BLASTX nr result

ID: Rehmannia26_contig00008883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00008883
         (663 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006386257.1| hypothetical protein POPTR_0002s04920g [Popu...    59   2e-06

>ref|XP_006386257.1| hypothetical protein POPTR_0002s04920g [Populus trichocarpa]
           gi|550344304|gb|ERP64054.1| hypothetical protein
           POPTR_0002s04920g [Populus trichocarpa]
          Length = 345

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 37/91 (40%), Positives = 52/91 (57%)
 Frame = +1

Query: 4   MEGPSNRKASVQRYLXXXXXXXXXXXXXXTGITSCASLDMYFNQQKDNQIPNEPLIRSNT 183
           +EG ++RKAS+QRYL                +TS AS+D+Y N +  +QI N+    ++ 
Sbjct: 250 LEGSTSRKASLQRYLEKKKDRLKNKRK--VAMTS-ASVDIYLNHRVGDQISNDHWNLNDA 306

Query: 184 CSPPQIRPSSTPNRCSSVVNDSLKDVSASTD 276
           CS PQ RP  TPNRC+S+ N   K+ S S D
Sbjct: 307 CSSPQPRPPQTPNRCNSIDN-LAKNGSLSAD 336


Top