BLASTX nr result
ID: Rehmannia26_contig00012416
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00012416
(1034 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein A... 159 1e-36
ref|XP_004309966.1| PREDICTED: putative ribonuclease H protein A... 155 2e-35
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A... 154 5e-35
ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein A... 152 2e-34
gb|EMJ14652.1| hypothetical protein PRUPE_ppa024777mg, partial [... 147 5e-33
ref|XP_004304923.1| PREDICTED: putative ribonuclease H protein A... 137 7e-30
gb|EXB74531.1| hypothetical protein L484_026228 [Morus notabilis] 133 1e-28
ref|XP_004308354.1| PREDICTED: putative ribonuclease H protein A... 132 3e-28
ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein A... 130 1e-27
ref|XP_004301067.1| PREDICTED: uncharacterized protein LOC101309... 129 1e-27
ref|YP_008992319.1| hypothetical protein Salmi_Mp055 (mitochondr... 125 2e-26
ref|XP_004289115.1| PREDICTED: putative ribonuclease H protein A... 122 3e-25
ref|XP_004289281.1| PREDICTED: putative ribonuclease H protein A... 119 3e-24
gb|AGV40503.1| hypothetical protein [Phaseolus vulgaris] 117 1e-23
ref|XP_004305144.1| PREDICTED: putative ribonuclease H protein A... 115 4e-23
ref|XP_004308308.1| PREDICTED: uncharacterized protein LOC101295... 110 7e-22
ref|XP_004304990.1| PREDICTED: putative ribonuclease H protein A... 105 2e-20
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas... 104 5e-20
gb|ABD28730.1| Ribonuclease H [Medicago truncatula] 102 2e-19
ref|XP_002516681.1| conserved hypothetical protein [Ricinus comm... 102 2e-19
>ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 197
Score = 159 bits (403), Expect = 1e-36
Identities = 83/195 (42%), Positives = 113/195 (57%), Gaps = 3/195 (1%)
Frame = -2
Query: 760 MQNTQEDLLCLHRLKVSGRPPKAPRIIPVPWFLPLPGWIKVNVDGSAIGAPGRITAAGIF 581
M+NT +L LHR+ + GRP KAP+I+ V W +P +K+N DG+A G+PG GIF
Sbjct: 1 MKNTVGELCILHRIGIKGRPSKAPKIVEVMWHVPSIYQVKLNTDGAARGSPGLAGFGGIF 60
Query: 580 RTYRGFFRGCFVEQCGTGFAFEAELVAAMTAIFYAFRKGWTNIWLESDSTYVVGLLRSQT 401
R + G GCF G A EAEL + AI A ++GW ++W+ESDST V+ L S
Sbjct: 61 RDHLGHVLGCFSGNLGIANALEAELQTVIHAIQMASQRGWHSLWIESDSTLVIHFLSSFQ 120
Query: 400 GSIPWRLLNQWRYSLFLLSQMHVVVSHIYREGNRVADHLSKFTCDSS---WWDAPPMDII 230
+PWR +W +L+ M V VSHIYREGN +AD L+ F D++ WWD+ P I
Sbjct: 121 VDVPWRFTTEWFNCRTILTTMTVKVSHIYREGNSIADCLANFGADNAGVHWWDSCPPCAI 180
Query: 229 SLLTDDYVGRTQYRF 185
+ + D G Y F
Sbjct: 181 TAYSRDLAGFPNYCF 195
>ref|XP_004309966.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 197
Score = 155 bits (393), Expect = 2e-35
Identities = 83/195 (42%), Positives = 112/195 (57%), Gaps = 3/195 (1%)
Frame = -2
Query: 760 MQNTQEDLLCLHRLKVSGRPPKAPRIIPVPWFLPLPGWIKVNVDGSAIGAPGRITAAGIF 581
M+NT +L LHR+ + GRP K P+I+ V W + +K+N DG+A G+PG GIF
Sbjct: 1 MKNTVGELCILHRIGIKGRPSKVPKIVEVMWHVLSIYQVKLNTDGAARGSPGLAGFGGIF 60
Query: 580 RTYRGFFRGCFVEQCGTGFAFEAELVAAMTAIFYAFRKGWTNIWLESDSTYVVGLLRSQT 401
R + G CF G A EAEL A + AI A ++GW ++W+ESDST V+ L S
Sbjct: 61 RDHLGQVLCCFSGNLGIATALEAELQAVIHAIQMASQRGWRSLWIESDSTLVIHFLSSFQ 120
Query: 400 GSIPWRLLNQWRYSLFLLSQMHVVVSHIYREGNRVADHLSKFTCDSS---WWDAPPMDII 230
+PWR +W +L+ M V VSHIYREGNRVAD L+ F D++ WWD+ P I
Sbjct: 121 VDVPWRFTTEWFNCRTILTSMTVKVSHIYREGNRVADCLANFGADNAGVHWWDSYPPCAI 180
Query: 229 SLLTDDYVGRTQYRF 185
+ + D YRF
Sbjct: 181 TAYSRDLADFPNYRF 195
>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 872
Score = 154 bits (389), Expect = 5e-35
Identities = 87/251 (34%), Positives = 127/251 (50%), Gaps = 3/251 (1%)
Frame = -2
Query: 928 SAQIAFLWRVAIVSCIWLIWHIRNDVIFNHKHWTTDAALVQLRAMIIESASLDKGCMQNT 749
S Q+ LW + S +W IWH RN + F+ + ++ + I S+ L G M NT
Sbjct: 622 SPQLKELWLICFTSILWYIWHARNQIRFDSRTFSVAGVCRLVSRHIQASSRLATGHMHNT 681
Query: 748 QEDLLCLHRLKVSGRPPKAPRIIPVPWFLPLPGWIKVNVDGSAIGAPGRITAAGIFRTYR 569
DL L R + PR++ V W P GWIK+N DG+ G +FR Y+
Sbjct: 682 IHDLCILKSFGACCRSRRIPRMVEVIWHPPSIGWIKINSDGAWKHEEGIGGFGAVFRYYK 741
Query: 568 GFFRGCFVEQCGTGFAFEAELVAAMTAIFYAFRKGWTNIWLESDSTYVVGLLRSQTGSIP 389
G F G F + A+++ +TAI A+ + W ++WLE D + V+ +RS + +P
Sbjct: 742 GQFVGAFASHIDIPSSIAAKVMVVITAIELAWVRDWKHVWLEVDFSTVLDYIRSPS-LVP 800
Query: 388 WRLLNQWRYSLFLLSQMHVVVSHIYREGNRVADHLSKFTCDSS---WWDAPPMDIISLLT 218
W+L +W L+ +S M SHI+REGNRVAD L+ S WWD PP I+S
Sbjct: 801 WQLRVRWLNCLYRISTMTFKSSHIFREGNRVADALANHGTSMSEEVWWDVPPSFILSYYE 860
Query: 217 DDYVGRTQYRF 185
D +G +RF
Sbjct: 861 RDLLGMPNFRF 871
>ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 364
Score = 152 bits (384), Expect = 2e-34
Identities = 94/270 (34%), Positives = 136/270 (50%), Gaps = 6/270 (2%)
Frame = -2
Query: 1033 FAGALWDWIAGSFAVAFRNVYSFNDFMVHLMEFHF---SAQIAFLWRVAIVSCIWLIWHI 863
FA +LW+ AG F + +V L+ + S Q+ +W + + +W IW
Sbjct: 94 FAASLWNNRAGLFELG-----CLPQNLVDLLYYGGVGRSHQLKEIWLICYTTTLWFIWKA 148
Query: 862 RNDVIFNHKHWTTDAALVQLRAMIIESASLDKGCMQNTQEDLLCLHRLKVSGRPPKAPRI 683
RN + ++ DA + + ++ L GCM N+ +L L + + RP +APRI
Sbjct: 149 RNKMRHDNCTIVVDAVRQLIMGHVKTASKLALGCMSNSLTELRVLKKFGLLCRPHRAPRI 208
Query: 682 IPVPWFLPLPGWIKVNVDGSAIGAPGRITAAGIFRTYRGFFRGCFVEQCGTGFAFEAELV 503
V W PL GWIKVN DG+ G+ GIFR + G F G F + +AE++
Sbjct: 209 TEVNWHPPLFGWIKVNTDGAWQKTTGKSGYGGIFRDFHGSFLGAFASNLEILNSVDAEVM 268
Query: 502 AAMTAIFYAFRKGWTNIWLESDSTYVVGLLRSQTGSIPWRLLNQWRYSLFLLSQMHVVVS 323
A + AI A+ + W +IWLE DS V+ L+ +PWRL W L +SQM+ S
Sbjct: 269 AVIQAIELAWVRDWEHIWLEVDSIIVLNFLQ-DPHLVPWRLRVGWGNFLHRISQMNFRSS 327
Query: 322 HIYREGNRVADHLSKFTCDS---SWWDAPP 242
HI+REGN+VAD L+ SWWD PP
Sbjct: 328 HIFREGNQVADALANMGLSMSALSWWDEPP 357
>gb|EMJ14652.1| hypothetical protein PRUPE_ppa024777mg, partial [Prunus persica]
Length = 465
Score = 147 bits (372), Expect = 5e-33
Identities = 84/248 (33%), Positives = 122/248 (49%), Gaps = 3/248 (1%)
Frame = -2
Query: 934 HFSAQIAFLWRVAIVSCIWLIWHIRNDVIFNHKHWTTDAALVQLRAMIIESASLDKGCMQ 755
HFS Q+ LW + + +WLIW +RN + F K T + + + S+ L +G +
Sbjct: 218 HFSPQLMDLWLLMFRTIVWLIWDLRNKLRFEEKVSTVSSNCRTIINHVPASSPLARGHIL 277
Query: 754 NTQEDLLCLHRLKVSGRPPKAPRIIPVPWFLPLPGWIKVNVDGSAIGAPGRITAAGIFRT 575
N DL + + V RP +I+ V W P G++K+ +DG+ G+ + G+FR
Sbjct: 278 NKVHDLCIIRSIGVHYRPRPNSKIVEVTWHPPCFGFVKIKIDGACKRDSGKAGSGGVFRN 337
Query: 574 YRGFFRGCFVEQCGTGFAFEAELVAAMTAIFYAFRKGWTNIWLESDSTYVVGLLRSQTGS 395
Y+G G F AE++A + AI A+ W NIW+E+DS V RS
Sbjct: 338 YQGHVLGAFSANLDVPSGVHAEVLAVIKAIELAWLHAWHNIWIETDSLLVTKFFRS-PHL 396
Query: 394 IPWRLLNQWRYSLFLLSQMHVVVSHIYREGNRVADHLSKFTCDSS---WWDAPPMDIISL 224
+PWRL W+ L L M +SHI+REGN D L+ S WWD P I +L
Sbjct: 397 VPWRLRVDWQNCLLRLQHMSFKISHIFREGNHDVDALANHGALGSGLTWWDTAPSFIFAL 456
Query: 223 LTDDYVGR 200
L+ VGR
Sbjct: 457 LSAGLVGR 464
>ref|XP_004304923.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 209
Score = 137 bits (345), Expect = 7e-30
Identities = 78/189 (41%), Positives = 100/189 (52%), Gaps = 3/189 (1%)
Frame = -2
Query: 742 DLLCLHRLKVSGRPPKAPRIIPVPWFLPLPGWIKVNVDGSAIGAPGRITAAGIFRTYRGF 563
D L L V+ + KAPRI V W P WIKVN DG A G P G+FR G
Sbjct: 20 DARLLAFLGVAPKGGKAPRIQHVLWQPPFFPWIKVNTDGLAKGNPSPAACGGVFRDASGG 79
Query: 562 FRGCFVEQCGTGFAFEAELVAAMTAIFYAFRKGWTNIWLESDSTYVVGLLRSQTGSIPWR 383
F G F + G +F +EL A + AI A KGW +WLESDS VV S++ S PW
Sbjct: 80 FLGSFCQSLGWKTSFYSELYAVILAIEIAHDKGWVYLWLESDSVSVVACFSSKSFSPPWN 139
Query: 382 LLNQWRYSLFLLSQMHVVVSHIYREGNRVADHLSKF---TCDSSWWDAPPMDIISLLTDD 212
L +W L ++ QM+ SHI+REGN VAD ++ +W+D PP ++ L D
Sbjct: 140 LRVRWNNCLSIIRQMNFRCSHIFREGNMVADKMANLGLSNASFTWYDNPPTELHGFLQAD 199
Query: 211 YVGRTQYRF 185
Y+G YRF
Sbjct: 200 YLGIPNYRF 208
>gb|EXB74531.1| hypothetical protein L484_026228 [Morus notabilis]
Length = 203
Score = 133 bits (335), Expect = 1e-28
Identities = 71/173 (41%), Positives = 96/173 (55%), Gaps = 3/173 (1%)
Frame = -2
Query: 766 GCMQNTQEDLLCLHRLKVSGRPPKAPRIIPVPWFLPLPGWIKVNVDGSAIGAPGRITAAG 587
G N+ ++ L++L V P++P+I V W P GW+KVN+D SA GA I G
Sbjct: 31 GYSYNSAFEIRILNKLYVRQNFPRSPKIFLVYWIPPPSGWVKVNIDSSAKGALDPIACGG 90
Query: 586 IFRTYRGFFRGCFVEQCGTGFAFEAELVAAMTAIFYAFRKGWTNIWLESDSTYVVGLLRS 407
IFR RGF CF G GFAFEAEL A + AI F GW +WLESDS+ ++ LL
Sbjct: 91 IFRNARGFVCDCFSVFLGNGFAFEAELWAVINAISITFENGWHKLWLESDSSLIICLLSF 150
Query: 406 QTGSIPWRLLNQWRYSLFLLSQMHVVVSHIYREGNRVADHLSK---FTCDSSW 257
+ + W+L N+W ++ L +M SH+YRE N AD L+ C+ W
Sbjct: 151 KFLQVSWKLRNEWSRAVSLSIRMDFHFSHVYREINGCADKLANLGIINCNRMW 203
>ref|XP_004308354.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 235
Score = 132 bits (331), Expect = 3e-28
Identities = 82/233 (35%), Positives = 115/233 (49%), Gaps = 3/233 (1%)
Frame = -2
Query: 874 IWHIRNDVIFNHKHWTTDAALVQLRAMIIESASLDKGCMQNTQEDLLCLHRLKVSGRPPK 695
+W RN + F+++ + A I + + G + + L L L V+ + K
Sbjct: 3 LWKARNKLRFDNRPPNFYTMCCSIMAWIRQISLFAPGHYKGVLDARL-LASLGVASKGGK 61
Query: 694 APRIIPVPWFLPLPGWIKVNVDGSAIGAPGRITAAGIFRTYRGFFRGCFVEQCGTGFAFE 515
APRI V W P WIKVN +G A G PG G+FR G F G F G +F
Sbjct: 62 APRIQHVLWQPPFFPWIKVNTNGLAKGNPGPAACGGVFRDASGGFLGSFCHSLGWKTSFY 121
Query: 514 AELVAAMTAIFYAFRKGWTNIWLESDSTYVVGLLRSQTGSIPWRLLNQWRYSLFLLSQMH 335
+EL + AI A KGW +WLESDS VV S++ S W L +W L ++ QM+
Sbjct: 122 SELYVVILAIEIAHDKGWVYLWLESDSVSVVACFSSRSFSPTWNLRVRWNNCLLIIRQMN 181
Query: 334 VVVSHIYREGNRVADHLSKFTCDS---SWWDAPPMDIISLLTDDYVGRTQYRF 185
SHI+REGN VAD ++ + +W+D P ++ L DY+G YRF
Sbjct: 182 FRYSHIFREGNIVADKMANLGLSNVSFTWYDNPLTELHGFLQADYLGIPNYRF 234
>ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 409
Score = 130 bits (326), Expect = 1e-27
Identities = 84/251 (33%), Positives = 118/251 (47%), Gaps = 3/251 (1%)
Frame = -2
Query: 928 SAQIAFLWRVAIVSCIWLIWHIRNDVIFNHKHWTTDAALVQLRAMIIESASLDKGCMQNT 749
S Q+ +W + + +W I RN + ++ DA + + + L GCM N+
Sbjct: 159 SHQLKEIWLICYTTTLWFIGKARNKIRHDNCTIVVDAVHQLIMGHVKAVSKLASGCMSNS 218
Query: 748 QEDLLCLHRLKVSGRPPKAPRIIPVPWFLPLPGWIKVNVDGSAIGAPGRITAAGIFRTYR 569
L L + + P +A RI V W PL GWIKVN DG+ G+ GIFR +
Sbjct: 219 LTKLRVLKKFGLLCHPCQALRITKVNWHPPLFGWIKVNTDGAWQKTTGKSGYGGIFRDFH 278
Query: 568 GFFRGCFVEQCGTGFAFEAELVAAMTAIFYAFRKGWTNIWLESDSTYVVGLLRSQTGSIP 389
G F G F + +AE++A + AI A+ + W +I LE DS V+ L +P
Sbjct: 279 GSFLGAFASNLEIPNSVDAEVMAVIQAIELAWVRDWKHILLEVDSAIVLNFLH-DPHLVP 337
Query: 388 WRLLNQWRYSLFLLSQMHVVVSHIYREGNRVADHLSKFTCDS---SWWDAPPMDIISLLT 218
WRL L +SQM+ SHI+REGN+VAD L SWWD PP I +
Sbjct: 338 WRLRVACGNCLHRISQMNFRSSHIFREGNQVADTLVNMGLSMFALSWWDEPPHFIQGMYQ 397
Query: 217 DDYVGRTQYRF 185
D G + F
Sbjct: 398 RDKFGILNFCF 408
>ref|XP_004301067.1| PREDICTED: uncharacterized protein LOC101309260 [Fragaria vesca
subsp. vesca]
Length = 209
Score = 129 bits (325), Expect = 1e-27
Identities = 77/205 (37%), Positives = 112/205 (54%), Gaps = 4/205 (1%)
Frame = -2
Query: 784 SASLDKGCMQNTQEDLLCLHRLKVSGRPPKAPRIIPVPWFLPLPGWIKVNVDGSAIGAPG 605
S+ L GCM N+ +L L V + +APRII V W PL IK+N +G+ A G
Sbjct: 7 SSFLASGCMNNSVSELCVLKCFDVPCKSRRAPRIIEVNWIPPLFDCIKINTNGAFNHASG 66
Query: 604 RITAAGIFRTYRGFFRGCFVEQCGTGF-AFEAELVAAMTAIFYAFRKGWTNIWLESDSTY 428
+ G+FR ++G F G F C +AE++A + AI A+ + W +IWLE DS
Sbjct: 67 KAGFRGVFRNFKGEFIGVFA--CNLDIPCSDAEVMAVIKAIDLAWVREWRHIWLEVDSAI 124
Query: 427 VVGLLRSQTGSIPWRLLNQWRYSLFLLSQMHVVVSHIYREGNRVADHLSKFTCDSS---W 257
V+ + S IPWR W ++ +SQM SHI+REGN+VAD L+ F SS +
Sbjct: 125 VLNFIHS-PHLIPWRFRVAWDNCMYRVSQMQFQCSHIFREGNQVADALANFDLSSSSLVY 183
Query: 256 WDAPPMDIISLLTDDYVGRTQYRFV 182
WD+ P +++L D +G +RF+
Sbjct: 184 WDSIPQFLMNLCLQDQLGLPHFRFL 208
>ref|YP_008992319.1| hypothetical protein Salmi_Mp055 (mitochondrion) [Salvia
miltiorrhiza] gi|534292292|gb|AGU16584.1| hypothetical
protein Salmi_Mp055 (mitochondrion) [Salvia
miltiorrhiza]
Length = 119
Score = 125 bits (315), Expect = 2e-26
Identities = 59/116 (50%), Positives = 80/116 (68%)
Frame = -2
Query: 529 GFAFEAELVAAMTAIFYAFRKGWTNIWLESDSTYVVGLLRSQTGSIPWRLLNQWRYSLFL 350
GFAFEAELV M A+ AF KGW ++W+ESDS YVV LLRS++ +PW N+W Y+L L
Sbjct: 2 GFAFEAELVGVMMAVDIAFSKGWHSLWIESDSIYVVSLLRSRSMIVPWNHRNRWLYTLHL 61
Query: 349 LSQMHVVVSHIYREGNRVADHLSKFTCDSSWWDAPPMDIISLLTDDYVGRTQYRFV 182
+ QM++VV+HI+REGN VAD L+ D WW++ P I S + D G + +RF+
Sbjct: 62 IRQMNIVVTHIFREGNHVADALANAAGDLKWWNSMPDFISSAVYRDIAGVSFFRFI 117
>ref|XP_004289115.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 210
Score = 122 bits (305), Expect = 3e-25
Identities = 72/204 (35%), Positives = 107/204 (52%), Gaps = 3/204 (1%)
Frame = -2
Query: 784 SASLDKGCMQNTQEDLLCLHRLKVSGRPPKAPRIIPVPWFLPLPGWIKVNVDGSAIGAPG 605
S+ L GCM N+ +L L V + +APRII V W PL IK+N DG+ G
Sbjct: 7 SSFLASGCMNNSISELCVLKCFDVPCKLRRAPRIIEVNWIPPLFDCIKINTDGAFNYDSG 66
Query: 604 RITAAGIFRTYRGFFRGCFVEQCGTGFAFEAELVAAMTAIFYAFRKGWTNIWLESDSTYV 425
+ G+FR ++G F G F + +AE++ + AI A+ + W +IWLE D V
Sbjct: 67 KAGFGGVFRNFKGEFIGAFACNLHIPCSVDAEVMVVIKAIELAWIREWKHIWLEVDFAIV 126
Query: 424 VGLLRSQTGSIPWRLLNQWRYSLFLLSQMHVVVSHIYREGNRVADHLSKFTCDSS---WW 254
+ + S +PWR W ++ +SQM SHI+REGN+VA L+ F SS +W
Sbjct: 127 LNFIHS-PHLVPWRFRVVWDNCMYRVSQMQFRCSHIFREGNQVAYALANFGLSSSGLVYW 185
Query: 253 DAPPMDIISLLTDDYVGRTQYRFV 182
D+ P ++L D +G +RF+
Sbjct: 186 DSIPQFFMNLYLQDQLGLPHFRFL 209
>ref|XP_004289281.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 215
Score = 119 bits (297), Expect = 3e-24
Identities = 71/177 (40%), Positives = 91/177 (51%), Gaps = 4/177 (2%)
Frame = -2
Query: 721 LKVSGRPPKAP-RIIPVPWFLPLPGWIKVNVDGSAIGAPGRITAAGIFRTYRGFFRGCFV 545
+K+ P +A RI V W PL WIK+N DG A G PG T G+FR Y+G F G F
Sbjct: 32 VKMGVTPSRAQKRIRLVLWHPPLSPWIKLNTDGLAKGNPGPATCGGVFRDYQGHFIGGFS 91
Query: 544 EQCGTGFAFEAELVAAMTAIFYAFRKGWTNIWLESDSTYVVGLLRSQTGSIPWRLLNQWR 365
G F +EL+A + I AF+ GW ++WLE DST VV + PW+L W
Sbjct: 92 TPIGHHNDFFSELLAVIIGIELAFQLGWQHVWLECDSTSVVECFSKSSFVPPWQLRTLWY 151
Query: 364 YSLFLLSQMHVVVSHIYREGNRVADHLSKFTCDSS---WWDAPPMDIISLLTDDYVG 203
+ M SH+ REGN VAD L SS W +PP +II L D++G
Sbjct: 152 NCVARTRSMSFFCSHVLREGNIVADRLVNLGMSSSSWIWHASPPAEIIHFLRMDFLG 208
>gb|AGV40503.1| hypothetical protein [Phaseolus vulgaris]
Length = 234
Score = 117 bits (292), Expect = 1e-23
Identities = 68/199 (34%), Positives = 97/199 (48%)
Frame = -2
Query: 877 LIWHIRNDVIFNHKHWTTDAALVQLRAMIIESASLDKGCMQNTQEDLLCLHRLKVSGRPP 698
+IW +RN F K + A + ++ + + K M+N D + + R
Sbjct: 1 MIWRMRNYARFQDKIGVSKAISI-IKDLTCLVGNSSKASMKNDMLDFNVIKFFGIKTRSG 59
Query: 697 KAPRIIPVPWFLPLPGWIKVNVDGSAIGAPGRITAAGIFRTYRGFFRGCFVEQCGTGFAF 518
K R +P+ W P PGW+K+N DG+A G PG T GIFR G F G F A
Sbjct: 60 KVLRPLPIRWEFPSPGWVKINTDGAARGYPGLATCGGIFRGSMGEFIGAFSAFLEVQTAL 119
Query: 517 EAELVAAMTAIFYAFRKGWTNIWLESDSTYVVGLLRSQTGSIPWRLLNQWRYSLFLLSQM 338
AE + A+ A + G TN+WLE DS V ++T ++PW L N+W L +
Sbjct: 120 VAEFYGVIHAMEEAQKMGLTNVWLECDSALVCAAFTART-NVPWMLQNRWNTCLNFCGTI 178
Query: 337 HVVVSHIYREGNRVADHLS 281
V+HI+REGN AD L+
Sbjct: 179 RFRVTHIFREGNACADKLA 197
>ref|XP_004305144.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 183
Score = 115 bits (287), Expect = 4e-23
Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)
Frame = -2
Query: 676 VPWFLPLPGWIKVNVDGSAIGAPGRITAAGIFRTYRGFFRGCFVEQCGTGFAFEAELVAA 497
V W PL WIK+N DG A G G G+FR Y+G F G F G AF +EL+A
Sbjct: 16 VLWHPPLSPWIKLNTDGLAKGNSGPAACGGVFRDYQGHFIGGFSTPIGHHNAFFSELLAV 75
Query: 496 MTAIFYAFRKGWTNIWLESDSTYVVGLLRSQTGSIPWRLLNQWRYSLFLLSQMHVVVSHI 317
+ I F+ GW ++WLE DST VV + PW+L W + M SH+
Sbjct: 76 IIGIELTFQLGWQHVWLECDSTSVVECFSKSSFVPPWQLRTLWYNCAARIRSMSFFCSHV 135
Query: 316 YREGNRVADHLSKFTCDSS---WWDAPPMDIISLLTDDYVG 203
REGN VAD L+ SS W +PP +II L D++G
Sbjct: 136 LREGNTVADRLANLGMSSSSWIWHASPPAEIIPFLRMDFLG 176
>ref|XP_004308308.1| PREDICTED: uncharacterized protein LOC101295087 [Fragaria vesca
subsp. vesca]
Length = 227
Score = 110 bits (276), Expect = 7e-22
Identities = 62/183 (33%), Positives = 92/183 (50%)
Frame = -2
Query: 928 SAQIAFLWRVAIVSCIWLIWHIRNDVIFNHKHWTTDAALVQLRAMIIESASLDKGCMQNT 749
S Q+ LW A V ++ IW RN F+ A + ++ S + CM N
Sbjct: 24 SPQLRELWLTAFVVTLYCIWKFRNQARFDGVQPNVSKACNLIFGQVVASNKISSSCMNNG 83
Query: 748 QEDLLCLHRLKVSGRPPKAPRIIPVPWFLPLPGWIKVNVDGSAIGAPGRITAAGIFRTYR 569
L L ++ V +P KAP I+ V W PL GW+KVN DG+ + G+ GIFR +R
Sbjct: 84 VFYLSILKKVGVPCKPSKAPCIVEVNWHPPLFGWVKVNTDGAWRSSSGQAGYGGIFRDFR 143
Query: 568 GFFRGCFVEQCGTGFAFEAELVAAMTAIFYAFRKGWTNIWLESDSTYVVGLLRSQTGSIP 389
G G F + AE++A + AI ++ + W ++WLE DS+ V+ LRS +P
Sbjct: 144 GGVLGVFCSNFNMASSVAAEVMAVIKAIELSWVRDWKHVWLEVDSSLVITFLRS-PHLVP 202
Query: 388 WRL 380
W+L
Sbjct: 203 WKL 205
>ref|XP_004304990.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 202
Score = 105 bits (263), Expect = 2e-20
Identities = 66/195 (33%), Positives = 98/195 (50%)
Frame = -2
Query: 865 IRNDVIFNHKHWTTDAALVQLRAMIIESASLDKGCMQNTQEDLLCLHRLKVSGRPPKAPR 686
IR D+ + W ++ I + + G M N +DL + R +APR
Sbjct: 4 IRPDLTISRSLWLQ--FVISFWGYIRAAGWIANGPMHNLVQDLQIIKSFGAECRLGRAPR 61
Query: 685 IIPVPWFLPLPGWIKVNVDGSAIGAPGRITAAGIFRTYRGFFRGCFVEQCGTGFAFEAEL 506
+I V W P+ GW+K+N DG+ A G IFR ++ G F + AE+
Sbjct: 62 VIEVVWHPPVIGWVKINSDGAWKHAEGVGGFGAIFRDFKCHVLGAFSSNIDIPSSVAAEV 121
Query: 505 VAAMTAIFYAFRKGWTNIWLESDSTYVVGLLRSQTGSIPWRLLNQWRYSLFLLSQMHVVV 326
+A + AI A+ + W +IWLE DS+ V+ LRS +PW L +W L +S+M
Sbjct: 122 IAVIVAIELAWVRDWKHIWLEVDSSLVLDYLRSPL-LVPWHLRVRWLNCLRCISKMIFRS 180
Query: 325 SHIYREGNRVADHLS 281
SHI+REGN+VAD L+
Sbjct: 181 SHIFREGNKVADALA 195
>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
Endonuclease/exonuclease/phosphatase [Medicago
truncatula]
Length = 1246
Score = 104 bits (260), Expect = 5e-20
Identities = 72/215 (33%), Positives = 106/215 (49%), Gaps = 4/215 (1%)
Frame = -2
Query: 865 IRNDVIFNHKHWTTDAALVQLRAMIIESASLDKG-CMQNTQEDLLCLHRLKVSGRPPKAP 689
+RN F + + +A ++ ++I S ++ G C+ + D L VS R K
Sbjct: 952 LRNAFRFQSQLQSIQSAKARIHSLIAMSGNVSTGKCLHS---DSAILEEFSVSPRHRKYK 1008
Query: 688 RIIPVPWFLPLPGWIKVNVDGSAIGAPGRITAAGIFRTYRGFFRGCFVEQCGTGFAFEAE 509
II V W P P +KVN DGS +G G G+FR G F G F G F AE
Sbjct: 1009 DIILVLWKNPSPPLLKVNTDGSVVG--GLAACGGLFRDSSGSFLGAFSCNIGLASVFHAE 1066
Query: 508 LVAAMTAIFYAFRKGWTNIWLESDSTYVVGLLRSQTGSIPWRLLNQWRYSLFLLSQMHVV 329
+A + A+ +A GW N+WLESDST + ++ S + + W L N+W + L + V+
Sbjct: 1067 TLAFILALEHAAHHGWRNLWLESDSTSAL-MIFSNSSLVQWLLRNRWHNAQRL--GIQVI 1123
Query: 328 VSHIYREGNRVADHLSKF---TCDSSWWDAPPMDI 233
SHI EGNR AD+L+ S W + P ++
Sbjct: 1124 SSHILHEGNRCADNLANMGHGIQGSIWLETLPTEL 1158
>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
Length = 409
Score = 102 bits (254), Expect = 2e-19
Identities = 78/271 (28%), Positives = 121/271 (44%), Gaps = 6/271 (2%)
Frame = -2
Query: 1021 LWDWI--AGSFAVAFRNVYSFNDFMVHLMEFHFSAQIAFLWRVAIVSCIWLIWHIRNDVI 848
LWDW+ A + F ++ + + + H+M AIV +W IW N+
Sbjct: 137 LWDWLLKATDQHLDFSSILNISRMVQHVMNS------------AIVHIMWSIWLECNNKY 184
Query: 847 FNHKHWTTDAALVQLRAMIIE-SASLDKGCMQNTQEDLLCLHRLKVSGRPPKAPRIIP-- 677
F+ + A ++ S LD ++ +D + P K R+ P
Sbjct: 185 FDGVQKPMSTLFNTILAEVLRLSFMLDIVKGASSMQDFKLARLFSI---PFKTNRVNPCR 241
Query: 676 -VPWFLPLPGWIKVNVDGSAIGAPGRITAAGIFRTYRGFFRGCFVEQCGTGFAFEAELVA 500
+ W P G +K+N DGS +G+P + IFR + F G F + G A EAE A
Sbjct: 242 EIIWVPPHGGCMKINCDGSVVGSPSCGSIGVIFRASQTMFCGAFAQNIGYATALEAEYSA 301
Query: 499 AMTAIFYAFRKGWTNIWLESDSTYVVGLLRSQTGSIPWRLLNQWRYSLFLLSQMHVVVSH 320
M AI A TNIW+E+DS V+ TG +PW++ +W L + + +H
Sbjct: 302 CMFAIEKAKELHLTNIWIETDSVNVIRAFHFNTG-VPWKMHIRWHNCLLFCRSIRSLCTH 360
Query: 319 IYREGNRVADHLSKFTCDSSWWDAPPMDIIS 227
+ REGN VAD L+K + + + P+ IS
Sbjct: 361 VNREGNLVADALAKNGQGLALYSSHPLAFIS 391
>ref|XP_002516681.1| conserved hypothetical protein [Ricinus communis]
gi|223544176|gb|EEF45700.1| conserved hypothetical
protein [Ricinus communis]
Length = 180
Score = 102 bits (254), Expect = 2e-19
Identities = 57/144 (39%), Positives = 78/144 (54%)
Frame = -2
Query: 721 LKVSGRPPKAPRIIPVPWFLPLPGWIKVNVDGSAIGAPGRITAAGIFRTYRGFFRGCFVE 542
L ++G P + P ++ V VN DGSA+GA G A G+FR G+ G F
Sbjct: 34 LGINGSPRRTPAVMFV-----------VNTDGSALGALGPAGAGGLFRNPSGYVMGAFAF 82
Query: 541 QCGTGFAFEAELVAAMTAIFYAFRKGWTNIWLESDSTYVVGLLRSQTGSIPWRLLNQWRY 362
GT AF EL +A A+ A+ GW ++WLESDS YVV L R++ S+ W L W
Sbjct: 83 SLGTNCAFFVELNSASFAVCKAWEVGWLHLWLESDSIYVVHLFRTKGTSVLWELRLAWSR 142
Query: 361 SLFLLSQMHVVVSHIYREGNRVAD 290
L + QM VS+++REGN+ D
Sbjct: 143 YLHFVQQMDFRVSYVFREGNKPTD 166