BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00012673
         (672 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A...   142   1e-31
ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein A...   125   1e-26
ref|XP_004295654.1| PREDICTED: uncharacterized protein LOC101314...   121   2e-25
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...   116   7e-24
gb|ABD32279.2| reverse transcriptase, putative [Medicago truncat...   109   7e-22
ref|XP_002522932.1| conserved hypothetical protein [Ricinus comm...    95   2e-17
gb|EOY06960.1| Uncharacterized protein TCM_021522 [Theobroma cacao]    94   5e-17
gb|EOY17513.1| Uncharacterized protein TCM_036737 [Theobroma cacao]    93   6e-17
gb|EOY02239.1| Uncharacterized protein TCM_016763 [Theobroma cacao]    87   4e-15
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...    87   4e-15
gb|AAM09536.1| reverse transcriptase [Medicago sativa]                 87   4e-15
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    87   4e-15
gb|EOY14356.1| Uncharacterized protein TCM_033752 [Theobroma cacao]    87   6e-15
ref|XP_004297900.1| PREDICTED: putative ribonuclease H protein A...    87   6e-15
gb|EOY25454.1| Uncharacterized protein TCM_026877 [Theobroma cacao]    86   8e-15
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              86   1e-14
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              86   1e-14
gb|EOY24339.1| RNA-directed DNA polymerase (Reverse transcriptas...    84   3e-14
gb|EOY02234.1| Uncharacterized protein TCM_011921 [Theobroma cacao]    83   7e-14
gb|EOY17514.1| Uncharacterized protein TCM_042330 [Theobroma cacao]    83   9e-14

>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 872

 Score =  142 bits (357), Expect = 1e-31
 Identities = 79/226 (34%), Positives = 126/226 (55%), Gaps = 3/226 (1%)
 Frame = +2

Query: 2   TLLRQMEKAMRNFIWTGDVNSKGSVVVNWSRCCMPRAEGGLGVRSIVVANNAFLMKLGWK 181
           +LLR++E+  RNF+W+GD++ +G  +V+W+ CC P  EGGLG++ + V N++ L+K  W+
Sbjct: 318 SLLRKVERWCRNFLWSGDIDKRGIPLVSWTSCCAPIDEGGLGLKKLDVLNSSLLLKRCWE 377

Query: 182 IMTSNSLVYNILRRRFLASDGSPRHSFIPSSIWRGIRPGISGFLEDCRWIPGCNSGVRFW 361
           I TS+      +R RF     S R S+ PSSIW G+R        + RW+ G    + FW
Sbjct: 378 IFTSSFEGCCFIRNRF-----SKRRSYAPSSIWPGVRKFWGLVQNNTRWLVGTGDKISFW 432

Query: 362 LDNWLGYIIADRIGIPEEYRHLFRHRISDYFYDGTWHFTFSFIEAYLDMVRDIV-RVPIT 538
            DN+LG  + +  G            +SDY  +G+W      ++  L  V +++ +VPI+
Sbjct: 433 RDNFLGRPLIEFFGNHGALND-NSSLVSDYIDNGSWVLP-PLLQLNLSAVCNLICQVPIS 490

Query: 539 --PASSDTRVWLHSDDGCITSKSAYTFLRPRAPTVHWGSWIWSPHI 670
             P+  D  +W  S  G +T+K A+ FL+  +P V WG  +WS  I
Sbjct: 491 INPSMEDKLIWQASSTGELTAKQAFLFLQQASPVVPWGKPLWSKFI 536


>ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 751

 Score =  125 bits (314), Expect = 1e-26
 Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 2/225 (0%)
 Frame = +2

Query: 2   TLLRQMEKAMRNFIWTGDVNSKGSVVVNWSRCCMPRAEGGLGVRSIVVANNAFLMKLGWK 181
           +LL  +    RNFIW+GD+  +  V ++W + C PR E GL +R++     A L+ L W+
Sbjct: 258 SLLSHLSACARNFIWSGDLAIRKLVTISWQQVCTPRNEAGLDLRNLKALYTAGLISLAWQ 317

Query: 182 IMTSNSLVYNILRRRFLASDGSPRHSFIPSSIWRGIRPGISGFLEDCRWIPGCNSGVRFW 361
            +  +S   +   RRF       +  +  SS+W G++  +    E  RWI G  + + FW
Sbjct: 318 TLLQSSSWGSFACRRFTIF-RHMKFQYFTSSVWHGLKRVLPLLFEHSRWIIGDGNSILFW 376

Query: 362 LDNWLGYIIADRIGIPEEYRHLFRHRISDYFYDGTWHFTFSFIEAYLDMVRDIVRVPI-- 535
            D WL   I  ++ +     HL   R++D+ +D  W     F   + D  + I+ +P+  
Sbjct: 377 SDKWLHSSIIQQLNM-GSLSHLLNSRVADFIWDQQWALPSHFSNLFPDCAKQILEIPLPN 435

Query: 536 TPASSDTRVWLHSDDGCITSKSAYTFLRPRAPTVHWGSWIWSPHI 670
           TP  SD  +W HS  G  +    Y  +RP    + W S +W   I
Sbjct: 436 TP-ESDILIWEHSSSGIFSFSDGYELVRPYFEKLDWASSVWHSFI 479


>ref|XP_004295654.1| PREDICTED: uncharacterized protein LOC101314263 [Fragaria vesca
            subsp. vesca]
          Length = 839

 Score =  121 bits (303), Expect = 2e-25
 Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 1/201 (0%)
 Frame = +2

Query: 53   DVNSKGSVVVNWSRCCMPRAEGGLGVRSIVVANNAFLMKLGWKIMTSNSLVYNILRRRFL 232
            +V+ +    V W +CC P  EGGLGVR+I+  N AFL+K  W  +T ++        RFL
Sbjct: 423  NVSCRAYYPVAWKKCCAPLKEGGLGVRNIMALNQAFLLKKFWDFLTKSTTAAAFFSARFL 482

Query: 233  ASDGSPRHSFIPSSIWRGIRPGISGFLEDCRWIPGCNSGVRFWLDNWLGYIIADRIGIPE 412
               G P   +  SSIW G+RP  +  L + +W+ G    + FW  NWL   I D++GI  
Sbjct: 483  QRSGQPCSYYKRSSIWPGMRPLFTDILYNSKWVVGNGHSIDFWHGNWLNGSIIDKLGIVH 542

Query: 413  EYRHLFRHRISDYFYDGTWHFTFSFIEAYLDMVRDIVRVPITPASSDTR-VWLHSDDGCI 589
            +       ++SD+  +G+W  + +       +  +I+ + +     D + VWL S +G +
Sbjct: 543  QLGKSLCGKVSDFILNGSWLCSTNLNAELAALWSEILAIQLPSYDIDDKLVWLDSLEGSL 602

Query: 590  TSKSAYTFLRPRAPTVHWGSW 652
            +   AY F   +  +V W  W
Sbjct: 603  SLSIAYEFKISKQASVPWDRW 623


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score =  116 bits (290), Expect = 7e-24
 Identities = 61/180 (33%), Positives = 95/180 (52%)
 Frame = +2

Query: 80   VNWSRCCMPRAEGGLGVRSIVVANNAFLMKLGWKIMTSNSLVYNILRRRFLASDGSPRHS 259
            V+W   C P +EGGL ++S  + NNA ++KL W +++SNS    +L+RRF  S G P   
Sbjct: 776  VSWKILCRPWSEGGLDIKSTRLINNAAMLKLAWNLLSSNSQWAVLLKRRFF-SQGQPIRY 834

Query: 260  FIPSSIWRGIRPGISGFLEDCRWIPGCNSGVRFWLDNWLGYIIADRIGIPEEYRHLFRHR 439
            F+ SS+W G++  +S   ++  WI G    +  W +NWLG  +     I   +   F  +
Sbjct: 835  FVKSSVWHGVKNHMSILRQNKLWIVGTGDRINLWTNNWLGEPLVTLFNIDPFFHASFTGK 894

Query: 440  ISDYFYDGTWHFTFSFIEAYLDMVRDIVRVPITPASSDTRVWLHSDDGCITSKSAYTFLR 619
            +S+   +G W    S +   +      + +P T    D+ VW HS DG +TSK A +FLR
Sbjct: 895  VSEVIVNGNWDLPASLLVPEVTSRLASITLPRTEL-PDSLVWTHSADGQLTSKHAVSFLR 953


>gb|ABD32279.2| reverse transcriptase, putative [Medicago truncatula]
          Length = 480

 Score =  109 bits (273), Expect = 7e-22
 Identities = 58/192 (30%), Positives = 92/192 (47%)
 Frame = +2

Query: 5   LLRQMEKAMRNFIWTGDVNSKGSVVVNWSRCCMPRAEGGLGVRSIVVANNAFLMKLGWKI 184
           LL Q++  ++NFIW+GD+ +     V+W   C P A GGL ++   + N + ++ L W+ 
Sbjct: 288 LLHQLDSWIKNFIWSGDIYTHKVCTVSWKVMCRPWAAGGLDIKPTCLINESLILLLAWQF 347

Query: 185 MTSNSLVYNILRRRFLASDGSPRHSFIPSSIWRGIRPGISGFLEDCRWIPGCNSGVRFWL 364
            T++S    ++  RFL   G+P   +  SS+W GI+  +S    +  WI G  + +  W 
Sbjct: 348 STADSQWAALMHHRFL-KHGTPLQHYFLSSMWGGIKEHLSTISSNSIWIVGTGANINLWT 406

Query: 365 DNWLGYIIADRIGIPEEYRHLFRHRISDYFYDGTWHFTFSFIEAYLDMVRDIVRVPITPA 544
           DNWLG  + D + I       FR  ++D   +G      + +       R    V  T  
Sbjct: 407 DNWLGIRLVDSLNISPTLHTKFRASVADVIVNGALSLPAAALAVPDIASRVACLVLPTAP 466

Query: 545 SSDTRVWLHSDD 580
             D  VWLHS D
Sbjct: 467 LPDALVWLHSSD 478


>ref|XP_002522932.1| conserved hypothetical protein [Ricinus communis]
           gi|223537826|gb|EEF39443.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 303

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 41/92 (44%), Positives = 60/92 (65%)
 Frame = +2

Query: 2   TLLRQMEKAMRNFIWTGDVNSKGSVVVNWSRCCMPRAEGGLGVRSIVVANNAFLMKLGWK 181
           +LL+ +EKA+RNF+WTG V+ K  V V W  CC P +EGG+G++ + V N   L ++ WK
Sbjct: 200 SLLKSIEKAIRNFLWTGSVSYKKLVTVKWGHCCKPISEGGIGLKRLDVLNRTMLCRIAWK 259

Query: 182 IMTSNSLVYNILRRRFLASDGSPRHSFIPSSI 277
             +++S VY  LR R+L + G PR S +  SI
Sbjct: 260 FYSNDSFVYRFLRSRYLVASGVPRSSLVWPSI 291


>gb|EOY06960.1| Uncharacterized protein TCM_021522 [Theobroma cacao]
          Length = 3503

 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 3/221 (1%)
 Frame = +2

Query: 5    LLRQMEKAMRNFIWTGDVNSKGSVVVNWSRCCMPRAEGGLGVRSIVVANNAFLMKLGWKI 184
            +L ++ +   NF+W G  +SK     +W +  +P AEGGL +R++     AF MKL W+ 
Sbjct: 2948 VLERINRLFNNFLWGGSASSKRIHWASWGKIALPIAEGGLDIRNLEDVFKAFSMKLWWRF 3007

Query: 185  MTSNSLVYNILRRRFLASDGSPRH---SFIPSSIWRGIRPGISGFLEDCRWIPGCNSGVR 355
             T+NSL    +R ++      P H       S  W+ +    S   ++ RW  G +  + 
Sbjct: 3008 RTTNSLWMQFMRAKYCGGQ-LPTHVQPKLHDSQTWKRMVTISSITEQNIRWRVG-HGKLF 3065

Query: 356  FWLDNWLGYIIADRIGIPEEYRHLFRHRISDYFYDGTWHFTFSFIEAYLDMVRDIVRVPI 535
            FW D W+G    + + I  +       ++SD+F + +W           ++V +I ++PI
Sbjct: 3066 FWHDCWMG---EEPLVIRNQEFASSMAQVSDFFLNNSWDIEKLKSVLQQEVVEEIAKIPI 3122

Query: 536  TPASSDTRVWLHSDDGCITSKSAYTFLRPRAPTVHWGSWIW 658
              +S+D   W  + +G  ++KSA+   R R       ++IW
Sbjct: 3123 NASSNDRAYWTPTPNGDFSTKSAWQLSRERKVVNPTYNYIW 3163



 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 8/216 (3%)
 Frame = +2

Query: 2    TLLRQMEKAMRNFIWTGDVNSKGSVVVNWSRCCMPRAEGGLGVRSIVVANNAFLMKLGWK 181
            T++ ++E+   +F+W    + K      WS+   P +EGGL +R++     AF +KL W+
Sbjct: 1153 TVIEKIERLFNSFLWGDSCDGKKLHWTAWSKITFPVSEGGLDIRNLRDVFEAFSLKLWWR 1212

Query: 182  IMTSNSLVYNILRRRFLASDGSPRHSFIP----SSIWRGIRPGISGFLEDCRWIPGCNSG 349
              T NSL    LR ++    G   H   P    S +W+ +  G    L++ RW  G    
Sbjct: 1213 FQTCNSLWTRFLRTKYCL--GRIPHLVQPKLHDSQVWKRMIVGRDVALQNIRWRIG-KGE 1269

Query: 350  VRFWLDNWLGYIIADRI--GIPEEYRHLFRHRISDYFYDGTWHFTFSFIEAYL--DMVRD 517
            + FW D W+G      +      +  H+ +      FY+G   +    + +YL   +V +
Sbjct: 1270 LFFWHDCWMGDQPLATLFPSFHNDMSHVHK------FYNGD-EWDIVKLNSYLPTSLVDE 1322

Query: 518  IVRVPITPASSDTRVWLHSDDGCITSKSAYTFLRPR 625
            I+++P   +  D   W  + +G  +  SA+  +R R
Sbjct: 1323 ILQIPFDRSQEDVAYWALTSNGEFSFWSAWEIIRQR 1358


>gb|EOY17513.1| Uncharacterized protein TCM_036737 [Theobroma cacao]
          Length = 2215

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 60/222 (27%), Positives = 110/222 (49%), Gaps = 4/222 (1%)
 Frame = +2

Query: 5    LLRQMEKAMRNFIWTGDVNSKGSVVVNWSRCCMPRAEGGLGVRSIVVANNAFLMKLGWKI 184
            +L ++ + + NF+W G   SK     +W +  +P AEGGL +R++     AF MKL W+ 
Sbjct: 1660 VLERINRLLNNFLWGGSTASKRIHWASWGKIALPIAEGGLDIRNVEDVCEAFSMKLWWRF 1719

Query: 185  MTSNSLVYNILRRRF----LASDGSPRHSFIPSSIWRGIRPGISGFLEDCRWIPGCNSGV 352
             T+NSL    +R ++    L +D  P+     S  W+ +    S   ++ RW  G +  +
Sbjct: 1720 RTTNSLWTQFMRAKYCGGQLPTDVQPK--LHDSQTWKRMVTISSITEQNIRWRIG-HGEL 1776

Query: 353  RFWLDNWLGYIIADRIGIPEEYRHLFRHRISDYFYDGTWHFTFSFIEAYLDMVRDIVRVP 532
             FW D W+G    + +    +       ++SD+F + +W+          ++V +IV++P
Sbjct: 1777 FFWHDCWMG---EEPLVNRNQAFASSMAQVSDFFLNNSWNVEKLKTVLQQEVVEEIVKIP 1833

Query: 533  ITPASSDTRVWLHSDDGCITSKSAYTFLRPRAPTVHWGSWIW 658
            I  +S+D   W  + +G  ++KSA+  +R R       ++IW
Sbjct: 1834 IDTSSNDKAYWTTTPNGDFSTKSAWQLIRNRKVENPVFNFIW 1875


>gb|EOY02239.1| Uncharacterized protein TCM_016763 [Theobroma cacao]
          Length = 2127

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 12/231 (5%)
 Frame = +2

Query: 2    TLLRQMEKAMRNFIWTGDVNSKGSVVVNWSRCCMPRAEGGLGVRSIVVANNAFLMKLGWK 181
            T++ ++++   +F+W      K      W++   P AEGGLG+R +     AF +KL W+
Sbjct: 1573 TVIERIDRLFNSFLWGDSTECKKMHWAEWAKISFPCAEGGLGIRKLEDVCAAFTLKLWWR 1632

Query: 182  IMTSNSLVYNILRRRFLASDGSPRHSFIP----SSIWRGIRPGISGFLEDCRWIPGCNSG 349
              T NSL    LR ++    G   H   P    S +W+ +  G    L++ RW  G    
Sbjct: 1633 FQTGNSLWTQFLRTKYCL--GRIPHHIQPKLHDSHVWKRMISGREMALQNIRWKIG-KGD 1689

Query: 350  VRFWLDNWLGYIIADR---IGIPEEYRHLFRHRISD--YFYDG-TWHF--TFSFIEAYLD 505
            + FW D W+G    D+      PE     F++ +S   +FY+G TW      SF+   L 
Sbjct: 1690 LFFWHDCWMG----DKPLAASFPE-----FQNDMSHGYHFYNGDTWDVDKLRSFLPTIL- 1739

Query: 506  MVRDIVRVPITPASSDTRVWLHSDDGCITSKSAYTFLRPRAPTVHWGSWIW 658
             V +I++VP   +  D   W  + +G  +++SA+  +R R  +    S+IW
Sbjct: 1740 -VEEILQVPFDKSREDVAYWTLTSNGDFSTRSAWEMIRQRQTSNALCSFIW 1789


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 62/237 (26%), Positives = 103/237 (43%), Gaps = 14/237 (5%)
 Frame = +2

Query: 2   TLLRQMEKAMRNFIWTGDVNSKGSVVVNWSRCCMPRAEGGLGVRSIVVANNAFLMKLGWK 181
           ++L ++++  R F+W      K   +V WS+ C P+ EGGLGVR+    N A + K+GW+
Sbjct: 61  SILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWR 120

Query: 182 IM-TSNSLVYNILRRRFLASDGSPRHSFIP----SSIWRGIRPGISGFL-EDCRWIPGCN 343
           ++   NSL   +L++++   +       IP    SS WR I  G+   +     WIPG  
Sbjct: 121 LLQEKNSLWTLVLQKKYHVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDG 180

Query: 344 SGVRFWLDNWLGYIIADRIGIPEEYRHLFRHRISDYFYDGTWHFTFSFIEAYLD----MV 511
             +RFW D W+       +   E           D +  G   + F+ I+ Y      + 
Sbjct: 181 QQIRFWTDRWVSGKPLLELDNGERPTDCDTVVAKDLWIPGR-GWDFAKIDPYTTNNTRLE 239

Query: 512 RDIVRVPITPASSDTRVWLHSDDGCITSKSAYTFLR----PRAPTVHWGSWIWSPHI 670
              V + +   + D   W  S DG  + +SAY  L     PR     + + +W   +
Sbjct: 240 LRAVVLDLVTGARDRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRV 296


>gb|AAM09536.1| reverse transcriptase [Medicago sativa]
          Length = 168

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 45/130 (34%), Positives = 67/130 (51%)
 Frame = +2

Query: 80  VNWSRCCMPRAEGGLGVRSIVVANNAFLMKLGWKIMTSNSLVYNILRRRFLASDGSPRHS 259
           V+WS+ C  +  G L VR     N A L+ L WK++TSN    +I R RFL ++ +P+  
Sbjct: 3   VSWSKVCQSKDTGVLAVRDPAQVNRASLLLLTWKLITSNEQWAHICRVRFL-NNYTPKSH 61

Query: 260 FIPSSIWRGIRPGISGFLEDCRWIPGCNSGVRFWLDNWLGYIIADRIGIPEEYRHLFRHR 439
           +I SS+W G++  I        W  G    +RFW D WL   IA+   IP         +
Sbjct: 62  YITSSVWPGLKSNIQYIFYHSIWTVGNGRNIRFWSDKWLDSPIAEHWNIPPSLISDIELK 121

Query: 440 ISDYFYDGTW 469
           ++D+  +GTW
Sbjct: 122 VNDFIVNGTW 131


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 12/216 (5%)
 Frame = +2

Query: 8    LRQMEKAMRNFIWTGDVNSKGSVVVNWSRCCMPRAEGGLGVRSIVVANNAFLMKLGWKIM 187
            L  +++  R F+W   +  K   +++W + C P+AEGG+G+RS    N A + K+GW+++
Sbjct: 678  LDTLDRYSRTFLWGSTMEKKKQHLLSWRKICKPKAEGGIGLRSARDMNKALVAKVGWRLL 737

Query: 188  -TSNSLVYNILRRRFLASDGSPRHSFIP----SSIWRGIRPGI-SGFLEDCRWIPGCNSG 349
                SL   ++R+++            P    SS WR +  G+    ++   W+PG    
Sbjct: 738  QDKESLWARVVRKKYKVGGVQDTSWLKPQPRWSSTWRSVAVGLREVVVKGVGWVPGDGCT 797

Query: 350  VRFWLDNWLGYIIADRIG---IPEEYRHLFRHRISDYFYDGT-WHFTFSFIEAYLDMVRD 517
            +RFWLD WL       +G   IPE  R       +DY+  G+ W+     +     + R 
Sbjct: 798  IRFWLDRWLLQEPLVELGTDMIPEGERIKV---AADYWLPGSGWNLEILGLYLPETVKRR 854

Query: 518  I--VRVPITPASSDTRVWLHSDDGCITSKSAYTFLR 619
            +  V V +   + D   W  + DG  T +SAY+ L+
Sbjct: 855  LLSVVVQVFLGNGDEISWKGTQDGAFTVRSAYSLLQ 890


>gb|EOY14356.1| Uncharacterized protein TCM_033752 [Theobroma cacao]
          Length = 2251

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 4/222 (1%)
 Frame = +2

Query: 5    LLRQMEKAMRNFIWTGDVNSKGSVVVNWSRCCMPRAEGGLGVRSIVVANNAFLMKLGWKI 184
            +L ++ +   +F+W G   SK     +W++  +P  EGGL +RS+     AF MKL W+ 
Sbjct: 1697 VLERVNRLFNSFLWGGSAASKRIHWASWAKIALPVTEGGLDIRSLAEVFEAFSMKLWWRF 1756

Query: 185  MTSNSLVYNILRRRF----LASDGSPRHSFIPSSIWRGIRPGISGFLEDCRWIPGCNSGV 352
             T++SL    +R ++    L     P+     S  W+ +    +   +  RW  G    V
Sbjct: 1757 RTTDSLWTRFMRMKYCRGQLPMQTQPK--LHDSQTWKRMLTSSTITEQHMRWRVG-QGNV 1813

Query: 353  RFWLDNWLGYIIADRIGIPEEYRHLFRHRISDYFYDGTWHFTFSFIEAYLDMVRDIVRVP 532
             FW D W+G   A  I   +E+      ++ D+F + +W+          ++V +I ++P
Sbjct: 1814 FFWHDCWMGE--APLISSNQEFTSSM-VQVCDFFTNNSWNIEKLKTVLQQEVVDEIAKIP 1870

Query: 533  ITPASSDTRVWLHSDDGCITSKSAYTFLRPRAPTVHWGSWIW 658
            I   + D   W  + +G  ++KSA+  +R R       ++IW
Sbjct: 1871 IDTMNKDEAYWTPTPNGDFSTKSAWQLIRKRKVVNPVFNFIW 1912


>ref|XP_004297900.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 227

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 58/221 (26%), Positives = 91/221 (41%), Gaps = 7/221 (3%)
 Frame = +2

Query: 2   TLLRQMEKAMRNFIWTGDVNSKGSVVVNWSRCCMPRAEGGLGVRSIVVANNAFLMKLGWK 181
           ++   +++  RNF+W      K   +V W   C P+  GGLG++     N A L K GW+
Sbjct: 2   SICNTLDRLNRNFLWGHTEEKKKIHLVKWDTVCKPKCYGGLGLKKSSCVNQALLAKTGWR 61

Query: 182 IMTSN-SLVYNILRRRFLASDGSPRHSFIP----SSIWRGIRPGISGFLEDCRWIPGCNS 346
           ++     L    L +++L  D   + S +P    S+ W+GI  G        +W  G  +
Sbjct: 62  LLQKELGLWAEALNKKYLKDDCIMQKSTLPFSASSNTWKGILYGAQLLPNGVKWRIGPGT 121

Query: 347 GVRFWLDNWLGYIIADRIGIPEEYRHLFRHRISDYFYDGTWHFTF--SFIEAYLDMVRDI 520
            + FW D W        I +     HL   R+ D   DG W       F+   + +    
Sbjct: 122 EISFWNDVWTDLGALSDIALKPIPSHLQSLRVCDVVCDGGWDLRMVKEFLPEDVKLKILS 181

Query: 521 VRVPITPASSDTRVWLHSDDGCITSKSAYTFLRPRAPTVHW 643
           +      +  DT +W  S +G  T KSAY  L   + T  W
Sbjct: 182 MHAGGIRSGDDTTIWKLSHNGKFTVKSAYHSLFLNSETKPW 222


>gb|EOY25454.1| Uncharacterized protein TCM_026877 [Theobroma cacao]
          Length = 2367

 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 57/221 (25%), Positives = 102/221 (46%), Gaps = 3/221 (1%)
 Frame = +2

Query: 5    LLRQMEKAMRNFIWTGDVNSKGSVVVNWSRCCMPRAEGGLGVRSIVVANNAFLMKLGWKI 184
            +L ++ +   +F+W G   SK     +W++  +P  EGGL +RS+     AF MKL W+ 
Sbjct: 1867 VLERINRIFNSFLWGGSAASKKIHWTSWAKISLPVKEGGLDIRSLAEVFEAFSMKLWWRF 1926

Query: 185  MTSNSLVYNILRRRFLASDGSPRHS---FIPSSIWRGIRPGISGFLEDCRWIPGCNSGVR 355
             T++SL    +R ++      P H+      S  W+ +    +   ++ RW  G    + 
Sbjct: 1927 RTTDSLWTRFMRMKYCRGQ-LPMHTQPKLHDSQTWKRMVASSAITEQNMRWRVG-QGNLF 1984

Query: 356  FWLDNWLGYIIADRIGIPEEYRHLFRHRISDYFYDGTWHFTFSFIEAYLDMVRDIVRVPI 535
            FW D W+G      I    E+  L   ++ D+F + +W           ++V +I ++PI
Sbjct: 1985 FWHDCWMGE--TPLISSNHEF-SLSMVQVCDFFMNNSWDIEKLKTVLQQEVVDEIAKIPI 2041

Query: 536  TPASSDTRVWLHSDDGCITSKSAYTFLRPRAPTVHWGSWIW 658
               S D   W  + +G  ++KSA+  +R R       ++IW
Sbjct: 2042 DAMSKDEAYWAPTPNGEFSTKSAWQLIRKREVVNPVFNFIW 2082


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 64/226 (28%), Positives = 96/226 (42%), Gaps = 11/226 (4%)
 Frame = +2

Query: 14   QMEKAMRNFIWTGDVNSKGSVVVNWSRCCMPRAEGGLGVRSIVVANNAFLMKLGWKIMTS 193
            +++K  RNF+W  D N++    VNW+  C PR EGGLG+R     N AFL K+ W+I ++
Sbjct: 821  EIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSN 880

Query: 194  -NSLVYNILRRRFLASDGSPRHSFIPSSI---WRGIRPGISGFLEDCRWIPGCNSGVRFW 361
             + L   +LR +++  +    H    S+    WR I  G        +W  G    + FW
Sbjct: 881  IDKLWVKVLREKYV-KNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFW 939

Query: 362  LDNWLG----YIIADRIGIPEEYRHLFRHRISDYFYDGTWHFTFSFIEAYLDMVRDIVR- 526
             D W+G        D I  P    H+   ++ D         T +        + D+VR 
Sbjct: 940  NDWWVGDGPLASNTDCINQP----HMTDIKVEDLITSQRRWDTGALHNILPTNMIDMVRA 995

Query: 527  --VPITPASSDTRVWLHSDDGCITSKSAYTFLRPRAPTVHWGSWIW 658
              + I     D   W HS  G +T  SAY+ +           WIW
Sbjct: 996  TPIAINSEQEDFLSWPHSTTGMVTVSSAYSLIAGHDGDDRSHDWIW 1041


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 64/226 (28%), Positives = 96/226 (42%), Gaps = 11/226 (4%)
 Frame = +2

Query: 14   QMEKAMRNFIWTGDVNSKGSVVVNWSRCCMPRAEGGLGVRSIVVANNAFLMKLGWKIMTS 193
            +++K  RNF+W  D N++    VNW+  C PR EGGLG+R     N AFL K+ W+I ++
Sbjct: 821  EIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSN 880

Query: 194  -NSLVYNILRRRFLASDGSPRHSFIPSSI---WRGIRPGISGFLEDCRWIPGCNSGVRFW 361
             + L   +LR +++  +    H    S+    WR I  G        +W  G    + FW
Sbjct: 881  IDKLWVKVLREKYV-KNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFW 939

Query: 362  LDNWLG----YIIADRIGIPEEYRHLFRHRISDYFYDGTWHFTFSFIEAYLDMVRDIVR- 526
             D W+G        D I  P    H+   ++ D         T +        + D+VR 
Sbjct: 940  NDWWVGDGPLASNTDCINQP----HMTDIKVEDLITSQRRWDTGALHNILPTNMIDMVRA 995

Query: 527  --VPITPASSDTRVWLHSDDGCITSKSAYTFLRPRAPTVHWGSWIW 658
              + I     D   W HS  G +T  SAY+ +           WIW
Sbjct: 996  TPIAINSEQEDFLSWPHSTTGMVTVSSAYSLIAGHDGDDRSHDWIW 1041


>gb|EOY24339.1| RNA-directed DNA polymerase (Reverse transcriptase),
           Polynucleotidyl transferase, Ribonuclease H fold-like
           protein [Theobroma cacao]
          Length = 616

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
 Frame = +2

Query: 11  RQMEKAMRNFIWTGDVNSKGSVVVNWSRCCMPRAEGGLGVRSIVVANNAFLMKLGWKIMT 190
           ++ME+  +NF+W GD + K   ++  ++ C P+ E  LGV+ + V NNAFLMKL W+++T
Sbjct: 117 KRMERYCQNFLWGGDADHKRIHLIRCNQICRPKEERSLGVKRLHVMNNAFLMKLLWQLVT 176

Query: 191 -SNSLVYNILRRRF---LASDGSPRHSFIPSSIWRGIRPGISGFLEDCRWIPGCNSGVRF 358
              SL  +I+R ++   +    S  +    S  W  +    + F  + RW+ G    +RF
Sbjct: 177 RPKSLWVSIIRGKYNFNMDRRSSSIYCHGASHTWNALSKLWNVFNNNLRWVLGDGLSIRF 236

Query: 359 WLDNWLGYIIADRIGIPEEYRHLFRHRISDYFYD-GTWHFTFSFIEAYLDMVRDIVRV-- 529
           W D WL        G            + ++  D G W+        + D+V  I+    
Sbjct: 237 WKDIWLEDTPLLEQGHTLNIVTSENCCVREFLLDTGEWNHEKLATCLHSDLVNKILMFLP 296

Query: 530 PITPASSDTRVWLHSDDGCITSKSAYTFLRPRAP 631
           P+     DT  W  S  G  T  S Y  LR   P
Sbjct: 297 PLLSFKPDTPYWASSASGVCTVASTYEVLREDYP 330


>gb|EOY02234.1| Uncharacterized protein TCM_011921 [Theobroma cacao]
          Length = 926

 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 10/228 (4%)
 Frame = +2

Query: 5    LLRQMEKAMRNFIWTGDVNSKGSVVVNWSRCCMPRAEGGLGVRSIVVANNAFLMKLGWKI 184
            ++ ++E+   +F+W      K      W++   P +EGGL +R++    +AF +KL W+ 
Sbjct: 373  VIEKIERLFNSFLWGDSNEGKRMHWAAWNKITFPSSEGGLDIRNLKDVFDAFTLKLWWRF 432

Query: 185  MTSNSLVYNILRRRFLASDGSPRHSFIP----SSIWRGIRPGISGFLEDCRWIPGCNSGV 352
             T +SL  + L+ ++    G   H   P    SSIW+ I  G    +++ RW  G    +
Sbjct: 433  YTCDSLWTHFLKTKYCL--GRIPHYVQPKLHNSSIWKRITGGRDVTIQNTRWKIG-RGEL 489

Query: 353  RFWLDNWLGYIIADR---IGIPEEYRHLFRHRIS--DYFYDG-TWHFTFSFIEAYLDMVR 514
             FW D W+G    D+   I  P      FR+ +S    FY G +W      +   +++V 
Sbjct: 490  FFWHDCWMG----DQPLVISFPS-----FRNDMSLVHKFYKGDSWDVDKLRLFLPVNLVD 540

Query: 515  DIVRVPITPASSDTRVWLHSDDGCITSKSAYTFLRPRAPTVHWGSWIW 658
            +I+ +P      D   W+ + +G  +++SA+  +R R P    GS IW
Sbjct: 541  EILLIPFDRTQQDVAYWILTSNGEFSTRSAWETIRKRQPHNTLGSLIW 588


>gb|EOY17514.1| Uncharacterized protein TCM_042330 [Theobroma cacao]
          Length = 2249

 Score = 82.8 bits (203), Expect = 9e-14
 Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 3/221 (1%)
 Frame = +2

Query: 5    LLRQMEKAMRNFIWTGDVNSKGSVVVNWSRCCMPRAEGGLGVRSIVVANNAFLMKLGWKI 184
            +L ++ +   +F+W G   SK     +W++  +P  EGGL +R++     AF MKL W+ 
Sbjct: 1695 VLERVNRIFNSFLWGGSAASKKIHWASWAKISLPIKEGGLDIRNLAEVFEAFSMKLWWRF 1754

Query: 185  MTSNSLVYNILRRRFLASDGSPRHS---FIPSSIWRGIRPGISGFLEDCRWIPGCNSGVR 355
             T +SL    +R ++      P H+      S  W+ +    +   ++ RW  G    + 
Sbjct: 1755 RTIDSLWTRFMRMKYCRGQ-LPMHTQPKLHDSQTWKRMVANSAITEQNMRWRVG-QGKLF 1812

Query: 356  FWLDNWLGYIIADRIGIPEEYRHLFRHRISDYFYDGTWHFTFSFIEAYLDMVRDIVRVPI 535
            FW D W+G      +    +   L   ++ D+F + +W           ++V +I ++PI
Sbjct: 1813 FWHDCWMG---ETPLTSSNQELSLSMVQVCDFFMNNSWDIEKLKTVLQQEVVDEIAKIPI 1869

Query: 536  TPASSDTRVWLHSDDGCITSKSAYTFLRPRAPTVHWGSWIW 658
               S D   W  + +G  ++KSA+  +R R       ++IW
Sbjct: 1870 DAMSKDEAYWAPTPNGEFSTKSAWQLIRKREVVNPVFNFIW 1910