BLASTX nr result
ID: Rehmannia26_contig00009428
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00009428
(1627 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I an... 620 e-175
ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I an... 616 e-174
gb|EOY11969.1| RNA polymerase I subunit 43 isoform 1 [Theobroma ... 614 e-173
ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I an... 614 e-173
ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citr... 585 e-164
ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I an... 583 e-164
ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, ... 579 e-162
gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlise... 560 e-157
ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I an... 550 e-154
ref|XP_002300385.1| DNA-directed RNA polymerase family protein [... 543 e-152
ref|NP_176261.1| RNA polymerase I subunit 43 [Arabidopsis thalia... 538 e-150
gb|EOY11972.1| RNA polymerase I subunit 43 isoform 4 [Theobroma ... 537 e-150
ref|XP_004488284.1| PREDICTED: DNA-directed RNA polymerases I an... 537 e-150
ref|XP_004498147.1| PREDICTED: DNA-directed RNA polymerases I an... 536 e-150
ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata] ... 534 e-149
gb|EXB51013.1| DNA-directed RNA polymerases I and III subunit RP... 534 e-149
ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I an... 531 e-148
ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycin... 531 e-148
gb|EMJ06508.1| hypothetical protein PRUPE_ppa006811mg [Prunus pe... 529 e-147
ref|XP_006414263.1| hypothetical protein EUTSA_v10025407mg [Eutr... 522 e-145
>ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Solanum tuberosum]
Length = 393
Score = 620 bits (1598), Expect = e-175
Identities = 302/395 (76%), Positives = 348/395 (88%)
Frame = -2
Query: 1542 GSQNQTVGMVSEKEKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTH 1363
G+ ++ M SE S + +E+ TKV VWDLPD+PKGKLPPH++LQRTRVLC APT+
Sbjct: 2 GTATESESMDSE---STSTQEETFTKVSVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTN 58
Query: 1362 TESIQYSGAYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILI 1183
TE++ YSGAYAAMGVDNS+R E+FRNNF+VE+++L ED++EFDMIGID +LANAFRRILI
Sbjct: 59 TENVNYSGAYAAMGVDNSVRFEQFRNNFKVEIVRLEEDELEFDMIGIDPSLANAFRRILI 118
Query: 1182 AELPTMAIEKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKL 1003
AELPTMAIEKVL+ANNTS+IQDEVLAHRLGLIP++VDPRLF YM END PNEKNTIVFKL
Sbjct: 119 AELPTMAIEKVLIANNTSIIQDEVLAHRLGLIPIEVDPRLFEYMSENDVPNEKNTIVFKL 178
Query: 1002 HARCERGSPRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLD 823
HARC +GS R++V ++ELKWLPNGSELIL TE S++K KTYTSF+C QDTLPEF +
Sbjct: 179 HARCTKGSDRLRVLSSELKWLPNGSELILGTEHSASSSSAKPKTYTSFSCSQDTLPEFSN 238
Query: 822 NPIVPKHDDILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIED 643
+PI PK DI++AKLGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+DIED
Sbjct: 239 DPIAPKDADIIVAKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLRDIED 298
Query: 642 GMAEELVKKCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHF 463
AE LVKKCPV VFDIEDIGKG+KRATVARPR CTLCRECIR + WDK ++LRRV DHF
Sbjct: 299 DEAEALVKKCPVKVFDIEDIGKGKKRATVARPRICTLCRECIREEGWDKNVALRRVNDHF 358
Query: 462 IFTIESTGALPPEILFTEAVQILEEKCERVISELS 358
IFTIESTGALPPE+LFTEAV+ILEEKCERVI+ELS
Sbjct: 359 IFTIESTGALPPEVLFTEAVKILEEKCERVITELS 393
>ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
[Vitis vinifera] gi|296089944|emb|CBI39763.3| unnamed
protein product [Vitis vinifera]
Length = 372
Score = 616 bits (1589), Expect = e-174
Identities = 292/368 (79%), Positives = 334/368 (90%)
Frame = -2
Query: 1461 PVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSLRLEEFRNN 1282
P D+PDVPKG+LPPH++LQRTRVLC FDAPTHTE++QYSGAY++MGVDNSLR+++F NN
Sbjct: 5 PALDMPDVPKGQLPPHIELQRTRVLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQFCNN 64
Query: 1281 FRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVANNTSVIQDEVLAH 1102
FRVEVI+L+EDDMEFDMIGID ++ANAFRRILIAELPTMAIEKVL+ANNTS++QDEVLAH
Sbjct: 65 FRVEVIRLSEDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKVLIANNTSIVQDEVLAH 124
Query: 1101 RLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGSPRIKVTTNELKWLPNGSEL 922
RLGLIP+ DPRLF+ + END PNEKNTIVF LH RCERG PR+ V +NELKWLP+GSE
Sbjct: 125 RLGLIPINADPRLFDDLSENDTPNEKNTIVFNLHVRCERGGPRLTVKSNELKWLPHGSEF 184
Query: 921 ILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKLGPGQEIELEAHA 742
L+TE T STSK KTYTSF+C QD+LPEF D I PKH DI+IAKLGPGQEIELEAHA
Sbjct: 185 PLATENTTSSSTSKPKTYTSFSCSQDSLPEFSDKSIGPKHPDIIIAKLGPGQEIELEAHA 244
Query: 741 VKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIEDIGKGRKRA 562
VKG+GKTHAKWSPVATAWYRMLPEVVLLQ+IED AEELVKKCPV VFDIEDI KG+K+A
Sbjct: 245 VKGMGKTHAKWSPVATAWYRMLPEVVLLQEIEDEKAEELVKKCPVNVFDIEDIAKGKKKA 304
Query: 561 TVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIFTIESTGALPPEILFTEAVQILEEKC 382
TVARPR+CTLCRECIRGDDWDK +++RRVK+HFIFTIESTGALPPE+LF EAV++LE+KC
Sbjct: 305 TVARPRACTLCRECIRGDDWDKHVAIRRVKNHFIFTIESTGALPPEVLFNEAVKVLEDKC 364
Query: 381 ERVISELS 358
ERVI+ELS
Sbjct: 365 ERVITELS 372
>gb|EOY11969.1| RNA polymerase I subunit 43 isoform 1 [Theobroma cacao]
Length = 383
Score = 614 bits (1584), Expect = e-173
Identities = 291/374 (77%), Positives = 336/374 (89%)
Frame = -2
Query: 1479 QKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSLRL 1300
++ K +WDLPDVP G+LPPHL+LQRTRVLC DAP HTES+ YSGAYA+MGVDNSLRL
Sbjct: 10 EEKKKFSIWDLPDVPAGQLPPHLELQRTRVLCNKDAPIHTESVLYSGAYASMGVDNSLRL 69
Query: 1299 EEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVANNTSVIQ 1120
+ F +NFRVEV++LTE+DMEFDMIGIDAA+ANAFRRILIAELPTMAIEKVL+ANNTSV+Q
Sbjct: 70 DHFCHNFRVEVVRLTEEDMEFDMIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVVQ 129
Query: 1119 DEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGSPRIKVTTNELKWL 940
DEVLAHRLGLIP+ VDPRLF YM END+PNEKNTIVFKLH C+RGSPRI V ++ELKWL
Sbjct: 130 DEVLAHRLGLIPISVDPRLFEYMSENDQPNEKNTIVFKLHVHCKRGSPRITVKSDELKWL 189
Query: 939 PNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKLGPGQEI 760
PNGSELI + K DS SK +TYTSF+C QDTLPEF +NPI PK+ DI+I+KLGPGQEI
Sbjct: 190 PNGSELIKESRKVASDSASKPETYTSFSCSQDTLPEFANNPIAPKYPDIIISKLGPGQEI 249
Query: 759 ELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIEDIG 580
ELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+++ED +AE L KCPV VFDIED+G
Sbjct: 250 ELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDDLAEGLKSKCPVNVFDIEDLG 309
Query: 579 KGRKRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIFTIESTGALPPEILFTEAVQ 400
KG+KRATVARPR+CTLCRECIR ++W+K +++ RVKDHFIFTIESTGALPPE+LFTEAV+
Sbjct: 310 KGKKRATVARPRACTLCRECIRDEEWEKRVAIHRVKDHFIFTIESTGALPPEVLFTEAVK 369
Query: 399 ILEEKCERVISELS 358
ILE+KCERVI+ELS
Sbjct: 370 ILEDKCERVITELS 383
>ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Solanum lycopersicum]
Length = 393
Score = 614 bits (1584), Expect = e-173
Identities = 297/393 (75%), Positives = 344/393 (87%), Gaps = 4/393 (1%)
Frame = -2
Query: 1524 VGMVSEKEKSET----MKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTE 1357
+G +E E ++ +E+ TKV VWDLPD+PKGKLPPH++LQRTRVLC APT+TE
Sbjct: 1 MGTATENESMDSEGTSTQEETFTKVSVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTNTE 60
Query: 1356 SIQYSGAYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAE 1177
++ YSGAYAAMGVDNS+R E+FR+NF+VE+++L ED++EFDMIGID +LANAFRRILIAE
Sbjct: 61 NVNYSGAYAAMGVDNSVRFEQFRDNFKVEIVRLEEDELEFDMIGIDPSLANAFRRILIAE 120
Query: 1176 LPTMAIEKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHA 997
LPTMAIEKVL+ANNTS+IQDEVLAHRLGLIP+KVDPRLF YM END PNEKNTIVFKLH
Sbjct: 121 LPTMAIEKVLIANNTSIIQDEVLAHRLGLIPIKVDPRLFEYMSENDVPNEKNTIVFKLHV 180
Query: 996 RCERGSPRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNP 817
RC +GS R++V ++ELKWLPNGSELIL TE S++K KTYTSF+C QDT PEF D P
Sbjct: 181 RCTKGSDRLRVLSSELKWLPNGSELILGTEHSASSSSAKPKTYTSFSCSQDTRPEFSDEP 240
Query: 816 IVPKHDDILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGM 637
I PK DI++AKLGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEV+LL+DIED
Sbjct: 241 IAPKDADIIVAKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLRDIEDDE 300
Query: 636 AEELVKKCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIF 457
AE LVKKCP+ VFDIEDIGKG+KRATVARPR+CTLCRECIR + WDK ++LRRV DHFIF
Sbjct: 301 AEALVKKCPLKVFDIEDIGKGKKRATVARPRACTLCRECIREEGWDKNVALRRVNDHFIF 360
Query: 456 TIESTGALPPEILFTEAVQILEEKCERVISELS 358
TIESTGALPPE+LFTEAV+ILEEKCERVI+ELS
Sbjct: 361 TIESTGALPPEVLFTEAVKILEEKCERVITELS 393
>ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citrus clementina]
gi|557555856|gb|ESR65870.1| hypothetical protein
CICLE_v10008413mg [Citrus clementina]
Length = 421
Score = 585 bits (1508), Expect = e-164
Identities = 290/383 (75%), Positives = 332/383 (86%), Gaps = 1/383 (0%)
Frame = -2
Query: 1503 EKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAM 1324
E+ ET K+++ +WDLPDVP+ KLPPH++ QRTRV C DAP HTE++ YSGAYA+M
Sbjct: 42 EREETEKKKEAESFSIWDLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASM 100
Query: 1323 GVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLV 1144
GVDNSL+L+ F NNFRVEVI+LT+DDMEFD+IGIDAA+ANAFRRILIAELPTMAIEKVL+
Sbjct: 101 GVDNSLQLDHFCNNFRVEVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVLI 160
Query: 1143 ANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGSPRIKV 964
ANNTSVIQDEVLAHRLGLIP+ VDPRLF YM END NEKNTIVFKLH CERG PR+ V
Sbjct: 161 ANNTSVIQDEVLAHRLGLIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGGPRLTV 220
Query: 963 TTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIA 784
TNELKWLPNGSEL L T KP + +SK +TYTSF+ QD LPEF +NPI P DI IA
Sbjct: 221 KTNELKWLPNGSELPLET-KPDSNPSSKPRTYTSFSSSQDLLPEFSNNPIRPML-DITIA 278
Query: 783 KLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVG 604
+LGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPE+VLL+D+ED AE+LVK CPV
Sbjct: 279 RLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEIVLLEDVEDEDAEKLVKTCPVN 338
Query: 603 VFDIEDIGKGRKRATVARPRSCTLCRECIR-GDDWDKLLSLRRVKDHFIFTIESTGALPP 427
VFDIEDIG G+KRATVARPR+CTLCREC+R G++W+K +S+RRVKDHFIFTIESTGAL P
Sbjct: 339 VFDIEDIGSGKKRATVARPRACTLCRECLRCGEEWEKRVSIRRVKDHFIFTIESTGALSP 398
Query: 426 EILFTEAVQILEEKCERVISELS 358
E LFTEAV+ILE+KCERVI+ELS
Sbjct: 399 ETLFTEAVKILEDKCERVITELS 421
>ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Citrus sinensis]
Length = 382
Score = 583 bits (1502), Expect = e-164
Identities = 289/383 (75%), Positives = 332/383 (86%), Gaps = 1/383 (0%)
Frame = -2
Query: 1503 EKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAM 1324
E+ ET K+++ +WDLPDVP+ KLPPH++ QRTRV C DAP HTE++ YSGAYA+M
Sbjct: 3 EREETEKKKEGESFSIWDLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASM 61
Query: 1323 GVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLV 1144
GVDNSL+L+ F NNFRVEVI+LT+DDMEFD+IGIDAA+ANAFRRILIAELPTMAIEKVL+
Sbjct: 62 GVDNSLQLDHFCNNFRVEVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVLI 121
Query: 1143 ANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGSPRIKV 964
ANNTSVIQDEVLAHRLGLIP+ VDPRLF YM END NEKNTIVFKLH CERG PR+ V
Sbjct: 122 ANNTSVIQDEVLAHRLGLIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGGPRLTV 181
Query: 963 TTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIA 784
TNELKWLPNGSEL L T KP + SK +TYTSF+ QD+LPEF +NPI P DI IA
Sbjct: 182 KTNELKWLPNGSELPLET-KPDSNPLSKPRTYTSFSSSQDSLPEFSNNPIRPML-DITIA 239
Query: 783 KLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVG 604
+LGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPE+VLL+D+ED AE+LVK CPV
Sbjct: 240 RLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEIVLLEDVEDEDAEKLVKTCPVN 299
Query: 603 VFDIEDIGKGRKRATVARPRSCTLCRECIR-GDDWDKLLSLRRVKDHFIFTIESTGALPP 427
VFDIEDIG G+KRATVA+PR+CTLCREC+R G++W+K +S+RRVKDHFIFTIESTGAL P
Sbjct: 300 VFDIEDIGSGKKRATVAQPRACTLCRECLRCGEEWEKRVSIRRVKDHFIFTIESTGALSP 359
Query: 426 EILFTEAVQILEEKCERVISELS 358
E LFTEAV+ILE+KCERVI+ELS
Sbjct: 360 ETLFTEAVKILEDKCERVITELS 382
>ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, putative [Ricinus
communis] gi|223538024|gb|EEF39637.1| DNA-directed RNA
polymerase I/III subunits, putative [Ricinus communis]
Length = 374
Score = 579 bits (1492), Expect = e-162
Identities = 282/380 (74%), Positives = 328/380 (86%)
Frame = -2
Query: 1497 SETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGV 1318
S+ ++K K +WDLPDVP G+LPPHLQLQRTRV+C DAP HT++I YSGAYA++GV
Sbjct: 3 SKQENKEKNKKFSIWDLPDVPMGQLPPHLQLQRTRVVCKSDAPIHTDNIVYSGAYASIGV 62
Query: 1317 DNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVAN 1138
DNSL+L+ FR+NF+VEVI+LT+DDMEFDMIGIDAA+ANAFRRILI+ELPTMAIEKVL+AN
Sbjct: 63 DNSLQLDCFRDNFKVEVIQLTKDDMEFDMIGIDAAIANAFRRILISELPTMAIEKVLIAN 122
Query: 1137 NTSVIQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGSPRIKVTT 958
NTS+IQDEVLAHRLGLIP+ DPRLF Y+ ND PNEKNTIVFKLHA C+RG PR V +
Sbjct: 123 NTSLIQDEVLAHRLGLIPINADPRLFEYLSANDTPNEKNTIVFKLHASCKRGEPRRTVYS 182
Query: 957 NELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKL 778
ELKWLP GS+L+ +EK + SK TYTSF +QD +P+ P+ P D I++AKL
Sbjct: 183 EELKWLPGGSQLLKESEK----ADSKPSTYTSFTDKQDFIPK----PVSPSEDKIIVAKL 234
Query: 777 GPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVF 598
GPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+DIED +AEEL KKCPV VF
Sbjct: 235 GPGQEIELEAHAVKGLGKTHAKWSPVATAWYRMLPEVVLLEDIEDEIAEELTKKCPVNVF 294
Query: 597 DIEDIGKGRKRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIFTIESTGALPPEIL 418
DIEDIG G+KRATVARPR+CTLCRECIRG +WDK +SLRRVKDHFIFTIESTGALPPE+L
Sbjct: 295 DIEDIGNGKKRATVARPRACTLCRECIRGGEWDKRVSLRRVKDHFIFTIESTGALPPEVL 354
Query: 417 FTEAVQILEEKCERVISELS 358
FTEAV++LE+KCERVI+ELS
Sbjct: 355 FTEAVKVLEDKCERVITELS 374
>gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlisea aurea]
Length = 364
Score = 560 bits (1442), Expect = e-157
Identities = 269/364 (73%), Positives = 315/364 (86%)
Frame = -2
Query: 1458 VWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSLRLEEFRNNF 1279
+WDLPDVP G+LPPHLQLQRTRVLCT +APT+TE+IQYSGAYA MGVDNSL + FR NF
Sbjct: 1 LWDLPDVPGGELPPHLQLQRTRVLCTSEAPTYTENIQYSGAYALMGVDNSLPFDSFRENF 60
Query: 1278 RVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVANNTSVIQDEVLAHR 1099
RVE++ + E D+EFD+IGIDAA+ANAFRRILIAELPTMAIEKVL+ANNTSVI DEVL+HR
Sbjct: 61 RVEIVSMDEHDIEFDLIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVIPDEVLSHR 120
Query: 1098 LGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGSPRIKVTTNELKWLPNGSELI 919
LGLIPLKVDPR F++M E+DEPNEKNT+VFKLH CER R V T+ELKWLPNGSEL
Sbjct: 121 LGLIPLKVDPRPFSFMSEHDEPNEKNTVVFKLHVSCERKGSRKTVKTDELKWLPNGSELR 180
Query: 918 LSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKLGPGQEIELEAHAV 739
L TE+P +STSK +TYTSFNC QD++PEF + + P D+I IA+LGPGQEIELEAHAV
Sbjct: 181 LETERPNINSTSKIQTYTSFNCSQDSMPEFSGSTLRPTSDEITIARLGPGQEIELEAHAV 240
Query: 738 KGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIEDIGKGRKRAT 559
KG+GKTHAKWSPVATAWYR+LPE+ LL +I++ A+ELVKKCP VFDIED G RAT
Sbjct: 241 KGMGKTHAKWSPVATAWYRLLPEIALLDEIKNKKAKELVKKCPQKVFDIEDAGGDGIRAT 300
Query: 558 VARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIFTIESTGALPPEILFTEAVQILEEKCE 379
VARPR+C+LCRECIR ++W+KL+S+RRVKDHFIF IESTGALPPE+LFTEAV+ILEEKCE
Sbjct: 301 VARPRNCSLCRECIRDEEWEKLVSVRRVKDHFIFKIESTGALPPEVLFTEAVKILEEKCE 360
Query: 378 RVIS 367
++
Sbjct: 361 NAMA 364
>ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Cucumis sativus] gi|449522768|ref|XP_004168398.1|
PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC1-like [Cucumis sativus]
Length = 391
Score = 550 bits (1417), Expect = e-154
Identities = 273/368 (74%), Positives = 318/368 (86%), Gaps = 1/368 (0%)
Frame = -2
Query: 1458 VWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSLRLEEFRNNF 1279
+ +LPDVP KLPPH++LQRTRV C DAP HT++IQYSGA+A+MG DNSLRL+ FRNNF
Sbjct: 29 IMNLPDVPM-KLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNF 87
Query: 1278 RVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVANNTSVIQDEVLAHR 1099
++EVI L EDD+EFDMIGID ALANAFRRILI+E+PTMAIEKVL ANNTS++QDEVLAHR
Sbjct: 88 KIEVIDLKEDDIEFDMIGIDPALANAFRRILISEVPTMAIEKVLFANNTSIVQDEVLAHR 147
Query: 1098 LGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGSPRIKVTTNELKWLPNGSELI 919
LGL+P++VDPRLF Y + D PNE NTIVF+LHA CERG PR+ VT+ L WLPNGSE
Sbjct: 148 LGLVPIRVDPRLFKYS-DKDAPNENNTIVFRLHACCERGKPRLTVTSKALTWLPNGSEFP 206
Query: 918 LSTEKPTQDSTSKTKTYTSFNCRQDTL-PEFLDNPIVPKHDDILIAKLGPGQEIELEAHA 742
L ++K S SK KTYTSF+C Q+TL EF +NPI PK DI++A+LGPGQEIELEAHA
Sbjct: 207 LVSDKSV--SNSKPKTYTSFSCSQNTLSKEFSNNPIGPKDSDIILARLGPGQEIELEAHA 264
Query: 741 VKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIEDIGKGRKRA 562
VKG+GKTHAKWSPVATAWYRMLPEVVL+++IED +AEEL KKCPV VFDIEDI G+KRA
Sbjct: 265 VKGMGKTHAKWSPVATAWYRMLPEVVLMEEIEDELAEELEKKCPVNVFDIEDIA-GKKRA 323
Query: 561 TVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIFTIESTGALPPEILFTEAVQILEEKC 382
TVARPR CTLCRECIRGD W+K ++LRRVKDHFIF IESTGALPPE+LFTEAV+ILE+KC
Sbjct: 324 TVARPRDCTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC 383
Query: 381 ERVISELS 358
ER+I+ELS
Sbjct: 384 ERLIAELS 391
>ref|XP_002300385.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847643|gb|EEE85190.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 390
Score = 543 bits (1400), Expect = e-152
Identities = 272/388 (70%), Positives = 319/388 (82%), Gaps = 1/388 (0%)
Frame = -2
Query: 1518 MVSEKEKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSG 1339
M SE+E+ ++QK W+L DV +G+LPPH++ Q TRV C DAPT+TE++QYSG
Sbjct: 12 MSSEEEE----QQQKEEGFSYWNLKDVERGQLPPHIRKQGTRVYCKPDAPTNTETLQYSG 67
Query: 1338 AYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAI 1159
+YA+MGVDNSLRL+ FR NFR++VI L +D MEFDMIGIDAA+ANAFRRILI+E+PTMAI
Sbjct: 68 SYASMGVDNSLRLDSFRENFRIKVIALDKDKMEFDMIGIDAAVANAFRRILISEVPTMAI 127
Query: 1158 EKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGS 979
EKV +ANNTSVIQDEVLAHRLGLIP+KVDPRLF Y+ ND PNEKNTIV KLHARC RG
Sbjct: 128 EKVFIANNTSVIQDEVLAHRLGLIPIKVDPRLFEYLSANDTPNEKNTIVLKLHARCNRGQ 187
Query: 978 PRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHD 799
PR V + ELKWLPNGSE +EKP SK TYTSF+C QD+LPEF NPI +
Sbjct: 188 PRCSVYSQELKWLPNGSEFAKESEKP----DSKPSTYTSFSCGQDSLPEFAGNPI-STVE 242
Query: 798 DILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVK 619
DI++AKLGPGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEVVLL++I+ AEEL++
Sbjct: 243 DIILAKLGPGQEIELEAHAVKGMGKTHAKWSPVGTAWYRMFPEVVLLENIKGEDAEELIR 302
Query: 618 KCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIRGD-DWDKLLSLRRVKDHFIFTIEST 442
KCP GVFDIED G +K+A VA R+CTLCRECIRGD +W+K ++L RVKDHFIFTIEST
Sbjct: 303 KCPSGVFDIEDTGNAKKKAIVADSRACTLCRECIRGDEEWEKRVALHRVKDHFIFTIEST 362
Query: 441 GALPPEILFTEAVQILEEKCERVISELS 358
GALPPE+LFTEAV+ILE KCERVI+ELS
Sbjct: 363 GALPPEVLFTEAVKILEAKCERVITELS 390
>ref|NP_176261.1| RNA polymerase I subunit 43 [Arabidopsis thaliana]
gi|14423464|gb|AAK62414.1|AF386969_1 RNA polymerase
subunit (isoform B) [Arabidopsis thaliana]
gi|514324|gb|AAB00529.1| RNA polymerase subunit
[Arabidopsis thaliana] gi|2462755|gb|AAB71974.1| RNA
polymerase subunit (isoform B) [Arabidopsis thaliana]
gi|24899667|gb|AAN65048.1| RNA polymerase subunit
(isoform B) [Arabidopsis thaliana]
gi|332195585|gb|AEE33706.1| RNA polymerase I subunit 43
[Arabidopsis thaliana] gi|1586550|prf||2204246B RNA
polymerase
Length = 385
Score = 538 bits (1385), Expect = e-150
Identities = 273/393 (69%), Positives = 319/393 (81%), Gaps = 1/393 (0%)
Frame = -2
Query: 1533 NQTVGMVSEKEKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTES 1354
N+ +V+++EK E ++DLPDVP G LPPHL+LQRTRV+C D+ H +
Sbjct: 4 NEVTRIVTDEEKREAKNFN------IFDLPDVPTG-LPPHLELQRTRVVCKKDSNIHPTA 56
Query: 1353 IQYSGAYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAEL 1174
I +SGAY++MGVDNS+RLE F +F+V+VI LTE DM FDMIG+ A +ANAFRRIL+AEL
Sbjct: 57 ITFSGAYSSMGVDNSVRLENFSEDFKVDVISLTETDMVFDMIGVHAGIANAFRRILLAEL 116
Query: 1173 PTMAIEKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHAR 994
P+MAIEKV VANNTSVIQDEVLAHRLGLIP+ DPRLF Y+ END+PNEKNTIVFKLH +
Sbjct: 117 PSMAIEKVYVANNTSVIQDEVLAHRLGLIPIAADPRLFEYLSENDQPNEKNTIVFKLHVK 176
Query: 993 CERGSPRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPI 814
C +G PR KV T+ELKWLPNGSELI K + ST+ KTYTSFN QD+ PEF +NPI
Sbjct: 177 CLKGDPRRKVLTSELKWLPNGSELI----KESGGSTTTPKTYTSFNHSQDSFPEFAENPI 232
Query: 813 VPKHDDILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMA 634
P DILIAKLGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL++ E A
Sbjct: 233 RPTLKDILIAKLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLKEFEGKHA 292
Query: 633 EELVKKCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIR-GDDWDKLLSLRRVKDHFIF 457
EELVK CP VFDIED+G+GRKRATVARPR C+LCRECIR G +W+ + LRRVK+HFIF
Sbjct: 293 EELVKVCPKKVFDIEDMGQGRKRATVARPRDCSLCRECIRDGVEWEDQVDLRRVKNHFIF 352
Query: 456 TIESTGALPPEILFTEAVQILEEKCERVISELS 358
TIESTG+ PPE+LF EAV+ILE+KCERVISELS
Sbjct: 353 TIESTGSQPPEVLFNEAVKILEDKCERVISELS 385
>gb|EOY11972.1| RNA polymerase I subunit 43 isoform 4 [Theobroma cacao]
Length = 323
Score = 537 bits (1384), Expect = e-150
Identities = 256/323 (79%), Positives = 294/323 (91%)
Frame = -2
Query: 1326 MGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVL 1147
MGVDNSLRL+ F +NFRVEV++LTE+DMEFDMIGIDAA+ANAFRRILIAELPTMAIEKVL
Sbjct: 1 MGVDNSLRLDHFCHNFRVEVVRLTEEDMEFDMIGIDAAIANAFRRILIAELPTMAIEKVL 60
Query: 1146 VANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGSPRIK 967
+ANNTSV+QDEVLAHRLGLIP+ VDPRLF YM END+PNEKNTIVFKLH C+RGSPRI
Sbjct: 61 IANNTSVVQDEVLAHRLGLIPISVDPRLFEYMSENDQPNEKNTIVFKLHVHCKRGSPRIT 120
Query: 966 VTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILI 787
V ++ELKWLPNGSELI + K DS SK +TYTSF+C QDTLPEF +NPI PK+ DI+I
Sbjct: 121 VKSDELKWLPNGSELIKESRKVASDSASKPETYTSFSCSQDTLPEFANNPIAPKYPDIII 180
Query: 786 AKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPV 607
+KLGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+++ED +AE L KCPV
Sbjct: 181 SKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDDLAEGLKSKCPV 240
Query: 606 GVFDIEDIGKGRKRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIFTIESTGALPP 427
VFDIED+GKG+KRATVARPR+CTLCRECIR ++W+K +++ RVKDHFIFTIESTGALPP
Sbjct: 241 NVFDIEDLGKGKKRATVARPRACTLCRECIRDEEWEKRVAIHRVKDHFIFTIESTGALPP 300
Query: 426 EILFTEAVQILEEKCERVISELS 358
E+LFTEAV+ILE+KCERVI+ELS
Sbjct: 301 EVLFTEAVKILEDKCERVITELS 323
>ref|XP_004488284.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Cicer arietinum]
Length = 388
Score = 537 bits (1384), Expect = e-150
Identities = 268/391 (68%), Positives = 322/391 (82%), Gaps = 4/391 (1%)
Frame = -2
Query: 1518 MVSEKEKSETMKEQKTTKVP--VWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQY 1345
M S E+ E K + + +L DVP KL PHL+L +TRV+C+ DAP HT++I Y
Sbjct: 1 MSSSDEEQEQKKNDNGGGILDFIMNLEDVPS-KLSPHLELIKTRVVCSIDAPQHTDTINY 59
Query: 1344 SGAYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTM 1165
SGAYAA+GVDNS+RL+ F NF+VEV KLT+DD+EFDMIGID +LANAFRRILIAE+PTM
Sbjct: 60 SGAYAALGVDNSVRLDSFCRNFKVEVKKLTDDDIEFDMIGIDPSLANAFRRILIAEVPTM 119
Query: 1164 AIEKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMIE-NDEPNEKNTIVFKLHARCE 988
AIE+V +ANNTS+IQDEVL+HRLGLIP+ DP LF Y E NEKNTIVFKLH RCE
Sbjct: 120 AIERVYIANNTSIIQDEVLSHRLGLIPINADPTLFEYPDNAGGENNEKNTIVFKLHVRCE 179
Query: 987 RGSPRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVP 808
+G PRI V ++ELKWLPNGS+LI KP ++ SK KT+TSF+C QD+LPEF P+ P
Sbjct: 180 KGQPRIIVKSDELKWLPNGSDLIADDTKP--NAGSKPKTFTSFSCSQDSLPEFSKRPLGP 237
Query: 807 KHDDILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEE 628
+ DI++AKLGPGQEIELE HAVKGVGKTHAKWSPVATAWYRMLPEVVL++D++D +A+E
Sbjct: 238 TYPDIILAKLGPGQEIELEVHAVKGVGKTHAKWSPVATAWYRMLPEVVLMEDVKDELADE 297
Query: 627 LVKKCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIR-GDDWDKLLSLRRVKDHFIFTI 451
LV KCPV VFDIEDIGKGRKRATV +PR+CTLCRECIR G +W+ +SLRRVKDHFIFTI
Sbjct: 298 LVTKCPVNVFDIEDIGKGRKRATVVKPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTI 357
Query: 450 ESTGALPPEILFTEAVQILEEKCERVISELS 358
ESTGA+PP++LFT+AV+ILE+KCERVI+ELS
Sbjct: 358 ESTGAIPPDVLFTQAVKILEDKCERVITELS 388
>ref|XP_004498147.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Cicer arietinum]
Length = 388
Score = 536 bits (1382), Expect = e-150
Identities = 264/369 (71%), Positives = 313/369 (84%), Gaps = 2/369 (0%)
Frame = -2
Query: 1458 VWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSLRLEEFRNNF 1279
+ +L DVP KL PHL+L +TRV+C+ DAP HT++I YSGAYAA+GVDNS+RL+ F NF
Sbjct: 23 IMNLEDVPS-KLSPHLELIKTRVVCSIDAPQHTDTINYSGAYAALGVDNSVRLDSFCQNF 81
Query: 1278 RVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVANNTSVIQDEVLAHR 1099
+VEV KLT+DD+EFDMIGID +LANAFRRILIAE+PTMAIE+V +ANNTS+IQDEVL+HR
Sbjct: 82 KVEVKKLTDDDIEFDMIGIDPSLANAFRRILIAEVPTMAIERVYIANNTSIIQDEVLSHR 141
Query: 1098 LGLIPLKVDPRLFNYMIE-NDEPNEKNTIVFKLHARCERGSPRIKVTTNELKWLPNGSEL 922
LGLIP+ DP LF Y E NEKNTIVFKLH RCE+G PRI V ++ELKWLPNGS+L
Sbjct: 142 LGLIPINADPTLFEYPDNAGGENNEKNTIVFKLHVRCEKGQPRITVKSDELKWLPNGSDL 201
Query: 921 ILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKLGPGQEIELEAHA 742
I KP ++ SK KT+TSF+C QD+LPEF P+ P + DI++AKLGPGQEIELE HA
Sbjct: 202 IADDTKP--NAGSKPKTFTSFSCSQDSLPEFSKKPLGPTNPDIILAKLGPGQEIELEVHA 259
Query: 741 VKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIEDIGKGRKRA 562
VKGVGKTHAKWSPVATAWYRMLPEVVL +D+ D +A+ELV KCPV VFDIEDIGKGRKRA
Sbjct: 260 VKGVGKTHAKWSPVATAWYRMLPEVVLTEDVTDELADELVTKCPVNVFDIEDIGKGRKRA 319
Query: 561 TVARPRSCTLCRECIR-GDDWDKLLSLRRVKDHFIFTIESTGALPPEILFTEAVQILEEK 385
TV +PR+CTLCRECIR G +W+ +SLRRVKDHFIFTIESTGA+PPE+LFT+AV+ILE+K
Sbjct: 320 TVVKPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPEVLFTQAVKILEDK 379
Query: 384 CERVISELS 358
CERVI+ELS
Sbjct: 380 CERVITELS 388
>ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata]
gi|297333970|gb|EFH64388.1| ATRPAC43 [Arabidopsis lyrata
subsp. lyrata]
Length = 385
Score = 534 bits (1376), Expect = e-149
Identities = 266/368 (72%), Positives = 306/368 (83%), Gaps = 1/368 (0%)
Frame = -2
Query: 1458 VWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSLRLEEFRNNF 1279
++DLPDVP G LPPHL+LQRTR +C DAP H S+ YSGAYA+MGVDNS+RLE F +F
Sbjct: 23 IFDLPDVPTG-LPPHLELQRTRAVCKNDAPIHPTSVLYSGAYASMGVDNSVRLENFSEDF 81
Query: 1278 RVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVANNTSVIQDEVLAHR 1099
+V+VI LTE M FDMIG+ A +ANAFRRIL+AELP+MAIEKV VANNTSVIQDEVLAHR
Sbjct: 82 KVDVISLTETYMVFDMIGVPAGIANAFRRILLAELPSMAIEKVFVANNTSVIQDEVLAHR 141
Query: 1098 LGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGSPRIKVTTNELKWLPNGSELI 919
LGLIP+ DPRLF Y+ END+PNEKNTIVFKLH +C +G PR KV T+ELKWLPNGSEL+
Sbjct: 142 LGLIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKCPKGDPRRKVLTSELKWLPNGSELV 201
Query: 918 LSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKLGPGQEIELEAHAV 739
K + T+K KTYTSF+ QD+ P F NPI P DILIAKLGPGQEIELEAHAV
Sbjct: 202 ----KESGGLTTKPKTYTSFSHSQDSFPGFAKNPITPSFQDILIAKLGPGQEIELEAHAV 257
Query: 738 KGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIEDIGKGRKRAT 559
KG+GKTHAKWSPVATAWYRMLPEV+LL++ E AEELVK CP VFDIED+G+GRKRAT
Sbjct: 258 KGIGKTHAKWSPVATAWYRMLPEVILLKEFEGKHAEELVKVCPKKVFDIEDMGQGRKRAT 317
Query: 558 VARPRSCTLCRECIR-GDDWDKLLSLRRVKDHFIFTIESTGALPPEILFTEAVQILEEKC 382
VARPR C+LCRECIR G +W K + LRRVK+HFIFTIESTG+ PP++LF EAV+ILE+KC
Sbjct: 318 VARPRDCSLCRECIREGVEWAKQVDLRRVKNHFIFTIESTGSQPPDVLFNEAVKILEDKC 377
Query: 381 ERVISELS 358
ERVISELS
Sbjct: 378 ERVISELS 385
>gb|EXB51013.1| DNA-directed RNA polymerases I and III subunit RPAC1 [Morus
notabilis]
Length = 411
Score = 534 bits (1375), Expect = e-149
Identities = 280/411 (68%), Positives = 332/411 (80%), Gaps = 15/411 (3%)
Frame = -2
Query: 1545 RGSQNQTVG---MVSEKE-KSETMKEQKTTKVPV-------W--DLPDVPKGKLPPHLQL 1405
RG + QT+ + +E E ++ET E +++ V W L DVP GKLPPHL+
Sbjct: 4 RGVKQQTMSESTLETETETETETGTESESSSVDPKGGGGLRWLEKLSDVPMGKLPPHLEF 63
Query: 1404 QRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIG 1225
QRT V C DAP HT++IQYSGAYA++GVDNS+R++ F +NFRVEV++LTEDDMEFDMIG
Sbjct: 64 QRTHVECKADAPLHTDTIQYSGAYASLGVDNSVRMDSFCDNFRVEVMRLTEDDMEFDMIG 123
Query: 1224 IDAALANAFRRILIAELPTMAIEKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMIE 1045
ID ALANAFRRILI+E+PTMAIE+VL+ANNTSV+QDEVLAHRLGLIP+ VDPRLF +
Sbjct: 124 IDPALANAFRRILISEVPTMAIERVLIANNTSVVQDEVLAHRLGLIPINVDPRLFEF-AG 182
Query: 1044 NDEPNEKNTIVFKLHARCERGSPRIKVTTNELKWLPNGSELILSTE-KPTQDSTSKTKTY 868
N+ PNEKNTIVFKLH R + P V +NEL W P GSE +L++E + D++SK +TY
Sbjct: 183 NNTPNEKNTIVFKLHVRRKPNEPS-SVKSNELIWSPKGSEFLLASEDSKSADTSSKPRTY 241
Query: 867 TSFNCRQDTLPEFLDNPIVPKHDDILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAW 688
TSF CRQD+LPEF +N I ++ILIAKLGPGQEIELEAHAVKG+GKTHAKWSPVATAW
Sbjct: 242 TSFTCRQDSLPEFSNNAI-KVMENILIAKLGPGQEIELEAHAVKGIGKTHAKWSPVATAW 300
Query: 687 YRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIR-G 511
YRMLPEVVLLQ++ED AEEL KCPVGVFDIEDIGKGRKRATVARPR CTLCRECIR G
Sbjct: 301 YRMLPEVVLLQEVEDEAAEELKAKCPVGVFDIEDIGKGRKRATVARPRGCTLCRECIRGG 360
Query: 510 DDWDKLLSLRRVKDHFIFTIESTGALPPEILFTEAVQILEEKCERVISELS 358
W+ +SLRR K+HFIF IESTGALPPE+LFTEAV+ILE+KCERVI++LS
Sbjct: 361 QQWEDRVSLRRRKNHFIFNIESTGALPPEVLFTEAVKILEDKCERVIADLS 411
>ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
[Glycine max]
Length = 393
Score = 531 bits (1369), Expect = e-148
Identities = 270/390 (69%), Positives = 319/390 (81%), Gaps = 5/390 (1%)
Frame = -2
Query: 1512 SEKEKSETMKEQKTTKVP--VWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSG 1339
S + E+M EQ + L +VP KLPPHL+L +TRVLC DAP HT+++QYSG
Sbjct: 8 SSSSEDESMSEQSNELGLDFILSLDNVPS-KLPPHLELFKTRVLCNNDAPVHTDTVQYSG 66
Query: 1338 AYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAI 1159
AYA MGVDNS+RL+ F NF+VEV +LT+ D+EFDMIGID A+ANAFRRILIAE+PTMAI
Sbjct: 67 AYAIMGVDNSVRLDSFCENFKVEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAI 126
Query: 1158 EKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMIEN--DEPNEKNTIVFKLHARCER 985
E+V +ANNTSV+QDEVL+HRLGLIP++ DPRLF Y EN D+ NEKNTIVFKLH RC+
Sbjct: 127 ERVYIANNTSVVQDEVLSHRLGLIPIRADPRLFEYP-ENAGDDKNEKNTIVFKLHVRCQV 185
Query: 984 GSPRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPK 805
G PRI V +++LKWLPNGSEL KP ++ SK KT+TSF C QD+LPEF +N I
Sbjct: 186 GQPRITVKSDKLKWLPNGSELPCEDVKP--NAGSKPKTFTSFTCSQDSLPEFSNNSIGLT 243
Query: 804 HDDILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEEL 625
+ DI++AKLGPGQEIELEAHAVKG GKTHAKWSPVAT WYRMLPEVVLL+D+ED +AEEL
Sbjct: 244 YSDIILAKLGPGQEIELEAHAVKGTGKTHAKWSPVATTWYRMLPEVVLLKDVEDELAEEL 303
Query: 624 VKKCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIR-GDDWDKLLSLRRVKDHFIFTIE 448
KCPV VFDIEDIGKG++RA VARPR CTLCRECIR G +W+ +SLRRVK+HFIFTIE
Sbjct: 304 KNKCPVNVFDIEDIGKGKRRAKVARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIE 363
Query: 447 STGALPPEILFTEAVQILEEKCERVISELS 358
STGALPPE+LFTEAV+ILE+KCERVI+ELS
Sbjct: 364 STGALPPEVLFTEAVKILEDKCERVITELS 393
>ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycine max]
gi|255637183|gb|ACU18922.1| unknown [Glycine max]
Length = 388
Score = 531 bits (1368), Expect = e-148
Identities = 270/392 (68%), Positives = 321/392 (81%), Gaps = 5/392 (1%)
Frame = -2
Query: 1518 MVSEKEKSETMKEQKTTKVP--VWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQY 1345
M S + E+M EQ + L +VP KLPPHL+L +TRVLC DAP HT+++QY
Sbjct: 1 MSSSSSEDESMSEQSNELGLDFILSLDNVPS-KLPPHLELFKTRVLCNNDAPVHTDTVQY 59
Query: 1344 SGAYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTM 1165
SGAYA +GVDNS+RL+ F NF+VEV +LT+ D+EFDMIGID A+ANAFRRILIAE+PTM
Sbjct: 60 SGAYAILGVDNSVRLDSFCENFKVEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTM 119
Query: 1164 AIEKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMIEN--DEPNEKNTIVFKLHARC 991
AIE+V +ANNTSV+QDEVL+HRLGLIP++ DPRLF Y EN D+ NEKNTIVFKLH RC
Sbjct: 120 AIERVYIANNTSVVQDEVLSHRLGLIPIRADPRLFEYP-ENAGDDKNEKNTIVFKLHVRC 178
Query: 990 ERGSPRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIV 811
+ G PRI V +++LKWLPNGSEL KP ++ SK KT+TSF C QD+LPEF +N I
Sbjct: 179 QVGQPRITVKSDKLKWLPNGSELPCEGVKP--NAGSKPKTFTSFTCSQDSLPEFSNNSIG 236
Query: 810 PKHDDILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAE 631
+ DI++AKLGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+ +ED +AE
Sbjct: 237 LTYSDIILAKLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLEAVEDELAE 296
Query: 630 ELVKKCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIR-GDDWDKLLSLRRVKDHFIFT 454
EL KCPV VFDIEDIGKG++RA VARPR CTLCRECIR G +W+ +SLRRVK+HFIFT
Sbjct: 297 ELKNKCPVNVFDIEDIGKGKRRAKVARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFT 356
Query: 453 IESTGALPPEILFTEAVQILEEKCERVISELS 358
IESTGALPPE+LFTEAV+ILE+KCERVI+ELS
Sbjct: 357 IESTGALPPEVLFTEAVKILEDKCERVITELS 388
>gb|EMJ06508.1| hypothetical protein PRUPE_ppa006811mg [Prunus persica]
Length = 394
Score = 529 bits (1363), Expect = e-147
Identities = 267/395 (67%), Positives = 317/395 (80%), Gaps = 1/395 (0%)
Frame = -2
Query: 1539 SQNQTVGMVSEKEKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHT 1360
S N+ SE E ++++KE T + + +L DVP G+LP +++ QRTRV C DAP HT
Sbjct: 3 SDNEDTTSSSESEGADSVKENATLEF-IENLSDVPMGRLPSNIEFQRTRVDCKADAPIHT 61
Query: 1359 ESIQYSGAYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIA 1180
++ QYSGAY++M V+NS L+ F +NFRVEVI+LTED+MEFDMIGID ALANAFRRILI+
Sbjct: 62 DTFQYSGAYSSMRVENSF-LDNFCDNFRVEVIRLTEDEMEFDMIGIDPALANAFRRILIS 120
Query: 1179 ELPTMAIEKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLH 1000
E+PTMAIEKVL+ANNTSVIQDEVLAHRLGLIP+K DPRLF Y EN+ +EKNTIVFKLH
Sbjct: 121 EVPTMAIEKVLIANNTSVIQDEVLAHRLGLIPIKADPRLFEYA-ENNTASEKNTIVFKLH 179
Query: 999 ARCERGSPRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDN 820
CER R+ V + EL WLPNGSE L ++ S+SK KTYTSF C QD+LPEF N
Sbjct: 180 VCCERSGQRLSVKSKELIWLPNGSEFPLESQDSKTGSSSKPKTYTSFTCSQDSLPEFSSN 239
Query: 819 PIVPKHDDILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDG 640
PI P DILIA+LGPGQEIELEAHAVKG+GKTH+KWSPV WY+MLPE+VLL+DIED
Sbjct: 240 PIAPALGDILIARLGPGQEIELEAHAVKGIGKTHSKWSPVTPVWYKMLPEIVLLEDIEDQ 299
Query: 639 MAEELVKKCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIR-GDDWDKLLSLRRVKDHF 463
AE+LV CPV VFDIEDIGKG+KRATVARPR+CTLCRECIR G W+ +SL+R KDHF
Sbjct: 300 QAEKLVAICPVKVFDIEDIGKGKKRATVARPRACTLCRECIREGKGWENAISLQRKKDHF 359
Query: 462 IFTIESTGALPPEILFTEAVQILEEKCERVISELS 358
IFTIES+G PPE+L TEAV+ILEEKC+RVIS+LS
Sbjct: 360 IFTIESSGVFPPEVLVTEAVKILEEKCDRVISDLS 394
>ref|XP_006414263.1| hypothetical protein EUTSA_v10025407mg [Eutrema salsugineum]
gi|557115433|gb|ESQ55716.1| hypothetical protein
EUTSA_v10025407mg [Eutrema salsugineum]
Length = 394
Score = 522 bits (1344), Expect = e-145
Identities = 264/383 (68%), Positives = 308/383 (80%), Gaps = 18/383 (4%)
Frame = -2
Query: 1452 DLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSLRLEEFRNNFRV 1273
D PDVP +LPPHL+LQRTRVLC DAP HT S+QYSGAY +GVDNS++LE F NFRV
Sbjct: 17 DHPDVP-ARLPPHLELQRTRVLCKNDAPIHTSSVQYSGAYKFVGVDNSVKLESFSENFRV 75
Query: 1272 EVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVANNTSVIQDEVLAHRLG 1093
+VI ++EFDMIGIDAA+ANAFRRIL+AELPTMAIEKV VANNTSV+QDEVLA R+G
Sbjct: 76 DVISEDGMELEFDMIGIDAAIANAFRRILLAELPTMAIEKVFVANNTSVVQDEVLAQRMG 135
Query: 1092 LIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGSPRIKVTTNELKWLPNGSELILS 913
LIP+ DPRLF Y+ END+PNEKNTIVFKLHA+CE+G PR+KV T EL WLPNGSELI
Sbjct: 136 LIPIAADPRLFEYLSENDQPNEKNTIVFKLHAKCEKGEPRLKVLTKELIWLPNGSELI-- 193
Query: 912 TEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKLGPGQEIELEAHAVKG 733
K + STSK +TYTSF+ QD+ PEF +NPI P + DILIAKLGPGQEIELEAHAVKG
Sbjct: 194 --KESGGSTSKPRTYTSFSRSQDSFPEFANNPITPSYPDILIAKLGPGQEIELEAHAVKG 251
Query: 732 VGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIEDIGKGRKRATVA 553
+GKTHAKWSPVATAWYRMLPEV+LL++ E AE+LVK C VFDIED+G GRK+ATVA
Sbjct: 252 IGKTHAKWSPVATAWYRMLPEVILLKEFEGEDAEKLVKACAEKVFDIEDMGNGRKKATVA 311
Query: 552 RPRSCTLCREC-------------IRGDD-----WDKLLSLRRVKDHFIFTIESTGALPP 427
RPR CTLCREC ++G+D W ++LRRVK+HFIF IESTG+LPP
Sbjct: 312 RPRQCTLCRECLSEEFGEPIVKPILKGEDKSKREWVDNVALRRVKNHFIFKIESTGSLPP 371
Query: 426 EILFTEAVQILEEKCERVISELS 358
++LFTEAV+ILE+KCERVI+ LS
Sbjct: 372 DVLFTEAVKILEDKCERVIAVLS 394