BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00007719
         (751 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212...   304   2e-80
gb|AAO73521.1| gag-pol polyprotein [Glycine max]                      300   3e-79
gb|AAO73523.1| gag-pol polyprotein [Glycine max]                      300   3e-79
gb|AAO73527.1| gag-pol polyprotein [Glycine max]                      300   3e-79
gb|AAO73529.1| gag-pol polyprotein [Glycine max]                      298   1e-78
gb|AAC64917.1| gag-pol polyprotein [Glycine max]                      295   8e-78
gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-ty...   295   8e-78
gb|AAO73525.1| gag-pol polyprotein [Glycine max]                      294   2e-77
gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymera...   292   9e-77
emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]   291   2e-76
emb|CAN63777.1| hypothetical protein VITISV_043745 [Vitis vinifera]   286   5e-75
gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]                284   2e-74
gb|AAN40030.1| putative gag-pol polyprotein [Zea mays]                284   3e-74
gb|AAN40035.1| putative gag-pol polyprotein [Zea mays]                283   6e-74
gb|AAD20307.1| copia-type pol polyprotein [Zea mays]                  281   1e-73
gb|ABA98369.1| retrotransposon protein, putative, Ty1-copia subc...   281   1e-73
gb|AAL76004.1|AF466646_12 putative gag-pol polyprotein [Zea mays]     281   1e-73
gb|AAL75488.1|AF466202_14 putative pol protein [Zea mays]             281   1e-73
gb|ABF67921.1| Ji1 putative pol protein [Zea mays]                    281   1e-73
gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays]         281   2e-73

>ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  304 bits (778), Expect = 2e-80
 Identities = 149/224 (66%), Positives = 179/224 (79%)
 Frame = -3

Query: 686  LQPDVRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQA 507
            L  + R+   HP +L++G+  +GVKTRS     +    F+SQIEP+    A  D  WI A
Sbjct: 1598 LPKEWRYALSHPKDLILGNPEQGVKTRSSLNLFSNLA-FVSQIEPRSFKDAECDEFWILA 1656

Query: 506  MQEELNQFERNKVWELVQRPIHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGI 327
            MQEELNQFERNKVW+LV RP + ++IGTKWVFRNKM+E G+++RNKARLVA+GYCQEEGI
Sbjct: 1657 MQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGI 1716

Query: 326  DFDETFAPVARLEAIRMFLAYAAHKNFIVYQMDVKSAFLNGLLEEEVYVEQPPGFEQKTL 147
            D++ETFAPVARLEAIRM LA+A++KNFI+YQMDVKSAFLNG + EEVYVEQPPGFE   L
Sbjct: 1717 DYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDL 1776

Query: 146  GDKVYKLKKALYGLKQAPRAWYDTLSQFLTENGFTKGKVDRTLF 15
             + VYKL+KALYGLKQAPRAWYD LS+FL EN F  GK+D TLF
Sbjct: 1777 PNHVYKLEKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLF 1820


>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
          Length = 1574

 Score =  300 bits (768), Expect = 3e-79
 Identities = 153/250 (61%), Positives = 185/250 (74%), Gaps = 4/250 (1%)
 Frame = -3

Query: 740  ERADHSNTAASRLNPANLLQPD----VRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTC 573
            E A++S++A      +N+ QPD     R  + HP EL+IGD   GV TRSR  +    +C
Sbjct: 1003 ENAENSDSATDE---SNINQPDKRSSTRIQKMHPKELIIGDPNRGVTTRSREVEIVSNSC 1059

Query: 572  FISQIEPKDVSQALDDTHWIQAMQEELNQFERNKVWELVQRPIHQNVIGTKWVFRNKMNE 393
            F+S+IEPK+V +AL D  WI AMQEEL QF+RN+VWELV RP   NVIGTKW+F+NK NE
Sbjct: 1060 FVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNE 1119

Query: 392  EGSVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMFLAYAAHKNFIVYQMDVKSAF 213
            EG + RNKARLVA+GY Q EG+DFDETFAPVARLE+IR+ L  A    F +YQMDVKSAF
Sbjct: 1120 EGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAF 1179

Query: 212  LNGLLEEEVYVEQPPGFEQKTLGDKVYKLKKALYGLKQAPRAWYDTLSQFLTENGFTKGK 33
            LNG L EEVYVEQP GF   T  D VY+LKKALYGLKQAPRAWY+ L++FLT+ G+ KG 
Sbjct: 1180 LNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGG 1239

Query: 32   VDRTLFRIQD 3
            +D+TLF  QD
Sbjct: 1240 IDKTLFVKQD 1249


>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  300 bits (768), Expect = 3e-79
 Identities = 153/250 (61%), Positives = 185/250 (74%), Gaps = 4/250 (1%)
 Frame = -3

Query: 740  ERADHSNTAASRLNPANLLQPD----VRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTC 573
            E A++S++A      +N+ QPD     R  + HP EL+IGD   GV TRSR  +    +C
Sbjct: 1005 ENAENSDSATDE---SNINQPDKRSSTRIQKMHPKELIIGDPNRGVTTRSREVEIVSNSC 1061

Query: 572  FISQIEPKDVSQALDDTHWIQAMQEELNQFERNKVWELVQRPIHQNVIGTKWVFRNKMNE 393
            F+S+IEPK+V +AL D  WI AMQEEL QF+RN+VWELV RP   NVIGTKW+F+NK NE
Sbjct: 1062 FVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNE 1121

Query: 392  EGSVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMFLAYAAHKNFIVYQMDVKSAF 213
            EG + RNKARLVA+GY Q EG+DFDETFAPVARLE+IR+ L  A    F +YQMDVKSAF
Sbjct: 1122 EGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAF 1181

Query: 212  LNGLLEEEVYVEQPPGFEQKTLGDKVYKLKKALYGLKQAPRAWYDTLSQFLTENGFTKGK 33
            LNG L EEVYVEQP GF   T  D VY+LKKALYGLKQAPRAWY+ L++FLT+ G+ KG 
Sbjct: 1182 LNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGG 1241

Query: 32   VDRTLFRIQD 3
            +D+TLF  QD
Sbjct: 1242 IDKTLFVKQD 1251


>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  300 bits (768), Expect = 3e-79
 Identities = 153/250 (61%), Positives = 185/250 (74%), Gaps = 4/250 (1%)
 Frame = -3

Query: 740  ERADHSNTAASRLNPANLLQPD----VRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTC 573
            E A++S++A      +N+ QPD     R  + HP EL+IGD   GV TRSR  +    +C
Sbjct: 1005 ENAENSDSATDE---SNINQPDKRSSTRIQKMHPKELIIGDPNRGVTTRSREVEIVSNSC 1061

Query: 572  FISQIEPKDVSQALDDTHWIQAMQEELNQFERNKVWELVQRPIHQNVIGTKWVFRNKMNE 393
            F+S+IEPK+V +AL D  WI AMQEEL QF+RN+VWELV RP   NVIGTKW+F+NK NE
Sbjct: 1062 FVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNE 1121

Query: 392  EGSVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMFLAYAAHKNFIVYQMDVKSAF 213
            EG + RNKARLVA+GY Q EG+DFDETFAPVARLE+IR+ L  A    F +YQMDVKSAF
Sbjct: 1122 EGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAF 1181

Query: 212  LNGLLEEEVYVEQPPGFEQKTLGDKVYKLKKALYGLKQAPRAWYDTLSQFLTENGFTKGK 33
            LNG L EEVYVEQP GF   T  D VY+LKKALYGLKQAPRAWY+ L++FLT+ G+ KG 
Sbjct: 1182 LNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGG 1241

Query: 32   VDRTLFRIQD 3
            +D+TLF  QD
Sbjct: 1242 IDKTLFVKQD 1251


>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
          Length = 1577

 Score =  298 bits (764), Expect = 1e-78
 Identities = 150/248 (60%), Positives = 183/248 (73%), Gaps = 4/248 (1%)
 Frame = -3

Query: 734  ADHSNTAASRLNPANLLQPD----VRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFI 567
            A+++  + S  +  N+ QPD    +R  + HP EL+IGD   GV TRSR  +    +CF+
Sbjct: 1005 AENAENSDSATDEPNINQPDKRPSIRIQKMHPKELIIGDPNRGVTTRSREIEIVSNSCFV 1064

Query: 566  SQIEPKDVSQALDDTHWIQAMQEELNQFERNKVWELVQRPIHQNVIGTKWVFRNKMNEEG 387
            S+IEPK+V +AL D  WI AMQEEL QF+RN+VWELV RP   NVIGTKW+F+NK NEEG
Sbjct: 1065 SKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEG 1124

Query: 386  SVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMFLAYAAHKNFIVYQMDVKSAFLN 207
             + RNKARLVA+GY Q EG+DFDETFAPVARLE+IR+ L  A    F +YQMDVKSAFLN
Sbjct: 1125 VITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLN 1184

Query: 206  GLLEEEVYVEQPPGFEQKTLGDKVYKLKKALYGLKQAPRAWYDTLSQFLTENGFTKGKVD 27
            G L EE YVEQP GF   T  D VY+LKKALYGLKQAPRAWY+ L++FLT+ G+ KG +D
Sbjct: 1185 GYLNEEAYVEQPKGFVDPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGID 1244

Query: 26   RTLFRIQD 3
            +TLF  QD
Sbjct: 1245 KTLFVKQD 1252


>gb|AAC64917.1| gag-pol polyprotein [Glycine max]
          Length = 1550

 Score =  295 bits (756), Expect = 8e-78
 Identities = 149/248 (60%), Positives = 182/248 (73%), Gaps = 4/248 (1%)
 Frame = -3

Query: 734  ADHSNTAASRLNPANLLQPD----VRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFI 567
            A+++  + S  +  N+ QPD    +R  + HP EL+IGD   GV TRSR  +    +CF+
Sbjct: 978  AENAENSDSATDEPNINQPDKRPSIRIQKMHPKELIIGDPNRGVTTRSREIEIISNSCFV 1037

Query: 566  SQIEPKDVSQALDDTHWIQAMQEELNQFERNKVWELVQRPIHQNVIGTKWVFRNKMNEEG 387
            S+IEPK+V +AL D  WI AMQEEL QF+RN+VWELV RP   NVIGTKW+F+NK NEEG
Sbjct: 1038 SKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEG 1097

Query: 386  SVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMFLAYAAHKNFIVYQMDVKSAFLN 207
             + RNKARLVA+GY Q EG+DFDETFAP ARLE+IR+ L  A    F +YQMDVKSAFLN
Sbjct: 1098 VITRNKARLVAQGYTQIEGVDFDETFAPGARLESIRLLLGVACILKFKLYQMDVKSAFLN 1157

Query: 206  GLLEEEVYVEQPPGFEQKTLGDKVYKLKKALYGLKQAPRAWYDTLSQFLTENGFTKGKVD 27
            G L EE YVEQP GF   T  D VY+LKKALYGLKQAPRAWY+ L++FLT+ G+ KG +D
Sbjct: 1158 GYLNEEAYVEQPKGFVDPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGID 1217

Query: 26   RTLFRIQD 3
            +TLF  QD
Sbjct: 1218 KTLFVKQD 1225


>gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
            aspartic, catalytic [Medicago truncatula]
          Length = 1715

 Score =  295 bits (756), Expect = 8e-78
 Identities = 145/230 (63%), Positives = 174/230 (75%)
 Frame = -3

Query: 701  NPANLLQPDVRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDT 522
            N   ++QP  +    HP EL+IG      +TRS  +QE      +S IEPK V +AL D 
Sbjct: 1159 NTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDD 1218

Query: 521  HWIQAMQEELNQFERNKVWELVQRPIHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYC 342
             WI AMQEELNQF+RN VW+LV +P  +N+IGTKWVFRNK+NE+G V RNKARLVA+GY 
Sbjct: 1219 GWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYS 1278

Query: 341  QEEGIDFDETFAPVARLEAIRMFLAYAAHKNFIVYQMDVKSAFLNGLLEEEVYVEQPPGF 162
            Q+EGID+ ETFAPVARLEAIR+ L+YA +   I+YQMDVKSAFLNG++EEEVYV+QPPGF
Sbjct: 1279 QQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVIEEEVYVKQPPGF 1338

Query: 161  EQKTLGDKVYKLKKALYGLKQAPRAWYDTLSQFLTENGFTKGKVDRTLFR 12
            E     D VYKLKK+LYGLKQAPRAWYD LS FL +N F +G+VD TLFR
Sbjct: 1339 EDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFR 1388


>gb|AAO73525.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  294 bits (753), Expect = 2e-77
 Identities = 149/248 (60%), Positives = 182/248 (73%), Gaps = 4/248 (1%)
 Frame = -3

Query: 734  ADHSNTAASRLNPANLLQPD----VRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFI 567
            A+++  + S  +  N+ QPD    +R  +  P EL+IGD   GV TRSR  +    +CF+
Sbjct: 1004 AENAEKSDSTTDEPNINQPDKSPFIRIQKMQPKELIIGDPNRGVTTRSREIEIVSNSCFV 1063

Query: 566  SQIEPKDVSQALDDTHWIQAMQEELNQFERNKVWELVQRPIHQNVIGTKWVFRNKMNEEG 387
            S+IEPK+V +AL D  WI AMQEEL QF+RN+VWELV RP   NVIGTKW+F+NK NEEG
Sbjct: 1064 SKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEG 1123

Query: 386  SVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMFLAYAAHKNFIVYQMDVKSAFLN 207
             + RNKARLVA+GY Q EG+DFDETFAPVARLE+IR+ L  A    F +YQMDVKSAFLN
Sbjct: 1124 VITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLN 1183

Query: 206  GLLEEEVYVEQPPGFEQKTLGDKVYKLKKALYGLKQAPRAWYDTLSQFLTENGFTKGKVD 27
            G L EE YVEQP GF   T  D VY+LKKALYGLKQAPRAWY+ L++FLT+ G+ KG +D
Sbjct: 1184 GYLNEEAYVEQPKGFVDPTHLDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGID 1243

Query: 26   RTLFRIQD 3
            +TLF  QD
Sbjct: 1244 KTLFVKQD 1251


>gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
            [Medicago truncatula]
          Length = 1654

 Score =  292 bits (747), Expect = 9e-77
 Identities = 143/230 (62%), Positives = 172/230 (74%)
 Frame = -3

Query: 701  NPANLLQPDVRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDT 522
            N   ++QP  +    HP EL+IG      +TRS  +QE      +S IEPK V +AL D 
Sbjct: 1098 NTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEETLIGLLSIIEPKTVEEALSDD 1157

Query: 521  HWIQAMQEELNQFERNKVWELVQRPIHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYC 342
             WI +MQEELNQF+RN VW+LV +P  +N+IGTKWVFRNK NE+G V RNKARLVA+GY 
Sbjct: 1158 GWILSMQEELNQFQRNDVWDLVPKPFQKNIIGTKWVFRNKQNEQGEVTRNKARLVAQGYS 1217

Query: 341  QEEGIDFDETFAPVARLEAIRMFLAYAAHKNFIVYQMDVKSAFLNGLLEEEVYVEQPPGF 162
            Q+EGID+ ETFAPVARLEAIR+ L+YA +   I+YQMDVKSA LNG++EEEVYV+QPPGF
Sbjct: 1218 QQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSALLNGVIEEEVYVKQPPGF 1277

Query: 161  EQKTLGDKVYKLKKALYGLKQAPRAWYDTLSQFLTENGFTKGKVDRTLFR 12
            E     D VYKLKK+LYGLKQAPRAWYD LS FL +N F +G+VD TLFR
Sbjct: 1278 EDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFR 1327


>emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]
          Length = 1885

 Score =  291 bits (745), Expect = 2e-76
 Identities = 142/225 (63%), Positives = 178/225 (79%)
 Frame = -3

Query: 689  LLQPDVRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQ 510
            LL    +++ +HP + +IG+   GV+TRS  +       FISQIEPK++  A+ D +W+ 
Sbjct: 918  LLLNKCKFVINHPQDQIIGNPLSGVRTRSSLRNICNNLAFISQIEPKNIKDAIVDENWMI 977

Query: 509  AMQEELNQFERNKVWELVQRPIHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEG 330
            AMQ+ELNQFER++VWELV RP +Q+VIGTKWVFRNKM+E G +VRNKARLVA+GY QEEG
Sbjct: 978  AMQKELNQFERSEVWELVPRPSNQSVIGTKWVFRNKMDENGIIVRNKARLVAQGYNQEEG 1037

Query: 329  IDFDETFAPVARLEAIRMFLAYAAHKNFIVYQMDVKSAFLNGLLEEEVYVEQPPGFEQKT 150
            ID++ETFAPVARLEAIRM LA+A  K+FI+YQMDVKSAFLNG + EE+YVEQPPGF+   
Sbjct: 1038 IDYEETFAPVARLEAIRMLLAFACFKDFILYQMDVKSAFLNGFINEEIYVEQPPGFQSFN 1097

Query: 149  LGDKVYKLKKALYGLKQAPRAWYDTLSQFLTENGFTKGKVDRTLF 15
              + V+KLKKALYGLKQAPRAWY+ LS+FL +  F  GK+D TLF
Sbjct: 1098 FPNHVFKLKKALYGLKQAPRAWYERLSKFLLKKSFKMGKIDTTLF 1142


>emb|CAN63777.1| hypothetical protein VITISV_043745 [Vitis vinifera]
          Length = 898

 Score =  286 bits (732), Expect = 5e-75
 Identities = 140/224 (62%), Positives = 174/224 (77%)
 Frame = -3

Query: 686  LQPDVRWLRDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQA 507
            L  D +++ +HP + +IG+   GV+TRS  +       FI QIEPK++  A+ D +W+ A
Sbjct: 580  LPKDWKFVINHPQDQIIGNPXSGVRTRSSLRNICNNLAFIXQIEPKNIKDAIVDENWMIA 639

Query: 506  MQEELNQFERNKVWELVQRPIHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGI 327
            MQEELNQFER++VWELV RP +Q+VIGTKWVFRNKM+E G +VRNKARLVA+GY QE  I
Sbjct: 640  MQEELNQFERSEVWELVPRPSNQSVIGTKWVFRNKMDENGIIVRNKARLVAQGYNQEXXI 699

Query: 326  DFDETFAPVARLEAIRMFLAYAAHKNFIVYQMDVKSAFLNGLLEEEVYVEQPPGFEQKTL 147
            D++ETFAPVARLEAIRM LA+A  K+FI+YQMDVKS FLNG + EEVY EQPPGF+    
Sbjct: 700  DYEETFAPVARLEAIRMLLAFACFKDFILYQMDVKSXFLNGFINEEVYXEQPPGFQSFNF 759

Query: 146  GDKVYKLKKALYGLKQAPRAWYDTLSQFLTENGFTKGKVDRTLF 15
             + V+KLKKALYGLKQAPRAWY+ LS+FL + GF  GK+D TLF
Sbjct: 760  PNHVFKLKKALYGLKQAPRAWYERLSKFLXKKGFKMGKIDTTLF 803


>gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]
          Length = 1892

 Score =  284 bits (727), Expect = 2e-74
 Identities = 140/216 (64%), Positives = 163/216 (75%)
 Frame = -3

Query: 662  RDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAMQEELNQF 483
            RDHP + ++GDI +GV TRSR         F+S IEP  V +AL D+ W+ AMQEELN F
Sbjct: 1347 RDHPVDTILGDIHKGVTTRSRVAHFCEHYSFVSSIEPHRVEEALQDSDWVVAMQEELNNF 1406

Query: 482  ERNKVWELVQRPIHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAP 303
             RN+VW LV RP +QNV+GTKWVFRNK +E G V RNKARLVAKGY Q EG+DFDET+AP
Sbjct: 1407 TRNEVWHLVPRP-NQNVVGTKWVFRNKQDEHGVVTRNKARLVAKGYSQVEGLDFDETYAP 1465

Query: 302  VARLEAIRMFLAYAAHKNFIVYQMDVKSAFLNGLLEEEVYVEQPPGFEQKTLGDKVYKLK 123
            VARLE+IR+ LAYA +  F +YQMDVKSAFLNG ++EEVYVEQPPGFE     + VY+L 
Sbjct: 1466 VARLESIRILLAYATYHGFKLYQMDVKSAFLNGPIKEEVYVEQPPGFEDSEYPNHVYRLS 1525

Query: 122  KALYGLKQAPRAWYDTLSQFLTENGFTKGKVDRTLF 15
            KALYGLKQAPRAWY+ L  FL  NGF  GK D TLF
Sbjct: 1526 KALYGLKQAPRAWYECLRDFLIANGFKVGKADPTLF 1561


>gb|AAN40030.1| putative gag-pol polyprotein [Zea mays]
          Length = 2319

 Score =  284 bits (726), Expect = 3e-74
 Identities = 142/216 (65%), Positives = 163/216 (75%)
 Frame = -3

Query: 662  RDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAMQEELNQF 483
            RDHP + ++G IR GV TRSR      F  F+S +EP  V +ALDD  WI AMQEELN F
Sbjct: 1278 RDHPVDNILGSIRRGVTTRSRLANFCEFYSFVSSLEPLKVEEALDDPDWITAMQEELNNF 1337

Query: 482  ERNKVWELVQRPIHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAP 303
             RN+VW LVQRP  QNVIGTKWVFRNK +E G V +NKARLVA+GY Q EG+DF ET+AP
Sbjct: 1338 TRNEVWSLVQRP-KQNVIGTKWVFRNKQDENGVVTKNKARLVAQGYTQVEGLDFGETYAP 1396

Query: 302  VARLEAIRMFLAYAAHKNFIVYQMDVKSAFLNGLLEEEVYVEQPPGFEQKTLGDKVYKLK 123
            VARLE+IR+ +AYA + +F +YQMDVKSAFLNG L+E VYVEQPPGFE     + VY L 
Sbjct: 1397 VARLESIRILIAYATNHDFKLYQMDVKSAFLNGPLQERVYVEQPPGFEDPKKPNHVYLLH 1456

Query: 122  KALYGLKQAPRAWYDTLSQFLTENGFTKGKVDRTLF 15
            KALYGLKQAPRAWYD L  FL +NGFT GK D TLF
Sbjct: 1457 KALYGLKQAPRAWYDCLKDFLIKNGFTIGKADSTLF 1492


>gb|AAN40035.1| putative gag-pol polyprotein [Zea mays]
          Length = 1706

 Score =  283 bits (723), Expect = 6e-74
 Identities = 140/216 (64%), Positives = 162/216 (75%)
 Frame = -3

Query: 662  RDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAMQEELNQF 483
            RDHP + ++GDI +GV TRSR         F+S IEP  V +AL D+ W+ AMQEELN F
Sbjct: 1365 RDHPVDTILGDIHKGVTTRSRVAHFCEHYSFVSSIEPHRVEEALQDSDWVVAMQEELNNF 1424

Query: 482  ERNKVWELVQRPIHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAP 303
             RN+VW LV RP +QNV+GTKWVFRNK +E G V RNKARLVAKGY Q EG+DF ET+AP
Sbjct: 1425 TRNEVWHLVPRP-NQNVVGTKWVFRNKQDEHGVVTRNKARLVAKGYSQVEGLDFGETYAP 1483

Query: 302  VARLEAIRMFLAYAAHKNFIVYQMDVKSAFLNGLLEEEVYVEQPPGFEQKTLGDKVYKLK 123
            VARLE+IR+ LAYA +  F +YQMDVKSAFLNG ++EEVYVEQPPGFE     + VYKL 
Sbjct: 1484 VARLESIRILLAYATYHGFKLYQMDVKSAFLNGPIKEEVYVEQPPGFEDSEYPNHVYKLS 1543

Query: 122  KALYGLKQAPRAWYDTLSQFLTENGFTKGKVDRTLF 15
            KALYGLKQAPRAWY+ L  FL  NGF  GK D TLF
Sbjct: 1544 KALYGLKQAPRAWYECLRDFLIANGFKVGKADPTLF 1579


>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
          Length = 1063

 Score =  281 bits (720), Expect = 1e-73
 Identities = 139/216 (64%), Positives = 162/216 (75%)
 Frame = -3

Query: 662  RDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAMQEELNQF 483
            RDHP + ++GDI +GV TRSR         F+S IEP  V +AL D+ W+ AMQEELN F
Sbjct: 518  RDHPVDTILGDIHKGVTTRSRVAHFCEHYSFVSSIEPHRVEEALQDSDWVVAMQEELNNF 577

Query: 482  ERNKVWELVQRPIHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAP 303
             RN+VW LV RP +QNV+GTKWVFRNK +E G V RNKARLVAKGY Q EG+DF ET+AP
Sbjct: 578  TRNEVWHLVPRP-NQNVVGTKWVFRNKQDEHGVVTRNKARLVAKGYSQVEGLDFGETYAP 636

Query: 302  VARLEAIRMFLAYAAHKNFIVYQMDVKSAFLNGLLEEEVYVEQPPGFEQKTLGDKVYKLK 123
            VARLE+IR+ LAYA +  F +YQMDVKSAFLNG ++EEVYVEQPPGFE     + VY+L 
Sbjct: 637  VARLESIRILLAYATYHGFKLYQMDVKSAFLNGPIKEEVYVEQPPGFEDSEYPNHVYRLS 696

Query: 122  KALYGLKQAPRAWYDTLSQFLTENGFTKGKVDRTLF 15
            KALYGLKQAPRAWY+ L  FL  NGF  GK D TLF
Sbjct: 697  KALYGLKQAPRAWYECLRDFLIANGFKVGKADPTLF 732


>gb|ABA98369.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 904

 Score =  281 bits (720), Expect = 1e-73
 Identities = 139/218 (63%), Positives = 164/218 (75%), Gaps = 2/218 (0%)
 Frame = -3

Query: 662  RDHPPELVIGDIREGVKTRSR--TQQEAMFTCFISQIEPKDVSQALDDTHWIQAMQEELN 489
            R HPPE +IG+I E   TRS+  T      + F++  EPKDVS AL D  WI AM EEL 
Sbjct: 451  RRHPPEQIIGNIGERT-TRSKVTTHDVCANSAFVASFEPKDVSHALTDESWINAMHEELE 509

Query: 488  QFERNKVWELVQRPIHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETF 309
             FERNKVW LV+ P   N+IGTKWVF+NK NE+G VVRNKARLVA+G+ Q EG+DFDETF
Sbjct: 510  NFERNKVWTLVEPPSGHNIIGTKWVFKNKQNEDGLVVRNKARLVAQGFTQVEGLDFDETF 569

Query: 308  APVARLEAIRMFLAYAAHKNFIVYQMDVKSAFLNGLLEEEVYVEQPPGFEQKTLGDKVYK 129
            AP+AR+EAIR+ L +AA K F +YQMDVKSAFLNG ++EEVYV+QPPGFE     + ++K
Sbjct: 570  APIARIEAIRLLLTFAASKGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPDFPNHIFK 629

Query: 128  LKKALYGLKQAPRAWYDTLSQFLTENGFTKGKVDRTLF 15
            L KALYGLKQAPRAWYD L  FL   GFT GKVD+TLF
Sbjct: 630  LSKALYGLKQAPRAWYDRLKNFLLAKGFTMGKVDKTLF 667


>gb|AAL76004.1|AF466646_12 putative gag-pol polyprotein [Zea mays]
          Length = 1694

 Score =  281 bits (720), Expect = 1e-73
 Identities = 139/216 (64%), Positives = 162/216 (75%)
 Frame = -3

Query: 662  RDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAMQEELNQF 483
            RDHP + ++GDI +GV TRSR         F+S IEP  V +AL D+ W+ AMQEELN F
Sbjct: 1318 RDHPVDTILGDIHKGVTTRSRVAHFCEHYSFVSSIEPHRVDEALQDSDWVVAMQEELNNF 1377

Query: 482  ERNKVWELVQRPIHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAP 303
             RN+VW LV RP +QNV+GTKWVFRNK +E G V RNKARLVAKGY Q EG+DF ET+AP
Sbjct: 1378 TRNEVWHLVPRP-NQNVVGTKWVFRNKQDEHGVVTRNKARLVAKGYSQVEGLDFGETYAP 1436

Query: 302  VARLEAIRMFLAYAAHKNFIVYQMDVKSAFLNGLLEEEVYVEQPPGFEQKTLGDKVYKLK 123
            VARLE+IR+ LAYA +  F +YQMDVKSAFLNG ++EEVYVEQPPGFE     + VY+L 
Sbjct: 1437 VARLESIRILLAYATYHGFKLYQMDVKSAFLNGPIKEEVYVEQPPGFEDSEYPNHVYRLS 1496

Query: 122  KALYGLKQAPRAWYDTLSQFLTENGFTKGKVDRTLF 15
            KALYGLKQAPRAWY+ L  FL  NGF  GK D TLF
Sbjct: 1497 KALYGLKQAPRAWYECLRDFLIANGFKVGKADPTLF 1532


>gb|AAL75488.1|AF466202_14 putative pol protein [Zea mays]
          Length = 800

 Score =  281 bits (720), Expect = 1e-73
 Identities = 139/216 (64%), Positives = 162/216 (75%)
 Frame = -3

Query: 662 RDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAMQEELNQF 483
           RDHP + ++GDI +GV TRSR         F+S IEP  V +AL D+ W+ AMQEELN F
Sbjct: 297 RDHPVDTILGDIHKGVTTRSRVAHFCEHYSFVSSIEPHRVEEALQDSDWVVAMQEELNNF 356

Query: 482 ERNKVWELVQRPIHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAP 303
            RN+VW LV RP +QNV+GTKWVFRNK +E G V RNKARLVAKGY Q EG+DF ET+AP
Sbjct: 357 TRNEVWHLVPRP-NQNVVGTKWVFRNKQDEHGVVTRNKARLVAKGYSQVEGLDFGETYAP 415

Query: 302 VARLEAIRMFLAYAAHKNFIVYQMDVKSAFLNGLLEEEVYVEQPPGFEQKTLGDKVYKLK 123
           VARLE+IR+ LAYA +  F +YQMDVKSAFLNG ++EEVYVEQPPGFE     + VY+L 
Sbjct: 416 VARLESIRILLAYATYHGFKLYQMDVKSAFLNGPIKEEVYVEQPPGFEDSEYPNHVYRLS 475

Query: 122 KALYGLKQAPRAWYDTLSQFLTENGFTKGKVDRTLF 15
           KALYGLKQAPRAWY+ L  FL  NGF  GK D TLF
Sbjct: 476 KALYGLKQAPRAWYECLRDFLIANGFKVGKADPTLF 511


>gb|ABF67921.1| Ji1 putative pol protein [Zea mays]
          Length = 1063

 Score =  281 bits (720), Expect = 1e-73
 Identities = 139/216 (64%), Positives = 162/216 (75%)
 Frame = -3

Query: 662  RDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAMQEELNQF 483
            RDHP + ++GDI +GV TRSR         F+S IEP  V +AL D+ W+ AMQEELN F
Sbjct: 518  RDHPVDTILGDIHKGVTTRSRVAHFCEHYSFVSSIEPHRVEEALQDSDWVVAMQEELNNF 577

Query: 482  ERNKVWELVQRPIHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAP 303
             RN+VW LV RP +QNV+GTKWVFRNK +E G V RNKARLVAKGY Q EG+DF ET+AP
Sbjct: 578  TRNEVWHLVPRP-NQNVVGTKWVFRNKQDEHGVVTRNKARLVAKGYSQVEGLDFGETYAP 636

Query: 302  VARLEAIRMFLAYAAHKNFIVYQMDVKSAFLNGLLEEEVYVEQPPGFEQKTLGDKVYKLK 123
            VARLE+IR+ LAYA +  F +YQMDVKSAFLNG ++EEVYVEQPPGFE     + VY+L 
Sbjct: 637  VARLESIRILLAYATYHGFKLYQMDVKSAFLNGPIKEEVYVEQPPGFEDSEYPNHVYRLS 696

Query: 122  KALYGLKQAPRAWYDTLSQFLTENGFTKGKVDRTLF 15
            KALYGLKQAPRAWY+ L  FL  NGF  GK D TLF
Sbjct: 697  KALYGLKQAPRAWYECLRDFLIANGFKVGKADPTLF 732


>gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays]
          Length = 1760

 Score =  281 bits (719), Expect = 2e-73
 Identities = 139/216 (64%), Positives = 162/216 (75%)
 Frame = -3

Query: 662  RDHPPELVIGDIREGVKTRSRTQQEAMFTCFISQIEPKDVSQALDDTHWIQAMQEELNQF 483
            +DHP + ++GDI +GV TRSR         F+S IEP  V +AL D+ W+ AMQEELN F
Sbjct: 1215 QDHPVDTILGDIHKGVTTRSRVAHFCEHYSFVSSIEPHRVEEALQDSDWVVAMQEELNNF 1274

Query: 482  ERNKVWELVQRPIHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAP 303
             RN+VW LV RP +QNV+GTKWVFRNK +E G V RNKARLVAKGY Q EG+DF ET+AP
Sbjct: 1275 TRNEVWHLVPRP-NQNVVGTKWVFRNKQDEHGVVTRNKARLVAKGYSQVEGLDFGETYAP 1333

Query: 302  VARLEAIRMFLAYAAHKNFIVYQMDVKSAFLNGLLEEEVYVEQPPGFEQKTLGDKVYKLK 123
            VARLE+IR+ LAYA +  F +YQMDVKSAFLNG ++EEVYVEQPPGFE     + VYKL 
Sbjct: 1334 VARLESIRILLAYATYHGFKLYQMDVKSAFLNGPIKEEVYVEQPPGFEDSEYPNHVYKLS 1393

Query: 122  KALYGLKQAPRAWYDTLSQFLTENGFTKGKVDRTLF 15
            KALYGLKQAPRAWY+ L  FL  NGF  GK D TLF
Sbjct: 1394 KALYGLKQAPRAWYECLRDFLIANGFKVGKADPTLF 1429