BLASTX nr result
ID: Rehmannia26_contig00008809
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00008809
(936 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006482393.1| PREDICTED: 60S ribosomal export protein NMD3... 144 6e-32
ref|XP_004250232.1| PREDICTED: 60S ribosomal export protein NMD3... 144 6e-32
ref|XP_006352400.1| PREDICTED: 60S ribosomal export protein NMD3... 142 1e-31
ref|XP_006430673.1| hypothetical protein CICLE_v10011515mg [Citr... 141 3e-31
ref|XP_004288350.1| PREDICTED: 60S ribosomal export protein NMD3... 140 5e-31
ref|XP_006350665.1| PREDICTED: 60S ribosomal export protein NMD3... 139 1e-30
ref|XP_004241026.1| PREDICTED: 60S ribosomal export protein NMD3... 138 3e-30
gb|ABV28352.1| nonsense-mediated mRNA decary protein 3 [Taiwania... 136 1e-29
gb|EPS64130.1| hypothetical protein M569_10648, partial [Genlise... 136 1e-29
gb|EMJ15128.1| hypothetical protein PRUPE_ppa004435mg [Prunus pe... 135 2e-29
ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3... 135 2e-29
gb|EXB53574.1| hypothetical protein L484_009314 [Morus notabilis] 135 3e-29
ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3... 135 3e-29
ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3... 134 4e-29
emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera] 134 4e-29
ref|XP_004296646.1| PREDICTED: 60S ribosomal export protein NMD3... 134 5e-29
ref|XP_002306035.2| nonsense-mediated mRNA decay NMD3 family pro... 134 6e-29
ref|XP_002305882.2| hypothetical protein POPTR_0004s08410g [Popu... 134 6e-29
gb|EMJ15028.1| hypothetical protein PRUPE_ppa004506mg [Prunus pe... 134 6e-29
ref|XP_002533531.1| nonsense-mediated mRNA decay protein, putati... 134 6e-29
>ref|XP_006482393.1| PREDICTED: 60S ribosomal export protein NMD3-like, partial [Citrus
sinensis]
Length = 523
Score = 144 bits (362), Expect = 6e-32
Identities = 74/103 (71%), Positives = 86/103 (83%), Gaps = 1/103 (0%)
Frame = +3
Query: 3 SREVDVRGVKYVLADAQVARVSDFGKNDMIFTVRTHLGHILKAGDYALGYDLYGANINDI 182
S EV+V G KYVLADAQVARVSDFGKND IF++RTHLGH+L GDYALGYDLY AN ND+
Sbjct: 340 SSEVNVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYSANNNDM 399
Query: 183 ELDKYKGLVLPDVILIKKSY-EKKIQKWGKPCSRLC*SVTLKV 308
ELDKYKGLVLP+ ILIKKSY EK+++K GKP S S+ ++V
Sbjct: 400 ELDKYKGLVLPETILIKKSYEEKRLRKRGKPRSWKLKSLDMEV 442
>ref|XP_004250232.1| PREDICTED: 60S ribosomal export protein NMD3-like [Solanum
lycopersicum]
Length = 508
Score = 144 bits (362), Expect = 6e-32
Identities = 79/115 (68%), Positives = 90/115 (78%), Gaps = 1/115 (0%)
Frame = +3
Query: 3 SREVDVRGVKYVLADAQVARVSDFGKNDMIFTVRTHLGHILKAGDYALGYDLYGANINDI 182
S EV++ G KYVLAD QVARVSDFGKND IF+VRTHLGH+L AGDYALGYDLY AN ND
Sbjct: 327 SEEVNIGGSKYVLADIQVARVSDFGKNDTIFSVRTHLGHLLDAGDYALGYDLYRANSNDF 386
Query: 183 ELDKYKGLVLPDVILIKKSYEKKIQ-KWGKPCSRLC*SVTLKVVLIGDSAIGKSQ 344
EL+KYKGLVLP+VILIKKSYE+K Q K GKP S S+ ++ I +S GK Q
Sbjct: 387 ELEKYKGLVLPEVILIKKSYEEKRQKKRGKPRSWKLKSLNME---IDNSGKGKDQ 438
>ref|XP_006352400.1| PREDICTED: 60S ribosomal export protein NMD3-like [Solanum
tuberosum]
Length = 511
Score = 142 bits (359), Expect = 1e-31
Identities = 78/115 (67%), Positives = 90/115 (78%), Gaps = 1/115 (0%)
Frame = +3
Query: 3 SREVDVRGVKYVLADAQVARVSDFGKNDMIFTVRTHLGHILKAGDYALGYDLYGANINDI 182
S EV++ G KYVLAD QVARVSDFGKND IF+VRTHLGH+L AGDYALGYDLY AN ND
Sbjct: 327 SEEVNIGGSKYVLADIQVARVSDFGKNDTIFSVRTHLGHLLDAGDYALGYDLYRANSNDF 386
Query: 183 ELDKYKGLVLPDVILIKKSYEKKIQ-KWGKPCSRLC*SVTLKVVLIGDSAIGKSQ 344
EL+KYKGLVLP+VILIKKSYE+K Q K GKP S S+ ++ I +S G+ Q
Sbjct: 387 ELEKYKGLVLPEVILIKKSYEEKHQKKRGKPRSWKLKSLNME---IDNSGKGRDQ 438
>ref|XP_006430673.1| hypothetical protein CICLE_v10011515mg [Citrus clementina]
gi|557532730|gb|ESR43913.1| hypothetical protein
CICLE_v10011515mg [Citrus clementina]
Length = 511
Score = 141 bits (356), Expect = 3e-31
Identities = 73/103 (70%), Positives = 85/103 (82%), Gaps = 1/103 (0%)
Frame = +3
Query: 3 SREVDVRGVKYVLADAQVARVSDFGKNDMIFTVRTHLGHILKAGDYALGYDLYGANINDI 182
S EV+V G KYVLADAQVARVSDFGKND IF++RTHLGH+L GDYALGYDLY AN ND+
Sbjct: 327 SSEVNVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYSANNNDM 386
Query: 183 ELDKYKGLVLPDVILIKKSY-EKKIQKWGKPCSRLC*SVTLKV 308
ELDKYKGLVLP+ ILIKKSY EK+++K KP S S+ ++V
Sbjct: 387 ELDKYKGLVLPETILIKKSYEEKRLRKRSKPRSWKLKSLDMEV 429
>ref|XP_004288350.1| PREDICTED: 60S ribosomal export protein NMD3-like [Fragaria vesca
subsp. vesca]
Length = 515
Score = 140 bits (354), Expect = 5e-31
Identities = 69/91 (75%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
Frame = +3
Query: 3 SREVDVRGVKYVLADAQVARVSDFGKNDMIFTVRTHLGHILKAGDYALGYDLYGANINDI 182
S EV+V G +Y LADAQVARVSDFGKND IF ++THLGH+L GDYALGYDLYGAN ND
Sbjct: 327 SSEVNVGGTRYALADAQVARVSDFGKNDTIFNIKTHLGHLLNPGDYALGYDLYGANSNDE 386
Query: 183 ELDKYKGLVLPDVILIKKSY-EKKIQKWGKP 272
ELDKYKGLV+PDVILIKKSY EK+++K KP
Sbjct: 387 ELDKYKGLVIPDVILIKKSYEEKRLKKRSKP 417
>ref|XP_006350665.1| PREDICTED: 60S ribosomal export protein NMD3-like [Solanum
tuberosum]
Length = 511
Score = 139 bits (351), Expect = 1e-30
Identities = 71/103 (68%), Positives = 81/103 (78%), Gaps = 1/103 (0%)
Frame = +3
Query: 3 SREVDVRGVKYVLADAQVARVSDFGKNDMIFTVRTHLGHILKAGDYALGYDLYGANINDI 182
S EV++ G KY LADAQVAR+SDFGKND IF VRTHLGH+L GDYALGYDLY N ND
Sbjct: 327 STEVNIGGSKYALADAQVARISDFGKNDTIFNVRTHLGHLLNPGDYALGYDLYATNSNDS 386
Query: 183 ELDKYKGLVLPDVILIKKSYEKKIQ-KWGKPCSRLC*SVTLKV 308
ELDKYKG VLPDVIL+KKSYE+K Q K GKP S S+ +++
Sbjct: 387 ELDKYKGFVLPDVILVKKSYEEKWQKKRGKPRSWKLKSLNMEI 429
>ref|XP_004241026.1| PREDICTED: 60S ribosomal export protein NMD3-like isoform 1
[Solanum lycopersicum] gi|460390829|ref|XP_004241027.1|
PREDICTED: 60S ribosomal export protein NMD3-like
isoform 2 [Solanum lycopersicum]
Length = 511
Score = 138 bits (347), Expect = 3e-30
Identities = 71/103 (68%), Positives = 81/103 (78%), Gaps = 1/103 (0%)
Frame = +3
Query: 3 SREVDVRGVKYVLADAQVARVSDFGKNDMIFTVRTHLGHILKAGDYALGYDLYGANINDI 182
S EV++ G KY LADAQVAR+SDFGKND IF +RTHLGHIL GD ALGYDLY AN ND
Sbjct: 327 SSEVNIGGSKYALADAQVARISDFGKNDTIFNIRTHLGHILNPGDNALGYDLYAANSNDS 386
Query: 183 ELDKYKGLVLPDVILIKKSYEKKIQ-KWGKPCSRLC*SVTLKV 308
ELDKYKG VLPDVIL+KKSYE+K Q K GKP S S+ +++
Sbjct: 387 ELDKYKGFVLPDVILVKKSYEEKWQKKRGKPRSWKLKSLNMEI 429
>gb|ABV28352.1| nonsense-mediated mRNA decary protein 3 [Taiwania cryptomerioides]
Length = 515
Score = 136 bits (343), Expect = 1e-29
Identities = 66/88 (75%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
Frame = +3
Query: 12 VDVRGVKYVLADAQVARVSDFGKNDMIFTVRTHLGHILKAGDYALGYDLYGANINDIELD 191
+ V G+KY LADAQVARVSDFGKND IF V+THLGH+L GDYALG+DLYGAN ND+E+D
Sbjct: 333 ITVGGMKYSLADAQVARVSDFGKNDTIFNVKTHLGHLLNPGDYALGFDLYGANTNDLEMD 392
Query: 192 KYKGLVLPDVILIKKSYEKKIQ-KWGKP 272
KYKGL LPDV+L+KKSYE+K Q K GKP
Sbjct: 393 KYKGLNLPDVVLVKKSYEEKRQKKRGKP 420
>gb|EPS64130.1| hypothetical protein M569_10648, partial [Genlisea aurea]
Length = 508
Score = 136 bits (342), Expect = 1e-29
Identities = 68/103 (66%), Positives = 86/103 (83%), Gaps = 1/103 (0%)
Frame = +3
Query: 3 SREVDVRGVKYVLADAQVARVSDFGKNDMIFTVRTHLGHILKAGDYALGYDLYGANINDI 182
S EV V G+KYV+ADAQVARVSDFGKND++F +RTHLGH+L GDYALGYDL+G+N N+
Sbjct: 321 SSEVTVGGLKYVMADAQVARVSDFGKNDIMFNIRTHLGHLLNPGDYALGYDLHGSNNNEA 380
Query: 183 ELDKYKGLVLPDVILIKKSY-EKKIQKWGKPCSRLC*SVTLKV 308
+L+KYKGL LP+VILIKKSY EK+++K GKP S S+ ++V
Sbjct: 381 DLNKYKGLYLPEVILIKKSYEEKRLKKRGKPRSWKLKSLEMEV 423
>gb|EMJ15128.1| hypothetical protein PRUPE_ppa004435mg [Prunus persica]
Length = 510
Score = 135 bits (340), Expect = 2e-29
Identities = 65/86 (75%), Positives = 74/86 (86%)
Frame = +3
Query: 3 SREVDVRGVKYVLADAQVARVSDFGKNDMIFTVRTHLGHILKAGDYALGYDLYGANINDI 182
S EV+V G ++ LADAQVARVSDFGKND IF ++THLGH+L GDYALGYDLYGAN ND
Sbjct: 327 SPEVNVGGSRFALADAQVARVSDFGKNDTIFNIKTHLGHLLNPGDYALGYDLYGANSNDD 386
Query: 183 ELDKYKGLVLPDVILIKKSYEKKIQK 260
EL+KYKGLV+PD ILIKKSYE+K QK
Sbjct: 387 ELEKYKGLVIPDAILIKKSYEEKRQK 412
>ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
Length = 505
Score = 135 bits (340), Expect = 2e-29
Identities = 70/103 (67%), Positives = 84/103 (81%), Gaps = 1/103 (0%)
Frame = +3
Query: 3 SREVDVRGVKYVLADAQVARVSDFGKNDMIFTVRTHLGHILKAGDYALGYDLYGANINDI 182
S EV+V G KY+LA AQVARVSDFG+ND +F+++THLGHIL GDYALGYDLYGAN ND+
Sbjct: 327 STEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIKTHLGHILNPGDYALGYDLYGANSNDM 386
Query: 183 ELDKYKGLVLPDVILIKKSYEKKIQ-KWGKPCSRLC*SVTLKV 308
EL+KYKGL LP+ ILIKKSYE+K Q K GKP S S+++ V
Sbjct: 387 ELEKYKGLELPEAILIKKSYEEKRQRKHGKPRSWKLKSLSMDV 429
>gb|EXB53574.1| hypothetical protein L484_009314 [Morus notabilis]
Length = 508
Score = 135 bits (339), Expect = 3e-29
Identities = 65/86 (75%), Positives = 74/86 (86%)
Frame = +3
Query: 3 SREVDVRGVKYVLADAQVARVSDFGKNDMIFTVRTHLGHILKAGDYALGYDLYGANINDI 182
S +V+V G +Y LADAQVAR+SDFGKND IF +RTHLGHIL GDYALGYDLY AN NDI
Sbjct: 326 SPDVNVGGSRYALADAQVARLSDFGKNDTIFNIRTHLGHILNPGDYALGYDLYAANNNDI 385
Query: 183 ELDKYKGLVLPDVILIKKSYEKKIQK 260
EL+KYKGLVLPD ILIKK+YE+K Q+
Sbjct: 386 ELEKYKGLVLPDAILIKKNYEEKRQR 411
>ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
Length = 505
Score = 135 bits (339), Expect = 3e-29
Identities = 70/103 (67%), Positives = 84/103 (81%), Gaps = 1/103 (0%)
Frame = +3
Query: 3 SREVDVRGVKYVLADAQVARVSDFGKNDMIFTVRTHLGHILKAGDYALGYDLYGANINDI 182
S EV+V G KY+LA AQVARVSDFG+ND +F+++THLGHIL GDYALGYDLYGAN ND+
Sbjct: 327 STEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIKTHLGHILNPGDYALGYDLYGANSNDM 386
Query: 183 ELDKYKGLVLPDVILIKKSYEKKIQ-KWGKPCSRLC*SVTLKV 308
EL+KYKGL LP+ ILIKKSYE+K Q K GKP S S+++ V
Sbjct: 387 ELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLKSLSMDV 429
>ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3-like [Vitis vinifera]
Length = 510
Score = 134 bits (338), Expect = 4e-29
Identities = 69/103 (66%), Positives = 82/103 (79%), Gaps = 1/103 (0%)
Frame = +3
Query: 3 SREVDVRGVKYVLADAQVARVSDFGKNDMIFTVRTHLGHILKAGDYALGYDLYGANINDI 182
S EV+V G KY LADAQVARVSDFGKND IF +RTHLGH+L GD+ALGYD+Y AN ND+
Sbjct: 327 SSEVNVGGSKYALADAQVARVSDFGKNDTIFNIRTHLGHLLNPGDHALGYDVYAANSNDM 386
Query: 183 ELDKYKGLVLPDVILIKKSYEKKIQ-KWGKPCSRLC*SVTLKV 308
EL+KY+G VLP+ ILIKKSYE+K Q K GKP S S+ ++V
Sbjct: 387 ELEKYRGFVLPEAILIKKSYEEKRQRKRGKPRSWKLKSLNMEV 429
>emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]
Length = 594
Score = 134 bits (338), Expect = 4e-29
Identities = 69/103 (66%), Positives = 82/103 (79%), Gaps = 1/103 (0%)
Frame = +3
Query: 3 SREVDVRGVKYVLADAQVARVSDFGKNDMIFTVRTHLGHILKAGDYALGYDLYGANINDI 182
S EV+V G KY LADAQVARVSDFGKND IF +RTHLGH+L GD+ALGYD+Y AN ND+
Sbjct: 327 SSEVNVGGSKYALADAQVARVSDFGKNDTIFNIRTHLGHLLNPGDHALGYDVYAANSNDM 386
Query: 183 ELDKYKGLVLPDVILIKKSYEKKIQ-KWGKPCSRLC*SVTLKV 308
EL+KY+G VLP+ ILIKKSYE+K Q K GKP S S+ ++V
Sbjct: 387 ELEKYRGFVLPEAILIKKSYEEKRQRKRGKPRSWKLKSLNMEV 429
>ref|XP_004296646.1| PREDICTED: 60S ribosomal export protein NMD3-like [Fragaria vesca
subsp. vesca]
Length = 511
Score = 134 bits (337), Expect = 5e-29
Identities = 67/103 (65%), Positives = 81/103 (78%), Gaps = 1/103 (0%)
Frame = +3
Query: 3 SREVDVRGVKYVLADAQVARVSDFGKNDMIFTVRTHLGHILKAGDYALGYDLYGANINDI 182
S EV + G +Y LADAQVAR+SDFGKND IF ++THLGH+L GDYALGYDLYGAN ND
Sbjct: 328 SPEVTIGGSRYALADAQVARLSDFGKNDTIFNIKTHLGHLLSPGDYALGYDLYGANSNDD 387
Query: 183 ELDKYKGLVLPDVILIKKSYEKKIQ-KWGKPCSRLC*SVTLKV 308
ELDKYKGLV+P+ IL+KKSYE+ Q K GKP S S+ +++
Sbjct: 388 ELDKYKGLVIPEAILVKKSYEENHQKKRGKPRSWKLKSLNMEI 430
>ref|XP_002306035.2| nonsense-mediated mRNA decay NMD3 family protein [Populus
trichocarpa] gi|550340877|gb|EEE86546.2|
nonsense-mediated mRNA decay NMD3 family protein
[Populus trichocarpa]
Length = 511
Score = 134 bits (336), Expect = 6e-29
Identities = 67/103 (65%), Positives = 83/103 (80%), Gaps = 1/103 (0%)
Frame = +3
Query: 3 SREVDVRGVKYVLADAQVARVSDFGKNDMIFTVRTHLGHILKAGDYALGYDLYGANINDI 182
S EV++ G +Y LADA VAR+SDFGKND +F ++THLGHILK GDYALGYDL+GAN ND+
Sbjct: 328 SPEVNIGGSRYALADATVARMSDFGKNDTMFNIKTHLGHILKPGDYALGYDLHGANSNDM 387
Query: 183 ELDKYKGLVLPDVILIKKSYEKKIQ-KWGKPCSRLC*SVTLKV 308
ELDKYK LV+P+ IL+KKSYE+K Q K GKP S S+ ++V
Sbjct: 388 ELDKYKNLVIPEAILVKKSYEEKRQRKRGKPRSWKLKSLNMEV 430
>ref|XP_002305882.2| hypothetical protein POPTR_0004s08410g [Populus trichocarpa]
gi|550340599|gb|EEE86393.2| hypothetical protein
POPTR_0004s08410g [Populus trichocarpa]
Length = 493
Score = 134 bits (336), Expect = 6e-29
Identities = 67/103 (65%), Positives = 83/103 (80%), Gaps = 1/103 (0%)
Frame = +3
Query: 3 SREVDVRGVKYVLADAQVARVSDFGKNDMIFTVRTHLGHILKAGDYALGYDLYGANINDI 182
S EV++ G +Y LADA VAR+SDFGKND +F ++THLGHILK GDYALGYDL+GAN ND+
Sbjct: 310 SPEVNIGGSRYALADATVARMSDFGKNDTMFNIKTHLGHILKPGDYALGYDLHGANSNDM 369
Query: 183 ELDKYKGLVLPDVILIKKSYEKKIQ-KWGKPCSRLC*SVTLKV 308
ELDKYK LV+P+ IL+KKSYE+K Q K GKP S S+ ++V
Sbjct: 370 ELDKYKNLVIPEAILVKKSYEEKRQRKRGKPRSWKLKSLNMEV 412
>gb|EMJ15028.1| hypothetical protein PRUPE_ppa004506mg [Prunus persica]
Length = 506
Score = 134 bits (336), Expect = 6e-29
Identities = 65/86 (75%), Positives = 73/86 (84%)
Frame = +3
Query: 3 SREVDVRGVKYVLADAQVARVSDFGKNDMIFTVRTHLGHILKAGDYALGYDLYGANINDI 182
S EV+V G + LADAQVARVSDFGKND IF ++THLGH+L GDYALGYDLYGAN ND
Sbjct: 321 SPEVNVGGSRLALADAQVARVSDFGKNDTIFNIKTHLGHLLNPGDYALGYDLYGANSNDD 380
Query: 183 ELDKYKGLVLPDVILIKKSYEKKIQK 260
EL+KYKGLV+PD ILIKKSYE+K QK
Sbjct: 381 ELEKYKGLVIPDAILIKKSYEEKRQK 406
>ref|XP_002533531.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
gi|223526598|gb|EEF28848.1| nonsense-mediated mRNA decay
protein, putative [Ricinus communis]
Length = 511
Score = 134 bits (336), Expect = 6e-29
Identities = 67/91 (73%), Positives = 76/91 (83%), Gaps = 1/91 (1%)
Frame = +3
Query: 3 SREVDVRGVKYVLADAQVARVSDFGKNDMIFTVRTHLGHILKAGDYALGYDLYGANINDI 182
S EV++ KY +A+ QVAR+SDFGKND IF ++THLGHILK GD ALGYDLYGAN NDI
Sbjct: 328 SPEVNIGSSKYAMAEVQVARLSDFGKNDTIFFIKTHLGHILKPGDQALGYDLYGANSNDI 387
Query: 183 ELDKYKGLVLPDVILIKKSYEKKIQ-KWGKP 272
ELDKYKGLVLP+ ILIKKSYE+K Q K GKP
Sbjct: 388 ELDKYKGLVLPEAILIKKSYEEKRQRKRGKP 418