BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00012178
         (677 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    65   1e-08
gb|ABK28206.1| unknown [Arabidopsis thaliana]                          61   4e-07
ref|NP_180979.1| polynucleotidyl transferase, ribonuclease H-lik...    61   4e-07
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    60   8e-07
gb|AAD24601.1| putative non-LTR retroelement reverse transcripta...    58   3e-06

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 55/226 (24%), Positives = 101/226 (44%), Gaps = 1/226 (0%)
 Frame = +2

Query: 2    EDQETLEHILFQCNRAQLVWKLAPVQWSDTLHPSFSVRRWWQQVSEIKDCSITQDRIQLS 181
            E +ET EH+++ C+ +   W ++P++       + S R W   V  + D     +   L 
Sbjct: 1097 EKEETTEHLIWGCDESSRAWYISPLRIHTGNIEAGSFRIW---VESLLDTHKDTEWWALF 1153

Query: 182  VYLLWWLWKTRNIWLFQNIKWSETEIVHRAYQEWMEF-KDLSGTKLKVALSLNSSQESVI 358
              + W +W  RN W+F+  K +  E+V RA +  MEF ++ + T     L+ + +  SV 
Sbjct: 1154 WMICWNIWLGRNKWVFEKKKLAFQEVVERAVRGVMEFEEECAHTSPVETLNTHENGWSV- 1212

Query: 359  GINNLANTVGHFELVISAALVKNGKTGWGGWLCDWNFKLIRAWTTSRDLFIQPVETTLLG 538
                    VG  +L + AA+ K+   G GG + D    ++ A          P       
Sbjct: 1213 ------PPVGMVKLNVDAAVFKHVGIGMGGVVRDAEGDVLLATCCGGWAMEDPAMAEACS 1266

Query: 539  VRHALCVAAKSKAKSLSIQIDDKDIVCTLNNKKKFDGVEAKIAEDI 676
            +R+ L VA ++  ++L +++D K +   L  K        ++ +DI
Sbjct: 1267 LRYGLKVAYEAGFRNLVVEMDCKKLFLQLRGKASDVTPFGRVVDDI 1312


>gb|ABK28206.1| unknown [Arabidopsis thaliana]
          Length = 293

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 33/111 (29%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
 Frame = +2

Query: 2   EDQETLEHILFQCNRAQLVWKLAPV------QWSDTLHPSFSVRRWWQQVSEIKDCSITQ 163
           + +ET+ H+LF+C  A+LVW ++P+      +W+D+L+ +     +W    E++   + +
Sbjct: 17  DSRETVNHLLFKCCFARLVWAISPIPAYPEGEWTDSLYANL----YWVLNLEVEIPKLGK 72

Query: 164 DRIQLSVYLLWWLWKTRNIWLFQNIKWSETEIVHRA---YQEWMEFKDLSG 307
               L  +LLW LWK+RN  +F+  ++   E++ RA   ++EW   ++L G
Sbjct: 73  IG-NLVPWLLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRRELEG 122


>ref|NP_180979.1| polynucleotidyl transferase, ribonuclease H-like superfamily
           protein [Arabidopsis thaliana] gi|3337363|gb|AAC27408.1|
           putative non-LTR retroelement reverse transcriptase
           [Arabidopsis thaliana] gi|91805481|gb|ABE65469.1|
           hypothetical protein At2g34320 [Arabidopsis thaliana]
           gi|330253864|gb|AEC08958.1| polynucleotidyl transferase,
           ribonuclease H-like superfamily protein [Arabidopsis
           thaliana]
          Length = 292

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 33/111 (29%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
 Frame = +2

Query: 2   EDQETLEHILFQCNRAQLVWKLAPV------QWSDTLHPSFSVRRWWQQVSEIKDCSITQ 163
           + +ET+ H+LF+C  A+LVW ++P+      +W+D+L+ +     +W    E++   + +
Sbjct: 17  DSRETVNHLLFKCCFARLVWAISPIPAYPEGEWTDSLYANL----YWVLNLEVEIPKLGK 72

Query: 164 DRIQLSVYLLWWLWKTRNIWLFQNIKWSETEIVHRA---YQEWMEFKDLSG 307
               L  +LLW LWK+RN  +F+  ++   E++ RA   ++EW   ++L G
Sbjct: 73  IG-NLVPWLLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRRELEG 122


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1225

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 51/222 (22%), Positives = 105/222 (47%), Gaps = 1/222 (0%)
 Frame = +2

Query: 5    DQETLEHILFQCNRAQLVWKLAPVQWSDTLHPSFSVRRWWQ-QVSEIKDCSITQDRIQLS 181
            ++E++ H+LF C  ++ +W L+P+  S+ + P  S+   +   +S  K+  I +D +++ 
Sbjct: 970  EEESINHLLFLCPPSRQIWALSPIPSSEYIFPRNSLFYNFDFLLSRGKEFDIAEDIMEIF 1029

Query: 182  VYLLWWLWKTRNIWLFQNIKWSETEIVHRAYQEWMEFKDLSGTKLKVALSLNSSQESVIG 361
             ++LW++WK+RN ++F+N+  S   I+  A QE   +K  +    +VA      Q     
Sbjct: 1030 PWILWYIWKSRNRFIFENVIESPQVILDFAIQEANVWKQANSK--EVATEYPPPQVVPAN 1087

Query: 362  INNLANTVGHFELVISAALVKNGKTGWGGWLCDWNFKLIRAWTTSRDLFIQPVETTLLGV 541
            +    N V  F+   ++  +K+  +G G  L D +  L+    ++R   + P+   +  +
Sbjct: 1088 LPPTRN-VCQFD---ASWHLKDTLSGHGWVLVDQDIVLLLGLKSARK-SLSPLHAEVDSL 1142

Query: 542  RHALCVAAKSKAKSLSIQIDDKDIVCTLNNKKKFDGVEAKIA 667
              A+           S   D  D +  L N  ++    A++A
Sbjct: 1143 LWAMECMISLGVSDCSFASDSADFISLLENPSEWPTFVAELA 1184


>gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1319

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
 Frame = +2

Query: 2    EDQETLEHILFQCNRAQLVWKLAPVQWSDTLHPSFSVRRWWQQVSEIKDCSITQDRIQLS 181
            E+ ET+ H+LFQC  A+ VW L+ +Q   T   +         +   ++  I +    +S
Sbjct: 1041 EEIETINHLLFQCPFARQVWALSLIQAPATGFGTSIFSNINHVIQNSQNFGIPRHMRTVS 1100

Query: 182  VYLLWWLWKTRNIWLFQNIKWSETEIVHRAYQE---WMEFKDLS 304
             +LLW +WK RN  LFQ    + +EIV +AY+E   W+  ++ S
Sbjct: 1101 PWLLWEIWKNRNKTLFQGTGLTSSEIVAKAYEECNLWINAQEKS 1144