BLASTX nr result
ID: Rehmannia26_contig00012620
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00012620
(2286 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transc... 879 0.0
ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transc... 870 0.0
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc... 823 0.0
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera] 754 0.0
ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citr... 707 0.0
ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transc... 702 0.0
gb|EOY33211.1| BSD domain (BTF2-like transcription factors, Syna... 683 0.0
ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [A... 676 0.0
ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citr... 672 0.0
ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Caps... 670 0.0
ref|NP_175971.3| probable RNA polymerase II transcription factor... 664 0.0
ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arab... 663 0.0
ref|XP_002310512.2| transcription factor-related family protein ... 659 0.0
ref|XP_002530618.1| TFIIH basal transcription factor complex sub... 659 0.0
ref|XP_006392607.1| hypothetical protein EUTSA_v10011333mg [Eutr... 648 0.0
gb|ESW16172.1| hypothetical protein PHAVU_007G134900g [Phaseolus... 643 0.0
ref|XP_004496077.1| PREDICTED: probable RNA polymerase II transc... 642 0.0
ref|XP_006589332.1| PREDICTED: probable RNA polymerase II transc... 640 0.0
ref|XP_002307021.1| transcription factor-related family protein ... 634 e-179
gb|EMJ24087.1| hypothetical protein PRUPE_ppa003591mg [Prunus pe... 634 e-179
>ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1-like [Solanum tuberosum]
Length = 599
Score = 879 bits (2270), Expect = 0.0
Identities = 442/600 (73%), Positives = 504/600 (84%)
Frame = +2
Query: 320 MADKQVVKRAKYKSSVKDPGVAGVLKLNIERFVFMPNDPKSTTKLNVDFKKIKGHKFTKE 499
MAD ++VKRAKYK+SVK PGV GVLKL ERF FMPNDP TTKLNV+FK IKGHK +KE
Sbjct: 1 MADGKLVKRAKYKTSVKVPGVPGVLKLTKERFYFMPNDPTLTTKLNVEFKLIKGHKSSKE 60
Query: 500 GSSKQALLNLTQDQGGNFIFEFDSFADRDVCREYVANAIAFHAEAGRAMPEASVAPLNNE 679
SSKQALLNLTQ QGGN++FEFDSF DRD CR++VA+AIA E G+A E P ++E
Sbjct: 61 CSSKQALLNLTQAQGGNYLFEFDSFPDRDQCRDFVASAIAACGEIGKATSEKPAVP-HDE 119
Query: 680 QLSRAETERRIKLLQENSELQKLHKQFVFGNILTDAEFWATRKKLLDKNDSRTPKQRLAL 859
QLS E RRIKLLQENSELQKLH+Q V G IL++AEFWA RKKLL++++++ PKQR+AL
Sbjct: 120 QLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSENKKPKQRVAL 179
Query: 860 KNEMWTVKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLSFVPNKMSEKEFWTKYSR 1039
KN+MW+VKPLSDGQ+NRVTFNLTPE+IHQIFAEKPAVRQAYL FVP KMSEKEFWTKYSR
Sbjct: 180 KNDMWSVKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLKFVPGKMSEKEFWTKYSR 239
Query: 1040 AEYLHSTRNVVXXXXXXXXXXXXXVFLKRDDMLASEARRKIRRVDPTVDMEADKGDDYIH 1219
AEYLHST+N+V VFLK+DDML SEARRKIRRVDPT+DMEAD+GDDY+H
Sbjct: 240 AEYLHSTKNIVAAAAEAAEDEELAVFLKQDDMLVSEARRKIRRVDPTLDMEADEGDDYMH 299
Query: 1220 LPDHGLPNDEVKDVLEAHYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALSRS 1399
LPDHGLP E K++LE YEP++RSFSQ LNQHAAVVL+GRV+DVELGDTRSVAEA +R+
Sbjct: 300 LPDHGLPQGETKEILEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRT 359
Query: 1400 KQAELSNEISNRNLERELSDRISKMAEIEDLQGPQDPAVAPLSIKDPRDYFDSQQANALK 1579
QAE + E+S+ N RE ++S++AEIEDLQGPQDP VA LSIKDPRDYFDSQQANA+K
Sbjct: 360 YQAEQATEVSDENAYRERVKKVSRVAEIEDLQGPQDPPVALLSIKDPRDYFDSQQANAIK 419
Query: 1580 ALGDTGSGAKPLKSSVSSHEAYGSLRDLISDIRGTGLSEPIMNQEVALKVLGSLTQNISS 1759
ALGD +G + LK SVS EA+ SL+D IS+I GL EPI++ EVALKV L+QNISS
Sbjct: 420 ALGDAETGIRQLKFSVSKEEAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISS 479
Query: 1760 TKFNLGNNPHESVLDGLPKVTKEELLHHWTSVQELLKHFWSSYPITTKYLYTKVTRLKDA 1939
TK+ LG NPHESVLD LP TK ELL HWTS+QELLKHFWSSYPITTKY Y KVTRLKDA
Sbjct: 480 TKYYLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYAKVTRLKDA 539
Query: 1940 MSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSAKSGERPNGFV 2119
MSQ+YPKLQEIKESVQSD RHQVSLLV PMLQALDAAFAHYDAD+Q+RSAKSGERPNGFV
Sbjct: 540 MSQIYPKLQEIKESVQSDVRHQVSLLVQPMLQALDAAFAHYDADIQKRSAKSGERPNGFV 599
>ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1-like [Solanum lycopersicum]
Length = 599
Score = 870 bits (2248), Expect = 0.0
Identities = 437/600 (72%), Positives = 501/600 (83%)
Frame = +2
Query: 320 MADKQVVKRAKYKSSVKDPGVAGVLKLNIERFVFMPNDPKSTTKLNVDFKKIKGHKFTKE 499
MAD +VVKRAKYK+SVK PGV GVLKL ERF FMPNDP TTKLNV+FK IKGHK +KE
Sbjct: 1 MADGKVVKRAKYKTSVKVPGVPGVLKLTKERFYFMPNDPTLTTKLNVEFKLIKGHKSSKE 60
Query: 500 GSSKQALLNLTQDQGGNFIFEFDSFADRDVCREYVANAIAFHAEAGRAMPEASVAPLNNE 679
SSKQALLNLTQ QGGN++FEFDSF DRD CR++VA+AIA E G+A E P ++E
Sbjct: 61 CSSKQALLNLTQAQGGNYLFEFDSFPDRDQCRDFVASAIAACGEIGKATSEKPAVP-HDE 119
Query: 680 QLSRAETERRIKLLQENSELQKLHKQFVFGNILTDAEFWATRKKLLDKNDSRTPKQRLAL 859
QLS E RRIKLLQENSELQ LH++ V IL++ EFWA RKKLL++++++ PKQR+AL
Sbjct: 120 QLSATEMGRRIKLLQENSELQNLHRELVIAGILSETEFWAARKKLLEQSENKKPKQRVAL 179
Query: 860 KNEMWTVKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLSFVPNKMSEKEFWTKYSR 1039
KN+MW+VKPLSDGQ+NRVTFNLTPE+IHQIFAEKPAVRQAYL FVP KMSEKEFWTKYSR
Sbjct: 180 KNDMWSVKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLKFVPGKMSEKEFWTKYSR 239
Query: 1040 AEYLHSTRNVVXXXXXXXXXXXXXVFLKRDDMLASEARRKIRRVDPTVDMEADKGDDYIH 1219
AEYLHST+N+V VFLK+DDML SEARRKIRRVDPT+DMEAD+GDDY+H
Sbjct: 240 AEYLHSTKNIVAAAAEAAEDEELAVFLKQDDMLVSEARRKIRRVDPTLDMEADEGDDYMH 299
Query: 1220 LPDHGLPNDEVKDVLEAHYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALSRS 1399
LPDHGLP E K++LE YEP++RSFSQ LNQHAAVVLQGRV+DVELGDTRSVAEA +R+
Sbjct: 300 LPDHGLPQGETKEILEPQYEPFKRSFSQYLNQHAAVVLQGRVIDVELGDTRSVAEAFTRT 359
Query: 1400 KQAELSNEISNRNLERELSDRISKMAEIEDLQGPQDPAVAPLSIKDPRDYFDSQQANALK 1579
QAE + E+S+ N RE ++S++AEIEDLQGP+DP VA LSIKDPRDYFDSQQANA+K
Sbjct: 360 NQAEQATEVSDENAYRERVKKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIK 419
Query: 1580 ALGDTGSGAKPLKSSVSSHEAYGSLRDLISDIRGTGLSEPIMNQEVALKVLGSLTQNISS 1759
ALGD +G + LK VS EA+ SL+D IS+I GL EPI++ EVALKV L+QNISS
Sbjct: 420 ALGDAETGIRQLKFRVSKEEAFCSLKDSISEINSQGLIEPIISPEVALKVFNLLSQNISS 479
Query: 1760 TKFNLGNNPHESVLDGLPKVTKEELLHHWTSVQELLKHFWSSYPITTKYLYTKVTRLKDA 1939
TK++LG NPHESVLD LP TK ELL HWTS+QELLKHFWSSYPITTKY Y KVTRLKDA
Sbjct: 480 TKYHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYAKVTRLKDA 539
Query: 1940 MSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSAKSGERPNGFV 2119
MSQ+YPKLQEIKESVQSD RHQVSLLV PMLQALDAAFAHYDAD+Q+RSA+SGERPNGFV
Sbjct: 540 MSQIYPKLQEIKESVQSDVRHQVSLLVQPMLQALDAAFAHYDADLQKRSARSGERPNGFV 599
>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 [Vitis vinifera] gi|296090002|emb|CBI39821.3| unnamed
protein product [Vitis vinifera]
Length = 602
Score = 823 bits (2126), Expect = 0.0
Identities = 412/599 (68%), Positives = 496/599 (82%), Gaps = 3/599 (0%)
Frame = +2
Query: 332 QVVKRAKYKSSVKDPGVAGVLKLNIERFVFMPNDPKSTTKLNVDFKKIKGHKFTKEGSSK 511
+V+KRA+YK+SVKD GVAGVLK+ ++FVFMPNDP S+ + +V+F+ IKGHKF+K GS+K
Sbjct: 4 EVLKRARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGSNK 63
Query: 512 QALLNLTQD--QGGNFIFEFDSFADRDVCREYVANAIAFHAEAGRAMPEASVAPLNNEQL 685
ALLNLTQD +GG +IFEF+++ DR+VCRE+V A+A +EA +A E S L +EQL
Sbjct: 64 PALLNLTQDSEKGGGYIFEFENYPDREVCREFVGRALAKFSEASKAGSEQSAVKLFDEQL 123
Query: 686 SRAETERRIKLLQENSELQKLHKQFVFGNILTDAEFWATRKKLLDKNDSRTPKQRLALKN 865
S E ERRIKLL+E+SELQKLHKQFV +LT+AEFWATRKKLLD N SRT KQR+ K+
Sbjct: 124 STIEMERRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVGFKS 183
Query: 866 EMWT-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLSFVPNKMSEKEFWTKYSRA 1042
M + +KPL+DG++NRVTFNLTPEIIHQIFAEKPAV QA+L+FVPNKM+EK+FW KY RA
Sbjct: 184 AMISDLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRA 243
Query: 1043 EYLHSTRNVVXXXXXXXXXXXXXVFLKRDDMLASEARRKIRRVDPTVDMEADKGDDYIHL 1222
EYLH TRN V VFLK DD+LA+EARRKIRRVDPT+DMEAD+GDDY+HL
Sbjct: 244 EYLHCTRNTVAAAAEAAEDEELAVFLKHDDILANEARRKIRRVDPTLDMEADQGDDYMHL 303
Query: 1223 PDHGLPNDEVKDVLEAHYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALSRSK 1402
PDHG+ D K++++ YE YRR+ SQDLN+HAAVVL+GR +DVEL DTR+VAEAL++SK
Sbjct: 304 PDHGIFRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSK 363
Query: 1403 QAELSNEISNRNLERELSDRISKMAEIEDLQGPQDPAVAPLSIKDPRDYFDSQQANALKA 1582
+ E +NE S+ ++ RE +RIS+M EIEDLQ P+D A L IKDPRDYFDSQQANALK
Sbjct: 364 RVEAANEKSDGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKT 423
Query: 1583 LGDTGSGAKPLKSSVSSHEAYGSLRDLISDIRGTGLSEPIMNQEVALKVLGSLTQNISST 1762
LGDT +G+K +K S+S+ EAYGSLR IS+I+ GLS+PI+ ++ALKVL LTQNISST
Sbjct: 424 LGDTLAGSKQIKCSLSTQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISST 483
Query: 1763 KFNLGNNPHESVLDGLPKVTKEELLHHWTSVQELLKHFWSSYPITTKYLYTKVTRLKDAM 1942
KF+LG NP ESVLD LP +TKEELLHHWTS+QELL+HFWSSYPITT YLYTK +RLKDAM
Sbjct: 484 KFHLGKNPQESVLDRLPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAM 543
Query: 1943 SQVYPKLQEIKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSAKSGERPNGFV 2119
SQ+YPKLQEIKESVQSDFRHQVSLLV PMLQALDAAFAHYDAD Q+RSA+SGERPNGFV
Sbjct: 544 SQIYPKLQEIKESVQSDFRHQVSLLVQPMLQALDAAFAHYDADQQKRSARSGERPNGFV 602
>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
Length = 735
Score = 754 bits (1947), Expect = 0.0
Identities = 394/640 (61%), Positives = 478/640 (74%), Gaps = 46/640 (7%)
Frame = +2
Query: 332 QVVKRAKYKSSVKDPGVAGVLKLNIERFVFMPNDPKSTTKLNVDFKKIKGHKFTKEGSSK 511
+V+KRA+YK+SVKD GVAGVLK+ ++FVFMPNDP S+ + +V+F+ IKGHKF+K GS+K
Sbjct: 4 EVLKRARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGSNK 63
Query: 512 QALLNLTQD--QGGNFIFEFDSFADRDVCREYVANAIAFHAEAGRAMPEASVAPLNNEQL 685
ALLNLTQD +GG +IFEF+++ DR+VCRE+V A+A +EA +A E S L +EQL
Sbjct: 64 PALLNLTQDSEKGGGYIFEFENYPDREVCREFVGKALAKFSEASKAGSEQSAVKLFDEQL 123
Query: 686 SRAETERRIKLLQEN-------------------------------------------SE 736
S E ERRIKLL+E+ SE
Sbjct: 124 STIEMERRIKLLREDRHSVPEEKFGVLLLKGILPLFGETIIAMKLIDSGIASKVKWDCSE 183
Query: 737 LQKLHKQFVFGNILTDAEFWATRKKLLDKNDSRTPKQRLALKNEMWT-VKPLSDGQSNRV 913
LQKLHKQFV +LT+AEFWATRKKLLD N SRT KQR+ K+ M + +KPL+DG++NRV
Sbjct: 184 LQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVGFKSAMISDLKPLTDGRTNRV 243
Query: 914 TFNLTPEIIHQIFAEKPAVRQAYLSFVPNKMSEKEFWTKYSRAEYLHSTRNVVXXXXXXX 1093
TFNLTPEIIHQIFAEKPAV QA+L+FVPNKM+EK+FW KY RAEYLH TRN V
Sbjct: 244 TFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHCTRNTVAAAAEAA 303
Query: 1094 XXXXXXVFLKRDDMLASEARRKIRRVDPTVDMEADKGDDYIHLPDHGLPNDEVKDVLEAH 1273
VFLK DD+LASEARRKIRRVDPT+DMEAD+GDDY+HLPDHG+ D K++++
Sbjct: 304 EDEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYMHLPDHGIFRDGSKEIIDPQ 363
Query: 1274 YEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALSRSKQAELSNEISNRNLEREL 1453
YE YRR+ SQDLN+HAAVVL+GR +DVEL DTR+VAEAL++SK+ E +NE S+ ++ RE
Sbjct: 364 YEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAANEKSDGSVTRER 423
Query: 1454 SDRISKMAEIEDLQGPQDPAVAPLSIKDPRDYFDSQQANALKALGDTGSGAKPLKSSVSS 1633
+RIS+M EIEDLQ P+D A L IKDPRDYFDSQQANALK LGDT +G+K +K S+SS
Sbjct: 424 LERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKTLGDTLAGSKQIKCSLSS 483
Query: 1634 HEAYGSLRDLISDIRGTGLSEPIMNQEVALKVLGSLTQNISSTKFNLGNNPHESVLDGLP 1813
EAYGSLR IS+I+ GLS+PI+ ++ALKVL LTQNISSTKF+LG NP ESVLD LP
Sbjct: 484 QEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKNPQESVLDRLP 543
Query: 1814 KVTKEELLHHWTSVQELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSD 1993
+TKEELLHHWTS+QELL+HFWSSYPITT YLYTK +RLKDAMSQ+YPKLQEIKESVQSD
Sbjct: 544 IITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMSQIYPKLQEIKESVQSD 603
Query: 1994 FRHQVSLLVHPMLQALDAAFAHYDADVQRRSAKSGERPNG 2113
FRHQVSLLV PMLQ + +RR ++ E P G
Sbjct: 604 FRHQVSLLVQPMLQ------RRRETLKRRRRSEPQEGPGG 637
>ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
gi|557555943|gb|ESR65957.1| hypothetical protein
CICLE_v10007802mg [Citrus clementina]
Length = 597
Score = 707 bits (1825), Expect = 0.0
Identities = 363/598 (60%), Positives = 453/598 (75%), Gaps = 2/598 (0%)
Frame = +2
Query: 332 QVVKRAKYKSSVKDPGVAGVLKLNIERFVFMPNDPKSTTKLNVDFKKIKGHKFTKEGSSK 511
QV KRAKYK SVKDPG G L++N ++ +FMP++ S KL V+FK I+GHK+TKEGS+K
Sbjct: 6 QVTKRAKYKISVKDPGTTGALRMNDQKLMFMPDNRNSGAKLVVEFKSIQGHKYTKEGSNK 65
Query: 512 QALLNLTQDQGGNFIFEFDSFADRDVCREYVANAIAFHAEAGRAMPEASVAPLNNEQLSR 691
L+NL QGG++IFEFDS++D VCR++V+ + E A E S L +EQLS
Sbjct: 66 PPLINLANAQGGSYIFEFDSYSDLHVCRDFVSKVLEKSKETPNAALEKSAVKLPDEQLSE 125
Query: 692 AETERRIKLLQENSELQKLHKQFVFGNILTDAEFWATRKKLLDKNDSRTPKQRLALKNEM 871
E + RIKLLQENSELQKLH+QFV GNILT+AEFWA RKKLLD++ S+ KQR+ K+ M
Sbjct: 126 EEMQLRIKLLQENSELQKLHRQFVGGNILTEAEFWAARKKLLDRDPSKKSKQRVGFKSAM 185
Query: 872 WT-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLSFVPNKMSEKEFWTKYSRAEY 1048
+ ++P +DG++N+VTF+LTPEII QIFAEKPAV +A+L+FVPNKM+E EFWTKY RAEY
Sbjct: 186 ISDIRPATDGRTNKVTFSLTPEIILQIFAEKPAVHRAFLNFVPNKMTEMEFWTKYCRAEY 245
Query: 1049 LHSTRNVVXXXXXXXXXXXXXVFLKRDDMLASEARRKIRRVDPTVDMEADKGDDYIHLPD 1228
L T+N VFLK DD+LA+E R+KIRRVDPT+DMEAD+GDDY HLPD
Sbjct: 246 LSRTKNYHAVVAEAAEDEELAVFLKEDDILANEVRKKIRRVDPTLDMEADEGDDYTHLPD 305
Query: 1229 HGLPNDEVKDVLEAHYEPYRRSFSQDLNQHAAVVLQGRVVDVELGD-TRSVAEALSRSKQ 1405
HG+ D K+ E E YRR+ QDLN+HAAVVL+GR +DVE D TR++AEAL+RSK+
Sbjct: 306 HGIFRDGTKESNELQSEHYRRTLLQDLNRHAAVVLEGRTIDVEREDSTRALAEALARSKR 365
Query: 1406 AELSNEISNRNLERELSDRISKMAEIEDLQGPQDPAVAPLSIKDPRDYFDSQQANALKAL 1585
NE ++ N E DR ++AEIEDLQ P +APLSIKD R+YFDSQQAN LKA
Sbjct: 366 G---NEGADNNANEERLDRTPRVAEIEDLQAPHCLPLAPLSIKDAREYFDSQQANTLKAS 422
Query: 1586 GDTGSGAKPLKSSVSSHEAYGSLRDLISDIRGTGLSEPIMNQEVALKVLGSLTQNISSTK 1765
D+ + +K S+S EAYGS+RD IS+I+ GLS+PI+N EVALKV LT NISS K
Sbjct: 423 RDSQAS---MKCSLSRQEAYGSVRDAISEIKDMGLSDPIVNPEVALKVYSGLTHNISSIK 479
Query: 1766 FNLGNNPHESVLDGLPKVTKEELLHHWTSVQELLKHFWSSYPITTKYLYTKVTRLKDAMS 1945
++LG NP E+VLD LP TKE+LL+HW S+QELLKHFWSSYPITT YLY+KV RLKDA+S
Sbjct: 480 YHLGKNPRETVLDRLPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLKDALS 539
Query: 1946 QVYPKLQEIKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSAKSGERPNGFV 2119
+YP+L+E+KES+ +D RHQVSLLV PM QALDAA HYDAD+Q+RSAKSGE+PNG+V
Sbjct: 540 NIYPQLEEMKESLPADLRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSGEKPNGYV 597
>ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1-like [Citrus sinensis]
Length = 597
Score = 702 bits (1812), Expect = 0.0
Identities = 362/598 (60%), Positives = 450/598 (75%), Gaps = 2/598 (0%)
Frame = +2
Query: 332 QVVKRAKYKSSVKDPGVAGVLKLNIERFVFMPNDPKSTTKLNVDFKKIKGHKFTKEGSSK 511
QV KRAKYK SVKDPG G L++N ++ +FMP++ S KL V+FK I+GHK+TKEGS+K
Sbjct: 6 QVTKRAKYKISVKDPGTPGALRMNDQKLMFMPDNRNSGAKLVVEFKSIQGHKYTKEGSNK 65
Query: 512 QALLNLTQDQGGNFIFEFDSFADRDVCREYVANAIAFHAEAGRAMPEASVAPLNNEQLSR 691
L+NL QGG++IFEFDS+AD VCR++V+ + E A E S L +EQLS
Sbjct: 66 PPLINLANAQGGSYIFEFDSYADLHVCRDFVSKVLEKSKETPNAALEKSAIKLPDEQLSE 125
Query: 692 AETERRIKLLQENSELQKLHKQFVFGNILTDAEFWATRKKLLDKNDSRTPKQRLALKNEM 871
E + RIKLLQENSELQKLH+QFV GNILT+AEFWA RKKLLD + S+ KQR+ K+ M
Sbjct: 126 EEMQLRIKLLQENSELQKLHRQFVGGNILTEAEFWAARKKLLDIDPSKKSKQRVGFKSAM 185
Query: 872 WT-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLSFVPNKMSEKEFWTKYSRAEY 1048
+ ++P +DG++N+VTF+LTPEII QIFAEKPAV +A+L+FVPNKM+E EFWTKY RAEY
Sbjct: 186 ISDIRPATDGRTNKVTFSLTPEIILQIFAEKPAVHRAFLNFVPNKMTEMEFWTKYCRAEY 245
Query: 1049 LHSTRNVVXXXXXXXXXXXXXVFLKRDDMLASEARRKIRRVDPTVDMEADKGDDYIHLPD 1228
L T+N VFLK DD+LA+E R+KIRRVDPT+DMEAD+GDDY HLPD
Sbjct: 246 LSRTKNYHAVVAEAAEDEELAVFLKEDDILANEVRKKIRRVDPTLDMEADEGDDYTHLPD 305
Query: 1229 HGLPNDEVKDVLEAHYEPYRRSFSQDLNQHAAVVLQGRVVDVELGD-TRSVAEALSRSKQ 1405
HG+ D K+ E E YRR+ QDLN+HAAVVL+GR +DVE D TR++AEAL+RSK+
Sbjct: 306 HGIFRDGTKESNELQSEHYRRTLLQDLNRHAAVVLEGRTIDVEREDSTRALAEALARSKR 365
Query: 1406 AELSNEISNRNLERELSDRISKMAEIEDLQGPQDPAVAPLSIKDPRDYFDSQQANALKAL 1585
NE ++ N E DR ++AEIEDLQ P +APLSIKD R+YFDSQQAN LKA
Sbjct: 366 G---NEGADNNANEERLDRTPRVAEIEDLQAPHCLPLAPLSIKDAREYFDSQQANTLKAS 422
Query: 1586 GDTGSGAKPLKSSVSSHEAYGSLRDLISDIRGTGLSEPIMNQEVALKVLGSLTQNISSTK 1765
D + +K S+S EAY S+RD IS+I+ GLS+PI+N EVALKV LT NISS K
Sbjct: 423 RDAQAS---MKCSLSKQEAYRSVRDAISEIKDMGLSDPIVNPEVALKVYSGLTHNISSIK 479
Query: 1766 FNLGNNPHESVLDGLPKVTKEELLHHWTSVQELLKHFWSSYPITTKYLYTKVTRLKDAMS 1945
++LG NP E+VLD LP TKE+LL+HW S+QELLKHFWSSYPITT YLY+KV RLKDA+S
Sbjct: 480 YHLGKNPRETVLDRLPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLKDALS 539
Query: 1946 QVYPKLQEIKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSAKSGERPNGFV 2119
+YP+L+E+KES+ +D RHQVSLLV PM QALDAA HYDAD+Q+RSAKSGE+PNG++
Sbjct: 540 NIYPQLEEMKESLPADLRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSGEKPNGYI 597
>gb|EOY33211.1| BSD domain (BTF2-like transcription factors, Synapse-associated
proteins and DOS2-like proteins), putative isoform 1
[Theobroma cacao]
Length = 646
Score = 683 bits (1763), Expect = 0.0
Identities = 360/649 (55%), Positives = 450/649 (69%), Gaps = 50/649 (7%)
Frame = +2
Query: 320 MADKQVVKRAKYKSSVKDPGVAGVLKLNIERFVFMPNDPKSTTKLNVDFKKIKGHKFTKE 499
MA V KRAKYK+++KDPG G L++ +E+ +F+P++PKS KL+V+F+ IKG K TKE
Sbjct: 1 MASGHVTKRAKYKTTIKDPGTPGTLRMTLEKILFVPHNPKSAGKLDVEFRFIKGQKHTKE 60
Query: 500 GSSKQALLNLTQDQGGNFIFEFDSFADRDVCREYVANAIAFHAEAGRAMPEASVAPLNNE 679
GSSK LNLT +Q G+FIFEF++++D CR++V +A E E +E
Sbjct: 61 GSSKPPWLNLTNNQNGSFIFEFENYSDLQDCRDFVGKVLAKSGEVS----EKPTVTYPDE 116
Query: 680 QLSRAETERRIKLLQENSELQKLHKQFVFGNILTDAEFWATRKKLLDKNDSRTPKQRLAL 859
QLS AE E RIKLL+E+SELQKLHKQFV +LT+AEFWATRKKLLD+ ++ KQRL
Sbjct: 117 QLSAAEMELRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDREANKKTKQRLGF 176
Query: 860 KNEMWT-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLSFVPNKMSEKEFWTKYS 1036
K+ M + +KP +DG++N+VTFNLTPEII QIFAEKPAV +A+L++VPNKMSE++FWTKY
Sbjct: 177 KSAMISDIKPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYF 236
Query: 1037 RAEYLHSTRNVVXXXXXXXXXXXXXVFLKRDDMLASEARRKIRRVDPTVDMEADKGDDYI 1216
RAEYLHST+N V VFLK+DD+LASE+R KIRRVDPT+DM+AD+GDDY
Sbjct: 237 RAEYLHSTKNSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYT 296
Query: 1217 HLPDHGLPNDEVKDVLEAHYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALSR 1396
HLPDHG+ D K+V E+ E YRR+ SQD+N+HAAVVL+GR VDVEL DTRSVAEAL+R
Sbjct: 297 HLPDHGIFRDGSKEVTESENELYRRTLSQDINRHAAVVLEGRAVDVELEDTRSVAEALAR 356
Query: 1397 SKQAELSNEISNRNLERELSDRISKMAEIEDLQGPQDPAVAPLSIKDPRDYFDSQQANAL 1576
SKQ + S + RE DR+S+M EIEDLQ P + +APL IKDPRDYFDSQQ NAL
Sbjct: 357 SKQESSTKGESYGDTSRERLDRVSRMTEIEDLQAPNNLPLAPLCIKDPRDYFDSQQVNAL 416
Query: 1577 KALGDTGSGAKPLKSSVSSHEAYGSLRDLISDIRGTGLSEPIMNQEVALKVLGSLTQNIS 1756
+ GD +G + +K S+SS E YGSLR+ IS I+ GL +PI+ EVA +V +LTQ+IS
Sbjct: 417 RTSGDELAGTEQIKCSLSSQEVYGSLRESISVIKAMGLKDPIVKPEVAHQVFDALTQSIS 476
Query: 1757 STKFNLGNNPHESVLDGLPKVTKEELLHHWTSVQELLKHFWSSYPITTKYLYTKVTRLKD 1936
+TK+N+G NP ESVLD LPK KEELLHHWTS+ ELL+HFW+SYPITT YLYTKV
Sbjct: 477 TTKYNIGKNPQESVLDRLPKKIKEELLHHWTSILELLRHFWASYPITTSYLYTKVNAALV 536
Query: 1937 AMSQVYPKLQ-------------------------------------------------E 1969
Y KL+ E
Sbjct: 537 LTLLSYQKLEAGKQTEGCHVTYLSTARVVLSNYPQVPFISSLLFYLLGSSDAKASYVWME 596
Query: 1970 IKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSAKSGERPNGF 2116
IK SV SD RHQVSLL+ PM QALDAA HY+AD+Q+RSA+SGERPNG+
Sbjct: 597 IKGSVPSDLRHQVSLLIRPMHQALDAAIQHYEADMQKRSARSGERPNGY 645
>ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
gi|548861733|gb|ERN19104.1| hypothetical protein
AMTR_s00061p00135540 [Amborella trichopoda]
Length = 626
Score = 676 bits (1743), Expect = 0.0
Identities = 350/594 (58%), Positives = 438/594 (73%), Gaps = 7/594 (1%)
Frame = +2
Query: 335 VVKRAKYKSS-VKDPGVAGVLKLNIERFVFMPNDPKSTTKLNVDFKKIKGHKFTKEGSSK 511
V RAKYK+S KDPGVAGVL + + F+F PNDP S+ KL+V F+ IKGHKF+KEGS K
Sbjct: 6 VTMRAKYKASGPKDPGVAGVLTMRDDSFIFRPNDPSSSVKLDVSFRCIKGHKFSKEGS-K 64
Query: 512 QALLNLTQDQGGNFIFEFDSFADRDVCREYVANAIAFHAEAGRAMPEASVAPL-----NN 676
QALLNLTQD+GG ++FEF +F DRDVCR+ V + + A V P ++
Sbjct: 65 QALLNLTQDKGGGYMFEFANFKDRDVCRDLVGRVLGRLQCLPPSDQSAQVVPAQPTTQHD 124
Query: 677 EQLSRAETERRIKLLQENSELQKLHKQFVFGNILTDAEFWATRKKLLDKNDSRTPKQRLA 856
QLS AE E+R+ LL+E+SELQKLH+Q V G +LT+ EFWATRK LLD + KQR
Sbjct: 125 NQLSMAEMEQRMNLLREDSELQKLHRQLVIGGVLTETEFWATRKNLLDDAAHKASKQRAG 184
Query: 857 LKNEMWT-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLSFVPNKMSEKEFWTKY 1033
K+ M V+PL+DG++N+VTF+LTPEIIHQIFAEKPAV QA+L FVP+KMSE++FWTKY
Sbjct: 185 FKSAMLADVRPLTDGRTNKVTFSLTPEIIHQIFAEKPAVHQAFLKFVPSKMSERDFWTKY 244
Query: 1034 SRAEYLHSTRNVVXXXXXXXXXXXXXVFLKRDDMLASEARRKIRRVDPTVDMEADKGDDY 1213
RAEYLH T+N V VFLK DD+LASEARRKIRRVDPTVDM AD GDDY
Sbjct: 245 CRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTVDMAADLGDDY 304
Query: 1214 IHLPDHGLPNDEVKDVLEAHYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALS 1393
HLP HG+ D K+ +++ E +R+ QDLN+HAAVVL+GR +DVELGDTR+VAEAL+
Sbjct: 305 SHLPGHGILRDGSKESVDSESELPKRTLLQDLNRHAAVVLEGRTLDVELGDTRTVAEALA 364
Query: 1394 RSKQAELSNEISNRNLERELSDRISKMAEIEDLQGPQDPAVAPLSIKDPRDYFDSQQANA 1573
RSKQAE++ E S+ ++ +R+S+M EIEDLQ P+ APL IKDPR+YFDSQ+ANA
Sbjct: 365 RSKQAEVATETSDETENQKRLERVSQMTEIEDLQAPRSLPYAPLCIKDPREYFDSQRANA 424
Query: 1574 LKALGDTGSGAKPLKSSVSSHEAYGSLRDLISDIRGTGLSEPIMNQEVALKVLGSLTQNI 1753
KA GDTGSG +S+ +AY SLR I +++ G +PI+ ++ALKVL + Q +
Sbjct: 425 FKATGDTGSGVNKDCCHLSTKQAYESLRAQILEVKSVGFKDPIVIPDLALKVLNDVNQQL 484
Query: 1754 SSTKFNLGNNPHESVLDGLPKVTKEELLHHWTSVQELLKHFWSSYPITTKYLYTKVTRLK 1933
SST LG NP +VLD LP TKEELL HWTS+QELL+HFWSSYP+TT +L+ KV R+K
Sbjct: 485 SSTDPQLGKNPQATVLDMLPHRTKEELLQHWTSIQELLRHFWSSYPLTTTFLHAKVNRVK 544
Query: 1934 DAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSAKS 2095
DAM+Q+Y KL E+KESVQS+FRHQVSLLV PMLQ LD AF HYDA++Q+RS K+
Sbjct: 545 DAMAQIYRKLPEVKESVQSEFRHQVSLLVKPMLQVLDEAFKHYDAEMQKRSTKT 598
>ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
gi|557555944|gb|ESR65958.1| hypothetical protein
CICLE_v10007802mg [Citrus clementina]
Length = 564
Score = 672 bits (1734), Expect = 0.0
Identities = 346/570 (60%), Positives = 432/570 (75%), Gaps = 2/570 (0%)
Frame = +2
Query: 416 VFMPNDPKSTTKLNVDFKKIKGHKFTKEGSSKQALLNLTQDQGGNFIFEFDSFADRDVCR 595
+FMP++ S KL V+FK I+GHK+TKEGS+K L+NL QGG++IFEFDS++D VCR
Sbjct: 1 MFMPDNRNSGAKLVVEFKSIQGHKYTKEGSNKPPLINLANAQGGSYIFEFDSYSDLHVCR 60
Query: 596 EYVANAIAFHAEAGRAMPEASVAPLNNEQLSRAETERRIKLLQENSELQKLHKQFVFGNI 775
++V+ + E A E S L +EQLS E + RIKLLQENSELQKLH+QFV GNI
Sbjct: 61 DFVSKVLEKSKETPNAALEKSAVKLPDEQLSEEEMQLRIKLLQENSELQKLHRQFVGGNI 120
Query: 776 LTDAEFWATRKKLLDKNDSRTPKQRLALKNEMWT-VKPLSDGQSNRVTFNLTPEIIHQIF 952
LT+AEFWA RKKLLD++ S+ KQR+ K+ M + ++P +DG++N+VTF+LTPEII QIF
Sbjct: 121 LTEAEFWAARKKLLDRDPSKKSKQRVGFKSAMISDIRPATDGRTNKVTFSLTPEIILQIF 180
Query: 953 AEKPAVRQAYLSFVPNKMSEKEFWTKYSRAEYLHSTRNVVXXXXXXXXXXXXXVFLKRDD 1132
AEKPAV +A+L+FVPNKM+E EFWTKY RAEYL T+N VFLK DD
Sbjct: 181 AEKPAVHRAFLNFVPNKMTEMEFWTKYCRAEYLSRTKNYHAVVAEAAEDEELAVFLKEDD 240
Query: 1133 MLASEARRKIRRVDPTVDMEADKGDDYIHLPDHGLPNDEVKDVLEAHYEPYRRSFSQDLN 1312
+LA+E R+KIRRVDPT+DMEAD+GDDY HLPDHG+ D K+ E E YRR+ QDLN
Sbjct: 241 ILANEVRKKIRRVDPTLDMEADEGDDYTHLPDHGIFRDGTKESNELQSEHYRRTLLQDLN 300
Query: 1313 QHAAVVLQGRVVDVELGD-TRSVAEALSRSKQAELSNEISNRNLERELSDRISKMAEIED 1489
+HAAVVL+GR +DVE D TR++AEAL+RSK+ NE ++ N E DR ++AEIED
Sbjct: 301 RHAAVVLEGRTIDVEREDSTRALAEALARSKRG---NEGADNNANEERLDRTPRVAEIED 357
Query: 1490 LQGPQDPAVAPLSIKDPRDYFDSQQANALKALGDTGSGAKPLKSSVSSHEAYGSLRDLIS 1669
LQ P +APLSIKD R+YFDSQQAN LKA D+ + +K S+S EAYGS+RD IS
Sbjct: 358 LQAPHCLPLAPLSIKDAREYFDSQQANTLKASRDSQAS---MKCSLSRQEAYGSVRDAIS 414
Query: 1670 DIRGTGLSEPIMNQEVALKVLGSLTQNISSTKFNLGNNPHESVLDGLPKVTKEELLHHWT 1849
+I+ GLS+PI+N EVALKV LT NISS K++LG NP E+VLD LP TKE+LL+HW
Sbjct: 415 EIKDMGLSDPIVNPEVALKVYSGLTHNISSIKYHLGKNPRETVLDRLPSATKEKLLYHWM 474
Query: 1850 SVQELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPM 2029
S+QELLKHFWSSYPITT YLY+KV RLKDA+S +YP+L+E+KES+ +D RHQVSLLV PM
Sbjct: 475 SIQELLKHFWSSYPITTPYLYSKVNRLKDALSNIYPQLEEMKESLPADLRHQVSLLVRPM 534
Query: 2030 LQALDAAFAHYDADVQRRSAKSGERPNGFV 2119
QALDAA HYDAD+Q+RSAKSGE+PNG+V
Sbjct: 535 QQALDAAIQHYDADLQKRSAKSGEKPNGYV 564
>ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Capsella rubella]
gi|482575779|gb|EOA39966.1| hypothetical protein
CARUB_v10008654mg [Capsella rubella]
Length = 593
Score = 670 bits (1728), Expect = 0.0
Identities = 349/603 (57%), Positives = 441/603 (73%), Gaps = 3/603 (0%)
Frame = +2
Query: 320 MADKQVVKRAKYKSSVKDPGVAGVLKLNIERFVFMPNDPKSTTKLNVDFKKIKGHKFTKE 499
MA QV KR KYKSSVKDPG +G L++ +F+P+DPKS +KL V + IK K+TKE
Sbjct: 1 MAGGQVEKRVKYKSSVKDPGTSGFLRIKEAMLLFVPDDPKSDSKLKVQTQNIKSQKYTKE 60
Query: 500 GSSKQALLNLTQDQGGNFIFEFDSFADRDVCREYVANAIAFHAEAGRAMPEASVAPLNNE 679
GS K A LNLT QG + IFEF ++ D CR+++ A+A E P P + E
Sbjct: 61 GSQKPAWLNLTNKQGRSHIFEFGNYPDMHACRDFITKALAKCEEE----PNKPAVPASTE 116
Query: 680 QLSRAETERRIKLLQENSELQKLHKQFVFGNILTDAEFWATRKKLLDKNDSRTPKQRLAL 859
QLS E E R KLL+ENSELQ+LHKQFV +LT+ EFWATRKKLL K+ R KQ+L L
Sbjct: 117 QLSIRELELRFKLLKENSELQRLHKQFVESKVLTEDEFWATRKKLLGKDSIRKSKQQLGL 176
Query: 860 KNEMWT-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLSFVPNKMSEKEFWTKYS 1036
K+ M + +KP +DG++NRVTFNLTPEII QIFAEKPAVRQA++S+VP+KM+EK+FWTKY
Sbjct: 177 KSMMVSGIKPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFISYVPSKMTEKDFWTKYF 236
Query: 1037 RAEYLHSTRNVVXXXXXXXXXXXXXVFLKRDDMLASEARRKIRRVDPTVDMEADKGDDYI 1216
RAEYL+ST+N VFLK D++LA E R+KIRRVDPT+DMEAD+GDDY
Sbjct: 237 RAEYLYSTKNTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADEGDDYT 296
Query: 1217 HLPDHGLPNDEVKDVLEAHYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALSR 1396
HL DHG+ D +DV+E E ++RS QDLN+HAAVVL+GR +DV+ DTR VAEAL+R
Sbjct: 297 HLMDHGIQRDGTRDVVEPQNEQFKRSLLQDLNRHAAVVLEGRSIDVDSEDTRIVAEALTR 356
Query: 1397 SKQAELSNEISNRNLERELSDRISKMAEIEDLQGPQDPAVAPLSIKDPRDYFDSQQANAL 1576
KQ ++ + ++ +E +R+S++A +EDLQ PQ+ +APLSIKDPRDYF+SQQ N L
Sbjct: 357 VKQVSKADGETGKDANQERLERMSRVAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVL 416
Query: 1577 KALGDTGSGAKPLKSSVSSHEAYGSLRDLISDIRGTGLSEPIMNQEVALKVLGSLTQNIS 1756
A G K LK +V HEA+G L++ I +IR GLS+P++ EV+ +V SLT+ IS
Sbjct: 417 NA----PRGTKGLKRNV--HEAFGLLKESIVEIRARGLSDPLIKPEVSFEVFSSLTRTIS 470
Query: 1757 STKFNLGNNPHESVLDGLPKVTKEELLHHWTSVQELLKHFWSSYPITTKYLYTKVTRLKD 1936
+ K +G NP ES LD LPK TK+E+LHHWTS+QELL+HFWSSYPITT YL+TKV +LKD
Sbjct: 471 TAKNIIGKNPRESFLDRLPKSTKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKD 530
Query: 1937 AMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSAKS--GERPN 2110
AMS Y KL+ +KESVQSD RHQ+SLLV PM QALDAAF HY+AD+QRR+AKS GERPN
Sbjct: 531 AMSNTYSKLEAMKESVQSDLRHQISLLVRPMQQALDAAFQHYEADLQRRTAKSSGGERPN 590
Query: 2111 GFV 2119
G+V
Sbjct: 591 GYV 593
>ref|NP_175971.3| probable RNA polymerase II transcription factor B subunit 1-1
[Arabidopsis thaliana]
gi|122215373|sp|Q3ECP0.1|TFB1A_ARATH RecName:
Full=Probable RNA polymerase II transcription factor B
subunit 1-1; AltName: Full=General transcription and DNA
repair factor IIH subunit TFB1-1; Short=AtTFB1-1;
Short=TFIIH subunit TFB1-1 gi|110741140|dbj|BAE98663.1|
hypothetical protein [Arabidopsis thaliana]
gi|332195172|gb|AEE33293.1| probable RNA polymerase II
transcription factor B subunit 1-1 [Arabidopsis thaliana]
Length = 591
Score = 664 bits (1714), Expect = 0.0
Identities = 346/601 (57%), Positives = 438/601 (72%), Gaps = 1/601 (0%)
Frame = +2
Query: 320 MADKQVVKRAKYKSSVKDPGVAGVLKLNIERFVFMPNDPKSTTKLNVDFKKIKGHKFTKE 499
MA Q+ K KYKS+VKDPG G L++ +F+PNDPKS +KL V + IK K+TKE
Sbjct: 1 MAGGQIEKLVKYKSTVKDPGTPGFLRIREGMLLFVPNDPKSDSKLKVLTQNIKSQKYTKE 60
Query: 500 GSSKQALLNLTQDQGGNFIFEFDSFADRDVCREYVANAIAFHAEAGRAMPEASVAPLNNE 679
GS+K LNLT Q + IFEF+++ D CR+++ A+A P SV ++E
Sbjct: 61 GSNKPPWLNLTNKQAKSHIFEFENYPDMHACRDFITKALA----KCELEPNKSVVSTSSE 116
Query: 680 QLSRAETERRIKLLQENSELQKLHKQFVFGNILTDAEFWATRKKLLDKNDSRTPKQRLAL 859
QLS E E R KLL+ENSELQ+LHKQFV +LT+ EFWATRKKLL K+ R KQ+L L
Sbjct: 117 QLSIKELELRFKLLRENSELQRLHKQFVESKVLTEDEFWATRKKLLGKDSIRKSKQQLGL 176
Query: 860 KNEMWT-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLSFVPNKMSEKEFWTKYS 1036
K+ M + +KP +DG++NRVTFNLTPEII QIFAEKPAVRQA++++VP+KM+EK+FWTKY
Sbjct: 177 KSMMVSGIKPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYF 236
Query: 1037 RAEYLHSTRNVVXXXXXXXXXXXXXVFLKRDDMLASEARRKIRRVDPTVDMEADKGDDYI 1216
RAEYL+ST+N VFLK D++LA E R KIRRVDPT+DMEAD+GDDY
Sbjct: 237 RAEYLYSTKNTAVAAAEAAEDEELAVFLKPDEILARETRHKIRRVDPTLDMEADQGDDYT 296
Query: 1217 HLPDHGLPNDEVKDVLEAHYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALSR 1396
HL DHG+ D DV+E + ++RS QDLN+HAAVVL+GR +DVE DTR VAEAL+R
Sbjct: 297 HLMDHGIQRDGTMDVVEPQNDQFKRSLLQDLNRHAAVVLEGRSIDVESEDTRIVAEALTR 356
Query: 1397 SKQAELSNEISNRNLERELSDRISKMAEIEDLQGPQDPAVAPLSIKDPRDYFDSQQANAL 1576
KQ ++ + ++ +E +R+S++A +EDLQ PQ+ +APLSIKDPRDYF+SQQ N L
Sbjct: 357 VKQVSKADGETTKDANQERLERMSRVAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVL 416
Query: 1577 KALGDTGSGAKPLKSSVSSHEAYGSLRDLISDIRGTGLSEPIMNQEVALKVLGSLTQNIS 1756
+ GAK LK +V HEAYG L++ I +IR TGLS+P++ EV+ +V SLT+ I+
Sbjct: 417 ----NVPRGAKGLKRNV--HEAYGLLKESILEIRATGLSDPLIKPEVSFEVFSSLTRTIA 470
Query: 1757 STKFNLGNNPHESVLDGLPKVTKEELLHHWTSVQELLKHFWSSYPITTKYLYTKVTRLKD 1936
+ K G NP ES LD LPK TK+E+LHHWTS+QELLKHFWSSYPITT YL+TKV +LKD
Sbjct: 471 TAKNINGKNPRESFLDRLPKSTKDEVLHHWTSIQELLKHFWSSYPITTTYLHTKVGKLKD 530
Query: 1937 AMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSAKSGERPNGF 2116
AMS Y KL+ +KESVQSD RHQVSLLV PM QALDAAF HY+ D+QRR+AKSGERPNG+
Sbjct: 531 AMSNTYSKLEAMKESVQSDLRHQVSLLVRPMQQALDAAFHHYEVDLQRRTAKSGERPNGY 590
Query: 2117 V 2119
V
Sbjct: 591 V 591
>ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arabidopsis lyrata subsp.
lyrata] gi|297340367|gb|EFH70784.1| hypothetical protein
ARALYDRAFT_892577 [Arabidopsis lyrata subsp. lyrata]
Length = 592
Score = 663 bits (1711), Expect = 0.0
Identities = 350/602 (58%), Positives = 440/602 (73%), Gaps = 2/602 (0%)
Frame = +2
Query: 320 MADKQVVKRAKYKSSVKDPGVAGVLKLNIERFVFMPNDPKSTTKLNVDFKKIKGHKFTKE 499
MA QV KR KYKSSVKDPG G L++ +F+PNDPKS +KL V + IK K TKE
Sbjct: 1 MAGGQVEKRVKYKSSVKDPGTPGFLRIREGMLLFVPNDPKSDSKLKVLTQNIKSQKNTKE 60
Query: 500 GSSKQALLNLTQDQGGNFIFEFDSFADRDVCREYVANAIAFHAEAGRAMPEASVAPLNNE 679
S+K LNLT G + IFEF+++ D CR+++ A+A E P SV ++E
Sbjct: 61 ESNKPPWLNLTNKLGKSHIFEFENYPDMHACRDFITKALAKCEEE----PNKSVVSTSSE 116
Query: 680 QLSRAETERRIKLLQENSELQKLHKQFVFGNILTDAEFWATRKKLLDKNDSRTPKQRLAL 859
QLS E E R KLL+ENSELQ+LHKQFV +LT+ EFWATRKKLL K+ R KQ++ L
Sbjct: 117 QLSIKELELRFKLLRENSELQRLHKQFVESKVLTEDEFWATRKKLLGKDSIRKSKQQVGL 176
Query: 860 KNEMWT-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLSFVPNKMSEKEFWTKYS 1036
K+ M + +KP +DG++NRVTFNLTPEII QIFAEKPAVRQA++++VP+KM+EK+FWTKY
Sbjct: 177 KSMMVSGIKPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYF 236
Query: 1037 RAEYLHSTRNVVXXXXXXXXXXXXXVFLKRDDMLASEARRKIRRVDPTVDMEADKGDDYI 1216
RAEYL+ST+N VFLK D++LA E R+KIRRVDPT+DMEAD+GDDY
Sbjct: 237 RAEYLYSTKNTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADQGDDYT 296
Query: 1217 HLPDHGLPNDEVKDVLEAHYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALSR 1396
HL DHG+ D DV+E + +RRS QDLN+HAAVVL+GR +DVE DTR VAEAL+R
Sbjct: 297 HLMDHGIQRDGTMDVVEPQNDQFRRSLLQDLNRHAAVVLEGRSIDVESEDTRIVAEALTR 356
Query: 1397 SKQAELSNEISNRNLERELSDRISKMAEIEDLQGPQDPAVAPLSIKDPRDYFDSQQANAL 1576
KQ ++ + ++ E +R+S++A +EDLQ PQ+ +APLSIKDPRDYF+SQQ N L
Sbjct: 357 VKQVSKADGETTKDANLERLERMSRLAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVL 416
Query: 1577 KALGDTGSGAKPLKSSVSSHEAYGSLRDLISDIRGTGLSEPIMNQEVALKVLGSLTQNIS 1756
+ GAK LK +V HEAYG L++ I +IR TGLS+P++ EV+ +V SLT+ IS
Sbjct: 417 ----NVPRGAKGLKRNV--HEAYGLLKESILEIRATGLSDPLIRPEVSFEVFSSLTRTIS 470
Query: 1757 STKFNLGNNPHESVLDGLPKVTKEELLHHWTSVQELLKHFWSSYPITTKYLYTKVTRLKD 1936
+ K +G NP ES LD LPK TK+E+LHHWTS+QELL+HFWSSYPITT YL+TKV +LKD
Sbjct: 471 TAKNIIGKNPRESFLDRLPKSTKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKD 530
Query: 1937 AMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSAKS-GERPNG 2113
AMS Y KL+ +KESVQSD RHQVSLLV PM QALDAAF HY+AD+QRR+AKS GERPNG
Sbjct: 531 AMSNTYSKLEAMKESVQSDLRHQVSLLVRPMQQALDAAFQHYEADLQRRTAKSGGERPNG 590
Query: 2114 FV 2119
+V
Sbjct: 591 YV 592
>ref|XP_002310512.2| transcription factor-related family protein [Populus trichocarpa]
gi|550334091|gb|EEE90962.2| transcription factor-related
family protein [Populus trichocarpa]
Length = 603
Score = 659 bits (1701), Expect = 0.0
Identities = 348/605 (57%), Positives = 440/605 (72%), Gaps = 6/605 (0%)
Frame = +2
Query: 320 MADKQVVKRAKYKSSVKDPGVAGVLKLNIERFVFMPNDPKSTTKLNVDFKKIKGHKFTKE 499
MA QV KR K+KSSVKDPG G L L +ER +F PN P S TKLN++F+ +K HK+TKE
Sbjct: 1 MASGQVSKRVKFKSSVKDPGTPGRLYLTLERLMFKPNSPNSATKLNMEFRFVKNHKYTKE 60
Query: 500 GSSKQALLNLTQDQGGNFIFEFDSFADRDVCREYVANAIAFHAEAGRAMPEASVAPLNNE 679
GS+K +LNLT QG ++IFEF+S+ D VC+E V A++ E + + + V +E
Sbjct: 61 GSNKAPMLNLTSSQGVSYIFEFESYDDLHVCKECVGKALSKTGETPKPIDTSEVP---SE 117
Query: 680 QLSRAETERRIKLLQENSELQKLHKQFVFGNILTDAEFWATRKKLLDKNDSRTPKQRLAL 859
Q S E R+ +LQENSELQ LHK+FV ILT+AEFWATRKKLL N S+ KQR L
Sbjct: 118 QPSTEELLLRMNMLQENSELQNLHKRFVSDGILTEAEFWATRKKLLGGNFSKKSKQRTGL 177
Query: 860 KNEMWT-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLSFVPNKMSEKEFWTKYS 1036
K+ + + KP +DG++N+VTF LTPEI+ ++FAEKPAV +AYL VP KMSE++FW+KY
Sbjct: 178 KSFVLSDTKPSTDGRTNKVTFTLTPEIVREVFAEKPAVHRAYLDLVPKKMSERDFWSKYC 237
Query: 1037 RAEYLHSTRNV---VXXXXXXXXXXXXXVFLKRDDMLASEARRKIRRVDPTVDMEADKGD 1207
RAEYL +N +FLK DD+LASE RRKIR VDPT++MEAD+GD
Sbjct: 238 RAEYLQHAKNANAAAAAAAEAAEDEELALFLKPDDILASETRRKIRCVDPTLNMEADEGD 297
Query: 1208 DYIHLPDHGLPNDEVKDVLEAHYEPYRRSFSQDLNQHAAVVLQGRVVDVE-LGDTRSVAE 1384
DY HLPDHG+ D K++ E+ +E Y R+ SQ+LN+HAAVVLQG +D E L DT++VAE
Sbjct: 298 DYTHLPDHGIVRDGSKEITESQHELYIRTLSQELNRHAAVVLQGTPIDEEQLKDTQTVAE 357
Query: 1385 ALSRSKQAE-LSNEISNRNLERELSDRISKMAEIEDLQGPQDPAVAPLSIKDPRDYFDSQ 1561
AL +SKQ + SNE ++ N ++ RISKM EI+DLQ D +APLSIKDPRDYFDSQ
Sbjct: 358 ALKQSKQGQNASNEETDMNANQDRLSRISKMMEIDDLQASSDLPLAPLSIKDPRDYFDSQ 417
Query: 1562 QANALKALGDTGSGAKPLKSSVSSHEAYGSLRDLISDIRGTGLSEPIMNQEVALKVLGSL 1741
QA ALK DT G P+K +S+ E+Y SLRD IS I+ TGL +PI+ EVA+KVL L
Sbjct: 418 QATALKNSRDTSIGTDPVKRILSAEESYASLRDSISLIKTTGLVDPIIKPEVAVKVLSVL 477
Query: 1742 TQNISSTKFNLGNNPHESVLDGLPKVTKEELLHHWTSVQELLKHFWSSYPITTKYLYTKV 1921
T NISSTK++ G N SVLD LP KEELL+HWTS+QELLKH+WSSYPITT YLYTKV
Sbjct: 478 THNISSTKYDTGKNHGLSVLDTLPNTIKEELLYHWTSLQELLKHYWSSYPITTTYLYTKV 537
Query: 1922 TRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSAKSGE 2101
+RLKDAMS++ +LQE+KESVQSD RHQV+LL+ PM QAL+AA HYDA++Q+RSA+SG+
Sbjct: 538 SRLKDAMSKIDSQLQELKESVQSDLRHQVTLLLRPMQQALEAAMQHYDAELQKRSARSGD 597
Query: 2102 RPNGF 2116
R NG+
Sbjct: 598 RSNGY 602
>ref|XP_002530618.1| TFIIH basal transcription factor complex subunit, putative [Ricinus
communis] gi|223529828|gb|EEF31761.1| TFIIH basal
transcription factor complex subunit, putative [Ricinus
communis]
Length = 597
Score = 659 bits (1701), Expect = 0.0
Identities = 351/603 (58%), Positives = 442/603 (73%), Gaps = 4/603 (0%)
Frame = +2
Query: 320 MADKQVVKRAKYKSSVKDPGVAGVLKLNIERFVFMPNDPKSTTKLNVDFKKIKGHKFTKE 499
MA KQV KR KYK+S+KDPG G L L +E+ F PN+P S +KL++DFK + HK TKE
Sbjct: 1 MASKQVTKRVKYKTSLKDPGTPGRLLLTMEKLAFRPNNPNSASKLDMDFKYVTNHKNTKE 60
Query: 500 GSSKQALLNLTQDQGGNFIFEFDSFADRDVCREYVANAIAFHAEAGRAMPEASVAPLNNE 679
GS+K A+LNLT +QG ++IFEF++ D +C+E V A++ + + P+A P ++
Sbjct: 61 GSAK-AMLNLTSNQGVSYIFEFENHDDLRICKEIVGKALSKLGDTPKP-PDAPEVP--SD 116
Query: 680 QLSRAETERRIKLLQENSELQKLHKQFVFGNILTDAEFWATRKKLLDKNDSRTPKQRLAL 859
Q S E R+ LL+EN ELQKLHKQFV +LTD+EFWATRKKLL+ SR KQR+ L
Sbjct: 117 QPSTEELLLRMNLLRENLELQKLHKQFVSDRVLTDSEFWATRKKLLNGEFSRKSKQRVGL 176
Query: 860 KNEMWT-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLSFVPNKMSEKEFWTKYS 1036
K+ M KPL DGQ+N+VTFNLTPEI+ +IFAEKPAV QAYLS VPNKMSE++FWTKY
Sbjct: 177 KSVMLADSKPLIDGQTNKVTFNLTPEIVREIFAEKPAVHQAYLSLVPNKMSERDFWTKYC 236
Query: 1037 RAEYLHSTRNVVXXXXXXXXXXXXXVFLKRDDMLASEARRKIRRVDPTVDMEADKGDDYI 1216
RAEYL +RN+ +FLK DD+LASE R+KIR VDPT+DMEAD+GDDY
Sbjct: 237 RAEYLQRSRNIHAAAAEAAEDEELALFLKPDDILASETRQKIRCVDPTLDMEADQGDDYT 296
Query: 1217 HLPDHGLPNDEVKDVLEAHYEPYRRSFSQDLNQHAAVVLQGRVVDVE-LGDTRSVAEALS 1393
HLPDHG+ D KDV+E+ +EPYRR+ QDLN+HAAVVL+G +D E L DT++VA+AL+
Sbjct: 297 HLPDHGIVRDGSKDVIESQHEPYRRTLLQDLNRHAAVVLEGTAIDDEQLQDTKAVADALA 356
Query: 1394 RSKQA-ELSNEISNRNLERELSDRISKMAEIEDLQGPQDPAVAPLSIKDPRDYFDSQQAN 1570
RSK+ + N ++ N +E S+RIS+M EIEDLQG D +APL IKDPRDYFDSQQA+
Sbjct: 357 RSKRGIKTINREADGNANQERSNRISQMMEIEDLQGSNDHHLAPLCIKDPRDYFDSQQAS 416
Query: 1571 ALKALGDTGSGAKPLKSSVSSHEAYGSLRDLISDIRGTGLSEPIMNQEVALKVLGSLTQN 1750
ALK D SG + + S+SS EAY SLRD I+ + GL++PI+ E+A KVL LT N
Sbjct: 417 ALKNSRDIPSGTEAARCSLSSQEAYASLRDSITQTKAMGLNDPIVKPEIATKVLSILTHN 476
Query: 1751 ISSTKFNLGNNPHESVLDGLPKVTKEELLHHWTSVQELLKHFWSSYPITTKYLYTKVTRL 1930
ISSTK++LG N ESVLD LP KEELLHHW S++ELL+H+WSSYPITT YLY KV+RL
Sbjct: 477 ISSTKYHLGKNSRESVLDRLPNTIKEELLHHWMSIEELLRHYWSSYPITTAYLYAKVSRL 536
Query: 1931 KDAMSQVYPKLQEIKESVQSDFR-HQVSLLVHPMLQALDAAFAHYDADVQRRSAKSGERP 2107
KDAMS++ +LQE+KESVQSD H SL + P AL+AA HYDAD+Q+RSAKS ERP
Sbjct: 537 KDAMSKIDSQLQEMKESVQSDLXFHATSLGIVP---ALEAAMQHYDADLQKRSAKSAERP 593
Query: 2108 NGF 2116
NG+
Sbjct: 594 NGY 596
>ref|XP_006392607.1| hypothetical protein EUTSA_v10011333mg [Eutrema salsugineum]
gi|557089185|gb|ESQ29893.1| hypothetical protein
EUTSA_v10011333mg [Eutrema salsugineum]
Length = 597
Score = 648 bits (1672), Expect = 0.0
Identities = 340/602 (56%), Positives = 436/602 (72%), Gaps = 6/602 (0%)
Frame = +2
Query: 332 QVVKRAKYKSSVKDPGVAGVLKLNIERFVFMPNDPKSTTKLNVDFKKIKGHKFTKEGSSK 511
QV KR +YKSSVKDPG G L+L +F+PNDPKS +KL V IK K+TKEGS+K
Sbjct: 6 QVEKRVRYKSSVKDPGTPGFLRLTEAMLLFVPNDPKSDSKLKVQTLNIKSQKYTKEGSNK 65
Query: 512 QALLNLTQDQGGNFIFEFDSFADRDVCREYVANAIAFHAEAGRAMPEASVAPLNNEQLSR 691
LNLT QG + IFEF++++D CR+++ A+A E +P+ S + EQLS
Sbjct: 66 PPWLNLTNKQGKSHIFEFENYSDMHACRDFITKALAKCEE----VPKKSAVSTSTEQLSI 121
Query: 692 AETERRIKLLQENSELQKLHKQFVFGNILTDAEFWATRKKLLDKNDSRTPKQRLALKNEM 871
AE E R K+L+ENSELQ+LHKQFV +LT+ EFWATRKKLL + + KQ++ LK+ M
Sbjct: 122 AELELRFKVLRENSELQRLHKQFVESKVLTEDEFWATRKKLLGQVSTGKSKQQVGLKSMM 181
Query: 872 WT-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLSFVPNKMSEKEFWTKYSRAEY 1048
+ +KP +DG++NRVTFNLT EII QIFAEKPAVRQA++++VP+KM+EK+FWTKY RAEY
Sbjct: 182 VSGIKPSTDGRTNRVTFNLTSEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYFRAEY 241
Query: 1049 LHSTRNVVXXXXXXXXXXXXXVFLKRDDMLASEARRKIRRVDPTVDMEADKGDDYIHLPD 1228
L+ST+N VFLK D++LA E R+KIRRVDPT+DMEAD+GDDY HL D
Sbjct: 242 LYSTKNTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADQGDDYSHLMD 301
Query: 1229 HGLPNDEVKDVLEAHYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALSRSKQA 1408
HG+ D KDV+E+ + +RRS QDLN+H+AVVL+GR +DVE DTR VAEAL+R+KQ
Sbjct: 302 HGIQRDGTKDVVESQNDQFRRSLLQDLNRHSAVVLEGRSIDVESEDTRVVAEALTRAKQV 361
Query: 1409 ELSNEISNRNLERELSDRISKMAEIEDLQGPQDPAVAPLSIKDPRDYFDSQQANALKALG 1588
++ + ++ ++ +R+S+ AE+EDLQ PQ+ +APLSIKDPRDYF+SQQ N L
Sbjct: 362 SKADGETTKDANQDRLERMSRTAEMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVL---- 417
Query: 1589 DTGSGAKPLKSSVSSHEAYGSLRDLISDIRGTGLSEPIMNQEVALKVLGSLTQNISSTKF 1768
+ GA L +V HEAYG L++ I +IR GLS P++ EV+ +V SLTQ IS+ K
Sbjct: 418 NEPRGAGALNRNV--HEAYGLLKESILEIRTKGLSYPLIKSEVSFEVFSSLTQTISTAKN 475
Query: 1769 NLGNNPHESVLDGLPKVTKEELLHHWTSVQELLKHFWSSYPITTKYLYTKVTRLKDAMSQ 1948
+G NP ES LD LPK TK+E+LHHWTS+QELL+HFWSSYPITT YL+TKV +LKDAMS
Sbjct: 476 IIGKNPRESFLDRLPKSTKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKDAMSN 535
Query: 1949 VYPKLQEIKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSAK-----SGERPNG 2113
Y +L +K+SVQSD RHQVSLLV PM QALDAAF HY+ D+QRR+AK S ERPNG
Sbjct: 536 TYSQLDAMKQSVQSDLRHQVSLLVRPMQQALDAAFQHYETDLQRRTAKSVGGSSSERPNG 595
Query: 2114 FV 2119
V
Sbjct: 596 GV 597
>gb|ESW16172.1| hypothetical protein PHAVU_007G134900g [Phaseolus vulgaris]
Length = 588
Score = 643 bits (1658), Expect = 0.0
Identities = 338/601 (56%), Positives = 432/601 (71%), Gaps = 1/601 (0%)
Frame = +2
Query: 320 MADKQVVKRAKYKSSVKDPGVAGVLKLNIERFVFMPNDPKSTTKLNVDFKKIKGHKFTKE 499
M+ QVVKR KYK++VKDPG +GVLKL E+FVF PNDP S KL+V+F+ IK HK TKE
Sbjct: 1 MSSGQVVKRVKYKATVKDPGTSGVLKLTQEKFVFKPNDPTSNNKLDVEFRFIKSHKHTKE 60
Query: 500 GSSKQALLNLTQDQGGNFIFEFDSFADRDVCREYVANAIAFHAEAGRAMPEASVAPLNNE 679
GS K LNLT QG ++IFE DSFAD VCRE V A++ H + + ++ E
Sbjct: 61 GSGKPPWLNLTHAQG-SYIFELDSFADLHVCRELVGIALSKHVQG------EATKVISEE 113
Query: 680 QLSRAETERRIKLLQENSELQKLHKQFVFGNILTDAEFWATRKKLLDKNDSRTPKQRLAL 859
QLS AE RIKLLQE+S+LQ+LHK+ V LT++EFWAT+KKLLD+++SR KQR+
Sbjct: 114 QLSSAEMTLRIKLLQEDSKLQRLHKELVASGKLTESEFWATKKKLLDQDESRKLKQRIGF 173
Query: 860 KNEM-WTVKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLSFVPNKMSEKEFWTKYS 1036
KN + + KP+SDG+ N+V F LTPEI +QIF KPAV QA+L+FVP+KM+E +FW KY
Sbjct: 174 KNSLIFDTKPMSDGRINQVKFQLTPEIKYQIFTLKPAVHQAFLNFVPSKMNEVDFWNKYF 233
Query: 1037 RAEYLHSTRNVVXXXXXXXXXXXXXVFLKRDDMLASEARRKIRRVDPTVDMEADKGDDYI 1216
+AEYLHST+N V VFLK D++L EAR+K+RRVDPT+DMEAD+GDDY
Sbjct: 234 KAEYLHSTKNAVAAAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYT 293
Query: 1217 HLPDHGLPNDEVKDVLEAHYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALSR 1396
HLPDHG+ D K++ EA Y+R+ QDLN+ AVVL+G+ +D+E+ + R+VAE L+R
Sbjct: 294 HLPDHGIFRDGSKEISEAQNSLYKRTLLQDLNRQGAVVLEGKTLDMEMENPRTVAEILAR 353
Query: 1397 SKQAELSNEISNRNLERELSDRISKMAEIEDLQGPQDPAVAPLSIKDPRDYFDSQQANAL 1576
KQ S+E+ + E +RISKM IEDLQ D APL IKDPRDYFD QQANA+
Sbjct: 354 RKQE--SDEVVG---DEERRNRISKMTPIEDLQSQDDHRYAPLCIKDPRDYFDFQQANAV 408
Query: 1577 KALGDTGSGAKPLKSSVSSHEAYGSLRDLISDIRGTGLSEPIMNQEVALKVLGSLTQNIS 1756
K L D+ G + + S+ S EAYGSLR IS I+ TGL +P+ + EVALKVL LT+NIS
Sbjct: 409 KTLDDSQPGMEQMMCSLGSEEAYGSLRASISKIQTTGLRDPLFSPEVALKVLHGLTKNIS 468
Query: 1757 STKFNLGNNPHESVLDGLPKVTKEELLHHWTSVQELLKHFWSSYPITTKYLYTKVTRLKD 1936
S+K++LG ESVLD LP TKE+LL HW QELL+H+WSSYP+TT+ L K RLKD
Sbjct: 469 SSKYHLGKTSQESVLDILPNTTKEKLLDHWVCSQELLRHYWSSYPVTTQNLVNKTRRLKD 528
Query: 1937 AMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSAKSGERPNGF 2116
++SQ+Y KL+EIK S QSD RHQVSL+VHPM QALDAA HYDAD+++R+A+ G + NG+
Sbjct: 529 SISQIYSKLEEIKVSAQSDLRHQVSLVVHPMQQALDAALLHYDADIRKRNAR-GSKSNGY 587
Query: 2117 V 2119
V
Sbjct: 588 V 588
>ref|XP_004496077.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1-like [Cicer arietinum]
Length = 586
Score = 642 bits (1657), Expect = 0.0
Identities = 334/602 (55%), Positives = 434/602 (72%), Gaps = 1/602 (0%)
Frame = +2
Query: 317 LMADKQVVKRAKYKSSVKDPGVAGVLKLNIERFVFMPNDPKSTTKLNVDFKKIKGHKFTK 496
+ + +QVVKRAKYK++VKDPG GVLKL E+ VF PNDP S ++ VDF+ IK HK TK
Sbjct: 1 MSSSQQVVKRAKYKTTVKDPGTPGVLKLTQEKLVFKPNDPTSNNRVEVDFRLIKNHKHTK 60
Query: 497 EGSSKQALLNLTQDQGGNFIFEFDSFADRDVCREYVANAIAFHAEAGRAMPEASVAPLNN 676
EGS+K LNL QG ++IFE ++F+D VCRE V A++ H E + + ++
Sbjct: 61 EGSNKPPWLNLGHSQG-SYIFELENFSDLHVCRELVGIALSKHVEPPKVV--------SD 111
Query: 677 EQLSRAETERRIKLLQENSELQKLHKQFVFGNILTDAEFWATRKKLLDKNDSRTPKQRLA 856
EQLS AE RIKLLQE+S+LQKLHK V LT++EFWAT+KKLLD+++SR KQR+
Sbjct: 112 EQLSPAEMTLRIKLLQEDSKLQKLHKDLVASGKLTESEFWATKKKLLDQDESRKLKQRIG 171
Query: 857 LKNEM-WTVKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLSFVPNKMSEKEFWTKY 1033
KN + + KP SDG+ N+V F LTPEI +QIFA KPAV QA+L+FVP+KMSE +FW KY
Sbjct: 172 FKNSLIFDTKPTSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPSKMSEVDFWNKY 231
Query: 1034 SRAEYLHSTRNVVXXXXXXXXXXXXXVFLKRDDMLASEARRKIRRVDPTVDMEADKGDDY 1213
+AEY+HST+N + VFLK D++L +EAR+K+RRVDPT+DMEAD+GDDY
Sbjct: 232 FKAEYIHSTKNTIAAAAEAAEDEDLAVFLKDDEILENEARKKVRRVDPTLDMEADQGDDY 291
Query: 1214 IHLPDHGLPNDEVKDVLEAHYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALS 1393
HLPDHG+ D K+ EA YRR+ QDLN+ + VVL+G+ +D+++ R+VAE L+
Sbjct: 292 THLPDHGIFRDGSKETAEAQNTFYRRTLLQDLNRQSEVVLEGKTLDMDMEHPRTVAEVLA 351
Query: 1394 RSKQAELSNEISNRNLERELSDRISKMAEIEDLQGPQDPAVAPLSIKDPRDYFDSQQANA 1573
R KQ S+ +E E +RISKM +IEDLQ D APL IKDPRDYFDSQQ NA
Sbjct: 352 RRKQE------SDGVIEEERRNRISKMTQIEDLQAQDDHRFAPLCIKDPRDYFDSQQVNA 405
Query: 1574 LKALGDTGSGAKPLKSSVSSHEAYGSLRDLISDIRGTGLSEPIMNQEVALKVLGSLTQNI 1753
LK+L D+ +G + ++ ++ S EAYGSLR+ IS I+ GL +P+++ EVA KVL LT+NI
Sbjct: 406 LKSLDDSLAGKEQIRCNLGSEEAYGSLRESISKIKAIGLMDPLLSPEVAFKVLNGLTKNI 465
Query: 1754 SSTKFNLGNNPHESVLDGLPKVTKEELLHHWTSVQELLKHFWSSYPITTKYLYTKVTRLK 1933
SSTK +LG + ESVLD LP TKE+LL HW QELL+HFWSSYP+TT+ L K R+K
Sbjct: 466 SSTKSHLGKSSQESVLDILPNTTKEKLLDHWVCSQELLRHFWSSYPVTTQNLVNKTKRMK 525
Query: 1934 DAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSAKSGERPNG 2113
DA+SQ+Y KL+EIK S +SD RHQVSL+VHPM QALDAA HYDADV++R+A+ G +PNG
Sbjct: 526 DAISQIYSKLEEIKVSAKSDLRHQVSLVVHPMQQALDAALLHYDADVRKRNAR-GTKPNG 584
Query: 2114 FV 2119
+V
Sbjct: 585 YV 586
>ref|XP_006589332.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-3-like isoform X1 [Glycine max]
gi|571483735|ref|XP_006589333.1| PREDICTED: probable RNA
polymerase II transcription factor B subunit 1-3-like
isoform X2 [Glycine max]
Length = 587
Score = 640 bits (1651), Expect = 0.0
Identities = 334/601 (55%), Positives = 438/601 (72%), Gaps = 1/601 (0%)
Frame = +2
Query: 320 MADKQVVKRAKYKSSVKDPGVAGVLKLNIERFVFMPNDPKSTTKLNVDFKKIKGHKFTKE 499
M+ +QVVKRAKYK++VKDPG GVLKL +RFVF PNDP S TKL+V+F+ I+GHK TKE
Sbjct: 1 MSSRQVVKRAKYKTTVKDPGTPGVLKLTQDRFVFKPNDPTSKTKLDVEFRFIQGHKVTKE 60
Query: 500 GSSKQALLNLTQDQGGNFIFEFDSFADRDVCREYVANAIAFHAEAGRAMPEASVAPLNNE 679
GS + LLNL + QG + IFE +SFAD VCRE V A+ R +P + ++ E
Sbjct: 61 GSKQPPLLNLIRAQG-SCIFELESFADLHVCRELVGFAL------NRNVPGEATKVISEE 113
Query: 680 QLSRAETERRIKLLQENSELQKLHKQFVFGNILTDAEFWATRKKLLDKNDSRTPKQRLAL 859
QLS AE RIKLLQE+S+LQ+LHK+ V LT++EFWAT+KKLLD+++SR KQR+
Sbjct: 114 QLSPAEMALRIKLLQEDSKLQRLHKELVASGKLTESEFWATKKKLLDQDESRKLKQRIGF 173
Query: 860 KNEM-WTVKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLSFVPNKMSEKEFWTKYS 1036
KN + + KP+SDG+ N+V F LTPEI +QIFA KPAV QA+L+FVP+KM+E +FW KY
Sbjct: 174 KNSLIFDTKPMSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPSKMNEVDFWNKYF 233
Query: 1037 RAEYLHSTRNVVXXXXXXXXXXXXXVFLKRDDMLASEARRKIRRVDPTVDMEADKGDDYI 1216
+AEYLHST+N V VFLK D++L EAR+K+RRVDPT+DMEAD+GDDY
Sbjct: 234 KAEYLHSTKNAVAAAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYT 293
Query: 1217 HLPDHGLPNDEVKDVLEAHYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALSR 1396
HLPDHG+ D KD+ EA Y+R+ QDLN+ AVVL+G+ +D+E+ R+VAE L+R
Sbjct: 294 HLPDHGIFRDGSKDISEAQNSLYKRTLLQDLNRQGAVVLEGKTLDMEMEHPRTVAEILAR 353
Query: 1397 SKQAELSNEISNRNLERELSDRISKMAEIEDLQGPQDPAVAPLSIKDPRDYFDSQQANAL 1576
KQ + ++ E +RISKM IEDLQ + APL IKDPRDYFDSQQANA+
Sbjct: 354 RKQE------CDGVVDEERRNRISKMTPIEDLQAQDNHPYAPLCIKDPRDYFDSQQANAV 407
Query: 1577 KALGDTGSGAKPLKSSVSSHEAYGSLRDLISDIRGTGLSEPIMNQEVALKVLGSLTQNIS 1756
K L D+ +G + +K S+ S EAY SLR IS I+ TGL +P+ + +VALKVL LT+NI+
Sbjct: 408 KTLDDSQAGMEQMKCSLGSEEAYDSLRASISKIKTTGLRDPLFSPDVALKVLNGLTKNIT 467
Query: 1757 STKFNLGNNPHESVLDGLPKVTKEELLHHWTSVQELLKHFWSSYPITTKYLYTKVTRLKD 1936
STK++LG + ESVLD LP TKE+LL HW QELL+HFWSSYP++T+ L +K RLKD
Sbjct: 468 STKYHLGKSSQESVLDILPNSTKEKLLDHWVCSQELLRHFWSSYPVSTQNLVSKTRRLKD 527
Query: 1937 AMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSAKSGERPNGF 2116
++SQ+Y KL++IK S +SD RH VSL+VHPM QAL+AA HY+AD+++R+A+ G++PNG+
Sbjct: 528 SISQIYSKLEDIKVSAESDLRHHVSLVVHPMQQALNAALLHYEADIRKRNAR-GQKPNGY 586
Query: 2117 V 2119
V
Sbjct: 587 V 587
>ref|XP_002307021.1| transcription factor-related family protein [Populus trichocarpa]
gi|222856470|gb|EEE94017.1| transcription factor-related
family protein [Populus trichocarpa]
Length = 586
Score = 634 bits (1636), Expect = e-179
Identities = 341/595 (57%), Positives = 425/595 (71%), Gaps = 5/595 (0%)
Frame = +2
Query: 320 MADKQVVKRAKYKSSVKDPGVAGVLKLNIERFVFMPNDPKSTTKLNVDFKKIKGHKFTKE 499
MA QV KR KYKSSVKD G G L L +ER +F PN P S TKLN++F+ IK H++TKE
Sbjct: 1 MASGQVSKRVKYKSSVKDAGTPGRLFLTLERLMFKPNSPNSATKLNMEFRFIKNHRYTKE 60
Query: 500 GSSKQALLNLTQDQGGNFIFEFDSFADRDVCREYVANAIAFHAEAGRAMPEASVAPLNNE 679
GS+K +LNLT QG N+IFEF+S+ D VC+E V A++ E + + + V +E
Sbjct: 61 GSNKAPMLNLTSSQGMNYIFEFESYDDLHVCKECVGKALSKTGETPKPVDTSEVP---SE 117
Query: 680 QLSRAETERRIKLLQENSELQKLHKQFVFGNILTDAEFWATRKKLLDKNDSRTPKQRLAL 859
Q S E R+ +L+ENSELQKLHK+FV +LT+AEFWATRKKLL N S+ KQR L
Sbjct: 118 QPSTEELLSRMNMLRENSELQKLHKRFVSDGVLTEAEFWATRKKLLGGNTSKKSKQRTGL 177
Query: 860 KNEMWT-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLSFVPNKMSEKEFWTKYS 1036
K+ M + KP +DG++N+VTF LTPEI+ +IFAEKPAV QAYL+ VP KMSE++FW+KY
Sbjct: 178 KSVMLSDTKPSTDGRTNKVTFTLTPEIVREIFAEKPAVHQAYLTLVPKKMSERDFWSKYC 237
Query: 1037 RAEYLHSTRNV---VXXXXXXXXXXXXXVFLKRDDMLASEARRKIRRVDPTVDMEADKGD 1207
RAEYL +N +FLK D++LASE R KIR VDPT+DMEAD+GD
Sbjct: 238 RAEYLQHAKNANAAAAAAAEAAEDEELALFLKPDNILASETRWKIRGVDPTLDMEADEGD 297
Query: 1208 DYIHLPDHGLPNDEVKDVLEAHYEPYRRSFSQDLNQHAAVVLQGRVVDVE-LGDTRSVAE 1384
DY HLPDHG+ D K++ E +E RR+ SQDLN+HAAVVLQG +D E L DT++VAE
Sbjct: 298 DYTHLPDHGIVRDGSKEITELQHELCRRTLSQDLNRHAAVVLQGTPIDEEQLKDTQTVAE 357
Query: 1385 ALSRSKQAELSNEISNRNLERELSDRISKMAEIEDLQGPQDPAVAPLSIKDPRDYFDSQQ 1564
AL RSKQ N +R L R L KM EI+DLQ D +APLSIKDPRDYFDSQQ
Sbjct: 358 ALERSKQEADINANQDR-LSRNL-----KMMEIDDLQASIDLPLAPLSIKDPRDYFDSQQ 411
Query: 1565 ANALKALGDTGSGAKPLKSSVSSHEAYGSLRDLISDIRGTGLSEPIMNQEVALKVLGSLT 1744
A+ALK DT G P++ ++S E+Y SLRD IS I+ TGL +P++ EVA KVL LT
Sbjct: 412 ASALKTSRDTSIGNDPVRCTLSVEESYASLRDSISHIKNTGLVDPMVTPEVAAKVLLVLT 471
Query: 1745 QNISSTKFNLGNNPHESVLDGLPKVTKEELLHHWTSVQELLKHFWSSYPITTKYLYTKVT 1924
NISSTK++LG NP SVLD LP KEEL++HWTS+QELL+H+WSSYPITT YLY KV+
Sbjct: 472 HNISSTKYDLGKNPGLSVLDTLPNSIKEELMYHWTSLQELLRHYWSSYPITTMYLYNKVS 531
Query: 1925 RLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSA 2089
RLKDAMS++ +LQE+KESVQSD RHQV+LL+ PM QAL+ A HYDAD+Q+RS+
Sbjct: 532 RLKDAMSKIDSQLQELKESVQSDLRHQVTLLIRPMQQALEVAMQHYDADMQKRSS 586
>gb|EMJ24087.1| hypothetical protein PRUPE_ppa003591mg [Prunus persica]
Length = 563
Score = 634 bits (1634), Expect = e-179
Identities = 341/600 (56%), Positives = 416/600 (69%), Gaps = 2/600 (0%)
Frame = +2
Query: 320 MADKQVVKRAKYKSSVKDPGVAGVLKLNIERFVFMPNDPKSTTKLNVDFKKIKGHKFTKE 499
M+ +QVVKRA YKS +KDPG GVL + +FVF PNDP S KL+V+FK I G+ K
Sbjct: 1 MSCRQVVKRASYKSKIKDPGTPGVLTMTENKFVFRPNDPSSAAKLDVEFKHITGNALAKS 60
Query: 500 GSSKQALLNLTQDQGGNFIFEFDSFADRDVCREYVANAIAFHAEAGRAMPEASVAPLNNE 679
G + +A ++ A A + E S L +E
Sbjct: 61 GEAAKA------------------------------SSAAKPTSAAKTTSEKSGVTLPDE 90
Query: 680 QLSRAETERRIKLLQENSELQKLHKQFVFGNILTDAEFWATRKKLLDKNDSRTPKQRLAL 859
QLS AE + R+KLLQE+SELQKLH QFV +LT++EFWATRKKLLD + KQR+
Sbjct: 91 QLSTAEMQLRMKLLQEDSELQKLHMQFVISGVLTESEFWATRKKLLDGDSRTKSKQRVGF 150
Query: 860 KNEM-WTVKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLSFVPNKMSEKEFWTKYS 1036
++ M KP++DG+ N+VTFNLTPEI +QIFA KPAV QA+L+ VP+KM+EK+FWTKY
Sbjct: 151 RSSMILDTKPMTDGRMNKVTFNLTPEIKYQIFALKPAVHQAFLTLVPSKMTEKDFWTKYF 210
Query: 1037 RAEYLHSTRNVVXXXXXXXXXXXXXVFLKRDDMLASEARRKIRRVDPTVDMEADKGDDYI 1216
RAEYLHSTRN V +FLK D +LASEARRKIRRVDPT+DMEAD+GDDY
Sbjct: 211 RAEYLHSTRNAVAAAAEAAEDEELAIFLKEDAILASEARRKIRRVDPTLDMEADQGDDYT 270
Query: 1217 HLPDHGLPNDEVKDVLEAHYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALSR 1396
HLPDHG+ D KDV E E YRR+ SQDLN+ AVVLQGR VDV+L D R+VAEAL +
Sbjct: 271 HLPDHGIFRDGSKDVTELQNELYRRTLSQDLNRQGAVVLQGRTVDVDLEDPRTVAEALMQ 330
Query: 1397 SKQAELSNEISNRNLERELSDRISKMAEIEDLQGPQDPAVAPLSIKDPRDYFDSQQANAL 1576
S++ S+ + E+E DRI++M EIEDLQ D VA L IKDPRDYFD+QQ NAL
Sbjct: 331 SRRE------SDESAEQERLDRITRMTEIEDLQEHHDHPVAQLCIKDPRDYFDTQQVNAL 384
Query: 1577 KALGDTGSGAKPLKSSVSSHEAYGSLRDLISDIRGTGLSEPIMNQEVALKVLGSLTQNIS 1756
K L D+ +G + K S+++ EAYGSLR+ IS I+ GL + E+A+ VL LTQNIS
Sbjct: 385 KTLDDSRTGTEQKKCSLTTEEAYGSLREAISKIKSIGLKNSTVAPEIAITVLNGLTQNIS 444
Query: 1757 STKFNLGNNPHESVLDGLPKVTKEELLHHWTSVQELLKHFWSSYPITTKYLYTKVTRLKD 1936
STK+ LG NP +SVLD LP TKEELLHHW S+QELL+HFWSSYPITT YL TKV RLKD
Sbjct: 445 STKYQLGKNPQDSVLDSLPNKTKEELLHHWISIQELLRHFWSSYPITTTYLSTKVGRLKD 504
Query: 1937 AMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSAKS-GERPNG 2113
AMSQ+Y +L+EIK QSDFRHQVSLLV PM QALDAAF H+DAD+Q+R+A+S GE PNG
Sbjct: 505 AMSQIYRQLEEIK---QSDFRHQVSLLVRPMHQALDAAFQHFDADLQKRAARSGGETPNG 561