRVSCEQTHNSKRKFRDTEESECRSDDIETESVGVKKTTHAR-GSGSKRSRAAEVHNL 491
              +R S + T N KRK RDTEESE  S+D E ESVG KK   AR G+GSKR RAAEVHNL
Sbjct: 269  SAERPSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNL 328

Query: 492  SERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQM 671
            SERRRRDRINEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMGAG+ MP M
Sbjct: 329  SERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGMYMPSM 388

Query: 672  MFPTGMQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS-PIFPVPPLQAPHFPSSM- 845
            M P GM HMH AH+  F P                       P++ VPP+   HFP S  
Sbjct: 389  MLPPGMPHMHAAHMGQFLPMGVGMGMGFRMGMPDMNGGYSGCPMYQVPPMHGAHFPGSPM 448

Query: 846  --PTNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMN 1019
              P+    M GP+L ++G  GQGLP   PR P +P++G PP        NA     P+ N
Sbjct: 449  SGPSALHGMGGPSLQMFGLSGQGLPMPFPRAPLMPMSGGPP-PKTNREPNACGVVGPMDN 507

Query: 1020 --------SGDPLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQPAGAS 1175
                    S D + + +SQ+  N  A  SINQ ++Q QATNE   Q A  Q N + +  +
Sbjct: 508  LDSATASSSKDAIQNINSQVMQNNVANRSINQTSSQCQATNECFEQPAFAQNNGEGSEVA 567

Query: 1176 GPATLTSTTSTDI--SKEPGFD 1235
                L S   TDI  S+  G D
Sbjct: 568  ESGVLKSAGGTDIIPSRATGCD 589


>gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
          Length = 589

 Score =  285 bits (728), Expect = 4e-74
 Identities = 176/382 (46%), Positives = 214/382 (56%), Gaps = 15/382 (3%)
 Frame = +3

Query: 135  VNAHKDSCPPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXX 314
            V   + S P E  E + QE   K+D++   +    + KG+   E+  EP+          
Sbjct: 209  VKPAEGSVPAELPEEMSQEGDSKSDRNCHQNFGESAIKGLEDVEKTTEPLVASSSVGSGN 268

Query: 315  XXDRVSCEQTHNSKRKFRDTEESECRSDDIETESVGVKKTTHAR-GSGSKRSRAAEVHNL 491
              +R S + T N KRK RDTEESE  S+D E ESVG KK   AR G+GSKR RAAEVHNL
Sbjct: 269  SAERPSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNL 328

Query: 492  SERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQM 671
            SERRRRDRINEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMGAG+ MP M
Sbjct: 329  SERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGMYMPSM 388

Query: 672  MFPTGMQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS-PIFPVPPLQAPHFPSSM- 845
            M P GM HMH AH+  F P                       P++ VPP+   HFP S  
Sbjct: 389  MLPPGMPHMHAAHMGQFLPMGVGMGMGFRMGMPDMNGGYSGCPMYQVPPMHGAHFPGSPM 448

Query: 846  --PTNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMN 1019
              P+    M G +L ++G  GQGLP S PR P +P++G PP        NA     P+ N
Sbjct: 449  SGPSALHGMGGSSLQMFGLSGQGLPMSFPRAPLMPMSGGPP-PKTNREPNACGVVGPMDN 507

Query: 1020 --------SGDPLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQPAGAS 1175
                    S D + + +SQ+  N  A  S+NQ ++Q QATNE   Q A  Q N + +  +
Sbjct: 508  LDSATASSSKDAIQNINSQVMQNNVANRSMNQTSSQCQATNECFEQPAFAQNNGEGSEVA 567

Query: 1176 GPATLTSTTSTDI--SKEPGFD 1235
                L S   TDI  S+  G D
Sbjct: 568  ESGVLKSAGGTDIIPSRATGCD 589


>gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
          Length = 589

 Score =  285 bits (728), Expect = 4e-74
 Identities = 176/382 (46%), Positives = 214/382 (56%), Gaps = 15/382 (3%)
 Frame = +3

Query: 135  VNAHKDSCPPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXX 314
            V   + S P E  E + QE   K+D++   +    + KG+   E+  EP+          
Sbjct: 209  VKPAEGSVPAELPEEMSQEGDSKSDRNCHQNFGESAIKGLEDVEKTTEPLVASSSVGSGN 268

Query: 315  XXDRVSCEQTHNSKRKFRDTEESECRSDDIETESVGVKKTTHAR-GSGSKRSRAAEVHNL 491
              +R S + T N KRK RDTEESE  S+D E ESVG KK   AR G+GSKR RAAEVHNL
Sbjct: 269  SAERPSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNL 328

Query: 492  SERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQM 671
            SERRRRDRINEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMGAG+ MP M
Sbjct: 329  SERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGMYMPSM 388

Query: 672  MFPTGMQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS-PIFPVPPLQAPHFPSSM- 845
            M P GM HMH AH+  F P                       P++ V P+   HFP S  
Sbjct: 389  MLPPGMPHMHAAHMGQFLPMGVGMGMGFRMGMPDMNGGYSGCPMYQVSPMHGAHFPGSPM 448

Query: 846  --PTNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMN 1019
              P+    M GP+L ++G  GQGLP S PR P +P++G PP        NA     P+ N
Sbjct: 449  SGPSALHGMGGPSLQMFGLSGQGLPMSFPRAPLMPMSGGPP-PKTNREPNACGVVGPMDN 507

Query: 1020 --------SGDPLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQPAGAS 1175
                    S D + + +SQ+  N  A  S+NQ ++Q QATNE   Q A  Q N + +  +
Sbjct: 508  LDSATASSSKDAIQNINSQVMQNNVANRSMNQTSSQCQATNECFEQPAFAQNNGEGSEVA 567

Query: 1176 GPATLTSTTSTDI--SKEPGFD 1235
                L S   TDI  S+  G D
Sbjct: 568  ESGVLKSAGGTDIIPSRATGCD 589


>gb|AEX32796.1| phytochrome-interacting factor 3 [Malus domestica]
          Length = 713

 Score =  283 bits (724), Expect = 1e-73
 Identities = 171/356 (48%), Positives = 209/356 (58%), Gaps = 18/356 (5%)
 Frame = +3

Query: 147  KDSCPPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXXXXDR 326
            ++ C  +++E   QE + K+D +        + +  P GE+ VEP+            +R
Sbjct: 349  EEPCTAKQSEGTCQEETSKDDINSNHIPCESAVRVSPNGEKTVEPVVASSVCSGNSV-ER 407

Query: 327  VSCEQTHNSKRKFRDTEESECRSDDIETESVGVKKTTHARGSGSKRSRAAEVHNLSERRR 506
             S + T   KRKFR+T+ESEC SDD+E E +GVKK  HARG GSKRSRAAEVHNLSERRR
Sbjct: 408  GSDDPTQALKRKFRETDESECHSDDVEEEYMGVKKGDHARGMGSKRSRAAEVHNLSERRR 467

Query: 507  RDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQMMFPTG 686
            RDRINEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQ+MSMGAG+ MP MM P G
Sbjct: 468  RDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSMGAGMYMPPMMLPPG 527

Query: 687  MQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS-------PIFPVPPLQAPHFPSSM 845
            MQHMH   + HFSP                             P+  VPP+Q  HFP S 
Sbjct: 528  MQHMHGPCMAHFSPMGVGMGMGMGLGMGFGMGMPDMNGASSSYPMLQVPPMQGAHFPGSH 587

Query: 846  ---PTNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIM 1016
                T F  M G NL ++G P QG+P  + R P  P +  P V S+ G  NA  S  P+ 
Sbjct: 588  MAGHTAFNGMMGSNLQMFGLPSQGVPVPMQRAPLAPSSAGPFVKSSAGL-NAGSSGGPVE 646

Query: 1017 N--------SGDPLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQ 1160
            N        S D + + +SQ   N+ A SS+NQ ++Q QATNE   QSA  + N Q
Sbjct: 647  NVESAPVSGSKDSVQNMNSQAMQNSNANSSMNQTSSQGQATNEGFGQSALVRNNVQ 702


>ref|XP_006382253.1| Phytochrome-interacting factor 3 family protein [Populus trichocarpa]
            gi|550337605|gb|ERP60050.1| Phytochrome-interacting
            factor 3 family protein [Populus trichocarpa]
          Length = 742

 Score =  280 bits (715), Expect = 1e-72
 Identities = 172/374 (45%), Positives = 207/374 (55%), Gaps = 23/374 (6%)
 Frame = +3

Query: 159  PPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXXXXDRVSCE 338
            P E  E    E   K+D++   +    + KGV   E+  EP+            +R S +
Sbjct: 362  PAELPEATIPEGDSKSDRNCRQNFCESAIKGVADVEKTKEPVVASSSVGSDNSVERASDD 421

Query: 339  QTHNSKRKFRDTEESECRSDDIETESVGVKKTTHAR-GSGSKRSRAAEVHNLSERRRRDR 515
             T N KRK RDTEESE  S+D+E ESVG KK   AR G+GSKR+RAAEVHNLSERRRRDR
Sbjct: 422  PTENLKRKHRDTEESEGPSEDVEEESVGAKKQAPARAGNGSKRNRAAEVHNLSERRRRDR 481

Query: 516  INEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQMMFPTGMQH 695
            INEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMGAGL MP MM P GM H
Sbjct: 482  INEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPSMMLPPGMPH 541

Query: 696  MHPAHIPHFSP-------XXXXXXXXXXXXXXXXXXXXXSPIFPVPPLQAPHF---PSSM 845
            MH AH+  F P                             P++ VPP+  PHF   P S 
Sbjct: 542  MHAAHMGQFLPMGVGMGMRMGMGMGFGMSMPDVNGGSSGCPMYQVPPMHGPHFSGQPMSG 601

Query: 846  PTNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMNSG 1025
             +   RM G NL ++G  GQG P S P  P VP++G PP+ +     N  P+   ++ + 
Sbjct: 602  LSALHRMGGSNLQMFGLSGQGFPMSFPCAPLVPMSGGPPLKT-----NMEPNACGVVGAT 656

Query: 1026 DPLTSG------------SSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQPAG 1169
            D L S             +SQ+  N    SS+NQ ++Q QATNE   Q A  Q N Q +G
Sbjct: 657  DNLDSATACSSHEAIQKINSQVMQNNVVNSSMNQTSSQCQATNECFEQPALVQNNAQDSG 716

Query: 1170 ASGPATLTSTTSTD 1211
             +    L S    D
Sbjct: 717  VADNRALKSVGGND 730


>ref|XP_002330047.1| predicted protein [Populus trichocarpa]
          Length = 733

 Score =  280 bits (715), Expect = 1e-72
 Identities = 172/374 (45%), Positives = 207/374 (55%), Gaps = 23/374 (6%)
 Frame = +3

Query: 159  PPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXXXXDRVSCE 338
            P E  E    E   K+D++   +    + KGV   E+  EP+            +R S +
Sbjct: 353  PAELPEATIPEGDSKSDRNCRQNFCESAIKGVADVEKTKEPVVASSSVGSDNSVERASDD 412

Query: 339  QTHNSKRKFRDTEESECRSDDIETESVGVKKTTHAR-GSGSKRSRAAEVHNLSERRRRDR 515
             T N KRK RDTEESE  S+D+E ESVG KK   AR G+GSKR+RAAEVHNLSERRRRDR
Sbjct: 413  PTENLKRKHRDTEESEGPSEDVEEESVGAKKQAPARAGNGSKRNRAAEVHNLSERRRRDR 472

Query: 516  INEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQMMFPTGMQH 695
            INEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMGAGL MP MM P GM H
Sbjct: 473  INEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPSMMLPPGMPH 532

Query: 696  MHPAHIPHFSP-------XXXXXXXXXXXXXXXXXXXXXSPIFPVPPLQAPHF---PSSM 845
            MH AH+  F P                             P++ VPP+  PHF   P S 
Sbjct: 533  MHAAHMGQFLPMGVGMGMRMGMGMGFGMSMPDVNGGSSGCPMYQVPPMHGPHFSGQPMSG 592

Query: 846  PTNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMNSG 1025
             +   RM G NL ++G  GQG P S P  P VP++G PP+ +     N  P+   ++ + 
Sbjct: 593  LSALHRMGGSNLQMFGLSGQGFPMSFPCAPLVPMSGGPPLKT-----NMEPNACGVVGAT 647

Query: 1026 DPLTSG------------SSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQPAG 1169
            D L S             +SQ+  N    SS+NQ ++Q QATNE   Q A  Q N Q +G
Sbjct: 648  DNLDSATACSSHEAIQKINSQVMQNNVVNSSMNQTSSQCQATNECFEQPALVQNNAQDSG 707

Query: 1170 ASGPATLTSTTSTD 1211
             +    L S    D
Sbjct: 708  VADNRALKSVGGND 721


>ref|XP_006423961.1| hypothetical protein CICLE_v10027890mg [Citrus clementina]
            gi|567862616|ref|XP_006423962.1| hypothetical protein
            CICLE_v10027890mg [Citrus clementina]
            gi|568853382|ref|XP_006480339.1| PREDICTED: transcription
            factor PIF3-like [Citrus sinensis]
            gi|557525895|gb|ESR37201.1| hypothetical protein
            CICLE_v10027890mg [Citrus clementina]
            gi|557525896|gb|ESR37202.1| hypothetical protein
            CICLE_v10027890mg [Citrus clementina]
          Length = 735

 Score =  279 bits (713), Expect = 2e-72
 Identities = 175/389 (44%), Positives = 220/389 (56%), Gaps = 17/389 (4%)
 Frame = +3

Query: 117  NSRQPVVNAHKDSCPPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXX 296
            +S QPV    + +C         +E ++ NDK     +   +TKGV   E+ VEP+    
Sbjct: 354  SSEQPVSEPPEAAC---------REDALNNDKKPSQVHAESATKGVVESEKTVEPVVAAS 404

Query: 297  XXXXXXXXDRVSCEQTHNSKRKFRDTEESECRSD--DIETESVGVKKTTHAR-GSGSKRS 467
                    +R S +  HN KRK  D ++SEC S+  D+E ESVGVKK    R G+GSKRS
Sbjct: 405  SVCSGNSVERASDDLPHNVKRKHCDLDDSECPSEEQDVEEESVGVKKQVPGRVGTGSKRS 464

Query: 468  RAAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMG 647
            RAAEVHNLSERRRRDRINEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMG
Sbjct: 465  RAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMG 524

Query: 648  AGLCMPQMMFPTGMQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXSPIFP---VPPL 818
            AG  MP MM+P+GMQHMH AH+ HF P                     S  +P   VP +
Sbjct: 525  AGFYMPPMMYPSGMQHMHAAHMAHFPPMGIGMGMGIGYGMGMPDINGGSSCYPMVQVPAM 584

Query: 819  QAPHFPS---SMPTNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSH- 986
               HFP    S P+  Q M G N  + G P QG   S+P  P  PL+G P + SAMG + 
Sbjct: 585  HGAHFPGTSVSGPSALQGMAGSNFQLLGLPAQGHHMSMPHAPLNPLSGGPIMKSAMGLNP 644

Query: 987  ----NAVPSTSPI--MNSGDPLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQ 1148
                 ++ +T       S D + + +SQ+K N  A   ++Q + Q +ATNE   + AA Q
Sbjct: 645  TGMVGSMDNTDAAKGSTSKDLVQNVNSQVKQNTGAKGPVDQASGQCEATNESSAEPAAVQ 704

Query: 1149 ENKQPAGASGPATLTSTTSTD-ISKEPGF 1232
            +N Q +  +G  T  S+   +  S  P F
Sbjct: 705  DNCQASEVNGLVTYNSSRKNENESSNPAF 733


>ref|XP_004302325.1| PREDICTED: transcription factor PIF3-like [Fragaria vesca subsp.
            vesca]
          Length = 710

 Score =  275 bits (702), Expect = 5e-71
 Identities = 164/316 (51%), Positives = 192/316 (60%), Gaps = 19/316 (6%)
 Frame = +3

Query: 321  DRVSCEQTHNSKRKFRDTEESECRSDDIETESVGVKK-TTHARGSGSKRSRAAEVHNLSE 497
            ++ S + T   KRK RDT++SEC S+D+E ESVGVKK   H RG+GSKRSRAAEVHNLSE
Sbjct: 388  EKASDDPTRVLKRKSRDTDDSECHSEDVEEESVGVKKKVAHGRGTGSKRSRAAEVHNLSE 447

Query: 498  RRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQMMF 677
            RRRRDRINEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMGAGL MPQMM 
Sbjct: 448  RRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPQMML 507

Query: 678  PTGMQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS-------PIFPVPPLQAPHFP 836
            P GMQHMH  H+ HFS                              P+  VPP+Q  HFP
Sbjct: 508  PPGMQHMHAPHMAHFSHMGMGMGMGMGLGMGFGMGLPDMNGGSSGYPMLQVPPMQGAHFP 567

Query: 837  SSMP---TNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTS 1007
             S     T F  M G NL ++G PGQG+   + R P VP++G   + SA+G  NA  +  
Sbjct: 568  GSPMSGHTAFNGMIGSNLQMFGLPGQGVSMPMQRPPLVPISGGSFMKSAIGP-NACGAGG 626

Query: 1008 PIMN--------SGDPLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQP 1163
            P+ N        S D + + +SQ+  N    SS+NQ +N  QATNE   QSA  Q+N Q 
Sbjct: 627  PVENMEPAPGTSSKDSVQNMNSQIMQNINTSSSMNQTSN--QATNEGFGQSALVQKNVQA 684

Query: 1164 AGASGPATLTSTTSTD 1211
               S      ST   D
Sbjct: 685  LDVSTSRANRSTNGKD 700