BLASTX nr result
ID: Rehmannia26_contig00006014
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00006014
(1007 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ14823.1| hypothetical protein PRUPE_ppa002096mg [Prunus pe... 231 3e-58
gb|EXB36065.1| RNA-binding motif protein, X chromosome [Morus no... 225 2e-56
gb|ESW18634.1| hypothetical protein PHAVU_006G057100g [Phaseolus... 225 2e-56
ref|XP_004516101.1| PREDICTED: cleavage and polyadenylation spec... 224 5e-56
ref|XP_002522751.1| RNA-binding protein, putative [Ricinus commu... 223 9e-56
ref|XP_006586581.1| PREDICTED: cleavage and polyadenylation spec... 221 3e-55
ref|XP_003551440.1| PREDICTED: cleavage and polyadenylation spec... 221 3e-55
ref|XP_003532176.1| PREDICTED: cleavage and polyadenylation spec... 220 6e-55
ref|XP_004516100.1| PREDICTED: uncharacterized PE-PGRS family pr... 219 1e-54
ref|XP_003551437.1| PREDICTED: cleavage and polyadenylation spec... 217 7e-54
ref|XP_004244045.1| PREDICTED: uncharacterized protein LOC101251... 214 6e-53
gb|EOY12029.1| RNA-binding family protein isoform 1 [Theobroma c... 213 7e-53
gb|ESW18631.1| hypothetical protein PHAVU_006G057000g [Phaseolus... 210 8e-52
ref|XP_006346135.1| PREDICTED: cleavage and polyadenylation spec... 209 1e-51
ref|XP_004244046.1| PREDICTED: uncharacterized protein LOC101251... 209 2e-51
ref|XP_006401427.1| hypothetical protein EUTSA_v10012809mg [Eutr... 199 2e-48
ref|XP_004293188.1| PREDICTED: uncharacterized protein LOC101300... 199 2e-48
ref|NP_200378.1| RNA recognition motif-containing protein [Arabi... 193 8e-47
ref|XP_002866107.1| hypothetical protein ARALYDRAFT_495654 [Arab... 193 8e-47
dbj|BAE99617.1| hypothetical protein [Arabidopsis thaliana] 193 8e-47
>gb|EMJ14823.1| hypothetical protein PRUPE_ppa002096mg [Prunus persica]
Length = 717
Score = 231 bits (590), Expect = 3e-58
Identities = 130/244 (53%), Positives = 138/244 (56%), Gaps = 6/244 (2%)
Frame = -3
Query: 1005 SFGPVGNVGLPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXXXXXMWSDPNMGGWGGDEH 826
SF PVG VGLPGVAPHVNPAFF MWSDPNMGGW G+EH
Sbjct: 474 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPNMGGWAGEEH 533
Query: 825 GG-RAGESSYGEEAASDHLDGEGSQERGP-WPNAFKEKDRGSERDWSGSSDRRYKDDRGA 652
GG RAGESSYGEEAASDH GE S +RG WPNA KEKDRGSERDWSGSSDRRY+DDR
Sbjct: 534 GGGRAGESSYGEEAASDHQYGEVSHDRGGGWPNATKEKDRGSERDWSGSSDRRYRDDRDQ 593
Query: 651 GYERDAPREKDVGRDSDWSERRNRDDKDVG----XXXXXXXXXXXXXXXXXXXXXXXXXX 484
GY+RD PREKDV D DWSERR RDD D
Sbjct: 594 GYDRDVPREKDVAHDHDWSERRYRDDGDASRERDRERDRGRERSRDRDRDRDRERERDRD 653
Query: 483 XXXXXXXXXXXXXXXXXREAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXXRDADYGKRRR 304
RE E++DEW+RGRSSRTH K RDADYGKRRR
Sbjct: 654 RYREDRDKYTDHHKYRDREPEHEDEWERGRSSRTHSKARVSQEDNRRSRSRDADYGKRRR 713
Query: 303 LTSD 292
LTS+
Sbjct: 714 LTSE 717
>gb|EXB36065.1| RNA-binding motif protein, X chromosome [Morus notabilis]
Length = 687
Score = 225 bits (573), Expect = 2e-56
Identities = 127/241 (52%), Positives = 141/241 (58%), Gaps = 3/241 (1%)
Frame = -3
Query: 1005 SFGPVGNVGLPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXXXXXM-WSDPNMGGWGGDE 829
SF PVG VGLPGVAPHVNPAFF WSDP+MGGWGG+E
Sbjct: 449 SFPPVGGVGLPGVAPHVNPAFFGRGGMPMNGMGMMPTTGVDGPNMGMWSDPSMGGWGGEE 508
Query: 828 HGG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSGSSDRRYKDDRGA 652
HGG RAGESSYGEEAASDH GE S +RG WPNA KEKDRGSERDWSGSSDRRY+DDR
Sbjct: 509 HGGGRAGESSYGEEAASDHQYGEVSHDRGGWPNAMKEKDRGSERDWSGSSDRRYRDDRDQ 568
Query: 651 GYERDAPREKDVGRDSDWSERRNRDDKDVG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXX 475
++RD PREKD G + +W ERR+RDD++VG
Sbjct: 569 AFDRDMPREKDTGHE-EWPERRHRDDREVGRERDRERDRERERSRDRERDRDRDRDRHRG 627
Query: 474 XXXXXXXXXXXXXXREAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXXRDADYGKRRRLTS 295
REAE+DDEW+RGRSSRTH K RDADYGKRRRLTS
Sbjct: 628 EDRDRYADHHRYRDREAEHDDEWERGRSSRTH-KGRVSQEDDHRSRSRDADYGKRRRLTS 686
Query: 294 D 292
+
Sbjct: 687 E 687
>gb|ESW18634.1| hypothetical protein PHAVU_006G057100g [Phaseolus vulgaris]
Length = 691
Score = 225 bits (573), Expect = 2e-56
Identities = 125/239 (52%), Positives = 139/239 (58%), Gaps = 1/239 (0%)
Frame = -3
Query: 1005 SFGPVGNVGLPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXXXXXMWSDPNMGGWGGDEH 826
SF VG VGLPGVAPHVNPAFF MWSDPNMGGWGG+E
Sbjct: 460 SFPGVGGVGLPGVAPHVNPAFFGRGMPVNGMGMMPTSGMDGPNMGMWSDPNMGGWGGEEP 519
Query: 825 GG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSGSSDRRYKDDRGAG 649
GG +AGESSYGEEAASDH GE S +R WP +EKDRGSERDWSGSS+RRY+DDR G
Sbjct: 520 GGGKAGESSYGEEAASDHQYGEVSHDRAGWP--MREKDRGSERDWSGSSERRYRDDRDQG 577
Query: 648 YERDAPREKDVGRDSDWSERRNRDDKDVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 469
YERDAPREK++G D +WSERR+RDD++
Sbjct: 578 YERDAPREKEMGHDPEWSERRHRDDRET-----VRERSRDRERSRDRERDHRERDRHRED 632
Query: 468 XXXXXXXXXXXXREAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXXRDADYGKRRRLTSD 292
REAE+DDEWDRGRSSRTH K RDADYGKRRRLTS+
Sbjct: 633 RDRYADHHRYRDREAEHDDEWDRGRSSRTHSKPRISQEEEHHSRPRDADYGKRRRLTSE 691
>ref|XP_004516101.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Cicer arietinum]
gi|502177700|ref|XP_004516102.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X2 [Cicer arietinum]
Length = 670
Score = 224 bits (570), Expect = 5e-56
Identities = 120/234 (51%), Positives = 136/234 (58%), Gaps = 3/234 (1%)
Frame = -3
Query: 984 VGLPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXXXXXMWSDPNMGGWGGDEHGG-RAGE 808
VG+PGV+PHVNPAFF MW DPNMGGWGG+EHGG +A E
Sbjct: 437 VGMPGVSPHVNPAFFGRGMPMNGMGMMPPSGMDGPNMGMWPDPNMGGWGGEEHGGGKAAE 496
Query: 807 SSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSGSSDRRYKDDRGAGYERDAPR 628
SSYGEEAASDH GE SQ+R WPNA +EKDRGSERDWSGSS+RR+KDDR GYERD PR
Sbjct: 497 SSYGEEAASDHQYGEESQDRAGWPNAMREKDRGSERDWSGSSERRFKDDRDQGYERDVPR 556
Query: 627 EKDVGRDSDWSERRNRDDKDV--GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 454
EKD G D +WSERR+RDD++V G
Sbjct: 557 EKDAGHDQEWSERRSRDDREVGRGRSRDRDRARSRDQDRDRERDRDRDRDRHREDRDKYA 616
Query: 453 XXXXXXXREAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXXRDADYGKRRRLTSD 292
REAE+DDE +RGRSSRTH K +DADYGKRRRLTS+
Sbjct: 617 DHHRYKDREAEHDDERERGRSSRTHSKSRLASHEEEHHSRKDADYGKRRRLTSE 670
>ref|XP_002522751.1| RNA-binding protein, putative [Ricinus communis]
gi|223537989|gb|EEF39602.1| RNA-binding protein, putative
[Ricinus communis]
Length = 702
Score = 223 bits (568), Expect = 9e-56
Identities = 127/246 (51%), Positives = 140/246 (56%), Gaps = 8/246 (3%)
Frame = -3
Query: 1005 SFGPVGNVGLPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXXXXXMWSDPNMGGWGGDEH 826
SF PVG VGLPGVAPHVNPAFF MWSDP+MGGWG ++H
Sbjct: 460 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTTGVDGPNMGMWSDPSMGGWGVEDH 519
Query: 825 GG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSGSSDRRYKDDRGAG 649
GG RAGESSYGEEAASDH GE S +RG W N KEKDR SERDWSGSSDRRY+DDR AG
Sbjct: 520 GGGRAGESSYGEEAASDHQYGEVSHDRGGWQNTMKEKDRASERDWSGSSDRRYRDDREAG 579
Query: 648 YERDAPREKDV-GRDSDWSERRNRDDKDVG------XXXXXXXXXXXXXXXXXXXXXXXX 490
Y+RD PREKD+ G D DW ERR+R+D+DVG
Sbjct: 580 YDRDMPREKDMGGHDHDWPERRHREDRDVGRERDRERERDRERSRDRERERERDRDRDRD 639
Query: 489 XXXXXXXXXXXXXXXXXXXREAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXXRDADYGKR 310
RE E+DD+WDRGRSSRTH K RDADYGKR
Sbjct: 640 HDRYREDRDRYADNHRYRDREVEHDDDWDRGRSSRTHTK---SRLSQERSRSRDADYGKR 696
Query: 309 RRLTSD 292
RRLTS+
Sbjct: 697 RRLTSE 702
>ref|XP_006586581.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like [Glycine max]
Length = 659
Score = 221 bits (563), Expect = 3e-55
Identities = 122/240 (50%), Positives = 139/240 (57%), Gaps = 2/240 (0%)
Frame = -3
Query: 1005 SFGPVGNVGLPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXXXXXMWSDPNMGGWGGDEH 826
SF VG VGLPGVAPHVNPAFF MWSDPNMGGWGG+E
Sbjct: 422 SFPGVGGVGLPGVAPHVNPAFFGRGMPVNGMGMMPGSGMDGPNMGMWSDPNMGGWGGEEP 481
Query: 825 GG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSGSSDRRYKDDRGAG 649
GG +AGESSYGEEAASDH GE S +R WP +EKDRGSERDWSG+S+RRY+DDR G
Sbjct: 482 GGGKAGESSYGEEAASDHQYGEVSHDRAGWP--MREKDRGSERDWSGTSERRYRDDRDQG 539
Query: 648 YERDAPREKDVGRDSDWSERRNRDDKDVG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 472
YERDAP+E+D+G D +WSERR+RDD++ G
Sbjct: 540 YERDAPKEEDMGHDHEWSERRHRDDRETGRERSRDRDRERSRDRDRDRERDHRERDRHRE 599
Query: 471 XXXXXXXXXXXXXREAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXXRDADYGKRRRLTSD 292
REAE+DDEW+RGRSSR H K RDADYGKRRRLTS+
Sbjct: 600 DRDKYADHHRYRDREAEHDDEWERGRSSRMHSKSRLSQEEEHHSRPRDADYGKRRRLTSE 659
>ref|XP_003551440.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like [Glycine max]
Length = 696
Score = 221 bits (563), Expect = 3e-55
Identities = 124/240 (51%), Positives = 138/240 (57%), Gaps = 2/240 (0%)
Frame = -3
Query: 1005 SFGPVGNVGLPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXXXXXMWSDPNMGGWGGDEH 826
SF VG VGLPGVAPHVNPAFF MWSDPNMGGWGG+E
Sbjct: 459 SFPGVGGVGLPGVAPHVNPAFFGRGMPVNGMGMMPGSVMDGPNMGMWSDPNMGGWGGEEP 518
Query: 825 GG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSGSSDRRYKDDRGAG 649
GG +AGESSYGEEAASD GE S +R WP +EKDRGSERDWSGSS+RRY+DDR G
Sbjct: 519 GGGKAGESSYGEEAASDQQYGEVSHDRAGWP--MREKDRGSERDWSGSSERRYRDDRDQG 576
Query: 648 YERDAPREKDVGRDSDWSERRNRDDKDVG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 472
YERDA REKD+G D +WSERR+RDD++ G
Sbjct: 577 YERDASREKDMGHDHEWSERRHRDDRETGRERSRDRERSRDRDRDRDREKDLRERDRHRE 636
Query: 471 XXXXXXXXXXXXXREAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXXRDADYGKRRRLTSD 292
REAE+DDEW+RGRSSRTH K RDADYGKRRRLTS+
Sbjct: 637 DRDGYADHHRFRDREAEHDDEWERGRSSRTHSKSRLSQEEEHHSRPRDADYGKRRRLTSE 696
>ref|XP_003532176.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like [Glycine max]
Length = 693
Score = 220 bits (561), Expect = 6e-55
Identities = 121/240 (50%), Positives = 139/240 (57%), Gaps = 2/240 (0%)
Frame = -3
Query: 1005 SFGPVGNVGLPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXXXXXMWSDPNMGGWGGDEH 826
SF VG VGLPGVAPHVNPAFF MWSDPNMGGWGG+E
Sbjct: 456 SFPGVGGVGLPGVAPHVNPAFFGRGMPVNGMGMMPGSGMDGPNMGMWSDPNMGGWGGEEP 515
Query: 825 GG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSGSSDRRYKDDRGAG 649
GG +AGESSYGEEAASDH GE S +R WP +EKDRGSERDWSG+S+RRY+DDR G
Sbjct: 516 GGGKAGESSYGEEAASDHQYGEVSHDRAGWP--MREKDRGSERDWSGTSERRYRDDRDQG 573
Query: 648 YERDAPREKDVGRDSDWSERRNRDDKDVG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 472
Y+RDAP+EKD+G D +WSERR+RDD++ G
Sbjct: 574 YDRDAPKEKDMGHDHEWSERRHRDDRETGRERSRDRDRERSRDRDRDRERDYRERDRHKE 633
Query: 471 XXXXXXXXXXXXXREAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXXRDADYGKRRRLTSD 292
REAE+DDEW+RGRSS+ H K RDADYGKRRRLTS+
Sbjct: 634 DRDRYADHHRYRDREAEHDDEWERGRSSKPHSKSQLSQEEEHHSRPRDADYGKRRRLTSE 693
>ref|XP_004516100.1| PREDICTED: uncharacterized PE-PGRS family protein PE_PGRS54-like
[Cicer arietinum]
Length = 710
Score = 219 bits (558), Expect = 1e-54
Identities = 121/243 (49%), Positives = 138/243 (56%), Gaps = 5/243 (2%)
Frame = -3
Query: 1005 SFGPVGNVGLPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXXXXXMWSDPNMGGWGGDEH 826
SF VG VGLPGVAPHVNPAFF MW DPNMGGWGG+E
Sbjct: 468 SFPGVGGVGLPGVAPHVNPAFFGRGMPVNGMGMMPTAGMDGPNMGMWPDPNMGGWGGEEP 527
Query: 825 GG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSGSSDRRYKDDRGAG 649
GG RAGESSYGEEAASD GE S +R W NA ++KDRGSERDWSGSS+RRY+DDR G
Sbjct: 528 GGGRAGESSYGEEAASDQQYGEVSHDRPGWQNAMRDKDRGSERDWSGSSERRYRDDRDQG 587
Query: 648 YERDAPREKDVGRDSDWSERRNRDDKDV----GXXXXXXXXXXXXXXXXXXXXXXXXXXX 481
YERDAPR+KD G D ++SER++RDD++V
Sbjct: 588 YERDAPRDKDAGHDPEYSERKHRDDREVVRERSRDRDRDREKSRDRDRERERDRDRERDR 647
Query: 480 XXXXXXXXXXXXXXXXREAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXXRDADYGKRRRL 301
REAE+DDEW+RGRSSRTH K +DADYGKRRRL
Sbjct: 648 YREDRDRYADHHRYRDREAEHDDEWERGRSSRTHSKSRLSQDEEHHSRSKDADYGKRRRL 707
Query: 300 TSD 292
TS+
Sbjct: 708 TSE 710
>ref|XP_003551437.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Glycine max]
gi|571543924|ref|XP_006602132.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X2 [Glycine max] gi|571543928|ref|XP_006602133.1|
PREDICTED: cleavage and polyadenylation specificity
factor subunit CG7185-like isoform X3 [Glycine max]
Length = 698
Score = 217 bits (552), Expect = 7e-54
Identities = 123/242 (50%), Positives = 137/242 (56%), Gaps = 4/242 (1%)
Frame = -3
Query: 1005 SFGPVGNVGLPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXXXXXMWSDPNMGGWGGDEH 826
SF VG VGLPGVAPHVNPAFF MWSDPNMGGWGG+E
Sbjct: 459 SFPGVGGVGLPGVAPHVNPAFFGRGMPVNGMGMMPGSVMDGPNMGMWSDPNMGGWGGEEP 518
Query: 825 GG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSGSSDRRYKDDRGAG 649
GG +AGESSYGEEAASD GE S +R WP +EKDRGSERDWSGSS+RRY+DDR G
Sbjct: 519 GGGKAGESSYGEEAASDQQYGEVSHDRAGWP--MREKDRGSERDWSGSSERRYRDDRDQG 576
Query: 648 YERDAPREKDVGRDSDWSERRNRDDKDVG---XXXXXXXXXXXXXXXXXXXXXXXXXXXX 478
YERDA REKD+G D +WSERR+RDD++ G
Sbjct: 577 YERDASREKDMGHDHEWSERRHRDDRETGRERSRDRDRDRERSRDRDRDREKDHRERDRH 636
Query: 477 XXXXXXXXXXXXXXXREAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXXRDADYGKRRRLT 298
REAE+DDEW+RGRSSRTH K RDADY KRRRLT
Sbjct: 637 REDRERYADHHRYRDREAEHDDEWERGRSSRTHSKSRLSQEEEHHSRPRDADYVKRRRLT 696
Query: 297 SD 292
S+
Sbjct: 697 SE 698
>ref|XP_004244045.1| PREDICTED: uncharacterized protein LOC101251491 [Solanum
lycopersicum]
Length = 697
Score = 214 bits (544), Expect = 6e-53
Identities = 115/238 (48%), Positives = 130/238 (54%)
Frame = -3
Query: 1005 SFGPVGNVGLPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXXXXXMWSDPNMGGWGGDEH 826
SF PVG VG+PGVAPHVNPAFF MWS+PN GGW GDEH
Sbjct: 461 SFPPVGGVGMPGVAPHVNPAFFGRGMPMNGMGMMPGAGMEGPNMGMWSEPNAGGWAGDEH 520
Query: 825 GGRAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSGSSDRRYKDDRGAGY 646
GGRAGESSY EEA SDH GE + +RG WPN KEKDRGSERDWSGS+DR++++ R Y
Sbjct: 521 GGRAGESSYAEEAGSDHQYGETTHDRGAWPNNVKEKDRGSERDWSGSTDRKHREGREPSY 580
Query: 645 ERDAPREKDVGRDSDWSERRNRDDKDVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 466
+RD REKD G D DW E+R RDD+DV
Sbjct: 581 DRDMAREKDRGHDQDWPEKRYRDDRDVARDRERDRDHERPRERGRDRERDRDRDRHRDDR 640
Query: 465 XXXXXXXXXXXREAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXXRDADYGKRRRLTSD 292
RE EYDDE DRGRSSR H K RDADYGKR+R+TS+
Sbjct: 641 DRYADHHRYKDREQEYDDE-DRGRSSRGHSKSRLSHEEDHRSRSRDADYGKRQRITSE 697
>gb|EOY12029.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508720133|gb|EOY12030.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508720134|gb|EOY12031.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 709
Score = 213 bits (543), Expect = 7e-53
Identities = 119/242 (49%), Positives = 131/242 (54%), Gaps = 4/242 (1%)
Frame = -3
Query: 1005 SFGPVGNVGLPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXXXXXMWSDPNMGGWGGDEH 826
SF PVG VGLPGVAPHVNPAFF MWSDPNMGGWGGDEH
Sbjct: 468 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPNMGGWGGDEH 527
Query: 825 GG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSGSSDRRYKDDRGAG 649
GG RAGESSYGEEAASDH GE S +RG W N KEKDR SERDWSGSS+RRY+DDR G
Sbjct: 528 GGGRAGESSYGEEAASDHQYGEVSHDRGGWQNPTKEKDRASERDWSGSSERRYRDDREPG 587
Query: 648 YERDAPREKDVGRDSDWSERRNRDDKDVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 469
Y++D PREKD+G + DW ERR RDD+D+
Sbjct: 588 YDKDMPREKDMGLEHDWPERRQRDDRDIVRERDRERDRDRERSRDHVRDRDRERDRDRDK 647
Query: 468 XXXXXXXXXXXXREAEYD---DEWDRGRSSRTHGKXXXXXXXXXXXXXRDADYGKRRRLT 298
D + D GRSSRTH + RDADYGKRRRLT
Sbjct: 648 DRYREDRDRYADHHRYRDRDPEHDDHGRSSRTHNRSRLSQEEEHRSRSRDADYGKRRRLT 707
Query: 297 SD 292
S+
Sbjct: 708 SE 709
>gb|ESW18631.1| hypothetical protein PHAVU_006G057000g [Phaseolus vulgaris]
Length = 687
Score = 210 bits (534), Expect = 8e-52
Identities = 123/251 (49%), Positives = 138/251 (54%), Gaps = 13/251 (5%)
Frame = -3
Query: 1005 SFGPVGNVGLPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXXXXXMWSDPNMGGWGGDEH 826
SF VG VGLPGVAPHVNPAFF MWSDPNMGGWGG+E
Sbjct: 442 SFPGVGGVGLPGVAPHVNPAFFGRGMPVNGMGMMPTSGMDGPNMGMWSDPNMGGWGGEEP 501
Query: 825 GG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSGSSDRRYKDDRGAG 649
GG +AGESSYGEEAASDH GE S +R WP +EKDRGSERDWSGSS+RRY+DDR G
Sbjct: 502 GGGKAGESSYGEEAASDHQYGEVSHDRAGWP--MREKDRGSERDWSGSSERRYRDDRDQG 559
Query: 648 YERDAPREKDVGRDSDWSER-----------RNRD-DKDVGXXXXXXXXXXXXXXXXXXX 505
YERDAPREK++G D +WSER R+RD D++
Sbjct: 560 YERDAPREKEMGHDPEWSERRHRDDRETVRERSRDRDRE---RSRDRDRERSRDRDRDRE 616
Query: 504 XXXXXXXXXXXXXXXXXXXXXXXXREAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXXRDA 325
EAE+DDEW+RGRSSRTH K RDA
Sbjct: 617 RDHRERDRHREDRDRYADHHRYRDGEAEHDDEWERGRSSRTHSKSRLSQEEEHHSRPRDA 676
Query: 324 DYGKRRRLTSD 292
DYGKRRRLTS+
Sbjct: 677 DYGKRRRLTSE 687
>ref|XP_006346135.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like isoform X1 [Solanum tuberosum]
gi|565358644|ref|XP_006346136.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 6-like isoform
X2 [Solanum tuberosum] gi|565358646|ref|XP_006346137.1|
PREDICTED: cleavage and polyadenylation specificity
factor subunit 6-like isoform X3 [Solanum tuberosum]
Length = 695
Score = 209 bits (533), Expect = 1e-51
Identities = 115/238 (48%), Positives = 130/238 (54%)
Frame = -3
Query: 1005 SFGPVGNVGLPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXXXXXMWSDPNMGGWGGDEH 826
SF PVG VG+PGVAPHVNPAFF MWS+PN GGW GDEH
Sbjct: 461 SFPPVGGVGMPGVAPHVNPAFFGRGMPMNGMGMMPGAGMEGPNMGMWSEPNAGGWAGDEH 520
Query: 825 GGRAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSGSSDRRYKDDRGAGY 646
GGRAGESSY EEA SDH GE + +RG WPN KEKDRGSERDWSGS++R++++ R Y
Sbjct: 521 GGRAGESSYAEEAGSDHQYGETTHDRGAWPNNVKEKDRGSERDWSGSTERKHREGREPSY 580
Query: 645 ERDAPREKDVGRDSDWSERRNRDDKDVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 466
+RD REKD G D DW E+R RDD+DV
Sbjct: 581 DRDMAREKDRGHDQDWPEKRYRDDRDVA--RDREKDRDHERSRERGRDRERDRDRHRDDR 638
Query: 465 XXXXXXXXXXXREAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXXRDADYGKRRRLTSD 292
RE EYDDE DRGRSSR H K RDADYGKRRR+TS+
Sbjct: 639 DRYADHHRYKDREQEYDDE-DRGRSSRGHSKSRLSHEEDHRSRSRDADYGKRRRITSE 695
>ref|XP_004244046.1| PREDICTED: uncharacterized protein LOC101251795 [Solanum
lycopersicum]
Length = 695
Score = 209 bits (531), Expect = 2e-51
Identities = 115/238 (48%), Positives = 129/238 (54%)
Frame = -3
Query: 1005 SFGPVGNVGLPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXXXXXMWSDPNMGGWGGDEH 826
SF PVG VG+PGVAPHVNPAFF MWS+PN GGW GDEH
Sbjct: 461 SFPPVGGVGMPGVAPHVNPAFFGRGMPMNGMGMMPGAGMEGPNMGMWSEPNAGGWAGDEH 520
Query: 825 GGRAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSGSSDRRYKDDRGAGY 646
GGRAGESSY EEA SDH GE + +RG WPN KEKDRGSERDWSGS+DR++++ R Y
Sbjct: 521 GGRAGESSYAEEAGSDHQYGETTHDRGAWPNNVKEKDRGSERDWSGSTDRKHREGREPSY 580
Query: 645 ERDAPREKDVGRDSDWSERRNRDDKDVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 466
+RD REKD G D DW E+R RDD+DV
Sbjct: 581 DRDMAREKDRGHDQDWPEKRYRDDRDVA--RDRERDRDHERPRERGRDRERDRDRHRDDR 638
Query: 465 XXXXXXXXXXXREAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXXRDADYGKRRRLTSD 292
RE EYDDE DRGRSSR H K RDADYGKRRR+ S+
Sbjct: 639 DRYADHHRYKDREQEYDDE-DRGRSSRGHSKSRLSHEEDHRSRSRDADYGKRRRIMSE 695
>ref|XP_006401427.1| hypothetical protein EUTSA_v10012809mg [Eutrema salsugineum]
gi|557102517|gb|ESQ42880.1| hypothetical protein
EUTSA_v10012809mg [Eutrema salsugineum]
Length = 712
Score = 199 bits (505), Expect = 2e-48
Identities = 114/242 (47%), Positives = 127/242 (52%), Gaps = 4/242 (1%)
Frame = -3
Query: 1005 SFGPVGNVGLPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXXXXXMWSDPNMGGWGGDEH 826
SF PVG VGLPGVAPHVNPAFF DPN GGWGG E
Sbjct: 471 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPNAGVDGGHNMGMWDPNSGGWGGGED 530
Query: 825 --GGRAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSGSSDRRYKDDRGA 652
GGRA ESSYGEEAASDH GE + +RG PN KEKDR SER+WSGSSDRR ++D+
Sbjct: 531 LGGGRAAESSYGEEAASDHQYGEVNHDRGARPNPVKEKDRASEREWSGSSDRRNREDKDV 590
Query: 651 GYERDAPREKDVGRDSDWSERRNRDDKDVG--XXXXXXXXXXXXXXXXXXXXXXXXXXXX 478
GYERD PREKDVG D ERR+RDD++ G
Sbjct: 591 GYERDIPREKDVGHGYDLPERRHRDDRETGREREREHHHKERERSRDRDRERDRERDRHR 650
Query: 477 XXXXXXXXXXXXXXXREAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXXRDADYGKRRRLT 298
E E+DDEW+RGRSSR H K RDADYGKRRRLT
Sbjct: 651 EERDRYGGDHRSRHRDEPEHDDEWNRGRSSRGHSKSRLSREDNHRSRSRDADYGKRRRLT 710
Query: 297 SD 292
++
Sbjct: 711 TE 712
>ref|XP_004293188.1| PREDICTED: uncharacterized protein LOC101300984 [Fragaria vesca
subsp. vesca]
Length = 672
Score = 199 bits (505), Expect = 2e-48
Identities = 117/247 (47%), Positives = 132/247 (53%), Gaps = 9/247 (3%)
Frame = -3
Query: 1005 SFGPVGNVGLPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXXXXXMWSDPNMGG-WGGDE 829
SF PVG VGLPGVAPHVNPAFF W DP+MGG W G+E
Sbjct: 429 SFPPVGGVGLPGVAPHVNPAFFGRMPMSGMGMMPTSGVDGPNMGM-WPDPSMGGGWPGEE 487
Query: 828 HGG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSGSSDRRYKDDRGA 652
HGG RAGESSYGEEA SDH GE S +RG W N KEKDRGSERDWSGSSDRRY++DR
Sbjct: 488 HGGGRAGESSYGEEAGSDHQYGEASHDRGGWQNTMKEKDRGSERDWSGSSDRRYREDRDQ 547
Query: 651 GYERDAPREKDVGRDSDWSERRNRDDKDVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 472
G++RD PREKDVG D +W+ERR+R+D DV
Sbjct: 548 GFDRDMPREKDVGHDHEWTERRHRNDVDVN--RERDRERDRERDRGRERSRDHDRERYRE 605
Query: 471 XXXXXXXXXXXXXREAEYDDEWDRGRSSRTHGK-------XXXXXXXXXXXXXRDADYGK 313
RE + DE +RGRS+RTH K RD DYGK
Sbjct: 606 DRERYADHHKYRDREMVHQDETERGRSTRTHSKARLPEDDDRRSRSRDRRSRSRDVDYGK 665
Query: 312 RRRLTSD 292
RRRLTS+
Sbjct: 666 RRRLTSE 672
>ref|NP_200378.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9758601|dbj|BAB09234.1| unnamed protein product
[Arabidopsis thaliana] gi|332009282|gb|AED96665.1| RNA
recognition motif-containing protein [Arabidopsis
thaliana]
Length = 710
Score = 193 bits (491), Expect = 8e-47
Identities = 112/244 (45%), Positives = 125/244 (51%), Gaps = 6/244 (2%)
Frame = -3
Query: 1005 SFGPVGNVGLPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXXXXXMWSDPNMGGWGGDEH 826
SF PVG VGLPGVAPHVNPAFF DPN GGWG E
Sbjct: 467 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPNAGVDGGHNMGMWDPNSGGWGAGED 526
Query: 825 --GGRAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSGSSDRRYKDDRGA 652
GRA ESSYGEEAASDH GE + ERG PN KEK+R SER+WSGSSDRR ++D+ A
Sbjct: 527 LGSGRAAESSYGEEAASDHQYGEVNHERGARPNPVKEKERASEREWSGSSDRRNREDKDA 586
Query: 651 GYERDAPREKDVGRDSDWSERRNRDDKDVG----XXXXXXXXXXXXXXXXXXXXXXXXXX 484
GYERD PREKDVG D ERR+RDD+D G
Sbjct: 587 GYERDIPREKDVGHGYDMPERRHRDDRDTGREREREHHHKDRERSREHVRDRERERERDR 646
Query: 483 XXXXXXXXXXXXXXXXXREAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXXRDADYGKRRR 304
E E+D+EW+RGRSSR H K RD DYGKRRR
Sbjct: 647 HREERERYGGDHRTRHRDEPEHDEEWNRGRSSRGHNKSRLSREDNHRSKSRDTDYGKRRR 706
Query: 303 LTSD 292
LT++
Sbjct: 707 LTTE 710
>ref|XP_002866107.1| hypothetical protein ARALYDRAFT_495654 [Arabidopsis lyrata subsp.
lyrata] gi|297311942|gb|EFH42366.1| hypothetical protein
ARALYDRAFT_495654 [Arabidopsis lyrata subsp. lyrata]
Length = 706
Score = 193 bits (491), Expect = 8e-47
Identities = 112/244 (45%), Positives = 126/244 (51%), Gaps = 6/244 (2%)
Frame = -3
Query: 1005 SFGPVGNVGLPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXXXXXMWSDPNMGGWGGDEH 826
SF PVG VGLPGVAPHVNPAFF DPN GGWGG E
Sbjct: 463 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPNAGVDGGHNMGMWDPNSGGWGGGED 522
Query: 825 --GGRAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSGSSDRRYKDDRGA 652
GRA ESSYGEEAASDH GE + +RG PN KEK+R SER+WSGSSDRR ++D+ A
Sbjct: 523 LGSGRAAESSYGEEAASDHQYGEVNHDRGARPNPVKEKERVSEREWSGSSDRRNREDKDA 582
Query: 651 GYERDAPREKDVGRDSDWSERRNRDDKDVG----XXXXXXXXXXXXXXXXXXXXXXXXXX 484
GYERD PREKDVG D ERR+RDD+D G
Sbjct: 583 GYERDIPREKDVGHGYDMPERRHRDDRDTGREREREHHHKDRERSREHVRDRERDRERDR 642
Query: 483 XXXXXXXXXXXXXXXXXREAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXXRDADYGKRRR 304
E E+D+EW+RGRSSR H K RD DYGKRRR
Sbjct: 643 HREERERYGGDHRTRHRDEPEHDEEWNRGRSSRGHSKSRLSREDNHRSRSRDTDYGKRRR 702
Query: 303 LTSD 292
LT++
Sbjct: 703 LTTE 706
>dbj|BAE99617.1| hypothetical protein [Arabidopsis thaliana]
Length = 276
Score = 193 bits (491), Expect = 8e-47
Identities = 112/244 (45%), Positives = 125/244 (51%), Gaps = 6/244 (2%)
Frame = -3
Query: 1005 SFGPVGNVGLPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXXXXXMWSDPNMGGWGGDEH 826
SF PVG VGLPGVAPHVNPAFF DPN GGWG E
Sbjct: 33 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPNAGVDGGHNMGMWDPNSGGWGAGED 92
Query: 825 --GGRAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSGSSDRRYKDDRGA 652
GRA ESSYGEEAASDH GE + ERG PN KEK+R SER+WSGSSDRR ++D+ A
Sbjct: 93 LGSGRAAESSYGEEAASDHQYGEVNHERGARPNPVKEKERASEREWSGSSDRRNREDKDA 152
Query: 651 GYERDAPREKDVGRDSDWSERRNRDDKDVG----XXXXXXXXXXXXXXXXXXXXXXXXXX 484
GYERD PREKDVG D ERR+RDD+D G
Sbjct: 153 GYERDIPREKDVGHGYDMPERRHRDDRDTGREREREHHHKDRERSREHVRDRERERERDR 212
Query: 483 XXXXXXXXXXXXXXXXXREAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXXRDADYGKRRR 304
E E+D+EW+RGRSSR H K RD DYGKRRR
Sbjct: 213 HREERERYGGDHRTRHRDEPEHDEEWNRGRSSRGHNKSRLSREDNHRSKSRDTDYGKRRR 272
Query: 303 LTSD 292
LT++
Sbjct: 273 LTTE 276