BLASTX nr result
ID: Rehmannia26_contig00014344
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00014344
(1910 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera] 647 0.0
ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g... 645 0.0
ref|XP_006358053.1| PREDICTED: KH domain-containing protein At4g... 626 e-177
ref|XP_004234567.1| PREDICTED: KH domain-containing protein At4g... 617 e-174
ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus ... 604 e-170
ref|XP_006482257.1| PREDICTED: KH domain-containing protein At4g... 589 e-165
ref|XP_006430781.1| hypothetical protein CICLE_v10011187mg [Citr... 589 e-165
gb|EMJ18848.1| hypothetical protein PRUPE_ppa027198mg, partial [... 583 e-164
ref|XP_002329331.1| predicted protein [Populus trichocarpa] gi|5... 583 e-163
ref|XP_006430782.1| hypothetical protein CICLE_v10011187mg [Citr... 576 e-161
gb|EOY04206.1| RNA-binding KH domain-containing protein isoform ... 575 e-161
gb|EOY04205.1| RNA-binding KH domain-containing protein isoform ... 575 e-161
gb|EOY04203.1| RNA-binding KH domain-containing protein isoform ... 575 e-161
gb|EOY04202.1| RNA-binding KH domain-containing protein isoform ... 575 e-161
ref|XP_004304132.1| PREDICTED: KH domain-containing protein At4g... 575 e-161
gb|AEV43362.1| poly C-binding protein [Citrus sinensis] 489 e-135
gb|EOY04207.1| RNA-binding KH domain-containing protein isoform ... 381 e-103
ref|XP_006661902.1| PREDICTED: KH domain-containing protein At4g... 375 e-101
gb|AAP54423.2| KH domain containing protein, expressed [Oryza sa... 360 2e-96
ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group] g... 360 2e-96
>emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
Length = 668
Score = 647 bits (1668), Expect = 0.0
Identities = 350/568 (61%), Positives = 418/568 (73%), Gaps = 5/568 (0%)
Frame = -1
Query: 1721 SARFYQLMEGNRRNFLNKRSNPHFKKSGSPRKGKQHNTVHGESSENFRLSDTVYYILCQS 1542
S F+ MEG RR KR N FK+ GS ++G+ +N+ H +S N +++DTVY ILC S
Sbjct: 22 SPLFWGSMEGXRRGSFKKRPNFQFKRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPS 81
Query: 1541 TXXXXXXXXXXXXXKALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKA 1362
KALREETQAKITV+DSVPGSDERVIII+S K K H+ + +
Sbjct: 82 KKIGGVIGKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHNSNEDPER 141
Query: 1361 EKEYDALKPHCAAQDALLKVHNRIVEEDL-GGTKKGNDDE-TVASARLLVSNNMVGCLLG 1188
E+E D ++PHC AQDAL+KVH RI+EEDL GGT+ +D+E TV +ARLLV NNMVGCLLG
Sbjct: 142 EEEQDHMEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLVPNNMVGCLLG 201
Query: 1187 RKGDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNP 1008
++GDVIQRLRSETGANIRVLP++HLP CA +D LVQISGKPA+ +KALYEVSTLLH+NP
Sbjct: 202 KRGDVIQRLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNP 261
Query: 1007 RKDKPPSSFSSPYASHPPPYDGQGFHLSGPRTRNMLSPEYPTWLERNTDTHRMQPLPYKG 828
RKDKPPSSF P + GQGFH G NM P P W RN+++ + P+P+ G
Sbjct: 262 RKDKPPSSF-------PMSFGGQGFHPPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMG 314
Query: 827 GYGIRPSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGA 648
GY +PS P FDGV H EA EF++KI+C A KIGGVIGKGG NVKQL+QETGA
Sbjct: 315 GYRSQPSVV-PGGFDGVHAGHGGEASGEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGA 373
Query: 647 SIHVDNVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSS 468
SIHV++ ES+ERVI VSSFEALW+PRSQTI+AIL LQNKTSEYS++G +TTRLLVPSS
Sbjct: 374 SIHVEDALAESEERVIRVSSFEALWNPRSQTIEAILQLQNKTSEYSDKGGMTTRLLVPSS 433
Query: 467 KVGCILGQGGHVINDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEI 288
KVGCILGQGGHVIN+MRRRT ADIRV+SK E+KPKCAS DEELVQISG+FG+A+DAL EI
Sbjct: 434 KVGCILGQGGHVINEMRRRTQADIRVYSK-EDKPKCASDDEELVQISGNFGVAKDALAEI 492
Query: 287 ASRLRTRCLRDENTRGEPASVRPLPGFGPAGNLRGGGLPVSSNIV-PGSLGRYEHLQDSV 111
ASRLR RCLRD N EPA V P+PGFG G L GGLP SS + GS G +E +
Sbjct: 493 ASRLRVRCLRDANGGVEPAPVGPVPGFGHPGKL-PGGLPSSSGALGAGSSGGFELSKGGG 551
Query: 110 REYDPPSF--PPRATGYLDVNEAKYSSV 33
EY+P S+ PP ATGY +VN + S +
Sbjct: 552 LEYEPQSYPVPPAATGYHNVNSSMESKI 579
Score = 83.2 bits (204), Expect = 4e-13
Identities = 91/339 (26%), Positives = 141/339 (41%), Gaps = 5/339 (1%)
Frame = -1
Query: 1601 GESSENFRLSDTVYYILCQSTXXXXXXXXXXXXXKALREETQAKITVSDSVPGSDERVII 1422
GE+S F + ILC + K L++ET A I V D++ S+ERVI
Sbjct: 336 GEASGEFSMK-----ILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEERVIR 390
Query: 1421 IFSPSDKQAKRHSGDNGDKAEKEYDAL-KPHCAAQDALLKVHNRIVE-EDLGGTKKGNDD 1248
+ S ++AL P +A+L++ N+ E D GG
Sbjct: 391 VSS--------------------FEALWNPRSQTIEAILQLQNKTSEYSDKGGM------ 424
Query: 1247 ETVASARLLVSNNMVGCLLGRKGDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISG 1068
+ RLLV ++ VGC+LG+ G VI +R T A+IRV + P CA ++ LVQISG
Sbjct: 425 ----TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKEDKPKCASDDEELVQISG 480
Query: 1067 KPAIVRKALYEVSTLLHRNPRKDKPPSSFSSPYASHPPPYDGQGFHLSG--PRTRNMLSP 894
+ + AL E+++ L +D +P P P G L G P + L
Sbjct: 481 NFGVAKDALAEIASRLRVRCLRDANGGVEPAPVG--PVPGFGHPGKLPGGLPSSSGALGA 538
Query: 893 EYPTWLERNTDTHRMQPLPYKG-GYGIRPSAFGPDDFDGVTPPHDREAPSEFTLKIICSA 717
E + + L Y+ Y + P+A G + V + + P+
Sbjct: 539 GSSGGFELS----KGGGLEYEPQSYPVPPAATG---YHNVNSSMESKIPNN--------- 582
Query: 716 EKIGGVIGKGGSNVKQLEQETGASIHVDNVSKESDERVI 600
+ VIG GG NV + + GA + + + E V+
Sbjct: 583 -SVSSVIGMGGGNVANMSEMAGARVKLQDPQSGGSECVV 620
>ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera] gi|296087281|emb|CBI33655.3| unnamed protein
product [Vitis vinifera]
Length = 676
Score = 645 bits (1663), Expect = 0.0
Identities = 348/561 (62%), Positives = 414/561 (73%), Gaps = 5/561 (0%)
Frame = -1
Query: 1700 MEGNRRNFLNKRSNPHFKKSGSPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXXXX 1521
MEG RR KR N FK+ GS ++G+ +N+ H +S N +++DTVY ILC S
Sbjct: 1 MEGTRRGSFKKRPNFQFKRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGGVI 60
Query: 1520 XXXXXXXKALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYDAL 1341
KALREETQAKITV+DSVPGSDERVIII+S K K H + + E+E D +
Sbjct: 61 GKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHDSNEDPEMEEEQDHM 120
Query: 1340 KPHCAAQDALLKVHNRIVEEDL-GGTKKGNDDE-TVASARLLVSNNMVGCLLGRKGDVIQ 1167
+PHC AQDAL+KVH RI+EEDL GGT+ +D+E TV +ARLLV NNMVGCLLG++GDVIQ
Sbjct: 121 EPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDVIQ 180
Query: 1166 RLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKPPS 987
RLRSETGANIRVLP++HLP CA +D LVQISGKPA+ +KALYEVSTLLH+NPRKDKPPS
Sbjct: 181 RLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKDKPPS 240
Query: 986 SFSSPYASHPPPYDGQGFHLSGPRTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGIRPS 807
SF P + GQGFH G NM P P W RN+++ + P+P+ GGY +PS
Sbjct: 241 SF-------PMSFGGQGFHPPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMGGYRSQPS 293
Query: 806 AFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHVDNV 627
P FDGV H EA EF++KI+C A KIGGVIGKGG NVKQL+QETGASIHV++
Sbjct: 294 VV-PGGFDGVHAGHGGEASGEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDA 352
Query: 626 SKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGCILG 447
ES+ERVI VSSFEALW+PRSQTI+AIL LQNKTSEYS++G +TTRLLVPSSKVGCILG
Sbjct: 353 LAESEERVIRVSSFEALWNPRSQTIEAILQLQNKTSEYSDKGGMTTRLLVPSSKVGCILG 412
Query: 446 QGGHVINDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTR 267
QGGHVIN+MRRRT ADIRV+SK E+KPKCAS DEELVQISG+FG+A+DAL EIASRLR R
Sbjct: 413 QGGHVINEMRRRTQADIRVYSK-EDKPKCASDDEELVQISGNFGVAKDALAEIASRLRVR 471
Query: 266 CLRDENTRGEPASVRPLPGFGPAGNLRGGGLPVSSNIV-PGSLGRYEHLQDSVREYDPPS 90
CLRD N EPA V P+PGFG G L GGLP SS + GS G +E + EY+P S
Sbjct: 472 CLRDANGGVEPAPVGPVPGFGHPGKL-PGGLPSSSGALGAGSSGGFELSKGGGLEYEPQS 530
Query: 89 F--PPRATGYLDVNEAKYSSV 33
+ PP ATGY +VN + S +
Sbjct: 531 YPVPPAATGYHNVNSSMESKI 551
Score = 83.2 bits (204), Expect = 4e-13
Identities = 91/339 (26%), Positives = 141/339 (41%), Gaps = 5/339 (1%)
Frame = -1
Query: 1601 GESSENFRLSDTVYYILCQSTXXXXXXXXXXXXXKALREETQAKITVSDSVPGSDERVII 1422
GE+S F + ILC + K L++ET A I V D++ S+ERVI
Sbjct: 308 GEASGEFSMK-----ILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEERVIR 362
Query: 1421 IFSPSDKQAKRHSGDNGDKAEKEYDAL-KPHCAAQDALLKVHNRIVE-EDLGGTKKGNDD 1248
+ S ++AL P +A+L++ N+ E D GG
Sbjct: 363 VSS--------------------FEALWNPRSQTIEAILQLQNKTSEYSDKGGM------ 396
Query: 1247 ETVASARLLVSNNMVGCLLGRKGDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISG 1068
+ RLLV ++ VGC+LG+ G VI +R T A+IRV + P CA ++ LVQISG
Sbjct: 397 ----TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKEDKPKCASDDEELVQISG 452
Query: 1067 KPAIVRKALYEVSTLLHRNPRKDKPPSSFSSPYASHPPPYDGQGFHLSG--PRTRNMLSP 894
+ + AL E+++ L +D +P P P G L G P + L
Sbjct: 453 NFGVAKDALAEIASRLRVRCLRDANGGVEPAPVG--PVPGFGHPGKLPGGLPSSSGALGA 510
Query: 893 EYPTWLERNTDTHRMQPLPYKG-GYGIRPSAFGPDDFDGVTPPHDREAPSEFTLKIICSA 717
E + + L Y+ Y + P+A G + V + + P+
Sbjct: 511 GSSGGFELS----KGGGLEYEPQSYPVPPAATG---YHNVNSSMESKIPNN--------- 554
Query: 716 EKIGGVIGKGGSNVKQLEQETGASIHVDNVSKESDERVI 600
+ VIG GG NV + + GA + + + E V+
Sbjct: 555 -SVSSVIGMGGGNVANMSEMAGARVKLQDPQSGGSECVV 592
>ref|XP_006358053.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
[Solanum tuberosum] gi|565383832|ref|XP_006358054.1|
PREDICTED: KH domain-containing protein At4g18375-like
isoform X2 [Solanum tuberosum]
Length = 705
Score = 626 bits (1615), Expect = e-177
Identities = 338/579 (58%), Positives = 410/579 (70%), Gaps = 13/579 (2%)
Frame = -1
Query: 1700 MEGNRRNFLNKRSNPHFKKSGSPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXXXX 1521
M+ +RN L +RSNP FK+ G + K + + H SSEN + SDT Y ILCQS
Sbjct: 1 MDEYKRNSLKQRSNPQFKRKGGSKNAKLNFSSHERSSENSQSSDTTYCILCQSKKVGSVI 60
Query: 1520 XXXXXXXKALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGD-NGDKAE--KEY 1350
KALREETQAKITV+DSVPGSD+R++I+ SPS K A+R + D N D E +E
Sbjct: 61 GKGGSIIKALREETQAKITVADSVPGSDDRIVIVSSPSTKLARRQNNDKNNDNPETKEEN 120
Query: 1349 DALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDETVASARLLVSNNMVGCLLGRKGDVI 1170
+++PHCAAQDALLKVHNRIVEEDL G + + ETV RLLV NN+VGCLLGRKGDVI
Sbjct: 121 CSMEPHCAAQDALLKVHNRIVEEDLQGVQNEDKSETVIITRLLVPNNLVGCLLGRKGDVI 180
Query: 1169 QRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKPP 990
Q+LRSETGA+IRVL ++HLP CA D LVQISGKPA+V+KALYEVSTLLH+NPRKDKP
Sbjct: 181 QKLRSETGASIRVLSAEHLPACAMTTDELVQISGKPALVKKALYEVSTLLHQNPRKDKPI 240
Query: 989 SSFSSPYASHPPPYDGQGFHLSGPRTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGIRP 810
SSF P + QGFH GP NM+ P P W + T+ + M P GGY +
Sbjct: 241 SSF-------PMVHGAQGFHPPGPPMENMIPPGKPMWSQSKTNLNGMSPALGVGGYRNQL 293
Query: 809 SAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHVDN 630
+ FG DFD PP EAP +FT+KI+CSA KIGGVIGKGG NVKQL+Q+TGA IHV++
Sbjct: 294 TGFGRADFDYGPPPSAGEAPGDFTMKILCSAAKIGGVIGKGGFNVKQLQQDTGAGIHVED 353
Query: 629 VSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGCIL 450
V+ ESDERVI VSS E+ WDPRS+TIDAIL LQ+KTSE+S++G +TTRLL PS+KVGCI+
Sbjct: 354 VAPESDERVIRVSSLESFWDPRSRTIDAILQLQSKTSEFSDKGIVTTRLLFPSNKVGCII 413
Query: 449 GQGGHVINDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRT 270
GQGG VIN+MRRRT ADIRV SK ++KP+CAS DEELVQISGS G+A+DALVEI+SRLR
Sbjct: 414 GQGGQVINEMRRRTQADIRVLSK-DDKPRCASADEELVQISGSIGVAKDALVEISSRLRE 472
Query: 269 RCLRDENTRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQDSVREYDPPS 90
RCLRD N++ E VRPLPGF P+ + R G S + GS RYEHL+ +VREYD PS
Sbjct: 473 RCLRDANSKVESTPVRPLPGFVPSEDFRSGDPQRSGAMGAGSSRRYEHLKGAVREYDHPS 532
Query: 89 FP--PRATGYLDVN--------EAKYSSVSAAAGSRIAE 3
+P P AT + ++ + Y S G I E
Sbjct: 533 YPDLPIATRFSNIRSPPEMKFPDHSYGSAKGTGGYNIDE 571
>ref|XP_004234567.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
lycopersicum]
Length = 707
Score = 617 bits (1591), Expect = e-174
Identities = 333/550 (60%), Positives = 399/550 (72%), Gaps = 5/550 (0%)
Frame = -1
Query: 1700 MEGNRRNFLNKRSNPHFKKSGSPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXXXX 1521
M+ +RN L +RSNP FK+ G + K + + H SSEN + SDT Y ILCQS
Sbjct: 1 MDEYKRNSLKQRSNPQFKRKGGSKNAKLNFSSHERSSENSQSSDTTYCILCQSKKVGSVI 60
Query: 1520 XXXXXXXKALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGD-NGDKAE--KEY 1350
KALREETQAKITV+DSVPGSD+R++II SPS K A+R + D N D E +E
Sbjct: 61 GKGGSIIKALREETQAKITVADSVPGSDDRIVIISSPSTKLARRQNNDKNNDNPETKEEN 120
Query: 1349 DALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDETVASARLLVSNNMVGCLLGRKGDVI 1170
+++PHCAAQDALLKVHNRIVEEDL G + + E V RLLV NN+VGCLLGRKGDVI
Sbjct: 121 YSMEPHCAAQDALLKVHNRIVEEDLLGVQNEDKSEAVIITRLLVPNNLVGCLLGRKGDVI 180
Query: 1169 QRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKPP 990
Q+LRSETGA+IRVL ++HLP CA D LVQISGKPA+V+KALYEVSTLLH+NPRKDKP
Sbjct: 181 QKLRSETGASIRVLSAEHLPACAMTTDELVQISGKPALVKKALYEVSTLLHQNPRKDKPI 240
Query: 989 SSFSSPYASHPPPYDGQGFHLSGPRTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGIRP 810
SSF P + QGFH GP NM+ P P W + T+ + M P GGY +
Sbjct: 241 SSF-------PMVHGAQGFHPPGPPMENMIPPGKPMWSQSKTNLNGMPPALGVGGYRNQL 293
Query: 809 SAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHVDN 630
+ FG DFD PP EAP +FT+KI+CSA KIGGVIGKGG NVKQL+QETGA IHV++
Sbjct: 294 TGFGRADFDYGPPPSAGEAPGDFTMKILCSAAKIGGVIGKGGFNVKQLQQETGAGIHVED 353
Query: 629 VSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGCIL 450
V+ ESDERVI VSS E+ WDPRS+TIDAIL LQ+KTSE+S++G +TTRLL PS+KVGCI+
Sbjct: 354 VAPESDERVIRVSSLESFWDPRSRTIDAILQLQSKTSEFSDKGIVTTRLLFPSNKVGCII 413
Query: 449 GQGGHVINDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRT 270
GQGG VIN+MRRRT ADIRV SK +EKP+CAS DEELVQISGS G+A+DALVEI+SRLR
Sbjct: 414 GQGGQVINEMRRRTQADIRVLSK-DEKPRCASADEELVQISGSIGVAKDALVEISSRLRE 472
Query: 269 RCLRDENTRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQDSVREYDPPS 90
RCLRD N++ E VRPLPGF P+ + R S + GS RYEHL+ +VRE D PS
Sbjct: 473 RCLRDANSKVESTHVRPLPGFVPSEDFRSRDPQRSGVMGAGSSRRYEHLKGAVRECDHPS 532
Query: 89 FP--PRATGY 66
+P P AT +
Sbjct: 533 YPDLPIATRF 542
>ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein,
putative [Ricinus communis]
Length = 537
Score = 604 bits (1557), Expect = e-170
Identities = 331/549 (60%), Positives = 387/549 (70%), Gaps = 4/549 (0%)
Frame = -1
Query: 1700 MEGNRRNFLNKRSNPHFKKSGSPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXXXX 1521
M+GN+RN K N FK+ G RKGK +N+ ESS N DTVY ILC S
Sbjct: 1 MDGNKRNVFKKYQNNQFKRKGVTRKGKWNNSGREESSGNPLPVDTVYRILCPSRKIGGVI 60
Query: 1520 XXXXXXXKALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYDAL 1341
K LREETQAKITV+D VPGSDERVIII+S +K ++ H+ E E D +
Sbjct: 61 GKGGGIIKGLREETQAKITVADPVPGSDERVIIIYSSPEKISRNHNDHEDLTMENEQDIM 120
Query: 1340 KPHCAAQDALLKVHNRIVEEDLGGTKKGNDDET--VASARLLVSNNMVGCLLGRKGDVIQ 1167
+P+CAAQDALLKVH+RIVEEDL G +DD +ARLLV NNMVGCLLG++GDVIQ
Sbjct: 121 EPYCAAQDALLKVHDRIVEEDLFGGMTSDDDNENGFVTARLLVPNNMVGCLLGKRGDVIQ 180
Query: 1166 RLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKPPS 987
RLRSETGANIRVLP+DHLP CA D LVQIS KP + +KALYEVSTLLH+NPRKDKPPS
Sbjct: 181 RLRSETGANIRVLPADHLPTCAMSTDELVQISAKPDVAKKALYEVSTLLHQNPRKDKPPS 240
Query: 986 SFSSPYASHPPPYDGQGFHLSGPRTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGIRPS 807
P PY GQ FH G +N+ P W N+ +H + P+P G YG + S
Sbjct: 241 V--------PMPYSGQSFHPPGGPMKNLPPLGSPMWPHHNS-SHSIPPMPIMGRYGSQSS 291
Query: 806 AFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHVDNV 627
FGP FD V H E +EF++KI+CSA KIGGVIGKGGSNVK ++Q+TGASIHV++
Sbjct: 292 GFGPGGFDDVPRGHVAEPSAEFSMKILCSAGKIGGVIGKGGSNVKVVQQDTGASIHVEDA 351
Query: 626 SKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGCILG 447
S ESDERVI VS+ EALW+PRSQTIDAIL LQNKTS++SE+GTITTRLLVPSSKVGCILG
Sbjct: 352 SAESDERVIRVSASEALWNPRSQTIDAILQLQNKTSDFSEKGTITTRLLVPSSKVGCILG 411
Query: 446 QGGHVINDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTR 267
QGG VIN+MRRRT ADIRV+SK +EKPKCAS DEELVQISG FG+A+DAL EIASRLR R
Sbjct: 412 QGGQVINEMRRRTQADIRVYSK-DEKPKCASEDEELVQISGKFGVAKDALAEIASRLRVR 470
Query: 266 CLRDENTRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQDSVREYDPPSF 87
LRD N EP V P+ GFG A +L G G S + S G YE L+D+ EY+ S+
Sbjct: 471 TLRDVNAGAEPGPVGPIQGFGAARSLPGRG--SSGMMGASSSGGYEPLRDTEHEYESHSY 528
Query: 86 --PPRATGY 66
PP A GY
Sbjct: 529 PVPPAAVGY 537
>ref|XP_006482257.1| PREDICTED: KH domain-containing protein At4g18375 [Citrus sinensis]
Length = 715
Score = 589 bits (1519), Expect = e-165
Identities = 322/562 (57%), Positives = 390/562 (69%), Gaps = 11/562 (1%)
Frame = -1
Query: 1700 MEGNRRNFLNKRSNPHFKKSG--SPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXX 1527
M+ ++RNF KR N FK+ G +KG N+ +S N + +DTVY ILC S
Sbjct: 1 MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60
Query: 1526 XXXXXXXXXKALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYD 1347
K+LREETQAKITV+D++PGS+ERVIII+S K AK+ + D+ AE + +
Sbjct: 61 VIGKGGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKKVNKDDDSAAETKKE 120
Query: 1346 ALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDE--TVASARLLVSNNMVGCLLGRKGDV 1173
+++PHCAAQDALLKVH+RI+EEDL G +DD + +ARLLV NNMVGCLLG++GDV
Sbjct: 121 SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTVTARLLVPNNMVGCLLGKRGDV 180
Query: 1172 IQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKP 993
IQRLRSETGANIRVLP+D LP CA D LVQISGKP + ++ALYEVSTLLH+NPRKDKP
Sbjct: 181 IQRLRSETGANIRVLPADRLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRKDKP 240
Query: 992 PSSFSSPYASHPPPYDGQGFHLSGPRTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGIR 813
PSSF P Y GQ FH +M +W RN+ H M P+ GGYG +
Sbjct: 241 PSSF-------PQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQ 293
Query: 812 PSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHVD 633
PS G + P E +EF++KI+CSA KIGGVIGKGG NVKQL+QETGASIHV+
Sbjct: 294 PSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE 353
Query: 632 NVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGCI 453
+ +SDERVI S+FE LW+PRSQTIDAIL LQNKTSE+SE+GTITTRLLVPSSKVGCI
Sbjct: 354 DAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCI 413
Query: 452 LGQGGHVINDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLR 273
LGQGGHVIN+MRRRT ADIRV+SK ++KPKCAS DEELVQISG+FG+A+DAL EIASRLR
Sbjct: 414 LGQGGHVINEMRRRTQADIRVYSK-DDKPKCASEDEELVQISGNFGVAKDALTEIASRLR 472
Query: 272 TRCLRDENTRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQDSVREYDPP 93
R LRD N EPA V P+ G AG L G S + G G YE + +Y+P
Sbjct: 473 ARTLRDANVGAEPAPVGPVQLVGAAGGLPSRGPLPSGPVGAGISGGYEPFRGGY-DYEPQ 531
Query: 92 SF-------PPRATGYLDVNEA 48
S+ PP ATGY ++N A
Sbjct: 532 SYPPPPSAPPPSATGYPNMNSA 553
>ref|XP_006430781.1| hypothetical protein CICLE_v10011187mg [Citrus clementina]
gi|557532838|gb|ESR44021.1| hypothetical protein
CICLE_v10011187mg [Citrus clementina]
Length = 710
Score = 589 bits (1518), Expect = e-165
Identities = 321/557 (57%), Positives = 388/557 (69%), Gaps = 6/557 (1%)
Frame = -1
Query: 1700 MEGNRRNFLNKRSNPHFKKSG--SPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXX 1527
M+ ++RNF KR N FK+ G +KG N+ +S N + +DTVY ILC S
Sbjct: 1 MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60
Query: 1526 XXXXXXXXXKALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYD 1347
K+LREETQAKITV+D++PGS+ERVIII+S K AK + D+ AE + +
Sbjct: 61 VIGKGGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE 120
Query: 1346 ALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDE--TVASARLLVSNNMVGCLLGRKGDV 1173
+++PHCAAQDALLKVH+RI+EEDL G +DD + +ARLLV NNMVGCLLG++GDV
Sbjct: 121 SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTVTARLLVPNNMVGCLLGKRGDV 180
Query: 1172 IQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKP 993
IQRLRSETGANIRVLP+D LP CA D LVQISGKP + ++ALYEVSTLLH+NPRKDKP
Sbjct: 181 IQRLRSETGANIRVLPADRLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRKDKP 240
Query: 992 PSSFSSPYASHPPPYDGQGFHLSGPRTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGIR 813
PSSF P Y GQ FH +M +W RN+ H M P+ GGYG +
Sbjct: 241 PSSF-------PQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQ 293
Query: 812 PSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHVD 633
PS G + P E +EF++KI+CSA KIGGVIGKGG NVKQL+QETGASIHV+
Sbjct: 294 PSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE 353
Query: 632 NVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGCI 453
+ +SDERVI S+FE LW+PRSQTIDAIL LQNKTSE+SE+GTITTRLLVPSSKVGCI
Sbjct: 354 DAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCI 413
Query: 452 LGQGGHVINDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLR 273
LGQGGHVIN+MRRRT ADIRV+SK ++KPKCAS DEELVQISG+FG+A+DAL EIASRLR
Sbjct: 414 LGQGGHVINEMRRRTQADIRVYSK-DDKPKCASEDEELVQISGNFGVAKDALTEIASRLR 472
Query: 272 TRCLRDENTRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQDSVREYDPP 93
R LRD N EPA V P+ G AG L G S + G G YE + +Y+P
Sbjct: 473 ARTLRDANVGAEPAPVGPVQLVGAAGGLPSRGPLPSGPVGAGISGGYEPFRGGY-DYEPQ 531
Query: 92 SF--PPRATGYLDVNEA 48
S+ PP A GY ++N A
Sbjct: 532 SYPPPPSAMGYPNMNSA 548
>gb|EMJ18848.1| hypothetical protein PRUPE_ppa027198mg, partial [Prunus persica]
Length = 576
Score = 583 bits (1504), Expect = e-164
Identities = 325/559 (58%), Positives = 387/559 (69%), Gaps = 8/559 (1%)
Frame = -1
Query: 1700 MEGNRRNFLNKRSNPHFKKSGSP---RKGKQHNTVHGESSENFRLSDTVYYILCQSTXXX 1530
M+GN+RNF KR N FK+ G +KG +N+ + EN++ DTVY ILC S
Sbjct: 1 MDGNKRNFFKKRPNVQFKRKGGNNNYKKGNWNNSTREQLLENYQSLDTVYRILCPSKRIG 60
Query: 1529 XXXXXXXXXXKALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEY 1350
KALREET+AKITV+DSV GSDERVIIIFS K + + + D E E
Sbjct: 61 GVIGKGGGIVKALREETRAKITVADSVLGSDERVIIIFSSPTKISSKQTNDGDSSEENEL 120
Query: 1349 DALKPHCAAQDALLKVHNRIVEEDL-GGTKKGNDDE-TVASARLLVSNNMVGCLLGRKGD 1176
+ + PHCAAQDALLKVHNRIVEEDL GG +D+E +V +ARLLV NNMVGCLLG+ GD
Sbjct: 121 EPMDPHCAAQDALLKVHNRIVEEDLFGGVTFDDDNENSVVTARLLVPNNMVGCLLGKGGD 180
Query: 1175 VIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDK 996
VIQRLRSET A+IRVLP+D LP CA D LVQISGKP + ++ALYEVSTLLH+NPRKDK
Sbjct: 181 VIQRLRSETSASIRVLPADQLPTCAMETDELVQISGKPDVTKRALYEVSTLLHQNPRKDK 240
Query: 995 PPSSFSSPYASHPPPYDGQGFHLSGPRTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGI 816
PPS F P P+ GQGF G N+L P P W R +H P+P GYG
Sbjct: 241 PPSGF-------PMPFWGQGFRPPGAPMTNVLPPGNPMWSNR-APSHSTAPMPRMEGYGN 292
Query: 815 RPSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHV 636
S F F+GV P H EA +EF++KI+CS KIGGVIGKGG NVKQL+ ETGASIHV
Sbjct: 293 CSSEFALGGFNGVPPGHGGEALAEFSMKILCSPGKIGGVIGKGGFNVKQLQLETGASIHV 352
Query: 635 DNVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGC 456
S +S+ERVI VS+FEA W+P SQTI+AIL LQNKTSE S++G ITTRLLVPSSKVGC
Sbjct: 353 QEASTDSEERVIHVSAFEAFWNPISQTIEAILELQNKTSELSDKGIITTRLLVPSSKVGC 412
Query: 455 ILGQGGHVINDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRL 276
ILGQGG VIN+MRRRT ADIRV+SK +++P+CA+ DEELVQISG+FG+A+DAL EI SRL
Sbjct: 413 ILGQGGQVINEMRRRTQADIRVYSK-DDRPRCAAEDEELVQISGNFGVAKDALAEITSRL 471
Query: 275 RTRCLRDENTRGEPASVRPLPGFGPAGNLRGGG-LPVSSNIVPGSLGRYEHLQDSVREYD 99
R R LRD N EPA V P GFG AG++ GGG S + GS RY+ L+ EY+
Sbjct: 472 RVRTLRDANAGAEPALVGPAHGFGLAGSVPGGGPRQPPSAVGAGSSSRYDPLKVGRHEYE 531
Query: 98 PPSF--PPRATGYLDVNEA 48
S+ P A+GY VN A
Sbjct: 532 LQSYRIPSTASGYPSVNHA 550
>ref|XP_002329331.1| predicted protein [Populus trichocarpa]
gi|566171617|ref|XP_006383459.1| hypothetical protein
POPTR_0005s15690g [Populus trichocarpa]
gi|550339070|gb|ERP61256.1| hypothetical protein
POPTR_0005s15690g [Populus trichocarpa]
Length = 563
Score = 583 bits (1502), Expect = e-163
Identities = 321/532 (60%), Positives = 375/532 (70%), Gaps = 5/532 (0%)
Frame = -1
Query: 1700 MEGNRRNFLNKRSNPHFKKSG--SPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXX 1527
M+GNRR + K N FK+ G S RKGK ++ HGE DTVY ILC S
Sbjct: 1 MDGNRRKYFKKPGNNLFKRKGVSSSRKGKWSDS-HGEECSGD--GDTVYRILCPSRKIGG 57
Query: 1526 XXXXXXXXXKALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEK-EY 1350
KALREETQ+KITV+DSV GSDERVIII+S SDK ++ GD G A +
Sbjct: 58 VIGKGGNIVKALREETQSKITVADSVQGSDERVIIIYSSSDKPPRKMDGDEGLPAGNGQQ 117
Query: 1349 DALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDE--TVASARLLVSNNMVGCLLGRKGD 1176
+A +PHCAAQDALLKVH+RIVEEDL G +DD V +ARLLV NNMVGC+LG++GD
Sbjct: 118 EAFEPHCAAQDALLKVHDRIVEEDLFGGMASDDDNDNNVVTARLLVPNNMVGCVLGKRGD 177
Query: 1175 VIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDK 996
VIQRLRSETGANIRVLP+DHLP CA D LVQISGKPA+ ++ALYE+S LLH+NPRKDK
Sbjct: 178 VIQRLRSETGANIRVLPADHLPSCAMDTDELVQISGKPAVAKRALYEISILLHQNPRKDK 237
Query: 995 PPSSFSSPYASHPPPYDGQGFHLSGPRTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGI 816
PS P PY G+ FH NML P P W RN+ H M P+ G YG
Sbjct: 238 LPSV--------PMPYGGRTFHPPSDSMANMLPPGNPMWPHRNSTPHSM---PWMGEYGN 286
Query: 815 RPSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHV 636
PS FGP F+GV P H RE +EF++KI+CS KIGGVIGKGGSNVK ++QETGASIHV
Sbjct: 287 HPSEFGPGGFNGVPPGHGREPSAEFSMKILCSTGKIGGVIGKGGSNVKIVQQETGASIHV 346
Query: 635 DNVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGC 456
++ S ES+ER I VS+FE LW+PRSQTIDAIL LQ+KTS++SE+G I TRLLVPSSKVGC
Sbjct: 347 EDASAESEERAIRVSAFEGLWNPRSQTIDAILQLQDKTSDFSEKGMIITRLLVPSSKVGC 406
Query: 455 ILGQGGHVINDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRL 276
ILGQGG VIN+MRRR ADIRV+ K +KPKCAS DEELVQISG++G+A+DAL EIASRL
Sbjct: 407 ILGQGGQVINEMRRRLQADIRVYPK-NDKPKCASDDEELVQISGNYGVAKDALAEIASRL 465
Query: 275 RTRCLRDENTRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQ 120
R R LRD N EP P+PGFGPA NL G G S + S G YE L+
Sbjct: 466 RARTLRDANAGTEPGPAGPVPGFGPARNLPGRGPQPSGMMAASSSGGYEPLR 517
>ref|XP_006430782.1| hypothetical protein CICLE_v10011187mg [Citrus clementina]
gi|557532839|gb|ESR44022.1| hypothetical protein
CICLE_v10011187mg [Citrus clementina]
Length = 528
Score = 576 bits (1485), Expect = e-161
Identities = 313/536 (58%), Positives = 375/536 (69%), Gaps = 4/536 (0%)
Frame = -1
Query: 1700 MEGNRRNFLNKRSNPHFKKSG--SPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXX 1527
M+ ++RNF KR N FK+ G +KG N+ +S N + +DTVY ILC S
Sbjct: 1 MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60
Query: 1526 XXXXXXXXXKALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYD 1347
K+LREETQAKITV+D++PGS+ERVIII+S K AK + D+ AE + +
Sbjct: 61 VIGKGGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE 120
Query: 1346 ALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDE--TVASARLLVSNNMVGCLLGRKGDV 1173
+++PHCAAQDALLKVH+RI+EEDL G +DD + +ARLLV NNMVGCLLG++GDV
Sbjct: 121 SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTVTARLLVPNNMVGCLLGKRGDV 180
Query: 1172 IQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKP 993
IQRLRSETGANIRVLP+D LP CA D LVQISGKP + ++ALYEVSTLLH+NPRKDKP
Sbjct: 181 IQRLRSETGANIRVLPADRLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRKDKP 240
Query: 992 PSSFSSPYASHPPPYDGQGFHLSGPRTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGIR 813
PSSF P Y GQ FH +M +W RN+ H M P+ GGYG +
Sbjct: 241 PSSF-------PQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQ 293
Query: 812 PSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHVD 633
PS G + P E +EF++KI+CSA KIGGVIGKGG NVKQL+QETGASIHV+
Sbjct: 294 PSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE 353
Query: 632 NVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGCI 453
+ +SDERVI S+FE LW+PRSQTIDAIL LQNKTSE+SE+GTITTRLLVPSSKVGCI
Sbjct: 354 DAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCI 413
Query: 452 LGQGGHVINDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLR 273
LGQGGHVIN+MRRRT ADIRV+SK ++KPKCAS DEELVQISG+FG+A+DAL EIASRLR
Sbjct: 414 LGQGGHVINEMRRRTQADIRVYSK-DDKPKCASEDEELVQISGNFGVAKDALTEIASRLR 472
Query: 272 TRCLRDENTRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQDSVRE 105
R LRD N EPA V P+ G AG L G S + G G YE + S E
Sbjct: 473 ARTLRDANVGAEPAPVGPVQLVGAAGGLPSRGPLPSGPVGAGISGGYEPFRVSQYE 528
>gb|EOY04206.1| RNA-binding KH domain-containing protein isoform 5 [Theobroma cacao]
Length = 591
Score = 575 bits (1482), Expect = e-161
Identities = 327/585 (55%), Positives = 394/585 (67%), Gaps = 21/585 (3%)
Frame = -1
Query: 1700 MEGNRRNFLNKRSNPHFKKSGSPRKGKQH---NTVHGESSENFRLSDTVYYILCQSTXXX 1530
M+G +RNFL K N FK+ G K N+ H + S NF DTVY +LC S
Sbjct: 1 MDGRKRNFLKKPMNTPFKRKGVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIG 60
Query: 1529 XXXXXXXXXXKALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDN--GDKAEK 1356
KALREETQAKITV DSV G DERVIII+S K ++S ++ G+ +
Sbjct: 61 GVIGKGGSIVKALREETQAKITVGDSVLGCDERVIIIYSSPMKVKTQNSDEDSRGENKKD 120
Query: 1355 EYDALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDE--TVASARLLVSNNMVGCLLGRK 1182
E ++P CAAQDALLKVH++I E+DL G +DD TV +ARLLV NNMVGCLLG++
Sbjct: 121 EVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALDDDNGNTVVTARLLVPNNMVGCLLGKR 180
Query: 1181 GDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRK 1002
GDVIQRLRSETGA+IR+LP+DHLP CA D LVQISGK + ++ALYEVSTLLH+NPRK
Sbjct: 181 GDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNPRK 240
Query: 1001 DKPPSSFSSPYASH--PPPYDGQGFHLSGPRTRNMLSPEYPTWLERNTDTHRMQPLPYKG 828
D PP SF P+A PPP + + P P W RN+ H + +P+
Sbjct: 241 DNPPLSFPVPHAGQNFPPP--------------SAIPPSNPMWSHRNSSPHDIPSMPWMV 286
Query: 827 GYGIRPSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGA 648
+G RPS FGP P EA +EF++KI+C A KIGGVIGKGG NVKQL+QETGA
Sbjct: 287 PHGNRPSGFGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGA 346
Query: 647 SIHVDNVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSS 468
IHV++ + ESDERVI VS+ E LW+PRSQTIDAIL LQNKTSE+SE+GT+TTRLLVPSS
Sbjct: 347 GIHVEDATIESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTRLLVPSS 406
Query: 467 KVGCILGQGGHVINDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEI 288
KVGCILGQGGHVIN+MRRRT ADIRV+SK ++KPKCAS DEELVQISG+FG+A+DAL EI
Sbjct: 407 KVGCILGQGGHVINEMRRRTQADIRVYSK-DDKPKCASEDEELVQISGNFGVAKDALAEI 465
Query: 287 ASRLRTRCLRDENTRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQ-DSV 111
ASRLR R LRD N E A V P+ GFGPA ++ GLP ++ I PG G YE +
Sbjct: 466 ASRLRVRTLRDVNAGAETAPVGPVNGFGPARSM-ADGLPPAAAIGPGRSGGYESFRGGGG 524
Query: 110 REYDPP---SFPPRATGYLDVN---EAKY-----SSVSAAAGSRI 9
REY+P S PP A Y ++N EAK SSV+ GS I
Sbjct: 525 REYEPQNNYSVPPAAVRYSNMNGALEAKILNNMSSSVTGTGGSTI 569
>gb|EOY04205.1| RNA-binding KH domain-containing protein isoform 4 [Theobroma cacao]
Length = 706
Score = 575 bits (1482), Expect = e-161
Identities = 327/585 (55%), Positives = 394/585 (67%), Gaps = 21/585 (3%)
Frame = -1
Query: 1700 MEGNRRNFLNKRSNPHFKKSGSPRKGKQH---NTVHGESSENFRLSDTVYYILCQSTXXX 1530
M+G +RNFL K N FK+ G K N+ H + S NF DTVY +LC S
Sbjct: 1 MDGRKRNFLKKPMNTPFKRKGVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIG 60
Query: 1529 XXXXXXXXXXKALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDN--GDKAEK 1356
KALREETQAKITV DSV G DERVIII+S K ++S ++ G+ +
Sbjct: 61 GVIGKGGSIVKALREETQAKITVGDSVLGCDERVIIIYSSPMKVKTQNSDEDSRGENKKD 120
Query: 1355 EYDALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDE--TVASARLLVSNNMVGCLLGRK 1182
E ++P CAAQDALLKVH++I E+DL G +DD TV +ARLLV NNMVGCLLG++
Sbjct: 121 EVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALDDDNGNTVVTARLLVPNNMVGCLLGKR 180
Query: 1181 GDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRK 1002
GDVIQRLRSETGA+IR+LP+DHLP CA D LVQISGK + ++ALYEVSTLLH+NPRK
Sbjct: 181 GDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNPRK 240
Query: 1001 DKPPSSFSSPYASH--PPPYDGQGFHLSGPRTRNMLSPEYPTWLERNTDTHRMQPLPYKG 828
D PP SF P+A PPP + + P P W RN+ H + +P+
Sbjct: 241 DNPPLSFPVPHAGQNFPPP--------------SAIPPSNPMWSHRNSSPHDIPSMPWMV 286
Query: 827 GYGIRPSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGA 648
+G RPS FGP P EA +EF++KI+C A KIGGVIGKGG NVKQL+QETGA
Sbjct: 287 PHGNRPSGFGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGA 346
Query: 647 SIHVDNVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSS 468
IHV++ + ESDERVI VS+ E LW+PRSQTIDAIL LQNKTSE+SE+GT+TTRLLVPSS
Sbjct: 347 GIHVEDATIESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTRLLVPSS 406
Query: 467 KVGCILGQGGHVINDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEI 288
KVGCILGQGGHVIN+MRRRT ADIRV+SK ++KPKCAS DEELVQISG+FG+A+DAL EI
Sbjct: 407 KVGCILGQGGHVINEMRRRTQADIRVYSK-DDKPKCASEDEELVQISGNFGVAKDALAEI 465
Query: 287 ASRLRTRCLRDENTRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQ-DSV 111
ASRLR R LRD N E A V P+ GFGPA ++ GLP ++ I PG G YE +
Sbjct: 466 ASRLRVRTLRDVNAGAETAPVGPVNGFGPARSM-ADGLPPAAAIGPGRSGGYESFRGGGG 524
Query: 110 REYDPP---SFPPRATGYLDVN---EAKY-----SSVSAAAGSRI 9
REY+P S PP A Y ++N EAK SSV+ GS I
Sbjct: 525 REYEPQNNYSVPPAAVRYSNMNGALEAKILNNMSSSVTGTGGSTI 569
>gb|EOY04203.1| RNA-binding KH domain-containing protein isoform 2 [Theobroma cacao]
Length = 580
Score = 575 bits (1482), Expect = e-161
Identities = 327/585 (55%), Positives = 394/585 (67%), Gaps = 21/585 (3%)
Frame = -1
Query: 1700 MEGNRRNFLNKRSNPHFKKSGSPRKGKQH---NTVHGESSENFRLSDTVYYILCQSTXXX 1530
M+G +RNFL K N FK+ G K N+ H + S NF DTVY +LC S
Sbjct: 1 MDGRKRNFLKKPMNTPFKRKGVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIG 60
Query: 1529 XXXXXXXXXXKALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDN--GDKAEK 1356
KALREETQAKITV DSV G DERVIII+S K ++S ++ G+ +
Sbjct: 61 GVIGKGGSIVKALREETQAKITVGDSVLGCDERVIIIYSSPMKVKTQNSDEDSRGENKKD 120
Query: 1355 EYDALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDE--TVASARLLVSNNMVGCLLGRK 1182
E ++P CAAQDALLKVH++I E+DL G +DD TV +ARLLV NNMVGCLLG++
Sbjct: 121 EVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALDDDNGNTVVTARLLVPNNMVGCLLGKR 180
Query: 1181 GDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRK 1002
GDVIQRLRSETGA+IR+LP+DHLP CA D LVQISGK + ++ALYEVSTLLH+NPRK
Sbjct: 181 GDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNPRK 240
Query: 1001 DKPPSSFSSPYASH--PPPYDGQGFHLSGPRTRNMLSPEYPTWLERNTDTHRMQPLPYKG 828
D PP SF P+A PPP + + P P W RN+ H + +P+
Sbjct: 241 DNPPLSFPVPHAGQNFPPP--------------SAIPPSNPMWSHRNSSPHDIPSMPWMV 286
Query: 827 GYGIRPSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGA 648
+G RPS FGP P EA +EF++KI+C A KIGGVIGKGG NVKQL+QETGA
Sbjct: 287 PHGNRPSGFGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGA 346
Query: 647 SIHVDNVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSS 468
IHV++ + ESDERVI VS+ E LW+PRSQTIDAIL LQNKTSE+SE+GT+TTRLLVPSS
Sbjct: 347 GIHVEDATIESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTRLLVPSS 406
Query: 467 KVGCILGQGGHVINDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEI 288
KVGCILGQGGHVIN+MRRRT ADIRV+SK ++KPKCAS DEELVQISG+FG+A+DAL EI
Sbjct: 407 KVGCILGQGGHVINEMRRRTQADIRVYSK-DDKPKCASEDEELVQISGNFGVAKDALAEI 465
Query: 287 ASRLRTRCLRDENTRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQ-DSV 111
ASRLR R LRD N E A V P+ GFGPA ++ GLP ++ I PG G YE +
Sbjct: 466 ASRLRVRTLRDVNAGAETAPVGPVNGFGPARSM-ADGLPPAAAIGPGRSGGYESFRGGGG 524
Query: 110 REYDPP---SFPPRATGYLDVN---EAKY-----SSVSAAAGSRI 9
REY+P S PP A Y ++N EAK SSV+ GS I
Sbjct: 525 REYEPQNNYSVPPAAVRYSNMNGALEAKILNNMSSSVTGTGGSTI 569
>gb|EOY04202.1| RNA-binding KH domain-containing protein isoform 1 [Theobroma cacao]
gi|508712307|gb|EOY04204.1| RNA-binding KH
domain-containing protein isoform 1 [Theobroma cacao]
Length = 706
Score = 575 bits (1482), Expect = e-161
Identities = 327/585 (55%), Positives = 394/585 (67%), Gaps = 21/585 (3%)
Frame = -1
Query: 1700 MEGNRRNFLNKRSNPHFKKSGSPRKGKQH---NTVHGESSENFRLSDTVYYILCQSTXXX 1530
M+G +RNFL K N FK+ G K N+ H + S NF DTVY +LC S
Sbjct: 1 MDGRKRNFLKKPMNTPFKRKGVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIG 60
Query: 1529 XXXXXXXXXXKALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDN--GDKAEK 1356
KALREETQAKITV DSV G DERVIII+S K ++S ++ G+ +
Sbjct: 61 GVIGKGGSIVKALREETQAKITVGDSVLGCDERVIIIYSSPMKVKTQNSDEDSRGENKKD 120
Query: 1355 EYDALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDE--TVASARLLVSNNMVGCLLGRK 1182
E ++P CAAQDALLKVH++I E+DL G +DD TV +ARLLV NNMVGCLLG++
Sbjct: 121 EVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALDDDNGNTVVTARLLVPNNMVGCLLGKR 180
Query: 1181 GDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRK 1002
GDVIQRLRSETGA+IR+LP+DHLP CA D LVQISGK + ++ALYEVSTLLH+NPRK
Sbjct: 181 GDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNPRK 240
Query: 1001 DKPPSSFSSPYASH--PPPYDGQGFHLSGPRTRNMLSPEYPTWLERNTDTHRMQPLPYKG 828
D PP SF P+A PPP + + P P W RN+ H + +P+
Sbjct: 241 DNPPLSFPVPHAGQNFPPP--------------SAIPPSNPMWSHRNSSPHDIPSMPWMV 286
Query: 827 GYGIRPSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGA 648
+G RPS FGP P EA +EF++KI+C A KIGGVIGKGG NVKQL+QETGA
Sbjct: 287 PHGNRPSGFGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGA 346
Query: 647 SIHVDNVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSS 468
IHV++ + ESDERVI VS+ E LW+PRSQTIDAIL LQNKTSE+SE+GT+TTRLLVPSS
Sbjct: 347 GIHVEDATIESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTRLLVPSS 406
Query: 467 KVGCILGQGGHVINDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEI 288
KVGCILGQGGHVIN+MRRRT ADIRV+SK ++KPKCAS DEELVQISG+FG+A+DAL EI
Sbjct: 407 KVGCILGQGGHVINEMRRRTQADIRVYSK-DDKPKCASEDEELVQISGNFGVAKDALAEI 465
Query: 287 ASRLRTRCLRDENTRGEPASVRPLPGFGPAGNLRGGGLPVSSNIVPGSLGRYEHLQ-DSV 111
ASRLR R LRD N E A V P+ GFGPA ++ GLP ++ I PG G YE +
Sbjct: 466 ASRLRVRTLRDVNAGAETAPVGPVNGFGPARSM-ADGLPPAAAIGPGRSGGYESFRGGGG 524
Query: 110 REYDPP---SFPPRATGYLDVN---EAKY-----SSVSAAAGSRI 9
REY+P S PP A Y ++N EAK SSV+ GS I
Sbjct: 525 REYEPQNNYSVPPAAVRYSNMNGALEAKILNNMSSSVTGTGGSTI 569
>ref|XP_004304132.1| PREDICTED: KH domain-containing protein At4g18375-like [Fragaria
vesca subsp. vesca]
Length = 760
Score = 575 bits (1481), Expect = e-161
Identities = 324/568 (57%), Positives = 391/568 (68%), Gaps = 6/568 (1%)
Frame = -1
Query: 1700 MEGNRRNFLNKRSNPHFKKSGSP-RKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXXX 1524
M+ N+RN L++R FK+ GS +KG +N+ +SS N + +TVY ILC S
Sbjct: 1 MDWNKRNVLSQRPTVQFKRKGSSNQKGNLNNSNREQSSGNAQSLETVYRILCPSKKIGGV 60
Query: 1523 XXXXXXXXKALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYDA 1344
K+LREET++KITVSDSVPGSDERVIIIFSP K +++ + D E
Sbjct: 61 IGKGGGIIKSLREETRSKITVSDSVPGSDERVIIIFSPPTKISRKQNSDEDSHKADEQKP 120
Query: 1343 LKPHCAAQDALLKVHNRIVEEDL-GGTKKGNDDETVASARLLVSNNMVGCLLGRKGDVIQ 1167
L+PHCAAQDALLKVH+RIVEEDL G +D+E + RLLV NN+VGCLLG++GDVIQ
Sbjct: 121 LEPHCAAQDALLKVHDRIVEEDLYDGVTFDDDNENIVVTRLLVPNNLVGCLLGKRGDVIQ 180
Query: 1166 RLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKPPS 987
RLRSET ANIRVLP+D LP CA D LVQISGKP + +KALYEVSTLLH+NPRKDKPP
Sbjct: 181 RLRSETRANIRVLPADQLPTCAMDTDELVQISGKPDVAKKALYEVSTLLHQNPRKDKPPL 240
Query: 986 SFSSPYASHPPPYDGQGFHLSGPRTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGIRPS 807
+ P+ GQGFHL G NM P P W R +H M P+P+ G S
Sbjct: 241 GLAIPFG-------GQGFHLRG--APNMFPPGNPIWPNREP-SHGMPPMPWIGECENHSS 290
Query: 806 AFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHVDNV 627
+G FDG H EA +EF +KI+CSA KIGGVIGKGG NVKQL++ETGA+IHV +
Sbjct: 291 GYGRGGFDGDPAGHGVEASAEFFIKILCSAGKIGGVIGKGGFNVKQLQEETGANIHVQDA 350
Query: 626 SKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGCILG 447
S +S+ERVI VS+FE L PRSQTI+AIL LQNK SE S++GTITTRLLVPSSKVGCILG
Sbjct: 351 STDSEERVIRVSAFEVLRIPRSQTIEAILQLQNKASELSDKGTITTRLLVPSSKVGCILG 410
Query: 446 QGGHVINDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIASRLRTR 267
QGG VIN+MRRRT ADIRV+SK +++PKCA DEELVQISG+F +A+DAL EI SRLR R
Sbjct: 411 QGGQVINEMRRRTQADIRVYSK-DDRPKCADEDEELVQISGNFAVAKDALAEITSRLRIR 469
Query: 266 CLRDENTRGEPASVRPLPGFGPAGNLRGGGLPVS-SNIVPGSLGRYEHLQDSVREYDPPS 90
LRD N E A V P P FGP G+L G+P S + GS GRY+HL+ EY+P
Sbjct: 470 TLRDTNAGEEHAPVGPPPRFGPPGSLPVKGMPPPLSAVRAGSSGRYDHLKVGRHEYEPEG 529
Query: 89 F--PPRATGYLDVNEAKYSSV-SAAAGS 15
+ PP A+GY VN A S + + A GS
Sbjct: 530 YPVPPAASGYQRVNRALDSRIPNNAVGS 557
>gb|AEV43362.1| poly C-binding protein [Citrus sinensis]
Length = 569
Score = 489 bits (1260), Expect = e-135
Identities = 260/441 (58%), Positives = 314/441 (71%), Gaps = 4/441 (0%)
Frame = -1
Query: 1700 MEGNRRNFLNKRSNPHFKKSG--SPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXX 1527
M+ ++RNF KR N FK+ G +KG N+ +S N + +DTVY ILC S
Sbjct: 1 MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60
Query: 1526 XXXXXXXXXKALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYD 1347
K+LREETQAKITV+D++PGS+ERVIII+S K AK + D+ AE + +
Sbjct: 61 VIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE 120
Query: 1346 ALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDE--TVASARLLVSNNMVGCLLGRKGDV 1173
+++PHCAAQDALLKVH+RI+EEDL G +DD + +ARLLV NNMVGCLLG++GDV
Sbjct: 121 SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDV 180
Query: 1172 IQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKP 993
IQRLRSETGANIRVLP+D LP CA D +VQISGKP + ++ALYEVSTLLH+NPRKDKP
Sbjct: 181 IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKP 240
Query: 992 PSSFSSPYASHPPPYDGQGFHLSGPRTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGIR 813
PSSF P Y GQ FH +M +W RN+ H M P+ GGYG +
Sbjct: 241 PSSF-------PQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQ 293
Query: 812 PSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHVD 633
PS G + P E +EF++KI+CSA KIGGVIGKGG NVKQL+QETGASIHV+
Sbjct: 294 PSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE 353
Query: 632 NVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGCI 453
+ +SDERVI S+FE LW+PRSQTIDAIL LQNKTSE+SE+GTITTRLLVPSSKVGCI
Sbjct: 354 DAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCI 413
Query: 452 LGQGGHVINDMRRRTHADIRV 390
LGQGGHVIN+MRRRT ADIRV
Sbjct: 414 LGQGGHVINEMRRRTQADIRV 434
Score = 105 bits (263), Expect = 5e-20
Identities = 74/226 (32%), Positives = 109/226 (48%), Gaps = 39/226 (17%)
Frame = -1
Query: 752 PSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHVDNVSKESDERVICVSSF---- 585
P++ +I+C + KIGGVIGK G+ VK L +ET A I V + S+ERVI + S
Sbjct: 44 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 103
Query: 584 ---------------EALWDPRSQTIDAILHLQNKTSEY-----------SEEGTITTRL 483
+ +P DA+L + ++ E +E TIT RL
Sbjct: 104 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 163
Query: 482 LVPSSKVGCILGQGGHVINDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARD 303
LVP++ VGC+LG+ G VI +R T A+IRV + P CA +E+VQISG +A+
Sbjct: 164 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVL-PADRLPPCAMNTDEMVQISGKPNVAKR 222
Query: 302 ALVEIASRLRTRCLRDENTRGEPASV---------RPLPGFGPAGN 192
AL E+++ L +D+ P + P+ P GN
Sbjct: 223 ALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 268
>gb|EOY04207.1| RNA-binding KH domain-containing protein isoform 6, partial
[Theobroma cacao]
Length = 530
Score = 381 bits (978), Expect = e-103
Identities = 212/371 (57%), Positives = 255/371 (68%), Gaps = 14/371 (3%)
Frame = -1
Query: 1079 QISGKPAIVRKALYEVSTLLHRNPRKDKPPSSFSSPYASH--PPPYDGQGFHLSGPRTRN 906
+ISGK + ++ALYEVSTLLH+NPRKD PP SF P+A PPP +
Sbjct: 39 KISGKRDVAKRALYEVSTLLHQNPRKDNPPLSFPVPHAGQNFPPP--------------S 84
Query: 905 MLSPEYPTWLERNTDTHRMQPLPYKGGYGIRPSAFGPDDFDGVTPPHDREAPSEFTLKII 726
+ P P W RN+ H + +P+ +G RPS FGP P EA +EF++KI+
Sbjct: 85 AIPPSNPMWSHRNSSPHDIPSMPWMVPHGNRPSGFGPGSLSSFPPARGAEASAEFSMKIL 144
Query: 725 CSAEKIGGVIGKGGSNVKQLEQETGASIHVDNVSKESDERVICVSSFEALWDPRSQTIDA 546
C A KIGGVIGKGG NVKQL+QETGA IHV++ + ESDERVI VS+ E LW+PRSQTIDA
Sbjct: 145 CPAGKIGGVIGKGGFNVKQLQQETGAGIHVEDATIESDERVIRVSAIEGLWNPRSQTIDA 204
Query: 545 ILHLQNKTSEYSEEGTITTRLLVPSSKVGCILGQGGHVINDMRRRTHADIRVFSKEEEKP 366
IL LQNKTSE+SE+GT+TTRLLVPSSKVGCILGQGGHVIN+MRRRT ADIRV+SK ++KP
Sbjct: 205 ILQLQNKTSEFSEKGTVTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSK-DDKP 263
Query: 365 KCASRDEELVQISGSFGIARDALVEIASRLRTRCLRDENTRGEPASVRPLPGFGPAGNLR 186
KCAS DEELVQISG+FG+A+DAL EIASRLR R LRD N E A V P+ GFGPA ++
Sbjct: 264 KCASEDEELVQISGNFGVAKDALAEIASRLRVRTLRDVNAGAETAPVGPVNGFGPARSM- 322
Query: 185 GGGLPVSSNIVPGSLGRYEHLQ-DSVREYDPP---SFPPRATGYLDVN---EAKY----- 42
GLP ++ I PG G YE + REY+P S PP A Y ++N EAK
Sbjct: 323 ADGLPPAAAIGPGRSGGYESFRGGGGREYEPQNNYSVPPAAVRYSNMNGALEAKILNNMS 382
Query: 41 SSVSAAAGSRI 9
SSV+ GS I
Sbjct: 383 SSVTGTGGSTI 393
Score = 76.3 bits (186), Expect = 4e-11
Identities = 58/174 (33%), Positives = 83/174 (47%)
Frame = -1
Query: 1493 LREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYDALKPHCAAQDA 1314
L++ET A I V D+ SDERVI R S G P DA
Sbjct: 164 LQQETGAGIHVEDATIESDERVI-----------RVSAIEG--------LWNPRSQTIDA 204
Query: 1313 LLKVHNRIVEEDLGGTKKGNDDETVASARLLVSNNMVGCLLGRKGDVIQRLRSETGANIR 1134
+L++ N+ E GT + RLLV ++ VGC+LG+ G VI +R T A+IR
Sbjct: 205 ILQLQNKTSEFSEKGT---------VTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 255
Query: 1133 VLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKPPSSFSSP 972
V D P CA ++ LVQISG + + AL E+++ L +D + ++P
Sbjct: 256 VYSKDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTLRDVNAGAETAP 309
>ref|XP_006661902.1| PREDICTED: KH domain-containing protein At4g18375-like [Oryza
brachyantha]
Length = 773
Score = 375 bits (963), Expect = e-101
Identities = 236/504 (46%), Positives = 304/504 (60%), Gaps = 11/504 (2%)
Frame = -1
Query: 1688 RRNFLNKRSNPHFKKSGSPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXXXXXXXX 1509
R N R PH + RK K+ NT H + S + + ++T+Y ILC
Sbjct: 8 RHNLSTSRKRPH--SNSDDRKRKRLNTKHDDGSMSSQPTETIYRILCPVKKIGSVLGRGG 65
Query: 1508 XXXKALREETQAKITVSDSVPGSDERVIIIFS-PS---DKQAKRHSGDNGDKAEKEYDAL 1341
KALR+ET+AKI V+DS+PG+DERVIIIF+ PS D +A ++ +G + +
Sbjct: 66 DVVKALRDETKAKIRVADSIPGADERVIIIFNYPSQSEDDEAAQNISTDG------FQNM 119
Query: 1340 KPHCAAQDALLKVHNRIVE-EDLGGTKKGNDDETV--ASARLLVSNNMVGCLLGRKGDVI 1170
KPHC AQDALLK+H++I E EDL G ETV +AR+LV N VGCLLG+ G +I
Sbjct: 120 KPHCFAQDALLKIHDKIAEDEDLHGGIDHEKSETVDGVTARILVPGNQVGCLLGKGGSII 179
Query: 1169 QRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKPP 990
Q+LR+ETGA IRVLPS++LP CA ++D LVQISG P++VRKALYE+ST LH++PRKD PP
Sbjct: 180 QQLRNETGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKDNPP 239
Query: 989 SS---FSSPYASHPPPYDGQGFHLSGPRTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYG 819
+S H P + P SP+ P D +R PL Y G
Sbjct: 240 LEEIIDASTQRKHQSPPQLPHANPMLPHLHVDHSPQIPL-----LDPYRNGPLRYHAG-- 292
Query: 818 IRPSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIH 639
EF++KI+C++E IG VIGK G NV+Q+EQ+TGA I
Sbjct: 293 ---------------------EAEEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGARIQ 331
Query: 638 VDNVSKE-SDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKV 462
V V K S ER+I VSS E DP S TI+A++ L +K S +E +TTRL+VPS+KV
Sbjct: 332 VKEVGKNASGERLIVVSSQEIPDDPVSPTIEALILLHSKVSAPAENRHLTTRLVVPSNKV 391
Query: 461 GCILGQGGHVINDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIAS 282
GCILG+GG VI +MRRRT A+IRV+SK +KPK S DEELVQ++G IAR AL EIAS
Sbjct: 392 GCILGEGGKVITEMRRRTGAEIRVYSK-ADKPKYLSFDEELVQVAGLPAIARGALTEIAS 450
Query: 281 RLRTRCLRDENTRGEPASVRPLPG 210
RLRTR LRD ++ P P G
Sbjct: 451 RLRTRTLRDGSSSNNPPPFAPFDG 474
Score = 69.7 bits (169), Expect = 4e-09
Identities = 76/290 (26%), Positives = 119/290 (41%), Gaps = 6/290 (2%)
Frame = -1
Query: 1604 HGESSENFRLSDTVYYILCQSTXXXXXXXXXXXXXKALREETQAKITVSD-SVPGSDERV 1428
H +E F + ILC S + + ++T A+I V + S ER+
Sbjct: 290 HAGEAEEFSIK-----ILCASEHIGQVIGKSGGNVRQVEQQTGARIQVKEVGKNASGERL 344
Query: 1427 IIIFSPSDKQAKRHSGDNGDKAEKEYDALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDD 1248
I++ S E D + P +AL+ +H+++ +
Sbjct: 345 IVVSSQ----------------EIPDDPVSPTI---EALILLHSKV---------SAPAE 376
Query: 1247 ETVASARLLVSNNMVGCLLGRKGDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISG 1068
+ RL+V +N VGC+LG G VI +R TGA IRV P ++ LVQ++G
Sbjct: 377 NRHLTTRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAG 436
Query: 1067 KPAIVRKALYEVSTLLHRNPRKDKPPSSFSSPYASHPPPYDGQGFHLSGPRTRNMLSPEY 888
PAI R AL E+++ L +D S+ P+A P+D GP + S E+
Sbjct: 437 LPAIARGALTEIASRLRTRTLRDGSSSNNPPPFA----PFD-------GPPVDVLPSREF 485
Query: 887 PTWLERNTDTHRMQPLPYKG-----GYGIRPSAFGPDDFDGVTPPHDREA 753
+ + + PY G YG RP+ P + PP+ R A
Sbjct: 486 MLYRQSANNP------PYGGPANDPPYG-RPANDPPYGRTAIDPPYGRPA 528
>gb|AAP54423.2| KH domain containing protein, expressed [Oryza sativa Japonica Group]
Length = 677
Score = 360 bits (923), Expect = 2e-96
Identities = 227/504 (45%), Positives = 303/504 (60%), Gaps = 10/504 (1%)
Frame = -1
Query: 1691 NRRNFLN-KRSNPHFKKSGSPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXXXXXX 1515
+RR+ N R PHF RK + N+ H + + + +T+Y ILC
Sbjct: 6 SRRHKSNTSRKRPHFNSDDGKRK--RLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGR 63
Query: 1514 XXXXXKALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYDALKP 1335
KALR+ T+AKI V+DS+PG+DERVIIIF+ S + + + D ++ +KP
Sbjct: 64 GGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDG----FEDMKP 119
Query: 1334 HCAAQDALLKVHNRIV-EEDLGG----TKKGNDDETVASARLLVSNNMVGCLLGRKGDVI 1170
HC AQDALLK+H++I +EDL K N D+ +A R+LV N VGCLLG+ G +I
Sbjct: 120 HCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIA--RILVPGNQVGCLLGKGGSII 177
Query: 1169 QRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKPP 990
Q+LR++TGA IRVLPS++LP CA ++D LVQISG ++VRKALYE+ST LH++PRKD PP
Sbjct: 178 QQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPP 237
Query: 989 SS---FSSPYASHPPPYDGQGFHLSGPRTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYG 819
+S H P + P SP+ P D +R +PL Y
Sbjct: 238 LEEIIDASTQRKHQAPPQLPHANPMLPHLHVDHSPQIPL-----LDPYRNRPLQY----- 287
Query: 818 IRPSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIH 639
H EA EF++KI+C++E IG VIGK G NV+Q+EQ+TGA +
Sbjct: 288 -----------------HSAEA-EEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQ 329
Query: 638 VDNVSKE-SDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKV 462
V V K S+ER+I VSS E DP S TI+A++ L +K S +E +TTRL+VPS+KV
Sbjct: 330 VKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHHLTTRLVVPSNKV 389
Query: 461 GCILGQGGHVINDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIAS 282
GCI+G+GG VI +MRRRT A+IRV+SK +KPK S DEELVQ++G IAR AL EIAS
Sbjct: 390 GCIIGEGGKVITEMRRRTGAEIRVYSK-ADKPKYLSFDEELVQVAGLPAIARGALTEIAS 448
Query: 281 RLRTRCLRDENTRGEPASVRPLPG 210
RLRTR LRD ++ P P G
Sbjct: 449 RLRTRTLRDGSSSNNPTPFAPFDG 472
Score = 69.7 bits (169), Expect = 4e-09
Identities = 76/285 (26%), Positives = 119/285 (41%), Gaps = 1/285 (0%)
Frame = -1
Query: 1604 HGESSENFRLSDTVYYILCQSTXXXXXXXXXXXXXKALREETQAKITVSD-SVPGSDERV 1428
H +E F + ILC S + + ++T A + V + S+ER+
Sbjct: 288 HSAEAEEFSIK-----ILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERL 342
Query: 1427 IIIFSPSDKQAKRHSGDNGDKAEKEYDALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDD 1248
I++ S E D + P +AL+ +H+++ T N
Sbjct: 343 IVVSSQ----------------EIPDDPVSPTI---EALILLHSKV------STLAENHH 377
Query: 1247 ETVASARLLVSNNMVGCLLGRKGDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISG 1068
T RL+V +N VGC++G G VI +R TGA IRV P ++ LVQ++G
Sbjct: 378 LTT---RLVVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAG 434
Query: 1067 KPAIVRKALYEVSTLLHRNPRKDKPPSSFSSPYASHPPPYDGQGFHLSGPRTRNMLSPEY 888
PAI R AL E+++ L +D S+ +P+A P+DG + P ML
Sbjct: 435 LPAIARGALTEIASRLRTRTLRDGSSSNNPTPFA----PFDGPPVDIL-PNREFML---- 485
Query: 887 PTWLERNTDTHRMQPLPYKGGYGIRPSAFGPDDFDGVTPPHDREA 753
R+ ++ P YG RP+ P + PP+ R A
Sbjct: 486 ---YGRSANSPPYGGPPNDPPYG-RPAIDPPYGRPAIDPPYGRPA 526
>ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group] gi|22128716|gb|AAM92828.1|
putative RNA-binding protein [Oryza sativa Japonica
Group] gi|110289325|gb|ABB47821.2| KH domain containing
protein, expressed [Oryza sativa Japonica Group]
gi|113639556|dbj|BAF26861.1| Os10g0495000 [Oryza sativa
Japonica Group] gi|215694845|dbj|BAG90036.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 762
Score = 360 bits (923), Expect = 2e-96
Identities = 227/504 (45%), Positives = 303/504 (60%), Gaps = 10/504 (1%)
Frame = -1
Query: 1691 NRRNFLN-KRSNPHFKKSGSPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXXXXXX 1515
+RR+ N R PHF RK + N+ H + + + +T+Y ILC
Sbjct: 6 SRRHKSNTSRKRPHFNSDDGKRK--RLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGR 63
Query: 1514 XXXXXKALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYDALKP 1335
KALR+ T+AKI V+DS+PG+DERVIIIF+ S + + + D ++ +KP
Sbjct: 64 GGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDG----FEDMKP 119
Query: 1334 HCAAQDALLKVHNRIV-EEDLGG----TKKGNDDETVASARLLVSNNMVGCLLGRKGDVI 1170
HC AQDALLK+H++I +EDL K N D+ +A R+LV N VGCLLG+ G +I
Sbjct: 120 HCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIA--RILVPGNQVGCLLGKGGSII 177
Query: 1169 QRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKPP 990
Q+LR++TGA IRVLPS++LP CA ++D LVQISG ++VRKALYE+ST LH++PRKD PP
Sbjct: 178 QQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPP 237
Query: 989 SS---FSSPYASHPPPYDGQGFHLSGPRTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYG 819
+S H P + P SP+ P D +R +PL Y
Sbjct: 238 LEEIIDASTQRKHQAPPQLPHANPMLPHLHVDHSPQIPL-----LDPYRNRPLQY----- 287
Query: 818 IRPSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIH 639
H EA EF++KI+C++E IG VIGK G NV+Q+EQ+TGA +
Sbjct: 288 -----------------HSAEA-EEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQ 329
Query: 638 VDNVSKE-SDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKV 462
V V K S+ER+I VSS E DP S TI+A++ L +K S +E +TTRL+VPS+KV
Sbjct: 330 VKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHHLTTRLVVPSNKV 389
Query: 461 GCILGQGGHVINDMRRRTHADIRVFSKEEEKPKCASRDEELVQISGSFGIARDALVEIAS 282
GCI+G+GG VI +MRRRT A+IRV+SK +KPK S DEELVQ++G IAR AL EIAS
Sbjct: 390 GCIIGEGGKVITEMRRRTGAEIRVYSK-ADKPKYLSFDEELVQVAGLPAIARGALTEIAS 448
Query: 281 RLRTRCLRDENTRGEPASVRPLPG 210
RLRTR LRD ++ P P G
Sbjct: 449 RLRTRTLRDGSSSNNPTPFAPFDG 472
Score = 69.7 bits (169), Expect = 4e-09
Identities = 76/285 (26%), Positives = 119/285 (41%), Gaps = 1/285 (0%)
Frame = -1
Query: 1604 HGESSENFRLSDTVYYILCQSTXXXXXXXXXXXXXKALREETQAKITVSD-SVPGSDERV 1428
H +E F + ILC S + + ++T A + V + S+ER+
Sbjct: 288 HSAEAEEFSIK-----ILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERL 342
Query: 1427 IIIFSPSDKQAKRHSGDNGDKAEKEYDALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDD 1248
I++ S E D + P +AL+ +H+++ T N
Sbjct: 343 IVVSSQ----------------EIPDDPVSPTI---EALILLHSKV------STLAENHH 377
Query: 1247 ETVASARLLVSNNMVGCLLGRKGDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISG 1068
T RL+V +N VGC++G G VI +R TGA IRV P ++ LVQ++G
Sbjct: 378 LTT---RLVVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAG 434
Query: 1067 KPAIVRKALYEVSTLLHRNPRKDKPPSSFSSPYASHPPPYDGQGFHLSGPRTRNMLSPEY 888
PAI R AL E+++ L +D S+ +P+A P+DG + P ML
Sbjct: 435 LPAIARGALTEIASRLRTRTLRDGSSSNNPTPFA----PFDGPPVDIL-PNREFML---- 485
Query: 887 PTWLERNTDTHRMQPLPYKGGYGIRPSAFGPDDFDGVTPPHDREA 753
R+ ++ P YG RP+ P + PP+ R A
Sbjct: 486 ---YGRSANSPPYGGPPNDPPYG-RPAIDPPYGRPAIDPPYGRPA 526