BLASTX nr result

ID: Rehmannia26_contig00008910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00008910
         (667 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598569.1| hypothetical protein MTR_3g015660 [Medicago ...    57   4e-06
gb|ABD32456.2| Nucleic acid-binding, OB-fold [Medicago truncatula]     57   5e-06
ref|XP_003638595.1| hypothetical protein MTR_137s0043 [Medicago ...    56   9e-06

>ref|XP_003598569.1| hypothetical protein MTR_3g015660 [Medicago truncatula]
           gi|355487617|gb|AES68820.1| hypothetical protein
           MTR_3g015660 [Medicago truncatula]
          Length = 284

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 2/147 (1%)
 Frame = -3

Query: 581 TSLFGKIYYIYFPVHV-KFKA*IVIN*SFFLPLILLSTDVIGRIVSMHSTQTTEIAGKST 405
           TS F K++    P++V +FK     N      +  +STDVIG ++     + TE  G+ +
Sbjct: 104 TSTFTKVHSPAIPMNVFEFKP---FNGILSSTVEEVSTDVIGHVIERGDIRETEKDGRKS 160

Query: 404 RFIELTLEDLE*FRLSNFI*EITFNHKL*XXXXXXXXLFCSFHRNNRITCTLWEEYVDEI 225
           R I+LTLEDLE                                 NNR+ C+LW E+ D+I
Sbjct: 161 RVIDLTLEDLE---------------------------------NNRLHCSLWGEHADKI 187

Query: 224 LPYL-EEGRFEPLIVILQMCRAKVFRG 147
           + +        P I+ILQ C+ +++ G
Sbjct: 188 VTFFGNHDNDTPTILILQFCKTRMYLG 214


>gb|ABD32456.2| Nucleic acid-binding, OB-fold [Medicago truncatula]
          Length = 327

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 2/146 (1%)
 Frame = -3

Query: 578 SLFGKIYYIYFPVHV-KFKA*IVIN*SFFLPLILLSTDVIGRIVSMHSTQTTEIAGKSTR 402
           S F K++ +  P++V +FK     N      +  + TDVIG ++   + + TE  G+ +R
Sbjct: 106 STFTKVHSLAIPMNVFEFKP---FNEILSSTVEEVYTDVIGHVIERGNIRETEKDGRKSR 162

Query: 401 FIELTLEDLE*FRLSNFI*EITFNHKL*XXXXXXXXLFCSFHRNNRITCTLWEEYVDEIL 222
            I+LTLEDLE                                 NNR+ C+LW E+VD+I+
Sbjct: 163 VIDLTLEDLE---------------------------------NNRLHCSLWGEHVDKIV 189

Query: 221 PYL-EEGRFEPLIVILQMCRAKVFRG 147
            +        P I+ILQ C+ +++ G
Sbjct: 190 TFFGNHDNDTPTILILQFCKTRMYLG 215


>ref|XP_003638595.1| hypothetical protein MTR_137s0043 [Medicago truncatula]
           gi|355504530|gb|AES85733.1| hypothetical protein
           MTR_137s0043 [Medicago truncatula]
          Length = 372

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
 Frame = -3

Query: 479 LSTDVIGRIVSMHSTQTTEIAGKSTRFIELTLEDLE*FRLSNFI*EITFNHKL*XXXXXX 300
           +STDVIG ++     + TE  G+  R I+LTLEDLE                        
Sbjct: 117 VSTDVIGHVIERGDIRETEKDGRKNRVIDLTLEDLE------------------------ 152

Query: 299 XXLFCSFHRNNRITCTLWEEYVDEILPYL-EEGRFEPLIVILQMCRAKVFRGKL 141
                    NNR+ C+LW E+ D+I+ +        P I+ILQ C+ +++ G +
Sbjct: 153 ---------NNRLHCSLWGEHADKIVTFFGNHDNDTPTILILQFCKTRMYLGAM 197


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