BLASTX nr result
ID: Rehmannia26_contig00006223
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00006223
(845 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004294361.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT... 247 4e-63
ref|XP_002319824.1| predicted protein [Populus trichocarpa] 242 1e-61
gb|EMJ13355.1| hypothetical protein PRUPE_ppa012342mg [Prunus pe... 242 1e-61
ref|XP_006370666.1| hypothetical protein POPTR_0001s44690g [Popu... 241 2e-61
ref|XP_002281441.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT... 241 2e-61
emb|CAN65357.1| hypothetical protein VITISV_041274 [Vitis vinifera] 241 3e-61
ref|NP_001236074.1| uncharacterized protein LOC100500557 [Glycin... 240 5e-61
gb|ABK94006.1| unknown [Populus trichocarpa] 239 9e-61
ref|XP_006452238.1| hypothetical protein CICLE_v10009689mg [Citr... 236 6e-60
gb|EOY12458.1| Ankyrin repeat family protein [Theobroma cacao] 236 8e-60
gb|AFK46964.1| unknown [Lotus japonicus] 235 1e-59
gb|EPS57502.1| hypothetical protein M569_17316, partial [Genlise... 235 2e-59
gb|AAG50930.1|AC079284_5 unknown protein [Arabidopsis thaliana] 233 5e-59
ref|NP_001238318.1| uncharacterized protein LOC100499940 [Glycin... 233 5e-59
ref|NP_564580.1| protein GRANA DEFICIENT CHLOROPLAST 1 [Arabidop... 233 6e-59
ref|XP_006352499.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT... 232 1e-58
ref|XP_006406371.1| hypothetical protein EUTSA_v10021639mg [Eutr... 231 2e-58
ref|XP_002522996.1| conserved hypothetical protein [Ricinus comm... 231 2e-58
ref|XP_006305698.1| hypothetical protein CARUB_v10010432mg [Caps... 230 4e-58
gb|ESW18409.1| hypothetical protein PHAVU_006G038600g [Phaseolus... 230 5e-58
>ref|XP_004294361.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Fragaria vesca
subsp. vesca]
Length = 175
Score = 247 bits (630), Expect = 4e-63
Identities = 130/178 (73%), Positives = 142/178 (79%)
Frame = +2
Query: 89 STVPSTLQPKFSLKPNPSTSIRPPVTILPKLNSEFLGSIRNIGGCRSTRKLGPSCGSRTT 268
+++P T P S S S P + + KLN+ FLG+ +G R LGPS GSR
Sbjct: 2 ASIPCTTAPTHSCFA--SNSFNSPTSSV-KLNTRFLGTRNRLGWVRPFG-LGPSNGSRAK 57
Query: 269 CWFRFGKNGVDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLEQNIHP 448
CWF+FGKNGVDAEGAGIYGSQ+RDDFD+DDVEQYFNYMGMLAVEG+YDKM ALL QNIHP
Sbjct: 58 CWFKFGKNGVDAEGAGIYGSQSRDDFDKDDVEQYFNYMGMLAVEGTYDKMNALLSQNIHP 117
Query: 449 VDILLLMAASEGDKPKIEELLRAGADYTVKDAQGRTALDRAATDEIKDFILGFSVQKA 622
VDILLLMAASEGDKPKIEELLRAGA Y VKDA GRTALDRAA DEIKDFILGFSVQKA
Sbjct: 118 VDILLLMAASEGDKPKIEELLRAGASYNVKDADGRTALDRAANDEIKDFILGFSVQKA 175
>ref|XP_002319824.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 242 bits (618), Expect = 1e-61
Identities = 129/180 (71%), Positives = 143/180 (79%)
Frame = +2
Query: 83 MASTVPSTLQPKFSLKPNPSTSIRPPVTILPKLNSEFLGSIRNIGGCRSTRKLGPSCGSR 262
MAS + +T +L NP +S LPKLNS+FLG N+G R R +GPS GSR
Sbjct: 1 MASILSTT---HLTLASNPQSS----QPFLPKLNSQFLGLQSNVGWLRPCR-IGPSNGSR 52
Query: 263 TTCWFRFGKNGVDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLEQNI 442
CWF+FGKNGVDAEGAGIYGSQ RDDFDRDDVEQYFNYMGMLAVEG+YDKMEALL QNI
Sbjct: 53 AKCWFKFGKNGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNI 112
Query: 443 HPVDILLLMAASEGDKPKIEELLRAGADYTVKDAQGRTALDRAATDEIKDFILGFSVQKA 622
HPVDILL++AASEGDKPKIEELLRAGA Y +KDA GRTALDR A +E KDFILG SV+KA
Sbjct: 113 HPVDILLMLAASEGDKPKIEELLRAGAGYDIKDADGRTALDR-ANEETKDFILGLSVRKA 171
>gb|EMJ13355.1| hypothetical protein PRUPE_ppa012342mg [Prunus persica]
Length = 173
Score = 242 bits (617), Expect = 1e-61
Identities = 120/149 (80%), Positives = 130/149 (87%)
Frame = +2
Query: 176 KLNSEFLGSIRNIGGCRSTRKLGPSCGSRTTCWFRFGKNGVDAEGAGIYGSQARDDFDRD 355
K N+ F+G+ +G R LGPS GSR CWF+FGKNGVDAEGAGIYGSQ+RDDFDRD
Sbjct: 26 KFNTRFVGTRNRLGWVRPLG-LGPSNGSRAKCWFKFGKNGVDAEGAGIYGSQSRDDFDRD 84
Query: 356 DVEQYFNYMGMLAVEGSYDKMEALLEQNIHPVDILLLMAASEGDKPKIEELLRAGADYTV 535
DVEQYFNYMGMLAVEG+YDKM ALL QNIHPVDILLLMAASEGDKPKIEELLRAGA Y++
Sbjct: 85 DVEQYFNYMGMLAVEGTYDKMNALLSQNIHPVDILLLMAASEGDKPKIEELLRAGASYSI 144
Query: 536 KDAQGRTALDRAATDEIKDFILGFSVQKA 622
KD GRTALDRAA+DEIKDFILGFSVQKA
Sbjct: 145 KDVDGRTALDRAASDEIKDFILGFSVQKA 173
>ref|XP_006370666.1| hypothetical protein POPTR_0001s44690g [Populus trichocarpa]
gi|550349872|gb|ERP67235.1| hypothetical protein
POPTR_0001s44690g [Populus trichocarpa]
Length = 171
Score = 241 bits (616), Expect = 2e-61
Identities = 129/180 (71%), Positives = 143/180 (79%)
Frame = +2
Query: 83 MASTVPSTLQPKFSLKPNPSTSIRPPVTILPKLNSEFLGSIRNIGGCRSTRKLGPSCGSR 262
MAS + +T +L NP +S LPKLNS+FLG N+G R R +GPS GSR
Sbjct: 1 MASILSTT---HLTLASNPQSS----QPFLPKLNSQFLGLQSNVGWLRPCR-IGPSNGSR 52
Query: 263 TTCWFRFGKNGVDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLEQNI 442
CWF+FGKNGVDAEGAGIYGSQ RDDFDRDDVEQYFNYMGMLAVEG+YDKMEALL QNI
Sbjct: 53 AKCWFKFGKNGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNI 112
Query: 443 HPVDILLLMAASEGDKPKIEELLRAGADYTVKDAQGRTALDRAATDEIKDFILGFSVQKA 622
HPVDILL++AASEGDKPKIEELLRAGA Y +KDA GRTALDR A +E KDFILG SV+KA
Sbjct: 113 HPVDILLMLAASEGDKPKIEELLRAGAVYDIKDADGRTALDR-ANEETKDFILGLSVRKA 171
>ref|XP_002281441.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT [Vitis vinifera]
gi|297735982|emb|CBI23956.3| unnamed protein product
[Vitis vinifera]
Length = 172
Score = 241 bits (615), Expect = 2e-61
Identities = 127/178 (71%), Positives = 138/178 (77%)
Frame = +2
Query: 89 STVPSTLQPKFSLKPNPSTSIRPPVTILPKLNSEFLGSIRNIGGCRSTRKLGPSCGSRTT 268
+++P T F+ KP S S PP+ S+ LG R + TR LGPS GSR T
Sbjct: 2 ASIPCTTHLLFTSKPQISPS-NPPI-----FTSQLLGIPRKLSWSTPTR-LGPSNGSRAT 54
Query: 269 CWFRFGKNGVDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLEQNIHP 448
CWFRFG GVDAEGAGIYGSQ RDDFDRDDVEQYFNYMGMLAVEG+YDKMEALL QNIHP
Sbjct: 55 CWFRFGNRGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHP 114
Query: 449 VDILLLMAASEGDKPKIEELLRAGADYTVKDAQGRTALDRAATDEIKDFILGFSVQKA 622
VDILL+MAASEGD+PKIEELLRAGA YTVKDA GRTAL+RAA DEIKD IL FS QKA
Sbjct: 115 VDILLMMAASEGDQPKIEELLRAGASYTVKDADGRTALERAANDEIKDLILNFSTQKA 172
>emb|CAN65357.1| hypothetical protein VITISV_041274 [Vitis vinifera]
Length = 172
Score = 241 bits (614), Expect = 3e-61
Identities = 127/178 (71%), Positives = 138/178 (77%)
Frame = +2
Query: 89 STVPSTLQPKFSLKPNPSTSIRPPVTILPKLNSEFLGSIRNIGGCRSTRKLGPSCGSRTT 268
+++P T F+ KP S S PP+ S+ LG R + TR LGPS GSR T
Sbjct: 2 ASIPCTTHLLFTSKPQISPS-NPPI-----FTSQXLGIPRKLSWSTPTR-LGPSNGSRAT 54
Query: 269 CWFRFGKNGVDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLEQNIHP 448
CWFRFG GVDAEGAGIYGSQ RDDFDRDDVEQYFNYMGMLAVEG+YDKMEALL QNIHP
Sbjct: 55 CWFRFGNRGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHP 114
Query: 449 VDILLLMAASEGDKPKIEELLRAGADYTVKDAQGRTALDRAATDEIKDFILGFSVQKA 622
VDILL+MAASEGD+PKIEELLRAGA YTVKDA GRTAL+RAA DEIKD IL FS QKA
Sbjct: 115 VDILLMMAASEGDQPKIEELLRAGASYTVKDADGRTALERAANDEIKDLILNFSTQKA 172
>ref|NP_001236074.1| uncharacterized protein LOC100500557 [Glycine max]
gi|255630625|gb|ACU15672.1| unknown [Glycine max]
Length = 181
Score = 240 bits (612), Expect = 5e-61
Identities = 124/165 (75%), Positives = 135/165 (81%), Gaps = 1/165 (0%)
Frame = +2
Query: 131 PNPSTSIRPPVTILPKLNSEFLGSIRNIGGCRST-RKLGPSCGSRTTCWFRFGKNGVDAE 307
PN + + P L S FLG+ R +G T R +GPS GS++TCWFRFGKNGVDA+
Sbjct: 18 PNNNNAFPSPHVSASNLASRFLGTRRRVGSHSLTSRIIGPSNGSKSTCWFRFGKNGVDAQ 77
Query: 308 GAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLEQNIHPVDILLLMAASEGD 487
GAGIYGSQ RDDFDRDDVEQYFNYMGML VEG+YDKMEALL QNIHPVDILLL+AASEGD
Sbjct: 78 GAGIYGSQGRDDFDRDDVEQYFNYMGMLTVEGTYDKMEALLSQNIHPVDILLLLAASEGD 137
Query: 488 KPKIEELLRAGADYTVKDAQGRTALDRAATDEIKDFILGFSVQKA 622
KPKIEELLRAGA Y VKDA GRTALDRAA DEIKDFIL FSVQ+A
Sbjct: 138 KPKIEELLRAGAKYDVKDADGRTALDRAA-DEIKDFILNFSVQRA 181
>gb|ABK94006.1| unknown [Populus trichocarpa]
Length = 171
Score = 239 bits (610), Expect = 9e-61
Identities = 128/180 (71%), Positives = 142/180 (78%)
Frame = +2
Query: 83 MASTVPSTLQPKFSLKPNPSTSIRPPVTILPKLNSEFLGSIRNIGGCRSTRKLGPSCGSR 262
MAS + +T +L NP +S LPKLNS+FLG N+G R R +GPS GSR
Sbjct: 1 MASILSTT---HLTLASNPQSS----QPFLPKLNSQFLGLQSNVGWLRPCR-IGPSNGSR 52
Query: 263 TTCWFRFGKNGVDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLEQNI 442
CWF+FGKNGVDAEG GIYGSQ RDDFDRDDVEQYFNYMGMLAVEG+YDKMEALL QNI
Sbjct: 53 AKCWFKFGKNGVDAEGDGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNI 112
Query: 443 HPVDILLLMAASEGDKPKIEELLRAGADYTVKDAQGRTALDRAATDEIKDFILGFSVQKA 622
HPVDILL++AASEGDKPKIEELLRAGA Y +KDA GRTALDR A +E KDFILG SV+KA
Sbjct: 113 HPVDILLMLAASEGDKPKIEELLRAGAVYDIKDADGRTALDR-ANEETKDFILGLSVRKA 171
>ref|XP_006452238.1| hypothetical protein CICLE_v10009689mg [Citrus clementina]
gi|568882260|ref|XP_006493957.1| PREDICTED: protein LHCP
TRANSLOCATION DEFECT-like [Citrus sinensis]
gi|557555464|gb|ESR65478.1| hypothetical protein
CICLE_v10009689mg [Citrus clementina]
Length = 173
Score = 236 bits (603), Expect = 6e-60
Identities = 126/180 (70%), Positives = 140/180 (77%)
Frame = +2
Query: 83 MASTVPSTLQPKFSLKPNPSTSIRPPVTILPKLNSEFLGSIRNIGGCRSTRKLGPSCGSR 262
MAS T F KP+ S S K +S+FLG+ N+ R +R +GPS GSR
Sbjct: 1 MASIPCITASIHFVSKPSNSQSS------CTKFSSQFLGTKNNLKCFRPSR-IGPSNGSR 53
Query: 263 TTCWFRFGKNGVDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLEQNI 442
CWF+FGKNGVDAE AGIYGSQ RDDFDRDDVEQYFNYMGMLAVEG+YDKMEALL QNI
Sbjct: 54 AQCWFKFGKNGVDAENAGIYGSQKRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNI 113
Query: 443 HPVDILLLMAASEGDKPKIEELLRAGADYTVKDAQGRTALDRAATDEIKDFILGFSVQKA 622
HPVDILL++AASEGDKPKIEELLRAGA YTVKDA GRTAL+RA ++EIKD IL FSVQKA
Sbjct: 114 HPVDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPSEEIKDLILNFSVQKA 173
>gb|EOY12458.1| Ankyrin repeat family protein [Theobroma cacao]
Length = 190
Score = 236 bits (602), Expect = 8e-60
Identities = 125/196 (63%), Positives = 145/196 (73%), Gaps = 18/196 (9%)
Frame = +2
Query: 89 STVPSTLQPKFSLKPNPSTSIRPPVTILPKLNSEFLGSIRNIGGCRSTRKLGPSCGSRTT 268
+++P T+Q F+ KP S + PK +S+FLG+ +++ R +R +GPS GS+T
Sbjct: 2 NSIPCTVQIPFTSKPINS------LPSFPKFSSKFLGTQKSLSWVRPSR-IGPSNGSKTQ 54
Query: 269 CWFRFGKNGVDAEGAGIYGSQARDDFDRDDVEQ------------------YFNYMGMLA 394
CWFRFGKNGVDAEGAGIYGSQ RDDFDRDDVEQ YFNYMGMLA
Sbjct: 55 CWFRFGKNGVDAEGAGIYGSQTRDDFDRDDVEQFYFLELEDMVDEGVEENMYFNYMGMLA 114
Query: 395 VEGSYDKMEALLEQNIHPVDILLLMAASEGDKPKIEELLRAGADYTVKDAQGRTALDRAA 574
VEGSYDKMEALL QNIHPVDILL++AASEGDKPKIEELLRAGA Y VKDA GRTA+DRA
Sbjct: 115 VEGSYDKMEALLNQNIHPVDILLMLAASEGDKPKIEELLRAGASYDVKDADGRTAIDRAV 174
Query: 575 TDEIKDFILGFSVQKA 622
+E+KD IL FSVQKA
Sbjct: 175 NEEVKDLILSFSVQKA 190
>gb|AFK46964.1| unknown [Lotus japonicus]
Length = 175
Score = 235 bits (600), Expect = 1e-59
Identities = 125/180 (69%), Positives = 140/180 (77%)
Frame = +2
Query: 83 MASTVPSTLQPKFSLKPNPSTSIRPPVTILPKLNSEFLGSIRNIGGCRSTRKLGPSCGSR 262
MAS++ + + N S+ PV+ L L S FLG R +G R T +GPS GS+
Sbjct: 1 MASSIACITHQPITSRLN---SLPSPVSSL-NLASGFLGIRRRVGCLRLTSSIGPSNGSK 56
Query: 263 TTCWFRFGKNGVDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLEQNI 442
TCWFRFGKNGVDAEGAGIYGSQ+RDDFDRDDVEQYFNYMGMLAVEG+YDKMEALL Q I
Sbjct: 57 ATCWFRFGKNGVDAEGAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQKI 116
Query: 443 HPVDILLLMAASEGDKPKIEELLRAGADYTVKDAQGRTALDRAATDEIKDFILGFSVQKA 622
HPVDILLL+AASEGD PKIEELLRAGA Y V+D GRTALDR A DE+KDFIL FSVQ+A
Sbjct: 117 HPVDILLLLAASEGDMPKIEELLRAGAKYDVRDGDGRTALDR-ANDEVKDFILNFSVQRA 175
>gb|EPS57502.1| hypothetical protein M569_17316, partial [Genlisea aurea]
Length = 147
Score = 235 bits (599), Expect = 2e-59
Identities = 116/139 (83%), Positives = 123/139 (88%)
Frame = +2
Query: 206 RNIGGCRSTRKLGPSCGSRTTCWFRFGKNGVDAEGAGIYGSQARDDFDRDDVEQYFNYMG 385
R +G R R LGP+ GSRTTCWFRFGKNGVDAEGAG+YGSQ RDDFDRDDVEQYFNYMG
Sbjct: 9 RRLGIPRPARALGPTSGSRTTCWFRFGKNGVDAEGAGVYGSQGRDDFDRDDVEQYFNYMG 68
Query: 386 MLAVEGSYDKMEALLEQNIHPVDILLLMAASEGDKPKIEELLRAGADYTVKDAQGRTALD 565
MLAVEGSYDKMEALL QNIHPVDILLLMAA+EGDKPKIEELLRAGAD TV A GRTALD
Sbjct: 69 MLAVEGSYDKMEALLNQNIHPVDILLLMAAAEGDKPKIEELLRAGADCTVAGADGRTALD 128
Query: 566 RAATDEIKDFILGFSVQKA 622
+AATDEI++FIL S QKA
Sbjct: 129 KAATDEIREFILNLSPQKA 147
>gb|AAG50930.1|AC079284_5 unknown protein [Arabidopsis thaliana]
Length = 257
Score = 233 bits (595), Expect = 5e-59
Identities = 123/182 (67%), Positives = 147/182 (80%), Gaps = 1/182 (0%)
Frame = +2
Query: 80 AMASTVPSTLQPKFSLKPNPSTSIRPPVTILPKL-NSEFLGSIRNIGGCRSTRKLGPSCG 256
AMAS+ S FS P+ +TS+ + P+L +S FLG+ RN+ +LGPS G
Sbjct: 82 AMASSSIS-----FSCAPSLATSLFSTTSSSPRLLSSRFLGT-RNLKLRIRPARLGPSNG 135
Query: 257 SRTTCWFRFGKNGVDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLEQ 436
SRTTCWF+FGKNGVDAE AGIYGSQ+RDDFDRDDVEQYFNYMGMLAVEG+Y KMEALL
Sbjct: 136 SRTTCWFKFGKNGVDAENAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYSKMEALLNL 195
Query: 437 NIHPVDILLLMAASEGDKPKIEELLRAGADYTVKDAQGRTALDRAATDEIKDFILGFSVQ 616
NIHPVDILL++AA+EGD+PKIEELL+AGADY+VKDA GRTA+DRA ++EI+D ILG+S Q
Sbjct: 196 NIHPVDILLMLAATEGDRPKIEELLKAGADYSVKDADGRTAIDRANSEEIRDLILGYSTQ 255
Query: 617 KA 622
KA
Sbjct: 256 KA 257
>ref|NP_001238318.1| uncharacterized protein LOC100499940 [Glycine max]
gi|255627865|gb|ACU14277.1| unknown [Glycine max]
Length = 177
Score = 233 bits (595), Expect = 5e-59
Identities = 128/181 (70%), Positives = 140/181 (77%), Gaps = 1/181 (0%)
Frame = +2
Query: 83 MASTVPSTLQPKFSLKPNPSTSIRPPVTILPKLNSEFLGSIRNIG-GCRSTRKLGPSCGS 259
MAS T P S N +S P L S FLG+ + +G ++R +GPS GS
Sbjct: 1 MASISCITHHPITSKLNNAFSS---PHVSASNLASRFLGTRKRVGLHSLTSRIIGPSNGS 57
Query: 260 RTTCWFRFGKNGVDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLEQN 439
+ TCWFRFGKNGVDA+GAGIYGSQ RDDFDRDDVEQYFNYMGMLAVEG+YDKMEALL QN
Sbjct: 58 KATCWFRFGKNGVDAKGAGIYGSQGRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQN 117
Query: 440 IHPVDILLLMAASEGDKPKIEELLRAGADYTVKDAQGRTALDRAATDEIKDFILGFSVQK 619
IHPVDILLL+AASE DKPKIEELLRAGA Y VKDA GRTALDR ATDEIKDFIL FSVQ+
Sbjct: 118 IHPVDILLLLAASESDKPKIEELLRAGAKYDVKDADGRTALDR-ATDEIKDFILNFSVQR 176
Query: 620 A 622
A
Sbjct: 177 A 177
>ref|NP_564580.1| protein GRANA DEFICIENT CHLOROPLAST 1 [Arabidopsis thaliana]
gi|75248476|sp|Q8VY88.1|LTD_ARATH RecName: Full=Protein
LHCP TRANSLOCATION DEFECT; AltName: Full=Protein
GRANA-DEFICIENT CHLOROPLAST 1; Flags: Precursor
gi|18252245|gb|AAL61955.1| unknown protein [Arabidopsis
thaliana] gi|21386977|gb|AAM47892.1| unknown protein
[Arabidopsis thaliana] gi|21553984|gb|AAM63065.1|
unknown [Arabidopsis thaliana]
gi|332194478|gb|AEE32599.1| Ankyrin repeat family
protein [Arabidopsis thaliana]
Length = 175
Score = 233 bits (594), Expect = 6e-59
Identities = 118/169 (69%), Positives = 141/169 (83%), Gaps = 1/169 (0%)
Frame = +2
Query: 119 FSLKPNPSTSIRPPVTILPKL-NSEFLGSIRNIGGCRSTRKLGPSCGSRTTCWFRFGKNG 295
FS P+ +TS+ + P+L +S FLG+ RN+ +LGPS GSRTTCWF+FGKNG
Sbjct: 8 FSCAPSLATSLFSTTSSSPRLLSSRFLGT-RNLKLRIRPARLGPSNGSRTTCWFKFGKNG 66
Query: 296 VDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLEQNIHPVDILLLMAA 475
VDAE AGIYGSQ+RDDFDRDDVEQYFNYMGMLAVEG+Y KMEALL NIHPVDILL++AA
Sbjct: 67 VDAENAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYSKMEALLNLNIHPVDILLMLAA 126
Query: 476 SEGDKPKIEELLRAGADYTVKDAQGRTALDRAATDEIKDFILGFSVQKA 622
+EGD+PKIEELL+AGADY+VKDA GRTA+DRA ++EI+D ILG+S QKA
Sbjct: 127 TEGDRPKIEELLKAGADYSVKDADGRTAIDRANSEEIRDLILGYSTQKA 175
>ref|XP_006352499.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Solanum
tuberosum]
Length = 172
Score = 232 bits (592), Expect = 1e-58
Identities = 124/181 (68%), Positives = 144/181 (79%), Gaps = 3/181 (1%)
Frame = +2
Query: 89 STVPSTLQPKFSL-KPNPSTSIRPPVTILPKLNSEFLG--SIRNIGGCRSTRKLGPSCGS 259
+++P TL FS +PN S+S KLNS F+G +++IG CR + LGP+CGS
Sbjct: 2 ASIPCTLHLTFSSSRPNFSSSCSV------KLNSCFMGVSKLKSIGWCRPSG-LGPNCGS 54
Query: 260 RTTCWFRFGKNGVDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLEQN 439
RTTCWF F +N AE AG+YGSQ+RDDFDRDDVEQYFNYMGMLAVEG+YDKMEALL QN
Sbjct: 55 RTTCWFNFRQN---AETAGVYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQN 111
Query: 440 IHPVDILLLMAASEGDKPKIEELLRAGADYTVKDAQGRTALDRAATDEIKDFILGFSVQK 619
IHPVDILLLMA++EGD PKIEELLRAGADYTVKDA GRTALDRAA DE+KDFI+ + QK
Sbjct: 112 IHPVDILLLMASTEGDLPKIEELLRAGADYTVKDADGRTALDRAANDEVKDFIVNYKAQK 171
Query: 620 A 622
A
Sbjct: 172 A 172
>ref|XP_006406371.1| hypothetical protein EUTSA_v10021639mg [Eutrema salsugineum]
gi|557107517|gb|ESQ47824.1| hypothetical protein
EUTSA_v10021639mg [Eutrema salsugineum]
Length = 174
Score = 231 bits (589), Expect = 2e-58
Identities = 123/181 (67%), Positives = 142/181 (78%)
Frame = +2
Query: 80 AMASTVPSTLQPKFSLKPNPSTSIRPPVTILPKLNSEFLGSIRNIGGCRSTRKLGPSCGS 259
+++ T PST + KP S+S + L+S FLG+ + +LGPS GS
Sbjct: 3 SISCTTPSTSLFCSTTKPINSSS-----SSQLSLSSRFLGT----RVVKLRIRLGPSYGS 53
Query: 260 RTTCWFRFGKNGVDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLEQN 439
R TCWF+FGKNGVDAE AGIYGSQ+RDDFDRDDVEQYFNYMGMLAVEG+YDKMEALL QN
Sbjct: 54 RATCWFKFGKNGVDAENAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLNQN 113
Query: 440 IHPVDILLLMAASEGDKPKIEELLRAGADYTVKDAQGRTALDRAATDEIKDFILGFSVQK 619
IHPVDILL++AASEGDKPKIEELLRAGADYTVKDA GRTALDRA+++EI+D ILG QK
Sbjct: 114 IHPVDILLMLAASEGDKPKIEELLRAGADYTVKDADGRTALDRASSEEIRDLILGSLTQK 173
Query: 620 A 622
A
Sbjct: 174 A 174
>ref|XP_002522996.1| conserved hypothetical protein [Ricinus communis]
gi|223537808|gb|EEF39426.1| conserved hypothetical
protein [Ricinus communis]
Length = 175
Score = 231 bits (589), Expect = 2e-58
Identities = 121/179 (67%), Positives = 140/179 (78%)
Frame = +2
Query: 86 ASTVPSTLQPKFSLKPNPSTSIRPPVTILPKLNSEFLGSIRNIGGCRSTRKLGPSCGSRT 265
A T+P T +P+ + T LP ++ FLG+ + R R +GPS GSR
Sbjct: 11 AHTLPITCKPQKT------------ATFLPNFSTPFLGTKSKVCLVRPCR-IGPSNGSRV 57
Query: 266 TCWFRFGKNGVDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLEQNIH 445
CWF+FGKNGVDAEGAGIYGSQ+RDDFDRDDVEQYFNYMGMLAVEG+YDKMEALL Q+IH
Sbjct: 58 KCWFKFGKNGVDAEGAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQDIH 117
Query: 446 PVDILLLMAASEGDKPKIEELLRAGADYTVKDAQGRTALDRAATDEIKDFILGFSVQKA 622
PVDILL++AASEGDKPKIEELLRAGA Y VKDA GRTALDR A +EI++FI+GFSVQKA
Sbjct: 118 PVDILLMLAASEGDKPKIEELLRAGASYNVKDADGRTALDR-ANEEIREFIVGFSVQKA 175
>ref|XP_006305698.1| hypothetical protein CARUB_v10010432mg [Capsella rubella]
gi|482574409|gb|EOA38596.1| hypothetical protein
CARUB_v10010432mg [Capsella rubella]
Length = 177
Score = 230 bits (587), Expect = 4e-58
Identities = 120/171 (70%), Positives = 140/171 (81%), Gaps = 3/171 (1%)
Frame = +2
Query: 119 FSLKPNPSTSI--RPPVTILPKL-NSEFLGSIRNIGGCRSTRKLGPSCGSRTTCWFRFGK 289
FS P+ +TS+ + P+L +S FLG+ RN+ +LGPS GSRTTCWF+FGK
Sbjct: 8 FSCAPSLATSLFSTSNTSSSPRLLSSRFLGT-RNLKLHIRPARLGPSNGSRTTCWFKFGK 66
Query: 290 NGVDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLEQNIHPVDILLLM 469
NGVDAE AGIYGSQ+RDDFDRDDVEQYFNYMGMLAVEG+Y KMEALL NIHPVDILLL+
Sbjct: 67 NGVDAENAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYSKMEALLNLNIHPVDILLLL 126
Query: 470 AASEGDKPKIEELLRAGADYTVKDAQGRTALDRAATDEIKDFILGFSVQKA 622
AA+EGDKPKIEELLRAGADY+VKD GRTALDRA+++EI+D ILG+ QKA
Sbjct: 127 AATEGDKPKIEELLRAGADYSVKDGDGRTALDRASSEEIRDLILGYKAQKA 177
>gb|ESW18409.1| hypothetical protein PHAVU_006G038600g [Phaseolus vulgaris]
Length = 172
Score = 230 bits (586), Expect = 5e-58
Identities = 118/166 (71%), Positives = 135/166 (81%), Gaps = 10/166 (6%)
Frame = +2
Query: 155 PPVTILPKLN----------SEFLGSIRNIGGCRSTRKLGPSCGSRTTCWFRFGKNGVDA 304
PP+T KLN S FLG+ +++G T ++GPS GS+ TCWFRFGKNGVDA
Sbjct: 10 PPIT--SKLNNFLPSPHVSASRFLGTQKSVGWLSLTSRIGPSNGSKATCWFRFGKNGVDA 67
Query: 305 EGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLEQNIHPVDILLLMAASEG 484
+GAGIYGSQARDDFDRDDVEQYFNYMGMLAV+G+YD+MEALL IHPVDILLL+AASEG
Sbjct: 68 QGAGIYGSQARDDFDRDDVEQYFNYMGMLAVDGTYDRMEALLSLKIHPVDILLLLAASEG 127
Query: 485 DKPKIEELLRAGADYTVKDAQGRTALDRAATDEIKDFILGFSVQKA 622
DKPKIEELL+AGA Y VKD +GRTALDR A +EIKDFIL FSVQ+A
Sbjct: 128 DKPKIEELLKAGAKYDVKDGEGRTALDR-ANEEIKDFILNFSVQRA 172