BLASTX nr result
ID: Rehmannia26_contig00009087
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00009087
(415 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX19931.1| viral replicase [Nandina mosaic virus] 278 4e-73
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 273 1e-71
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ... 272 4e-71
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ... 272 4e-71
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ... 272 4e-71
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ... 272 4e-71
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ... 272 4e-71
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ... 272 4e-71
gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago a... 271 9e-71
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1... 247 1e-63
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi... 231 1e-58
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo... 180 2e-43
ref|NP_044330.1| replicase [Papaya mosaic virus] gi|139137|sp|P2... 176 3e-42
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus] 171 9e-41
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5... 171 9e-41
gb|AFM77886.1| replicase [Hosta virus X] 169 5e-40
gb|ACS28228.1| replicase [Alternanthera mosaic virus] 167 2e-39
gb|ACO35593.1| RNA-dependent RNA polymerase [Alternanthera mosai... 167 2e-39
gb|ACS28233.1| replicase [Alternanthera mosaic virus] 166 3e-39
ref|YP_459944.1| replicase [Alternanthera mosaic virus] gi|62082... 165 5e-39
>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
Length = 1368
Score = 278 bits (712), Expect = 4e-73
Identities = 132/138 (95%), Positives = 135/138 (97%)
Frame = +1
Query: 1 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK 180
VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK
Sbjct: 159 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK 218
Query: 181 YDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD 360
YDQLEWLT+GHL A NQPT+TAQRLETKGANHLFIFQRGNYLTPERRTFTTT+ YVTVPD
Sbjct: 219 YDQLEWLTIGHLQAPNQPTVTAQRLETKGANHLFIFQRGNYLTPERRTFTTTDPYVTVPD 278
Query: 361 IFLPEKYNCRTPISKTIM 414
IFLPEKYNCRTPISKTIM
Sbjct: 279 IFLPEKYNCRTPISKTIM 296
>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 273 bits (699), Expect = 1e-71
Identities = 130/138 (94%), Positives = 132/138 (95%)
Frame = +1
Query: 1 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK 180
VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK
Sbjct: 159 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK 218
Query: 181 YDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD 360
Y QLEWLTVGHLT Q T+TAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD
Sbjct: 219 YSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD 278
Query: 361 IFLPEKYNCRTPISKTIM 414
+FLP KYNCRTPISKTIM
Sbjct: 279 VFLPAKYNCRTPISKTIM 296
>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 272 bits (695), Expect = 4e-71
Identities = 130/138 (94%), Positives = 131/138 (94%)
Frame = +1
Query: 1 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK 180
VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH
Sbjct: 159 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHN 218
Query: 181 YDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD 360
Y QLEWLTVGHLT Q T+TAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD
Sbjct: 219 YSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD 278
Query: 361 IFLPEKYNCRTPISKTIM 414
IFLP KYNCRTPISKTIM
Sbjct: 279 IFLPAKYNCRTPISKTIM 296
>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 272 bits (695), Expect = 4e-71
Identities = 130/138 (94%), Positives = 131/138 (94%)
Frame = +1
Query: 1 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK 180
VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH
Sbjct: 159 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHN 218
Query: 181 YDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD 360
Y QLEWLTVGHLT Q T+TAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD
Sbjct: 219 YSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD 278
Query: 361 IFLPEKYNCRTPISKTIM 414
IFLP KYNCRTPISKTIM
Sbjct: 279 IFLPAKYNCRTPISKTIM 296
>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 272 bits (695), Expect = 4e-71
Identities = 130/138 (94%), Positives = 131/138 (94%)
Frame = +1
Query: 1 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK 180
VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH
Sbjct: 159 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHN 218
Query: 181 YDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD 360
Y QLEWLTVGHLT Q T+TAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD
Sbjct: 219 YSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD 278
Query: 361 IFLPEKYNCRTPISKTIM 414
IFLP KYNCRTPISKTIM
Sbjct: 279 IFLPAKYNCRTPISKTIM 296
>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 272 bits (695), Expect = 4e-71
Identities = 130/138 (94%), Positives = 131/138 (94%)
Frame = +1
Query: 1 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK 180
VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH
Sbjct: 159 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHN 218
Query: 181 YDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD 360
Y QLEWLTVGHLT Q T+TAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD
Sbjct: 219 YSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD 278
Query: 361 IFLPEKYNCRTPISKTIM 414
IFLP KYNCRTPISKTIM
Sbjct: 279 IFLPAKYNCRTPISKTIM 296
>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 272 bits (695), Expect = 4e-71
Identities = 130/138 (94%), Positives = 131/138 (94%)
Frame = +1
Query: 1 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK 180
VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH
Sbjct: 159 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHN 218
Query: 181 YDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD 360
Y QLEWLTVGHLT Q T+TAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD
Sbjct: 219 YSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD 278
Query: 361 IFLPEKYNCRTPISKTIM 414
IFLP KYNCRTPISKTIM
Sbjct: 279 IFLPAKYNCRTPISKTIM 296
>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 272 bits (695), Expect = 4e-71
Identities = 130/138 (94%), Positives = 131/138 (94%)
Frame = +1
Query: 1 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK 180
VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH
Sbjct: 159 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHN 218
Query: 181 YDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD 360
Y QLEWLTVGHLT Q T+TAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD
Sbjct: 219 YSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD 278
Query: 361 IFLPEKYNCRTPISKTIM 414
IFLP KYNCRTPISKTIM
Sbjct: 279 IFLPAKYNCRTPISKTIM 296
>gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 669
Score = 271 bits (692), Expect = 9e-71
Identities = 130/138 (94%), Positives = 132/138 (95%)
Frame = +1
Query: 1 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK 180
VTALFAHSPKLQTLYATLVLPPEALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASYFHK
Sbjct: 159 VTALFAHSPKLQTLYATLVLPPEALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASYFHK 218
Query: 181 YDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD 360
Y QLEWLTVGHLTA T+TAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD
Sbjct: 219 YSQLEWLTVGHLTAPGLLTVTAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD 278
Query: 361 IFLPEKYNCRTPISKTIM 414
IFLP KYNCRTPISKTIM
Sbjct: 279 IFLPAKYNCRTPISKTIM 296
>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
[Plantago asiatica mosaic virus]
Length = 1385
Score = 247 bits (630), Expect = 1e-63
Identities = 119/138 (86%), Positives = 124/138 (89%)
Frame = +1
Query: 1 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK 180
+TALFAHSP+LQTLYATLVLPPE RSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK
Sbjct: 159 LTALFAHSPRLQTLYATLVLPPEPSTS-RSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK 217
Query: 181 YDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD 360
YDQLEWLTVGHLTA PT+TAQRLETKGANHLFIFQRGNY+TPERRTF T + YVTVP
Sbjct: 218 YDQLEWLTVGHLTAPGCPTVTAQRLETKGANHLFIFQRGNYITPERRTFATNDQYVTVPH 277
Query: 361 IFLPEKYNCRTPISKTIM 414
IFLPE YNCRTPISKT M
Sbjct: 278 IFLPENYNCRTPISKTTM 295
>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
[Tulip virus X]
Length = 1361
Score = 231 bits (588), Expect = 1e-58
Identities = 108/137 (78%), Positives = 122/137 (89%)
Frame = +1
Query: 1 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK 180
+T+LFA SPKLQTLYAT+VLPPEALYRLRSLYP++YTLTYS+DGFMYIPGGHAGASY+HK
Sbjct: 159 ITSLFARSPKLQTLYATMVLPPEALYRLRSLYPEVYTLTYSDDGFMYIPGGHAGASYYHK 218
Query: 181 YDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD 360
YDQL+WLT G+L + T+TAQRLETKGANHLFIFQRG YLTPERRTFTT YVTVP+
Sbjct: 219 YDQLQWLTAGYL-ISESTTVTAQRLETKGANHLFIFQRGRYLTPERRTFTTATSYVTVPE 277
Query: 361 IFLPEKYNCRTPISKTI 411
IFLP N RTPI+KT+
Sbjct: 278 IFLPSSANARTPITKTL 294
>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
RNA polymerase [Cassava common mosaic virus]
gi|1587823|prf||2207297A ORF 1
Length = 1449
Score = 180 bits (456), Expect = 2e-43
Identities = 87/149 (58%), Positives = 106/149 (71%), Gaps = 12/149 (8%)
Frame = +1
Query: 1 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK 180
V LFA SPKL+T YAT+VLPPEAL+++ SLYPQIYTL Y E GF+Y PGGHAGASY+H+
Sbjct: 159 VGTLFARSPKLKTFYATMVLPPEALHKMNSLYPQIYTLQYKEKGFIYTPGGHAGASYYHE 218
Query: 181 YDQLEWLTVGHLT--AANQP----------TITAQRLETKGANHLFIFQRGNYLTPERRT 324
Y QL WL VG + N P +TAQR+ETKGANHLF+FQRG TP+ R+
Sbjct: 219 YSQLGWLDVGLIEYFEENAPDGSEYLGTKWAVTAQRIETKGANHLFVFQRGRLQTPQMRS 278
Query: 325 FTTTEHYVTVPDIFLPEKYNCRTPISKTI 411
T Y+TVP +FLP+K+N R P+ KTI
Sbjct: 279 IATNTQYITVPAVFLPKKFNSRQPLKKTI 307
>ref|NP_044330.1| replicase [Papaya mosaic virus] gi|139137|sp|P20951.1|RDRP_PMV
RecName: Full=RNA replication protein; AltName: Full=176
kDa protein; AltName: Full=ORF1 protein; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=Helicase gi|222331|dbj|BAA03050.1| unnamed
protein product [Papaya mosaic virus]
gi|409915202|gb|AFV46461.1| replicase [Papaya mosaic
virus]
Length = 1547
Score = 176 bits (446), Expect = 3e-42
Identities = 84/140 (60%), Positives = 106/140 (75%), Gaps = 4/140 (2%)
Frame = +1
Query: 1 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK 180
+ +F SPKLQTLYAT+VLPPEAL+RL SL+P IY L + ++ F+Y PGGHAGA+Y HK
Sbjct: 161 IERIFKSSPKLQTLYATMVLPPEALHRLHSLHPGIYELEFHQEHFIYKPGGHAGAAYIHK 220
Query: 181 YDQLEWLTVGHLTAANQP----TITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYV 348
Y+QLEW+ VG A++ +T+Q LETKGANHLFIFQRG +LTPE R F+T YV
Sbjct: 221 YEQLEWIKVGRFKWADEKGLTHMVTSQILETKGANHLFIFQRGRFLTPELRCFSTETKYV 280
Query: 349 TVPDIFLPEKYNCRTPISKT 408
T+P IFLP+++N R PI KT
Sbjct: 281 TMPPIFLPKQFNARLPIKKT 300
>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 171 bits (433), Expect = 9e-41
Identities = 80/138 (57%), Positives = 101/138 (73%)
Frame = +1
Query: 1 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK 180
+T LF SP L TLYAT+VLPPEA ++LRSL+P +YTL Y +D F+Y+PGGHAGASY H
Sbjct: 159 LTDLFDRSPHLNTLYATMVLPPEAKHKLRSLHPLVYTLQYLKDHFIYLPGGHAGASYCHT 218
Query: 181 YDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD 360
Y QL+WL VGH+ + + ITAQR+ETK ANHLF+F RG TP R+F Y T+P
Sbjct: 219 YSQLQWLDVGHIVSPSGNCITAQRIETKAANHLFVFIRGRLNTPPMRSFAPMRAYCTLPA 278
Query: 361 IFLPEKYNCRTPISKTIM 414
IFLP ++N RTP +KT +
Sbjct: 279 IFLPTEFNSRTPYTKTFL 296
>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus]
gi|56792005|gb|AAW30448.1| viral replicase [Hydrangea
ringspot virus]
Length = 1386
Score = 171 bits (433), Expect = 9e-41
Identities = 80/138 (57%), Positives = 101/138 (73%)
Frame = +1
Query: 1 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK 180
+T LF SP L TLYAT+VLPPEA ++LRSL+P +YTL Y +D F+Y+PGGHAGASY H
Sbjct: 159 LTDLFDRSPHLNTLYATMVLPPEAKHKLRSLHPLVYTLQYLKDHFIYLPGGHAGASYCHT 218
Query: 181 YDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD 360
Y QL+WL VGH+ + + ITAQR+ETK ANHLF+F RG TP R+F Y T+P
Sbjct: 219 YSQLQWLDVGHIVSPSGNCITAQRIETKAANHLFVFIRGRLNTPPMRSFAPMRAYCTLPA 278
Query: 361 IFLPEKYNCRTPISKTIM 414
IFLP ++N RTP +KT +
Sbjct: 279 IFLPTEFNSRTPYTKTFL 296
>gb|AFM77886.1| replicase [Hosta virus X]
Length = 1473
Score = 169 bits (427), Expect = 5e-40
Identities = 80/135 (59%), Positives = 98/135 (72%)
Frame = +1
Query: 10 LFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQ 189
LF +P L TLYAT+VLPPEA+YR+ S+YP+IY + Y EDGF+YIPGGH GA+YFH YD
Sbjct: 161 LFLKNPNLNTLYATMVLPPEAMYRMASIYPEIYQIQYQEDGFLYIPGGHGGAAYFHTYDT 220
Query: 190 LEWLTVGHLTAANQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFL 369
L WL VG A + T+T Q+LETKGANHLFI QR + TP+ RTF +VT+P+IFL
Sbjct: 221 LTWLRVGQF-QAKEFTLTFQKLETKGANHLFIIQRADLKTPKYRTFVPRRKWVTLPNIFL 279
Query: 370 PEKYNCRTPISKTIM 414
P+ N R PI K M
Sbjct: 280 PKHTNARKPILKQTM 294
>gb|ACS28228.1| replicase [Alternanthera mosaic virus]
Length = 1541
Score = 167 bits (422), Expect = 2e-39
Identities = 79/141 (56%), Positives = 101/141 (71%), Gaps = 4/141 (2%)
Frame = +1
Query: 1 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK 180
+ +F S KLQTLYAT+VLPPEA++R+ S++P IY L + E F+Y PGGHAGASY H+
Sbjct: 161 IREIFTSSQKLQTLYATMVLPPEAMHRMHSIHPSIYELEFHEKNFIYKPGGHAGASYCHE 220
Query: 181 YDQLEWLTVGHLTAANQP----TITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYV 348
Y QL+WL VG ++ +T+Q LETKGANHLF+FQRGN+ TP RTF +V
Sbjct: 221 YSQLQWLKVGKFEWCDKKYQKHYVTSQILETKGANHLFVFQRGNFATPTYRTFGVETKFV 280
Query: 349 TVPDIFLPEKYNCRTPISKTI 411
T+P IFLP+KYN R PI KT+
Sbjct: 281 TLPPIFLPKKYNARYPIKKTV 301
>gb|ACO35593.1| RNA-dependent RNA polymerase [Alternanthera mosaic virus]
Length = 1541
Score = 167 bits (422), Expect = 2e-39
Identities = 79/141 (56%), Positives = 101/141 (71%), Gaps = 4/141 (2%)
Frame = +1
Query: 1 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK 180
+ +F S KLQTLYAT+VLPPEA++R+ S++P IY L + E F+Y PGGHAGASY H+
Sbjct: 161 IREIFTSSQKLQTLYATMVLPPEAMHRMHSIHPSIYELEFHEKNFIYKPGGHAGASYCHE 220
Query: 181 YDQLEWLTVGHLTAANQP----TITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYV 348
Y QL+WL VG ++ +T+Q LETKGANHLF+FQRGN+ TP RTF +V
Sbjct: 221 YSQLQWLKVGKFEWCDKKYQKHHVTSQILETKGANHLFVFQRGNFATPTYRTFGVETKFV 280
Query: 349 TVPDIFLPEKYNCRTPISKTI 411
T+P IFLP+KYN R PI KT+
Sbjct: 281 TLPPIFLPKKYNARYPIKKTV 301
>gb|ACS28233.1| replicase [Alternanthera mosaic virus]
Length = 1541
Score = 166 bits (420), Expect = 3e-39
Identities = 79/141 (56%), Positives = 101/141 (71%), Gaps = 4/141 (2%)
Frame = +1
Query: 1 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK 180
+ +F S KLQTLYAT+VLPPEA++R+ S++P IY L + E F+Y PGGHAGASY H+
Sbjct: 161 IREIFTSSQKLQTLYATMVLPPEAMHRMHSIHPSIYELEFHERNFIYKPGGHAGASYCHE 220
Query: 181 YDQLEWLTVGHLTAAN----QPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYV 348
Y QL+WL VG + + +T+Q LETKGANHLF+FQRGN+ TP RTF +V
Sbjct: 221 YSQLQWLKVGKFEWCDKRYQKHYVTSQILETKGANHLFVFQRGNFATPTYRTFGVETKFV 280
Query: 349 TVPDIFLPEKYNCRTPISKTI 411
T+P IFLP+KYN R PI KT+
Sbjct: 281 TLPPIFLPKKYNARYPIKKTV 301
>ref|YP_459944.1| replicase [Alternanthera mosaic virus] gi|62082367|gb|AAX62019.1|
replicase [Alternanthera mosaic virus]
Length = 1541
Score = 165 bits (418), Expect = 5e-39
Identities = 78/141 (55%), Positives = 101/141 (71%), Gaps = 4/141 (2%)
Frame = +1
Query: 1 VTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHK 180
+ +F +S KL TLYAT+VLPPEA++R+ S++P IY L + E F+Y PGGHAGASY H+
Sbjct: 161 IREIFTNSQKLHTLYATMVLPPEAMHRMHSIHPSIYELEFHERNFIYKPGGHAGASYCHE 220
Query: 181 YDQLEWLTVGHLTAANQP----TITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYV 348
Y QL+WL VG ++ +T+Q LETKGANHLF+FQRGN+ TP RTF +V
Sbjct: 221 YSQLQWLKVGKFEWCDKKYQKHYVTSQILETKGANHLFVFQRGNFATPTYRTFGVETKFV 280
Query: 349 TVPDIFLPEKYNCRTPISKTI 411
T+P IFLP+KYN R PI KT+
Sbjct: 281 TLPPIFLPKKYNARYPIKKTV 301