BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00007828
         (528 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, ...   180   2e-43
ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, I...   180   2e-43
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s...   164   9e-39
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi...   164   9e-39
ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ...   161   1e-37
ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [S...   157   1e-36
ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [S...   157   2e-36
ref|NP_001147399.1| LOC100281008 [Zea mays] gi|194699730|gb|ACF8...   157   2e-36
gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subun...   156   2e-36
ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, ...   155   4e-36
gb|ACG27451.1| DNA-directed RNA polymerases I, II, and III 17.1 ...   155   4e-36
ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, I...   155   7e-36
ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, I...   154   1e-35
gb|ABK26380.1| unknown [Picea sitchensis]                             154   1e-35
ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citr...   153   3e-35
ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group] g...   152   3e-35
gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indi...   152   3e-35
gb|EXB86762.1| DNA-directed RNA polymerases I, II, and III subun...   152   4e-35
ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III ...   152   4e-35
ref|XP_004152137.1| PREDICTED: DNA-directed RNA polymerases I, I...   150   2e-34

>ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Solanum tuberosum]
          Length = 145

 Score =  180 bits (456), Expect = 2e-43
 Identities = 95/137 (69%), Positives = 104/137 (75%), Gaps = 10/137 (7%)
 Frame = -2

Query: 383 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDXXXXXXXXXX----------MMVL 234
           MVETLFEDIF V   DPDGKKFDRV+RI ARSEQFD                    MMVL
Sbjct: 1   MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDINTEIYPMRVKDKFMMVL 60

Query: 233 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 54
           ASTLNLDGTPD+GY+  GN+KSLADKF+YVM GKLYRISEE   K VKAD++VSFGGLLM
Sbjct: 61  ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120

Query: 53  MLKGDPSIAARFELDQK 3
            L+GDPSIAA+FELDQK
Sbjct: 121 QLRGDPSIAAKFELDQK 137


>ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like isoform 1 [Solanum lycopersicum]
           gi|460377396|ref|XP_004234479.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3-like
           isoform 2 [Solanum lycopersicum]
          Length = 145

 Score =  180 bits (456), Expect = 2e-43
 Identities = 95/137 (69%), Positives = 104/137 (75%), Gaps = 10/137 (7%)
 Frame = -2

Query: 383 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDXXXXXXXXXX----------MMVL 234
           MVETLFEDIF V   DPDGKKFDRV+RI ARSEQFD                    MMVL
Sbjct: 1   MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDVNTEIYPMRVKDKFMMVL 60

Query: 233 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 54
           ASTLNLDGTPD+GY+  GN+KSLADKF+YVM GKLYRISEE   K VKAD++VSFGGLLM
Sbjct: 61  ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120

Query: 53  MLKGDPSIAARFELDQK 3
            L+GDPSIAA+FELDQK
Sbjct: 121 QLRGDPSIAAKFELDQK 137


>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
           sativa Japonica Group]
          Length = 396

 Score =  164 bits (416), Expect = 9e-39
 Identities = 89/138 (64%), Positives = 99/138 (71%), Gaps = 11/138 (7%)
 Frame = -2

Query: 383 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDXXXXXXXXXXM----------MVL 234
           MVE LFEDIF V  LDPDGKKFDRVSRI ARSEQFD          +          MVL
Sbjct: 251 MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVL 310

Query: 233 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQ-VKADMYVSFGGLL 57
           A TLNLDGTPD+G+YT   RK+LADKFDYVM GKLY+ISE++   Q  K ++Y SFGGLL
Sbjct: 311 APTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLL 370

Query: 56  MMLKGDPSIAARFELDQK 3
           MMLKGDPS AA FELDQ+
Sbjct: 371 MMLKGDPSSAASFELDQR 388


>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
           gi|125598367|gb|EAZ38147.1| hypothetical protein
           OsJ_22498 [Oryza sativa Japonica Group]
          Length = 191

 Score =  164 bits (416), Expect = 9e-39
 Identities = 89/138 (64%), Positives = 99/138 (71%), Gaps = 11/138 (7%)
 Frame = -2

Query: 383 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDXXXXXXXXXXM----------MVL 234
           MVE LFEDIF V  LDPDGKKFDRVSRI ARSEQFD          +          MVL
Sbjct: 46  MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVL 105

Query: 233 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQ-VKADMYVSFGGLL 57
           A TLNLDGTPD+G+YT   RK+LADKFDYVM GKLY+ISE++   Q  K ++Y SFGGLL
Sbjct: 106 APTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLL 165

Query: 56  MMLKGDPSIAARFELDQK 3
           MMLKGDPS AA FELDQ+
Sbjct: 166 MMLKGDPSSAASFELDQR 183


>ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like isoform X1 [Oryza brachyantha]
           gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like isoform X2
           [Oryza brachyantha] gi|573948245|ref|XP_006656429.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 8B-like isoform X3 [Oryza brachyantha]
           gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like isoform X4
           [Oryza brachyantha] gi|573948249|ref|XP_006656431.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 8B-like isoform X5 [Oryza brachyantha]
          Length = 146

 Score =  161 bits (407), Expect = 1e-37
 Identities = 88/138 (63%), Positives = 97/138 (70%), Gaps = 11/138 (7%)
 Frame = -2

Query: 383 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDXXXXXXXXXXM----------MVL 234
           MVE LFEDIF V  LDPDGKKFDRVSRI ARSEQFD          +          MVL
Sbjct: 1   MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRPGDKFTMVL 60

Query: 233 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQ-VKADMYVSFGGLL 57
           A TLNLDGTPD G+YT   RK+LADK+DYVM GKLY+ISE+    Q  K ++Y SFGGLL
Sbjct: 61  APTLNLDGTPDIGFYTQAGRKTLADKYDYVMHGKLYKISEDGSGGQATKVEIYASFGGLL 120

Query: 56  MMLKGDPSIAARFELDQK 3
           MMLKGDPS AA FELDQ+
Sbjct: 121 MMLKGDPSTAANFELDQR 138


>ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [Sorghum bicolor]
           gi|241919960|gb|EER93104.1| hypothetical protein
           SORBIDRAFT_01g001330 [Sorghum bicolor]
          Length = 145

 Score =  157 bits (397), Expect = 1e-36
 Identities = 81/137 (59%), Positives = 95/137 (69%), Gaps = 10/137 (7%)
 Frame = -2

Query: 383 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQF----------DXXXXXXXXXXMMVL 234
           M E LFED F V  LDPDGKKFD+VSR+ ARSEQ           D           MVL
Sbjct: 1   MSEHLFEDTFIVSRLDPDGKKFDKVSRVEARSEQLGMYMQLDVATDVYPLRAGEKFNMVL 60

Query: 233 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 54
           A TLNLDGTPD+GYYT   RK+LAD ++YVMQGKLY+ISE+T  +  K ++Y SFGGLLM
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSQNAKVEIYASFGGLLM 120

Query: 53  MLKGDPSIAARFELDQK 3
           +L+GDPS AA FELDQ+
Sbjct: 121 LLRGDPSTAASFELDQR 137


>ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [Sorghum bicolor]
           gi|241917379|gb|EER90523.1| hypothetical protein
           SORBIDRAFT_01g001420 [Sorghum bicolor]
          Length = 145

 Score =  157 bits (396), Expect = 2e-36
 Identities = 81/137 (59%), Positives = 95/137 (69%), Gaps = 10/137 (7%)
 Frame = -2

Query: 383 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQF----------DXXXXXXXXXXMMVL 234
           M E LFED F V+ LDPDGKKFDRVSR+ ARSEQ           D           MVL
Sbjct: 1   MSEHLFEDTFVVNRLDPDGKKFDRVSRVEARSEQLAMYMQLDVATDVYPMQPNEKFNMVL 60

Query: 233 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 54
           A TLNLDGTPD+GYYT   RK+LAD ++YVM GKLY+ISE+T  +  K ++Y SFGGLLM
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADNYEYVMHGKLYKISEDTSSQNAKVEIYASFGGLLM 120

Query: 53  MLKGDPSIAARFELDQK 3
           +L+GDPS AA FELDQ+
Sbjct: 121 LLRGDPSTAASFELDQR 137


>ref|NP_001147399.1| LOC100281008 [Zea mays] gi|194699730|gb|ACF83949.1| unknown [Zea
           mays] gi|195607894|gb|ACG25777.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195608506|gb|ACG26083.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195611040|gb|ACG27350.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195649823|gb|ACG44379.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195653495|gb|ACG46215.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|238014148|gb|ACR38109.1| unknown [Zea mays]
           gi|413932441|gb|AFW66992.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 1 [Zea mays]
           gi|413932442|gb|AFW66993.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 2 [Zea mays]
           gi|413932443|gb|AFW66994.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 3 [Zea mays]
           gi|413932444|gb|AFW66995.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 4 [Zea mays]
          Length = 146

 Score =  157 bits (396), Expect = 2e-36
 Identities = 83/138 (60%), Positives = 96/138 (69%), Gaps = 11/138 (7%)
 Frame = -2

Query: 383 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDXXXXXXXXXXM----------MVL 234
           M E LFED F V  LDPDGKKFDRVSR+ ARSEQ D          +          MV+
Sbjct: 1   MSEHLFEDTFVVTRLDPDGKKFDRVSRVEARSEQLDMYMQLDVATDVYPMHAGEKFNMVI 60

Query: 233 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQ-VKADMYVSFGGLL 57
           A TLNLDGTPD+GYYT   RK+LAD ++YVMQGKLY+ISE+T   Q  K +MY SFGGLL
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSSQNAKVEMYASFGGLL 120

Query: 56  MMLKGDPSIAARFELDQK 3
           M+L+GDPS AA FELDQ+
Sbjct: 121 MLLRGDPSTAASFELDQR 138


>gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subunit rpabc3
           [Aegilops tauschii]
          Length = 220

 Score =  156 bits (395), Expect = 2e-36
 Identities = 84/140 (60%), Positives = 94/140 (67%), Gaps = 13/140 (9%)
 Frame = -2

Query: 383 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQF----------DXXXXXXXXXXMMVL 234
           M E LFEDIF V  +DPDGKKFDRV+RI ARSEQ           D           MVL
Sbjct: 1   MAEHLFEDIFHVTRIDPDGKKFDRVNRIEARSEQLEMYMQLDIATDVYPMHMGDKFTMVL 60

Query: 233 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQ---VKADMYVSFGG 63
           A TLNLDGTPD+GYYT   RK+LADK+DYVM GKLY+ISE+   K     K ++Y SFGG
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDNSSKDKGPTKVEIYASFGG 120

Query: 62  LLMMLKGDPSIAARFELDQK 3
           LLM+LKGDPS AA  ELDQK
Sbjct: 121 LLMLLKGDPSSAANLELDQK 140


>ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Oryza brachyantha]
          Length = 147

 Score =  155 bits (393), Expect = 4e-36
 Identities = 84/139 (60%), Positives = 95/139 (68%), Gaps = 12/139 (8%)
 Frame = -2

Query: 383 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQF----------DXXXXXXXXXXMMVL 234
           M E LFEDIF V  LDPDGKKFDRVSRI AR+EQ           D           MVL
Sbjct: 1   MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARNEQLNVYMQLDVATDVYPMHPGDKFTMVL 60

Query: 233 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISE--ETREKQVKADMYVSFGGL 60
             TLNLDGTPD+G++T   RK+LADK++YVM GKLY+ISE  ET  +  K +MY SFGGL
Sbjct: 61  VPTLNLDGTPDTGFFTQAGRKTLADKYEYVMHGKLYKISEDKETSGQNAKVEMYASFGGL 120

Query: 59  LMMLKGDPSIAARFELDQK 3
           LMMLKGDPS AA FELDQ+
Sbjct: 121 LMMLKGDPSSAANFELDQR 139


>gb|ACG27451.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide
           [Zea mays]
          Length = 146

 Score =  155 bits (393), Expect = 4e-36
 Identities = 82/138 (59%), Positives = 96/138 (69%), Gaps = 11/138 (7%)
 Frame = -2

Query: 383 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDXXXXXXXXXXM----------MVL 234
           M + LFED F V  LDPDGKKFDRVSR+ ARSEQ D          +          MV+
Sbjct: 1   MSDHLFEDTFVVTRLDPDGKKFDRVSRVEARSEQLDMYMQLDVATDVYPMHAGEKFNMVI 60

Query: 233 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQ-VKADMYVSFGGLL 57
           A TLNLDGTPD+GYYT   RK+LAD ++YVMQGKLY+ISE+T   Q  K +MY SFGGLL
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSSQNAKVEMYASFGGLL 120

Query: 56  MMLKGDPSIAARFELDQK 3
           M+L+GDPS AA FELDQ+
Sbjct: 121 MLLRGDPSTAASFELDQR 138


>ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like [Brachypodium distachyon]
          Length = 144

 Score =  155 bits (391), Expect = 7e-36
 Identities = 83/136 (61%), Positives = 95/136 (69%), Gaps = 9/136 (6%)
 Frame = -2

Query: 383 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQF--------DXXXXXXXXXXMMVLAS 228
           M E LFEDIF V  +DPDGKKFDRV+RI ARSEQ         D           MVLA 
Sbjct: 1   MAEHLFEDIFVVSRIDPDGKKFDRVNRIEARSEQMYMQLDVATDVYPMHAGDKFTMVLAP 60

Query: 227 TLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQ-VKADMYVSFGGLLMM 51
           TLNLDGTPD+GYYT   RK+LADK+DYVM GKLY+ISE++   Q  K ++Y SFGGLLM+
Sbjct: 61  TLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDSSGGQAAKVEIYASFGGLLML 120

Query: 50  LKGDPSIAARFELDQK 3
           LKGDPS AA  ELDQ+
Sbjct: 121 LKGDPSSAANLELDQR 136


>ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like [Brachypodium distachyon]
          Length = 146

 Score =  154 bits (389), Expect = 1e-35
 Identities = 83/138 (60%), Positives = 96/138 (69%), Gaps = 11/138 (7%)
 Frame = -2

Query: 383 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDXXXXXXXXXXM----------MVL 234
           M E LFEDIF V+ +DPDGKKFDRV+RI ARSEQF           +          MVL
Sbjct: 1   MAEHLFEDIFVVNRIDPDGKKFDRVNRIEARSEQFHMYMQLDVATYVYPMHAGDKFTMVL 60

Query: 233 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQ-VKADMYVSFGGLL 57
           A TLNLDGTPD+GYYT   RK+LADK+DYVM GKLY+ISE++   Q  K + Y SFGGLL
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDSSGGQAAKVETYASFGGLL 120

Query: 56  MMLKGDPSIAARFELDQK 3
           M+LKGDPS AA  ELDQ+
Sbjct: 121 MLLKGDPSSAANLELDQR 138


>gb|ABK26380.1| unknown [Picea sitchensis]
          Length = 145

 Score =  154 bits (389), Expect = 1e-35
 Identities = 81/137 (59%), Positives = 94/137 (68%), Gaps = 10/137 (7%)
 Frame = -2

Query: 383 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDXXXXXXXXXXM----------MVL 234
           MVE LFEDIF V  +DPDGKKFD+VSRI ARSEQFD          +          + L
Sbjct: 1   MVELLFEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVAL 60

Query: 233 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 54
           A TLNLDGTPD+GY+  G RKSLADK++YVM GKLY +SEE     VK ++  SFGGLLM
Sbjct: 61  APTLNLDGTPDNGYFIQGGRKSLADKYEYVMYGKLYNLSEEGSGANVKVEINASFGGLLM 120

Query: 53  MLKGDPSIAARFELDQK 3
           +LKGDPS A  FELDQ+
Sbjct: 121 LLKGDPSNAGNFELDQR 137


>ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citrus clementina]
           gi|568850174|ref|XP_006478800.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like [Citrus
           sinensis] gi|557545143|gb|ESR56121.1| hypothetical
           protein CICLE_v10022723mg [Citrus clementina]
          Length = 146

 Score =  153 bits (386), Expect = 3e-35
 Identities = 76/133 (57%), Positives = 95/133 (71%), Gaps = 10/133 (7%)
 Frame = -2

Query: 371 LFEDIFRVDTLDPDGKKFDRVSRISARSEQFDXXXXXXXXXXM----------MVLASTL 222
           LFEDIF V+ +DPDGKKFD+VSRI A S+  D          +          M LA TL
Sbjct: 6   LFEDIFVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMALAHTL 65

Query: 221 NLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLMMLKG 42
           NLDGTPD+GYYTPG RK+LADK++Y+M GKL++I +E   K +KA++YVS+GGLLMMLKG
Sbjct: 66  NLDGTPDTGYYTPGARKTLADKYEYIMHGKLFKIGDEGSGKSLKAEIYVSYGGLLMMLKG 125

Query: 41  DPSIAARFELDQK 3
           DPS  + FELDQ+
Sbjct: 126 DPSYVSHFELDQR 138


>ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group]
           gi|29244685|gb|AAO73277.1| putative RNA polymerase
           [Oryza sativa Japonica Group] gi|41469638|gb|AAS07361.1|
           putative RNA polymerase [Oryza sativa Japonica Group]
           gi|108712076|gb|ABF99871.1| RNA polymerase Rpb8 family
           protein, expressed [Oryza sativa Japonica Group]
           gi|108712077|gb|ABF99872.1| RNA polymerase Rpb8 family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113550351|dbj|BAF13794.1| Os03g0845700 [Oryza sativa
           Japonica Group] gi|125588624|gb|EAZ29288.1| hypothetical
           protein OsJ_13351 [Oryza sativa Japonica Group]
           gi|215692970|dbj|BAG88390.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 148

 Score =  152 bits (385), Expect = 3e-35
 Identities = 82/140 (58%), Positives = 96/140 (68%), Gaps = 13/140 (9%)
 Frame = -2

Query: 383 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDXXXXXXXXXXM----------MVL 234
           M E LFEDIF V  LDPDGKKFDRVSRI ARS+QFD          +          MVL
Sbjct: 1   MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 60

Query: 233 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEE---TREKQVKADMYVSFGG 63
             TLNLDGTPDS ++T   RK+LADK++YVM GKLY+ISE+   + +   K +MY SFGG
Sbjct: 61  VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFGG 120

Query: 62  LLMMLKGDPSIAARFELDQK 3
           LL+MLKGDPS AA FELDQ+
Sbjct: 121 LLVMLKGDPSSAANFELDQR 140


>gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indica Group]
          Length = 215

 Score =  152 bits (385), Expect = 3e-35
 Identities = 82/140 (58%), Positives = 96/140 (68%), Gaps = 13/140 (9%)
 Frame = -2

Query: 383 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDXXXXXXXXXXM----------MVL 234
           M E LFEDIF V  LDPDGKKFDRVSRI ARS+QFD          +          MVL
Sbjct: 68  MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 127

Query: 233 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEE---TREKQVKADMYVSFGG 63
             TLNLDGTPDS ++T   RK+LADK++YVM GKLY+ISE+   + +   K +MY SFGG
Sbjct: 128 VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFGG 187

Query: 62  LLMMLKGDPSIAARFELDQK 3
           LL+MLKGDPS AA FELDQ+
Sbjct: 188 LLVMLKGDPSSAANFELDQR 207


>gb|EXB86762.1| DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Morus
           notabilis]
          Length = 187

 Score =  152 bits (384), Expect = 4e-35
 Identities = 79/137 (57%), Positives = 99/137 (72%), Gaps = 10/137 (7%)
 Frame = -2

Query: 383 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDXXXXXXXXXXM----------MVL 234
           M E LFEDIF++D L+PDGKKFD+V+RI A+SE+FD          +          M L
Sbjct: 1   MAEFLFEDIFKIDRLNPDGKKFDKVTRIEAKSEKFDMFMHLDVGTDVYPMNEGEKFSMAL 60

Query: 233 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 54
           +STLN DGTPD+GYYTPGNRK+LAD ++YVMQGKLYRI+E +     KA++  SFGGLLM
Sbjct: 61  SSTLNEDGTPDTGYYTPGNRKTLADNYEYVMQGKLYRIAEGSGH-HGKAEIDASFGGLLM 119

Query: 53  MLKGDPSIAARFELDQK 3
           MLKGDPS   ++ELDQ+
Sbjct: 120 MLKGDPSYFKKYELDQR 136


>ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide,
           putative [Ricinus communis] gi|223530164|gb|EEF32075.1|
           DNA-directed RNA polymerases I, II, and III 17.1 kDa
           polypeptide, putative [Ricinus communis]
          Length = 146

 Score =  152 bits (384), Expect = 4e-35
 Identities = 79/133 (59%), Positives = 94/133 (70%), Gaps = 10/133 (7%)
 Frame = -2

Query: 371 LFEDIFRVDTLDPDGKKFDRVSRISARSEQFDXXXXXXXXXXM----------MVLASTL 222
           LFEDIF VD LDPDGKKFD+VSRI A S+  D          +          M LA TL
Sbjct: 6   LFEDIFVVDKLDPDGKKFDKVSRIEAHSQNCDMFMHLDVNTEIYPMAVGDKFTMALAHTL 65

Query: 221 NLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLMMLKG 42
           NLDGTPD+GYYT G RK+LADK++Y+M GKLY+ISEE   K VKA+M VS+GGLLM+L+G
Sbjct: 66  NLDGTPDTGYYTQGARKTLADKYEYIMNGKLYKISEEGSGKAVKAEMLVSYGGLLMLLRG 125

Query: 41  DPSIAARFELDQK 3
           DPS  + FELDQ+
Sbjct: 126 DPSHVSHFELDQR 138


>ref|XP_004152137.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like [Cucumis sativus]
           gi|449484745|ref|XP_004156968.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3-like
           [Cucumis sativus]
          Length = 144

 Score =  150 bits (379), Expect = 2e-34
 Identities = 78/137 (56%), Positives = 100/137 (72%), Gaps = 10/137 (7%)
 Frame = -2

Query: 383 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDXXXXXXXXXXM----------MVL 234
           MVE LF+DIF+++ L+PDGKKFD+V+RI A+SE+FD          +          M L
Sbjct: 1   MVELLFDDIFKIERLNPDGKKFDKVTRIEAKSEKFDMFMHLDINSEIYPLKEGEKFSMAL 60

Query: 233 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 54
           A TLNLDGTPD+GY+  GNRKSLAD+++YVMQGKL+RISE +     KA++  SFGGLLM
Sbjct: 61  APTLNLDGTPDTGYFLQGNRKSLADRYEYVMQGKLFRISESSGHGG-KAEIDASFGGLLM 119

Query: 53  MLKGDPSIAARFELDQK 3
           MLKGDPS  ++FELDQ+
Sbjct: 120 MLKGDPSHCSKFELDQR 136