BLASTX nr result
ID: Rehmannia26_contig00006333
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00006333
(503 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006478863.1| PREDICTED: uncharacterized protein At3g49140... 45 3e-07
ref|XP_006443120.1| hypothetical protein CICLE_v10021185mg [Citr... 45 3e-07
ref|XP_004296717.1| PREDICTED: uncharacterized protein At3g49140... 40 3e-07
ref|XP_006347461.1| PREDICTED: uncharacterized protein At3g49140... 47 6e-07
ref|XP_004241392.1| PREDICTED: uncharacterized protein LOC101247... 47 8e-07
gb|EOY04956.1| Pentatricopeptide repeat superfamily protein isof... 48 5e-06
gb|EOY04957.1| Pentatricopeptide repeat (PPR) superfamily protei... 48 5e-06
>ref|XP_006478863.1| PREDICTED: uncharacterized protein At3g49140-like isoform X1
[Citrus sinensis]
Length = 468
Score = 45.1 bits (105), Expect(2) = 3e-07
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +1
Query: 340 NPFFGTTRCHWLPQIHDICIXXXXXXXXXXXXXXXXXXXXNRNGYHPLEELRDH 501
NPFFG+T+ +WL D+C+ N GYHPLEEL+ H
Sbjct: 59 NPFFGSTKFNWLSTGRDLCLSKVSVAADYSDSVPDSSNYVNNRGYHPLEELKFH 112
Score = 35.0 bits (79), Expect(2) = 3e-07
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 192 CHKCHGDPIICSTSYGFSGSWIKAP 266
CH C + I CSTS G + +WIK P
Sbjct: 20 CHLCRAEGISCSTSNGITSTWIKNP 44
>ref|XP_006443120.1| hypothetical protein CICLE_v10021185mg [Citrus clementina]
gi|557545382|gb|ESR56360.1| hypothetical protein
CICLE_v10021185mg [Citrus clementina]
Length = 321
Score = 45.1 bits (105), Expect(2) = 3e-07
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +1
Query: 340 NPFFGTTRCHWLPQIHDICIXXXXXXXXXXXXXXXXXXXXNRNGYHPLEELRDH 501
NPFFG+T+ +WL D+C+ N GYHPLEEL+ H
Sbjct: 59 NPFFGSTKFNWLSTGRDLCLSKVSVAADYSDSVPDSSNYVNNRGYHPLEELKFH 112
Score = 35.0 bits (79), Expect(2) = 3e-07
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 192 CHKCHGDPIICSTSYGFSGSWIKAP 266
CH C + I CSTS G + +WIK P
Sbjct: 20 CHLCRAEGISCSTSNGITSTWIKNP 44
>ref|XP_004296717.1| PREDICTED: uncharacterized protein At3g49140-like [Fragaria vesca
subsp. vesca]
Length = 463
Score = 40.0 bits (92), Expect(2) = 3e-07
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 189 YCHKCHGDPIICSTSYGFSGSWIKAPFE 272
+CH CH + + CST +G S SW+K F+
Sbjct: 15 HCHSCHTEGVCCSTKHGISNSWMKPHFD 42
Score = 39.7 bits (91), Expect(2) = 3e-07
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 319 GLSFRSGNPFFGTTRCHWLPQIHDICIXXXXXXXXXXXXXXXXXXXXNRNGYHPLEELR 495
G+S + NP G T+ HWL H +C+ GYHPLEE++
Sbjct: 51 GVSLKCRNPLVGPTQFHWLSIGHGLCLSKVFVAADFSDSAPESSSYMTNQGYHPLEEVK 109
>ref|XP_006347461.1| PREDICTED: uncharacterized protein At3g49140-like [Solanum
tuberosum]
Length = 485
Score = 47.0 bits (110), Expect(2) = 6e-07
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +1
Query: 298 QRVFQYQGLSFRSGNPFFGTTRCHWLPQIHDICIXXXXXXXXXXXXXXXXXXXXNRNGYH 477
QR + G+SFR+ NPFFG + HWL H+ + + YH
Sbjct: 45 QRFSDHSGISFRTENPFFGAAQSHWLAVGHESSLSRISVAADYPDSVPDSPNYVGNSSYH 104
Query: 478 PLEELRD 498
PLE +RD
Sbjct: 105 PLEGMRD 111
Score = 32.0 bits (71), Expect(2) = 6e-07
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 192 CHKCHGDPIICSTSYGFSGSWIKAPFE 272
C CH D CS S+G + SWIK E
Sbjct: 17 CFICHADGGSCSASFGATSSWIKPSHE 43
>ref|XP_004241392.1| PREDICTED: uncharacterized protein LOC101247332 [Solanum
lycopersicum]
Length = 467
Score = 46.6 bits (109), Expect(2) = 8e-07
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +1
Query: 313 YQGLSFRSGNPFFGTTRCHWLPQIHDICIXXXXXXXXXXXXXXXXXXXXNRNGYHPLEEL 492
+ G+SFR+ NPFFG + HWL H+ + +GYHPLE +
Sbjct: 50 HSGISFRTENPFFGAAQSHWLAVGHESSLSRISVAADYPDSVPDSPNYVRNSGYHPLEGM 109
Query: 493 RD 498
RD
Sbjct: 110 RD 111
Score = 32.0 bits (71), Expect(2) = 8e-07
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 192 CHKCHGDPIICSTSYGFSGSWIKAPFE 272
C CH D CS S G + SWIK +E
Sbjct: 17 CFICHADGGSCSASLGAASSWIKPSYE 43
>gb|EOY04956.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao]
Length = 486
Score = 48.1 bits (113), Expect(2) = 5e-06
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +1
Query: 301 RVFQYQGLSFRSGNPFFGTTRCHWLPQIHDICIXXXXXXXXXXXXXXXXXXXXNRNGYHP 480
R G+SFR +PFFG+T+ HW HD C+ GYHP
Sbjct: 45 RTSDLSGVSFRCRSPFFGSTQFHWWSAGHDHCLSKVSVAADYSDSVPDSSSYARNQGYHP 104
Query: 481 LEELR 495
LEEL+
Sbjct: 105 LEELK 109
Score = 27.7 bits (60), Expect(2) = 5e-06
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 192 CHKCHGDPIICSTSYGFSGSWIKAPFE 272
CH C + + S +G + SW+K F+
Sbjct: 16 CHLCQVEGVYYSPLHGVNSSWVKTTFD 42
>gb|EOY04957.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
[Theobroma cacao]
Length = 467
Score = 48.1 bits (113), Expect(2) = 5e-06
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +1
Query: 301 RVFQYQGLSFRSGNPFFGTTRCHWLPQIHDICIXXXXXXXXXXXXXXXXXXXXNRNGYHP 480
R G+SFR +PFFG+T+ HW HD C+ GYHP
Sbjct: 45 RTSDLSGVSFRCRSPFFGSTQFHWWSAGHDHCLSKVSVAADYSDSVPDSSSYARNQGYHP 104
Query: 481 LEELR 495
LEEL+
Sbjct: 105 LEELK 109
Score = 27.7 bits (60), Expect(2) = 5e-06
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 192 CHKCHGDPIICSTSYGFSGSWIKAPFE 272
CH C + + S +G + SW+K F+
Sbjct: 16 CHLCQVEGVYYSPLHGVNSSWVKTTFD 42