BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00012401
         (935 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006349021.1| PREDICTED: CRS2-associated factor 2, chlorop...   231   4e-58
ref|XP_004250974.1| PREDICTED: CRS2-associated factor 2, chlorop...   225   2e-56
gb|EXB82569.1| CRS2-associated factor 2 [Morus notabilis]             223   6e-56
ref|XP_006483899.1| PREDICTED: CRS2-associated factor 2, chlorop...   219   1e-54
ref|XP_006438328.1| hypothetical protein CICLE_v10031138mg [Citr...   219   1e-54
ref|XP_006840310.1| hypothetical protein AMTR_s00045p00074390 [A...   218   3e-54
ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chlorop...   217   4e-54
ref|XP_002315689.2| hypothetical protein POPTR_0010s05230g [Popu...   216   1e-53
ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   216   1e-53
emb|CBI28562.3| unnamed protein product [Vitis vinifera]              214   5e-53
ref|XP_002525395.1| conserved hypothetical protein [Ricinus comm...   213   6e-53
gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]         211   3e-52
gb|EOY00533.1| RNA-binding CRS1 / YhbY (CRM) domain-containing p...   208   2e-51
ref|XP_004155360.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   208   3e-51
ref|XP_004135256.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   208   3e-51
ref|XP_004298480.1| PREDICTED: CRS2-associated factor 2, chlorop...   204   4e-50
gb|EMJ28681.1| hypothetical protein PRUPE_ppa003604mg [Prunus pe...   204   4e-50
ref|XP_006416086.1| hypothetical protein EUTSA_v10007246mg [Eutr...   200   6e-49
ref|XP_003530640.1| PREDICTED: CRS2-associated factor 2, chlorop...   199   1e-48
ref|NP_173754.2| CRS2-associated factor 2 [Arabidopsis thaliana]...   198   2e-48

>ref|XP_006349021.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Solanum
            tuberosum]
          Length = 564

 Score =  231 bits (588), Expect = 4e-58
 Identities = 125/236 (52%), Positives = 153/236 (64%), Gaps = 18/236 (7%)
 Frame = -3

Query: 933  PICKLAKNGVYISLVRDVRTAFEGSVLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDD 754
            PICKLAKNGVY++LVRDVR+AFE   LVKIDC+GMHASDYKK+GAKLKELVPCVLLSFDD
Sbjct: 329  PICKLAKNGVYLTLVRDVRSAFEACPLVKIDCRGMHASDYKKLGAKLKELVPCVLLSFDD 388

Query: 753  EQILMWRGREWKSMYENETPT-----------INXXXXXXXXXXXXXXXXXXXXXSPKMM 607
            EQILMWRG++WK MY N  P            IN                     SPKM 
Sbjct: 389  EQILMWRGKDWKPMYGNAPPVVSSRIDAVADEINTSGRSGTAKDYSNAHSRTRSTSPKMK 448

Query: 606  SLWQRAIESGKASVLDEIDLSPDELLSKVEEFDSRSQAIEHSYPAIIYSNRES------- 448
            SLW+ AI+SGKA +LD+IDL PD+LL+KVEEF S SQAIEH+YPA++ SN+ S       
Sbjct: 449  SLWKNAIDSGKALLLDDIDLKPDDLLNKVEEFASISQAIEHTYPALVLSNKRSPEQPGLM 508

Query: 447  LKAQRENXXXXXXXXXXXXXXXXXXXINDSFEAVESSVPVGSLPIDWIAKQLSEND 280
             +   ++                   IN+SFEA+ES+VP G LP+D I K+ S+++
Sbjct: 509  WRGSSDDDNDSDDEISDDDDHEDKYYINNSFEALESTVPEGLLPVDLIVKEFSDDE 564


>ref|XP_004250974.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Solanum
            lycopersicum]
          Length = 563

 Score =  225 bits (573), Expect = 2e-56
 Identities = 124/235 (52%), Positives = 151/235 (64%), Gaps = 17/235 (7%)
 Frame = -3

Query: 933  PICKLAKNGVYISLVRDVRTAFEGSVLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDD 754
            PICKLAKNGVY++LVRDVR+AFE   LVKIDC+GMHASDYKK+GAKLKELVPCVLLSFDD
Sbjct: 329  PICKLAKNGVYLTLVRDVRSAFEACPLVKIDCRGMHASDYKKLGAKLKELVPCVLLSFDD 388

Query: 753  EQILMWRGREWKSMYEN-----------ETPTINXXXXXXXXXXXXXXXXXXXXXSPKMM 607
            EQILMWRG++WK MY N               IN                     SPKMM
Sbjct: 389  EQILMWRGKDWKPMYGNGPSAVSSRIDAVADEINTSGRSGTAKDYSNTHLRTRRTSPKMM 448

Query: 606  SLWQRAIESGKASVLDEIDLSPDELLSKVEEFDSRSQAIEHSYPAIIYSNRE------SL 445
            SLW+ AI+SGKA +LD+IDL PD+LL+KVEEF S SQAIEH+YPA++ S++       S+
Sbjct: 449  SLWKNAIDSGKALLLDDIDLKPDDLLNKVEEFASISQAIEHTYPALVLSSKRVPEQSGSM 508

Query: 444  KAQRENXXXXXXXXXXXXXXXXXXXINDSFEAVESSVPVGSLPIDWIAKQLSEND 280
                 +                   IN SFEA+ES+VP G LP+D I K+ S+++
Sbjct: 509  WRGSSDDDNDSDDEISDGDHEDKYYINTSFEALESTVPKGLLPVDLIVKEFSDDE 563


>gb|EXB82569.1| CRS2-associated factor 2 [Morus notabilis]
          Length = 571

 Score =  223 bits (569), Expect = 6e-56
 Identities = 123/228 (53%), Positives = 146/228 (64%), Gaps = 11/228 (4%)
 Frame = -3

Query: 933  PICKLAKNGVYISLVRDVRTAFEGSVLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDD 754
            PICKLAKNGVYISLV+DVR AFEGS LVKIDCKGMHASDYKK+GAKLKELVPCVLLSFDD
Sbjct: 344  PICKLAKNGVYISLVKDVRHAFEGSPLVKIDCKGMHASDYKKLGAKLKELVPCVLLSFDD 403

Query: 753  EQILMWRGREWKSMYE---------NETPTINXXXXXXXXXXXXXXXXXXXXXSPKMMSL 601
            EQILMWRG +WKSMY          N+  T +                     SPKM+SL
Sbjct: 404  EQILMWRGSDWKSMYRDVSIPSILGNDVVTSDLHRSGKDNDDSGDPDTQTVRTSPKMLSL 463

Query: 600  WQRAIESGKASVLDEIDLSPDELLSKVEEFDSRSQAIEHSYPAIIYSNRESLKAQRE--N 427
            W+RA+ES KA +LDEI+L PD LL KVEEF+  SQA EHSYPA+I S  +   +  E   
Sbjct: 464  WKRALESNKAILLDEINLGPDALLMKVEEFEGISQATEHSYPALIVSGEDGTSSSMEESE 523

Query: 426  XXXXXXXXXXXXXXXXXXXINDSFEAVESSVPVGSLPIDWIAKQLSEN 283
                                +D +   +SS+P+GSLP+D IAK+ S++
Sbjct: 524  YLSQSDDDNDDFIDDYDEENDDVYYDSDSSLPLGSLPVDVIAKKFSQD 571


>ref|XP_006483899.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Citrus
           sinensis]
          Length = 552

 Score =  219 bits (558), Expect = 1e-54
 Identities = 124/226 (54%), Positives = 149/226 (65%), Gaps = 12/226 (5%)
 Frame = -3

Query: 933 PICKLAKNGVYISLVRDVRTAFEGSVLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDD 754
           PICKLAKNGVY++LVRDVR AFEGS LVK++CKGMHASDYKK+GAKLKELVPCVLLSFDD
Sbjct: 325 PICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDD 384

Query: 753 EQILMWRGREWKSMYENETPTIN-------XXXXXXXXXXXXXXXXXXXXXSPKMMSLWQ 595
           EQILMWRG++WKSMY  E P+ +                            SPKM+SLW+
Sbjct: 385 EQILMWRGKDWKSMYP-EPPSFSNPVDLDIAGDADGSGTPSDDPSQGTIRSSPKMISLWK 443

Query: 594 RAIESGKASVLDEIDLSPDELLSKVEEFDSRSQAIEHSYPAIIYSNRE---SLKAQRENX 424
           RAIES KA VLDEI+L PD+LL KVEEF+  SQA EHSYPA++ S  +   S  A+ E+ 
Sbjct: 444 RAIESTKALVLDEINLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYEDG 503

Query: 423 XXXXXXXXXXXXXXXXXXINDSFEAVESS--VPVGSLPIDWIAKQL 292
                              +D F   +SS  VP+GSLP+D IA++L
Sbjct: 504 SQSENYDEDEFYPEDDFNDDDEFYDSDSSDVVPLGSLPVDHIAERL 549


>ref|XP_006438328.1| hypothetical protein CICLE_v10031138mg [Citrus clementina]
           gi|557540524|gb|ESR51568.1| hypothetical protein
           CICLE_v10031138mg [Citrus clementina]
          Length = 552

 Score =  219 bits (558), Expect = 1e-54
 Identities = 124/226 (54%), Positives = 149/226 (65%), Gaps = 12/226 (5%)
 Frame = -3

Query: 933 PICKLAKNGVYISLVRDVRTAFEGSVLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDD 754
           PICKLAKNGVY++LVRDVR AFEGS LVK++CKGMHASDYKK+GAKLKELVPCVLLSFDD
Sbjct: 325 PICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDD 384

Query: 753 EQILMWRGREWKSMYENETPTIN-------XXXXXXXXXXXXXXXXXXXXXSPKMMSLWQ 595
           EQILMWRG++WKSMY  E P+ +                            SPKM+SLW+
Sbjct: 385 EQILMWRGKDWKSMYP-EPPSFSNPVDLDIAGDADGSGTPSDDPSQGTIRSSPKMISLWK 443

Query: 594 RAIESGKASVLDEIDLSPDELLSKVEEFDSRSQAIEHSYPAIIYSNRE---SLKAQRENX 424
           RAIES KA VLDEI+L PD+LL KVEEF+  SQA EHSYPA++ S  +   S  A+ E+ 
Sbjct: 444 RAIESTKALVLDEINLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYEDG 503

Query: 423 XXXXXXXXXXXXXXXXXXINDSFEAVESS--VPVGSLPIDWIAKQL 292
                              +D F   +SS  VP+GSLP+D IA++L
Sbjct: 504 SQSENYDEDEFYPEDDFNDDDEFYDSDSSDVVPLGSLPVDHIAERL 549


>ref|XP_006840310.1| hypothetical protein AMTR_s00045p00074390 [Amborella trichopoda]
            gi|548842028|gb|ERN01985.1| hypothetical protein
            AMTR_s00045p00074390 [Amborella trichopoda]
          Length = 570

 Score =  218 bits (555), Expect = 3e-54
 Identities = 116/241 (48%), Positives = 148/241 (61%), Gaps = 24/241 (9%)
 Frame = -3

Query: 933  PICKLAKNGVYISLVRDVRTAFEGSVLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDD 754
            PICKLAKNGVYI+LV+DVR AFE S +VKI+C+GMHASDYKK+GAKLKELVPC+LLSFDD
Sbjct: 330  PICKLAKNGVYITLVKDVRDAFEASSIVKINCQGMHASDYKKLGAKLKELVPCILLSFDD 389

Query: 753  EQILMWRGREWKSMYENETPTIN------------------------XXXXXXXXXXXXX 646
            EQILMWRG++WKSMY++  PT++                                     
Sbjct: 390  EQILMWRGQDWKSMYQDTPPTVSGDNSTYYSNLNNTSLLSSDDTTGAENLVSDQMVGLDV 449

Query: 645  XXXXXXXXSPKMMSLWQRAIESGKASVLDEIDLSPDELLSKVEEFDSRSQAIEHSYPAII 466
                    S +MMSLW+ AIES KA  L+EI+L PD LL KVEEF + SQA+EHSYPA++
Sbjct: 450  GASSPKIKSKRMMSLWKSAIESRKALFLEEINLDPDALLKKVEEFQNVSQAMEHSYPAVV 509

Query: 465  YSNRESLKAQRENXXXXXXXXXXXXXXXXXXXINDSFEAVESSVPVGSLPIDWIAKQLSE 286
                E+ K   E+                     + FE ++ SVP+GSLP+D++A+QLS 
Sbjct: 510  LPEAEAGKISEEDSSGKSWEFEDDDDDNDDDDSGEDFEVIDESVPLGSLPVDFLAEQLSS 569

Query: 285  N 283
            +
Sbjct: 570  D 570


>ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Vitis vinifera]
            gi|297739063|emb|CBI28552.3| unnamed protein product
            [Vitis vinifera]
          Length = 561

 Score =  217 bits (553), Expect = 4e-54
 Identities = 124/230 (53%), Positives = 142/230 (61%), Gaps = 14/230 (6%)
 Frame = -3

Query: 933  PICKLAKNGVYISLVRDVRTAFEGSVLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDD 754
            PIC+L KNGVYISLV+DVR AFEGS LVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDD
Sbjct: 331  PICRLVKNGVYISLVKDVRDAFEGSPLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDD 390

Query: 753  EQILMWRGREWKSMYENETPTI---------NXXXXXXXXXXXXXXXXXXXXXSPKMMSL 601
            EQIL WRG  WKSMY+     +                               SPKMMSL
Sbjct: 391  EQILTWRGHGWKSMYQGAPSFLIPVVADVASGLEGSGIPKSNHHRLDTKAVSASPKMMSL 450

Query: 600  WQRAIESGKASVLDEIDLSPDELLSKVEEFDSRSQAIEHSYPAIIYSNRE---SLKAQRE 430
            W+ AIES KA +LDE  L PD LL  VEEF+  SQA EHSYPA++ S+ +     KA+ E
Sbjct: 451  WKSAIESSKALLLDETGLGPDALLKVVEEFEGISQATEHSYPALVMSSEDGTGGTKAEYE 510

Query: 429  --NXXXXXXXXXXXXXXXXXXXINDSFEAVESSVPVGSLPIDWIAKQLSE 286
              N                   +N+S E +ES VP+GSLP+D +AKQL E
Sbjct: 511  GYNSEDYSEDEMYNDDDDDEYLVNESLEEMESPVPLGSLPVDLLAKQLGE 560


>ref|XP_002315689.2| hypothetical protein POPTR_0010s05230g [Populus trichocarpa]
            gi|550329113|gb|EEF01860.2| hypothetical protein
            POPTR_0010s05230g [Populus trichocarpa]
          Length = 557

 Score =  216 bits (550), Expect = 1e-53
 Identities = 119/229 (51%), Positives = 145/229 (63%), Gaps = 13/229 (5%)
 Frame = -3

Query: 933  PICKLAKNGVYISLVRDVRTAFEGSVLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDD 754
            PICKLAKNGVYI+LVRDVR AFEGS LVK+DCKGM  SDYKK+GAKLK+LVPCVLLSFDD
Sbjct: 328  PICKLAKNGVYITLVRDVRAAFEGSPLVKVDCKGMEPSDYKKLGAKLKDLVPCVLLSFDD 387

Query: 753  EQILMWRGREWKSMYENETPTIN----------XXXXXXXXXXXXXXXXXXXXXSPKMMS 604
            EQILMWRG++WKSMY    P+I+                               SPKMM 
Sbjct: 388  EQILMWRGQDWKSMYPEARPSISFPAELDIASGSDDSGKSDDDCDNSDAKILSSSPKMML 447

Query: 603  LWQRAIESGKASVLDEIDLSPDELLSKVEEFDSRSQAIEHSYPAIIYSNRESLK---AQR 433
            LW+ A+ES KA +LDEIDL PD LL+KVEEF+  SQA EHSYPA++ S+ +      +  
Sbjct: 448  LWKHALESNKAILLDEIDLGPDALLTKVEEFEGISQATEHSYPALVMSSEDGSSNSISTF 507

Query: 432  ENXXXXXXXXXXXXXXXXXXXINDSFEAVESSVPVGSLPIDWIAKQLSE 286
            E+                    ++SFE +E+S P GSL ID IA++L +
Sbjct: 508  EDDSHSENFSEDDMYSDDEYYDSESFEELETSAPPGSLSIDLIAEKLDK 556


>ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
            chloroplastic-like [Vitis vinifera]
          Length = 560

 Score =  216 bits (549), Expect = 1e-53
 Identities = 123/229 (53%), Positives = 141/229 (61%), Gaps = 13/229 (5%)
 Frame = -3

Query: 933  PICKLAKNGVYISLVRDVRTAFEGSVLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDD 754
            PIC+L KNGVYISLV+DVR AFEGS LVKIDCKGMHASDYKKIGAKLKE VPCVLLSFDD
Sbjct: 331  PICRLVKNGVYISLVKDVRDAFEGSPLVKIDCKGMHASDYKKIGAKLKESVPCVLLSFDD 390

Query: 753  EQILMWRGREWKSMYENETPTI---------NXXXXXXXXXXXXXXXXXXXXXSPKMMSL 601
            EQIL WRG  WKSMY+     +                               SPKMMSL
Sbjct: 391  EQILTWRGHGWKSMYQGAPSFLIPVVADVASGLEGSGVPKSNHHRLDTKAVSASPKMMSL 450

Query: 600  WQRAIESGKASVLDEIDLSPDELLSKVEEFDSRSQAIEHSYPAIIYSNRE---SLKAQRE 430
            W+ AIES KA +LDEI L PD LL  VEEF+  SQA EHSYPA++ S+ +     KA+ E
Sbjct: 451  WKSAIESSKALLLDEIGLGPDALLKVVEEFEGISQATEHSYPALVMSSEDGTGGTKAEHE 510

Query: 429  N-XXXXXXXXXXXXXXXXXXXINDSFEAVESSVPVGSLPIDWIAKQLSE 286
                                 +N+S E +ES VP+GSLP+D +AKQL E
Sbjct: 511  GYNSEDYSEDEMYNDDDDEYLVNESLEEMESPVPLGSLPVDLLAKQLGE 559


>emb|CBI28562.3| unnamed protein product [Vitis vinifera]
          Length = 422

 Score =  214 bits (544), Expect = 5e-53
 Identities = 122/227 (53%), Positives = 140/227 (61%), Gaps = 13/227 (5%)
 Frame = -3

Query: 933 PICKLAKNGVYISLVRDVRTAFEGSVLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDD 754
           PIC+L KNGVYISLV+DVR AFEGS LVKIDCKGMHASDYKKIGAKLKE VPCVLLSFDD
Sbjct: 162 PICRLVKNGVYISLVKDVRDAFEGSPLVKIDCKGMHASDYKKIGAKLKESVPCVLLSFDD 221

Query: 753 EQILMWRGREWKSMYENETPTI---------NXXXXXXXXXXXXXXXXXXXXXSPKMMSL 601
           EQIL WRG  WKSMY+     +                               SPKMMSL
Sbjct: 222 EQILTWRGHGWKSMYQGAPSFLIPVVADVASGLEGSGVPKSNHHRLDTKAVSASPKMMSL 281

Query: 600 WQRAIESGKASVLDEIDLSPDELLSKVEEFDSRSQAIEHSYPAIIYSNRE---SLKAQRE 430
           W+ AIES KA +LDEI L PD LL  VEEF+  SQA EHSYPA++ S+ +     KA+ E
Sbjct: 282 WKSAIESSKALLLDEIGLGPDALLKVVEEFEGISQATEHSYPALVMSSEDGTGGTKAEHE 341

Query: 429 N-XXXXXXXXXXXXXXXXXXXINDSFEAVESSVPVGSLPIDWIAKQL 292
                                +N+S E +ES VP+GSLP+D +AKQL
Sbjct: 342 GYNSEDYSEDEMYNDDDDEYLVNESLEEMESPVPLGSLPVDLLAKQL 388


>ref|XP_002525395.1| conserved hypothetical protein [Ricinus communis]
            gi|223535358|gb|EEF37033.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 561

 Score =  213 bits (543), Expect = 6e-53
 Identities = 121/234 (51%), Positives = 145/234 (61%), Gaps = 18/234 (7%)
 Frame = -3

Query: 933  PICKLAKNGVYISLVRDVRTAFEGSVLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDD 754
            PICKLAKNGVYI+LVRDVR AFEGS LVKIDCKGM+ SDYKK+GAKLKELVPCVLLSFDD
Sbjct: 327  PICKLAKNGVYITLVRDVRNAFEGSPLVKIDCKGMNPSDYKKLGAKLKELVPCVLLSFDD 386

Query: 753  EQILMWRGREWKSMYEN----ETP-----TINXXXXXXXXXXXXXXXXXXXXXSPKMMSL 601
            E ILMWRG+ WK MY       TP     T                       SPKMMSL
Sbjct: 387  EHILMWRGQNWKPMYPEVPSVSTPDAADFTSGSDDSGKFEDDPSNRDANVVRSSPKMMSL 446

Query: 600  WQRAIESGKASVLDEIDLSPDELLSKVEEFDSRSQAIEHSYPAIIYSNRESLK------- 442
            W+ AIES KA +LD+IDL PD+LL KVEEF+  SQA EHSYPA+I S+ +          
Sbjct: 447  WECAIESSKAILLDQIDLGPDDLLRKVEEFECISQATEHSYPAVILSSEDGANNTVAAFG 506

Query: 441  --AQRENXXXXXXXXXXXXXXXXXXXINDSFEAVESSVPVGSLPIDWIAKQLSE 286
              +   +                    +DSFE V+++VP+GSLP+D +A++L +
Sbjct: 507  DDSLSGSFTEEDDTYTDDEYEDDEYYDSDSFEEVDTAVPLGSLPVDRLAERLHQ 560


>gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]
          Length = 603

 Score =  211 bits (537), Expect = 3e-52
 Identities = 117/226 (51%), Positives = 143/226 (63%), Gaps = 11/226 (4%)
 Frame = -3

Query: 933  PICKLAKNGVYISLVRDVRTAFEGSVLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDD 754
            PICKLAKNGVYISLV DVR AFEGS+LVKIDC GMH SDYKK+GAKLKELVPCVLLSFD+
Sbjct: 377  PICKLAKNGVYISLVDDVRHAFEGSILVKIDCTGMHESDYKKLGAKLKELVPCVLLSFDN 436

Query: 753  EQILMWRGREWKSMYENE-----------TPTINXXXXXXXXXXXXXXXXXXXXXSPKMM 607
            EQILMWRG++WKS+  ++             ++                      SPKM 
Sbjct: 437  EQILMWRGKDWKSVISDDRSAPLPSRASSNDSLGSSGESVENSDLLNGNHHTIKTSPKMK 496

Query: 606  SLWQRAIESGKASVLDEIDLSPDELLSKVEEFDSRSQAIEHSYPAIIYSNRESLKAQREN 427
             LW+RAI+S KA +LDEI L+PDELL +VEEF+  SQA EHSYPA I S+ E + +  ++
Sbjct: 497  LLWERAIDSNKALMLDEIGLAPDELLERVEEFERISQATEHSYPAFITSS-EEVSSPADS 555

Query: 426  XXXXXXXXXXXXXXXXXXXINDSFEAVESSVPVGSLPIDWIAKQLS 289
                                 D F+ V+  VP+GSLP+D IAK+LS
Sbjct: 556  PESQDHSEANYNSDDDVGREEDLFDNVDPLVPLGSLPVDIIAKKLS 601


>gb|EOY00533.1| RNA-binding CRS1 / YhbY (CRM) domain-containing protein [Theobroma
            cacao]
          Length = 562

 Score =  208 bits (530), Expect = 2e-51
 Identities = 121/229 (52%), Positives = 140/229 (61%), Gaps = 15/229 (6%)
 Frame = -3

Query: 933  PICKLAKNGVYISLVRDVRTAFEGSVLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDD 754
            PICKLAKNGVY SLV+DVR AFEGS LVKIDCKGMHASDYKKIGAKLKEL PCVLLSFDD
Sbjct: 329  PICKLAKNGVYASLVKDVRDAFEGSPLVKIDCKGMHASDYKKIGAKLKELAPCVLLSFDD 388

Query: 753  EQILMWRGREWKSMYENETPTI---------NXXXXXXXXXXXXXXXXXXXXXSPKMMSL 601
            EQILMWRG++WKSMY     T+                               SPKMM+L
Sbjct: 389  EQILMWRGQDWKSMYPEAPSTLLPSKSGISSGLDDSAKSADDCHTPDIKNGISSPKMMTL 448

Query: 600  WQRAIESGKASVLDEIDLSPDELLSKVEEFDSRSQAIEHSYPAIIYSNRE---SLKAQRE 430
            W  AIES KA +LDEI L PD LL KVEEF+  S   EHS  A++ S+ +   S  A+ E
Sbjct: 449  WNNAIESNKALLLDEIALGPDALLEKVEEFEGISLVTEHSCEALVLSSEDGSGSSMAESE 508

Query: 429  NXXXXXXXXXXXXXXXXXXXINDSF---EAVESSVPVGSLPIDWIAKQL 292
                                IND +   E V+SS+P+GSLP+D IA++L
Sbjct: 509  AGSYSEDFGGENEIYSDDDIINDEYYDVEEVDSSIPLGSLPVDKIAERL 557


>ref|XP_004155360.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
            chloroplastic-like [Cucumis sativus]
          Length = 603

 Score =  208 bits (529), Expect = 3e-51
 Identities = 115/226 (50%), Positives = 141/226 (62%), Gaps = 11/226 (4%)
 Frame = -3

Query: 933  PICKLAKNGVYISLVRDVRTAFEGSVLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDD 754
            PICKLAKNGVYISLV DVR AFEGS+LVKIDC GMH SDYKK+GAKLKELVPCVLLSFD+
Sbjct: 377  PICKLAKNGVYISLVNDVRHAFEGSILVKIDCTGMHESDYKKLGAKLKELVPCVLLSFDN 436

Query: 753  EQILMWRGREWKSMYENE-----------TPTINXXXXXXXXXXXXXXXXXXXXXSPKMM 607
            EQILMWRG++WKS+  ++             ++                      SPKM 
Sbjct: 437  EQILMWRGKDWKSIISDDCSAPLPSRASSNDSLGSPGESLENSDLLHDNHHTIKTSPKMK 496

Query: 606  SLWQRAIESGKASVLDEIDLSPDELLSKVEEFDSRSQAIEHSYPAIIYSNRESLKAQREN 427
             LW+ AI+S KA +LDEI L+PD+LL KVEEF+  SQA EHSYPA I S+ E + +  ++
Sbjct: 497  LLWEHAIDSNKALLLDEIGLAPDDLLEKVEEFERISQATEHSYPAFITSS-EDVSSPDDS 555

Query: 426  XXXXXXXXXXXXXXXXXXXINDSFEAVESSVPVGSLPIDWIAKQLS 289
                                 D F+  +  VP+GSLP+D IAK+LS
Sbjct: 556  PKSQDHTEANYNSDDDVGREEDLFDNADPLVPLGSLPVDIIAKKLS 601


>ref|XP_004135256.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
            chloroplastic-like [Cucumis sativus]
          Length = 602

 Score =  208 bits (529), Expect = 3e-51
 Identities = 115/226 (50%), Positives = 141/226 (62%), Gaps = 11/226 (4%)
 Frame = -3

Query: 933  PICKLAKNGVYISLVRDVRTAFEGSVLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDD 754
            PICKLAKNGVYISLV DVR AFEGS+LVKIDC GMH SDYKK+GAKLKELVPCVLLSFD+
Sbjct: 376  PICKLAKNGVYISLVNDVRHAFEGSILVKIDCTGMHESDYKKLGAKLKELVPCVLLSFDN 435

Query: 753  EQILMWRGREWKSMYENE-----------TPTINXXXXXXXXXXXXXXXXXXXXXSPKMM 607
            EQILMWRG++WKS+  ++             ++                      SPKM 
Sbjct: 436  EQILMWRGKDWKSIISDDRSAPLPSRASSNDSLGSPGESLENSDLLHGNHHTIKTSPKMK 495

Query: 606  SLWQRAIESGKASVLDEIDLSPDELLSKVEEFDSRSQAIEHSYPAIIYSNRESLKAQREN 427
             LW+ AI+S KA +LDEI L+PD+LL KVEEF+  SQA EHSYPA I S+ E + +  ++
Sbjct: 496  LLWEHAIDSNKALLLDEIGLAPDDLLEKVEEFERISQATEHSYPAFITSS-EDVSSPDDS 554

Query: 426  XXXXXXXXXXXXXXXXXXXINDSFEAVESSVPVGSLPIDWIAKQLS 289
                                 D F+  +  VP+GSLP+D IAK+LS
Sbjct: 555  PKSQDHTEANYNSDDDVGREEDLFDNADPLVPLGSLPVDIIAKKLS 600


>ref|XP_004298480.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Fragaria
            vesca subsp. vesca]
          Length = 572

 Score =  204 bits (519), Expect = 4e-50
 Identities = 119/239 (49%), Positives = 139/239 (58%), Gaps = 22/239 (9%)
 Frame = -3

Query: 933  PICKLAKNGVYISLVRDVRTAFEGSVLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDD 754
            PICKLAKNGVYI+LVRDVR AFEGS LVKIDCKGMHASDYKK+GAKLKELVPCVLLSFDD
Sbjct: 334  PICKLAKNGVYITLVRDVRHAFEGSSLVKIDCKGMHASDYKKLGAKLKELVPCVLLSFDD 393

Query: 753  EQILMWRGREWKSMYENETPT-----------INXXXXXXXXXXXXXXXXXXXXXSPKMM 607
            EQILMWRG +W S+     P+           I                      SPKMM
Sbjct: 394  EQILMWRGPDWVSISGTRLPSAYSDVYSDVDIITSKGRVKDDDASSKPDTKTVISSPKMM 453

Query: 606  SLWQRAIESGKASVLDEIDLSPDELLSKVEEFDSRSQAIEHSYPAIIYSNRESLKAQREN 427
            SLW+R+IE+ KA +L+E+DL PD LL KVEEF+  SQ  EHSYPA+I S+ +      + 
Sbjct: 454  SLWRRSIETKKALLLEELDLDPDALLEKVEEFEGISQVTEHSYPALILSSEDGTSNAIQV 513

Query: 426  XXXXXXXXXXXXXXXXXXXINDSFEAVE-----------SSVPVGSLPIDWIAKQLSEN 283
                                ND     E            SVP+GSLPID IA++L  +
Sbjct: 514  YEDAPPNGPYSEYEEAYSDDNDDDYVYEDDSDDDALYDSDSVPLGSLPIDVIAEKLDHD 572


>gb|EMJ28681.1| hypothetical protein PRUPE_ppa003604mg [Prunus persica]
          Length = 562

 Score =  204 bits (519), Expect = 4e-50
 Identities = 115/230 (50%), Positives = 141/230 (61%), Gaps = 13/230 (5%)
 Frame = -3

Query: 933  PICKLAKNGVYISLVRDVRTAFEGSVLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDD 754
            PICKLAKNGVYI+LVRDVR AFEGS LVKIDC+GMHASDYKK+GAKLKELVPCVLLSFDD
Sbjct: 333  PICKLAKNGVYITLVRDVRHAFEGSPLVKIDCRGMHASDYKKLGAKLKELVPCVLLSFDD 392

Query: 753  EQILMWRGREWKSMYE--------NETPTINXXXXXXXXXXXXXXXXXXXXXSPKMMSLW 598
            E ILMWRG  W SM++         +   ++                     SPKMMSLW
Sbjct: 393  EHILMWRGPNWISMHQAAPSPSDTADFDILSSTGRGKDYDKPCKPDTKTVMTSPKMMSLW 452

Query: 597  QRAIESGKASVLDEIDLSPDELLSKVEEFDSRSQAIEHSYPAIIYSNRESLKAQ---REN 427
            +R+I+S KA +LDE+DL PD LL KVEEF+  SQA EHSYPA+I S+ +   +     E 
Sbjct: 453  KRSIDSNKALLLDELDLDPDALLKKVEEFEGVSQATEHSYPALIVSSEDGTSSSVQVFEE 512

Query: 426  XXXXXXXXXXXXXXXXXXXINDSFEAV--ESSVPVGSLPIDWIAKQLSEN 283
                                +D  +A     S+P+GSLP+D I ++L  +
Sbjct: 513  VPQSDPYSEYDDYSDNYDYESDDDDAFYDSDSIPLGSLPVDVIVEELDHD 562


>ref|XP_006416086.1| hypothetical protein EUTSA_v10007246mg [Eutrema salsugineum]
            gi|557093857|gb|ESQ34439.1| hypothetical protein
            EUTSA_v10007246mg [Eutrema salsugineum]
          Length = 563

 Score =  200 bits (509), Expect = 6e-49
 Identities = 111/225 (49%), Positives = 142/225 (63%), Gaps = 9/225 (4%)
 Frame = -3

Query: 933  PICKLAKNGVYISLVRDVRTAFEGSVLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDD 754
            PICKL+KNGVY+SLV+DVR AFE S LVK+DC G+  SDYKKIGAKLKELVPCVLLSFDD
Sbjct: 337  PICKLSKNGVYVSLVKDVRDAFELSPLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDD 396

Query: 753  EQILMWRGREWKSMYENE--TPTIN-------XXXXXXXXXXXXXXXXXXXXXSPKMMSL 601
            EQILMWRGR+WKS + +   TP ++                            SPKM+SL
Sbjct: 397  EQILMWRGRDWKSRFLDNPLTPLLSETNIEDELDPSDKTGEEQTASDPNTVISSPKMISL 456

Query: 600  WQRAIESGKASVLDEIDLSPDELLSKVEEFDSRSQAIEHSYPAIIYSNRESLKAQRENXX 421
            W+RA+ES KA VL+E+DLSPD LL KVEEF+  SQA EH+Y A++  + +  +   ++  
Sbjct: 457  WKRALESSKAIVLEELDLSPDNLLEKVEEFEGTSQAAEHTYTALVLPSNDGAEDYVDDEE 516

Query: 420  XXXXXXXXXXXXXXXXXINDSFEAVESSVPVGSLPIDWIAKQLSE 286
                              +D  E++E + PVGSLP+D I ++L E
Sbjct: 517  RPPVVYSDIDDDFDDECSDDD-ESLEPAGPVGSLPVDKIVRKLRE 560


>ref|XP_003530640.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Glycine max]
          Length = 593

 Score =  199 bits (506), Expect = 1e-48
 Identities = 117/258 (45%), Positives = 140/258 (54%), Gaps = 42/258 (16%)
 Frame = -3

Query: 933  PICKLAKNGVYISLVRDVRTAFEGSVLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDD 754
            PICKLAKNGVY SLV+DVR AFEGS+LVKI+CKG+  SDYKKIGAKLK+LVPCVLLSFDD
Sbjct: 332  PICKLAKNGVYTSLVKDVRDAFEGSILVKINCKGLDPSDYKKIGAKLKDLVPCVLLSFDD 391

Query: 753  EQILMWRGREWKSMYENETPTI---------NXXXXXXXXXXXXXXXXXXXXXSPKMMSL 601
            EQILMWRG++WKS Y    P           N                     SPKM+SL
Sbjct: 392  EQILMWRGKDWKSRYPQPLPVFTPSKANIVGNLENSGETDDNQYKHDGNMVNTSPKMLSL 451

Query: 600  WQRAIESGKASVLDEIDLSPDELLSKVEEFDSRSQAIEHSYPAIIYSNRE---------- 451
            W+RAI+S KA +LDE +L PD LL KVEEFD+ SQA+EHS+PA   S++E          
Sbjct: 452  WKRAIQSSKALLLDEFNLGPDALLEKVEEFDTVSQALEHSHPAFSLSSKENDAEGSSANF 511

Query: 450  -----------------------SLKAQRENXXXXXXXXXXXXXXXXXXXINDSFEAVES 340
                                   S   Q E                     +D   AV++
Sbjct: 512  ENSYSSDGLHTEEDYAKFEDSYSSDALQTEEEEEEEEDEDEDEDEDYYDDEDDDLYAVDT 571

Query: 339  SVPVGSLPIDWIAKQLSE 286
            S   GSLP+D I K+L +
Sbjct: 572  SAQPGSLPVDMIVKKLKQ 589


>ref|NP_173754.2| CRS2-associated factor 2 [Arabidopsis thaliana]
            gi|75173812|sp|Q9LDA9.1|CAF2P_ARATH RecName:
            Full=CRS2-associated factor 2, chloroplastic; AltName:
            Full=Chloroplastic group IIA intron splicing facilitator
            CRS2-associated factor 2; Flags: Precursor
            gi|8778588|gb|AAF79596.1|AC007945_16 F28C11.4
            [Arabidopsis thaliana]
            gi|9295699|gb|AAF87005.1|AC005292_14 F26F24.27
            [Arabidopsis thaliana] gi|17065312|gb|AAL32810.1| Unknown
            protein [Arabidopsis thaliana] gi|21387129|gb|AAM47968.1|
            unknown protein [Arabidopsis thaliana]
            gi|332192262|gb|AEE30383.1| CRS2-associated factor 2
            [Arabidopsis thaliana]
          Length = 564

 Score =  198 bits (504), Expect = 2e-48
 Identities = 112/225 (49%), Positives = 138/225 (61%), Gaps = 9/225 (4%)
 Frame = -3

Query: 933  PICKLAKNGVYISLVRDVRTAFEGSVLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDD 754
            PICKL+KNGVY+SLV+DVR AFE S LVK+DC G+  SDYKKIGAKLKELVPCVLLSFDD
Sbjct: 338  PICKLSKNGVYVSLVKDVRDAFELSSLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDD 397

Query: 753  EQILMWRGREWKSMYE--------NETPTIN-XXXXXXXXXXXXXXXXXXXXXSPKMMSL 601
            EQILMWRGREWKS +         +ET T N                      SPKM+SL
Sbjct: 398  EQILMWRGREWKSRFVDNPLIPSLSETNTTNELDPSDKPSEEQTVANPSTTISSPKMISL 457

Query: 600  WQRAIESGKASVLDEIDLSPDELLSKVEEFDSRSQAIEHSYPAIIYSNRESLKAQRENXX 421
            WQRA+ES KA +L+E+DL PD+LL KVEE +  S A EH+Y A++ SN +       +  
Sbjct: 458  WQRALESSKAVILEELDLGPDDLLKKVEELEGTSLAAEHTYTAMVLSNTDGAAEDYVDEK 517

Query: 420  XXXXXXXXXXXXXXXXXINDSFEAVESSVPVGSLPIDWIAKQLSE 286
                              +D  E+++   PVGSLP+D I ++L E
Sbjct: 518  DRSEEYYSDIDDDFDDECSDD-ESLDPVGPVGSLPVDKIVRKLRE 561