BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00005616
         (2410 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   849   0.0  
gb|EPS73635.1| hypothetical protein M569_01118, partial [Genlise...   843   0.0  
ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   827   0.0  
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...   812   0.0  
ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   795   0.0  
ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [F...   801   0.0  
gb|EOX92637.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]       795   0.0  
ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Popu...   791   0.0  
ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   767   0.0  
ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   758   0.0  
gb|EOX92638.1| Topoisomerase 3alpha isoform 2, partial [Theobrom...   748   0.0  
ref|XP_006649448.1| PREDICTED: DNA topoisomerase 3-alpha-like [O...   729   0.0  
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric...   733   0.0  
ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   734   0.0  
ref|XP_006581778.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   734   0.0  
ref|NP_201197.1| topoisomerase 3alpha [Arabidopsis thaliana] gi|...   736   0.0  
ref|XP_003558748.1| PREDICTED: DNA topoisomerase 3-alpha [Brachy...   719   0.0  
ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arab...   734   0.0  
tpg|DAA43538.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea m...   708   0.0  
ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group] g...   706   0.0  

>ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum tuberosum]
          Length = 915

 Score =  849 bits (2193), Expect(2) = 0.0
 Identities = 414/560 (73%), Positives = 457/560 (81%), Gaps = 6/560 (1%)
 Frame = -1

Query: 1882 TIVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHH 1703
            T+VQEQ+GHPVWG YAQRLLDP++ LWRNP+GGGHDDKAHPPIHPTKFSAGE+ WS DHH
Sbjct: 360  TMVQEQEGHPVWGIYAQRLLDPQSGLWRNPSGGGHDDKAHPPIHPTKFSAGETRWSQDHH 419

Query: 1702 KVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMI 1523
            +VYELVVRHFLACVSQPA+GAET VEIDIAGE FSA GRVI+AKNYLDVYRFE+WGGS+I
Sbjct: 420  RVYELVVRHFLACVSQPAVGAETIVEIDIAGESFSACGRVILAKNYLDVYRFESWGGSVI 479

Query: 1522 PTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYA 1343
            PTY++GQQFTPTTLTLD+GVTRPPPLLSEADLL CMDKAGIGTDATMHDHIKKLLDRFYA
Sbjct: 480  PTYSFGQQFTPTTLTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFYA 539

Query: 1342 TKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQ 1163
             KDS+ RFSPTKLGEALVMGYDDMGYELWKPYLRAMME DMKAVS+GTKRKAEVLE CLQ
Sbjct: 540  IKDSNTRFSPTKLGEALVMGYDDMGYELWKPYLRAMMECDMKAVSIGTKRKAEVLETCLQ 599

Query: 1162 QMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPD 983
            QMKACF DAR NKGKL EAMA+FFERSNRS+  EQ A+G+VVR+CGLC ESDMVLR+KPD
Sbjct: 600  QMKACFSDARTNKGKLLEAMAIFFERSNRSSGGEQQAVGDVVRRCGLCLESDMVLRQKPD 659

Query: 982  GNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVN 803
            GNFMVGCLG+PQCRNVVWLPGSVSEA VT N C++CSPGPV+ IQFKFRRLEIPPNY+V 
Sbjct: 660  GNFMVGCLGYPQCRNVVWLPGSVSEASVTENTCTSCSPGPVFKIQFKFRRLEIPPNYSVQ 719

Query: 802  HLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAW----QT 635
            HLGCIGGCDDILRQLVE+CGTGSRNNS+                        +     QT
Sbjct: 720  HLGCIGGCDDILRQLVEICGTGSRNNSNTSGRGRGNPTASSSAQRGNSRAQSSCAYCRQT 779

Query: 634  GHSSGSYANAPESSRGRNSRSQEA--GESSIPCSSCGAPCNLRTANTPANRGRKFYSCQA 461
            GH S    +  ++SRGR +R+QE   GESSIPC+SCGAPC LRTANT  NRGRKF+SCQ+
Sbjct: 780  GHLSNDCPS--QASRGRTARAQEVDNGESSIPCNSCGAPCILRTANTANNRGRKFFSCQS 837

Query: 460  QGCNFFVWEDNASSGGTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXSFMSATGEPIS 281
            Q CNFFVWEDN  +GG   R +                           SF+SATGEPI+
Sbjct: 838  QECNFFVWEDNL-NGGRAERAN-TSASTSSGRGGRGRGRGQSGAHSSNVSFVSATGEPIT 895

Query: 280  GRCFVCGDPGHFANACPNRG 221
            GRCF+CGDPGHFAN CP RG
Sbjct: 896  GRCFICGDPGHFANVCPRRG 915



 Score =  310 bits (794), Expect(2) = 0.0
 Identities = 143/164 (87%), Positives = 154/164 (93%)
 Frame = -2

Query: 2409 VQHLVRPNQLFSDAVDARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQ 2230
            VQ LV+PNQLFSDAVD RQEIDLRIGASFTRFQTMLLR AFVLDFATD+ N++LSYGPCQ
Sbjct: 168  VQTLVQPNQLFSDAVDVRQEIDLRIGASFTRFQTMLLRGAFVLDFATDDRNIVLSYGPCQ 227

Query: 2229 FPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQ 2050
            FPTLGF+VER+WE+Q+HEPEEFWTINCTHNS+EGTATFNWMRGHLFDYTC   IYEMC+Q
Sbjct: 228  FPTLGFVVERYWEIQAHEPEEFWTINCTHNSDEGTATFNWMRGHLFDYTCGVTIYEMCIQ 287

Query: 2049 EPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK 1918
            EP ATVT V+QQEKLKYPPHPLSTIELEKRASRYFRMSSE TMK
Sbjct: 288  EPIATVTKVKQQEKLKYPPHPLSTIELEKRASRYFRMSSEQTMK 331


>gb|EPS73635.1| hypothetical protein M569_01118, partial [Genlisea aurea]
          Length = 813

 Score =  843 bits (2178), Expect(2) = 0.0
 Identities = 415/577 (71%), Positives = 448/577 (77%), Gaps = 24/577 (4%)
 Frame = -1

Query: 1882 TIVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHH 1703
            TIVQEQQGHP WGSYAQRLLDPE  LW+NP  GGHDDKAHPPIHPTKFS+GESGWS DHH
Sbjct: 259  TIVQEQQGHPAWGSYAQRLLDPETGLWKNPGAGGHDDKAHPPIHPTKFSSGESGWSQDHH 318

Query: 1702 KVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMI 1523
            KVYELVVRHFLACVSQPAIGAETTVEIDIA EQFSASGR IIAKNYLDVYRFE WGGS+I
Sbjct: 319  KVYELVVRHFLACVSQPAIGAETTVEIDIASEQFSASGRAIIAKNYLDVYRFEKWGGSLI 378

Query: 1522 PTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYA 1343
            P Y YGQQF PTTLTLD+GVTRPPPLLSEADLL CMDKAGIGTDATMHDHIKKLLDR YA
Sbjct: 379  PAYAYGQQFIPTTLTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRCYA 438

Query: 1342 TKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQ 1163
            TKDS+ RFSPTKLGEALVMGYDDMGYELWKP+LRAMMESDMK+VSMGTKRK EVLEACLQ
Sbjct: 439  TKDSNTRFSPTKLGEALVMGYDDMGYELWKPHLRAMMESDMKSVSMGTKRKGEVLEACLQ 498

Query: 1162 QMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPD 983
            QMKACF+DAR NK KLFEAM VFFERSNRS + +QH  G++VRKCGLCQESDMVLRKKPD
Sbjct: 499  QMKACFLDARANKEKLFEAMGVFFERSNRSQTADQHMSGDIVRKCGLCQESDMVLRKKPD 558

Query: 982  GNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVN 803
            GNFMVGCLG+PQCRNVVWLPGSVS A VTT +CSTCSPGPVY+IQFKFR+LEIPPNYNV+
Sbjct: 559  GNFMVGCLGYPQCRNVVWLPGSVSSASVTTVVCSTCSPGPVYMIQFKFRQLEIPPNYNVD 618

Query: 802  HLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSS 623
            HLGC+GGCD +LRQLVE+CGTGSR+NS+V                           G +S
Sbjct: 619  HLGCVGGCDSVLRQLVEICGTGSRSNSNVPGTG----------------------QGQTS 656

Query: 622  GSYANAPESSRGRNSRSQE---------------------AGESSIPCSSCGAPCNLRTA 506
             S  N P+    RN  +                       AGESS+PC SCGAPCNLRTA
Sbjct: 657  SSSFNHPQHGNLRNRGAAHPTTTGRSSARHPSPSSTTHVGAGESSVPCGSCGAPCNLRTA 716

Query: 505  NTPANRGRKFYSCQAQGCNFFVWEDNASSGGT---VPRGSIXXXXXXXXXXXXXXXXXXX 335
            NT ANRGR+FYSCQAQ CNFFVW+D+A SGG       G                     
Sbjct: 717  NTAANRGRQFYSCQAQSCNFFVWKDDAGSGGVRGGDGGGVSRRGGSSNQRGRGWGRRRHD 776

Query: 334  XXXXXXXSFMSATGEPISGRCFVCGDPGHFANACPNR 224
                   SF+SATGEP+SGRCF+CG+P HFAN CPNR
Sbjct: 777  EQRRATTSFVSATGEPVSGRCFLCGEPSHFANECPNR 813



 Score =  308 bits (789), Expect(2) = 0.0
 Identities = 141/164 (85%), Positives = 156/164 (95%)
 Frame = -2

Query: 2409 VQHLVRPNQLFSDAVDARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQ 2230
            +QHL+RPNQLF+DAVD RQEIDLRIGASFTRFQTMLL+DAF+LDF TD+ +V+LSYGPCQ
Sbjct: 67   MQHLIRPNQLFADAVDVRQEIDLRIGASFTRFQTMLLKDAFLLDFRTDDRSVVLSYGPCQ 126

Query: 2229 FPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQ 2050
            FPTLGF+VER+WE+QSHEPEEFW I CTH+SEEG  TFNWMRGHLFDYTCATI+YEMCVQ
Sbjct: 127  FPTLGFVVERYWEIQSHEPEEFWGIGCTHSSEEGVTTFNWMRGHLFDYTCATILYEMCVQ 186

Query: 2049 EPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK 1918
            EPTATVT+VRQQEKLKYPP+PLSTIELEKRASRYFRMSSE TMK
Sbjct: 187  EPTATVTSVRQQEKLKYPPYPLSTIELEKRASRYFRMSSEQTMK 230


>ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum lycopersicum]
          Length = 910

 Score =  827 bits (2137), Expect(2) = 0.0
 Identities = 406/556 (73%), Positives = 447/556 (80%), Gaps = 2/556 (0%)
 Frame = -1

Query: 1882 TIVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHH 1703
            T+VQEQ+GHPVWG+YAQRLLDP++ LWRNP+GGGHDDKAHPPIHPTKFSAGE+ WS DHH
Sbjct: 360  TMVQEQEGHPVWGTYAQRLLDPQSGLWRNPSGGGHDDKAHPPIHPTKFSAGETRWSQDHH 419

Query: 1702 KVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMI 1523
            +VYELVVRHFLACVSQPA+GAET VEIDIAGE FSA GRVI+AKNYLDVYRFE+WGGS+I
Sbjct: 420  RVYELVVRHFLACVSQPAVGAETIVEIDIAGESFSACGRVILAKNYLDVYRFESWGGSVI 479

Query: 1522 PTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYA 1343
            PTY++GQQFTPTTLTLD+GV RPPPLLSEADLL CMDKAGIGTDATMHDHIKKLLDRFYA
Sbjct: 480  PTYSFGQQFTPTTLTLDSGVIRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFYA 539

Query: 1342 TKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQ 1163
             KDS+ RFSPTKLGEALVMGYDDMGYELWKPYLRAMME DMKAVS GTKRKAEVLE CLQ
Sbjct: 540  IKDSNTRFSPTKLGEALVMGYDDMGYELWKPYLRAMMECDMKAVSTGTKRKAEVLETCLQ 599

Query: 1162 QMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPD 983
            QMKACF DAR NK KL EAMA+FFERSNRS+S EQ A+G VVR+CGLC ESDMVLR+KPD
Sbjct: 600  QMKACFSDARTNKEKLLEAMAIFFERSNRSSSGEQQAVGAVVRRCGLCLESDMVLRQKPD 659

Query: 982  GNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVN 803
            GNFMVGCLG+PQCRNVVWLPGSVSEA VT N C TCSPGPV+ IQFKFR+ EIPP+Y+V 
Sbjct: 660  GNFMVGCLGYPQCRNVVWLPGSVSEASVTENTCITCSPGPVFKIQFKFRQQEIPPDYSVQ 719

Query: 802  HLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSS 623
            HLGCIGGCDDILRQLVE+CGTGSRN+                            QTGH S
Sbjct: 720  HLGCIGGCDDILRQLVEICGTGSRNSRGRGNPTAFSSAQRDNSRAQSSCAYCR-QTGHLS 778

Query: 622  GSYANAPESSRGRNSRSQEA--GESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCN 449
                +  ++SR R +R+QE   GESS+PC+SCGAPC LRTANT  NRGRKF+SCQ+  CN
Sbjct: 779  NDCPS--QASRDRTARAQEVDNGESSMPCNSCGAPCILRTANTANNRGRKFFSCQSSECN 836

Query: 448  FFVWEDNASSGGTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXSFMSATGEPISGRCF 269
            FFVWEDN  SGG   R +                           SF+SATGEPI+ RCF
Sbjct: 837  FFVWEDNL-SGGRAERAN-TSASTSSGRGGRGRGRGQSGAHSSNVSFVSATGEPITVRCF 894

Query: 268  VCGDPGHFANACPNRG 221
            +CGDPGHFAN CP RG
Sbjct: 895  ICGDPGHFANVCPRRG 910



 Score =  310 bits (794), Expect(2) = 0.0
 Identities = 143/164 (87%), Positives = 155/164 (94%)
 Frame = -2

Query: 2409 VQHLVRPNQLFSDAVDARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQ 2230
            VQ LV+PNQLFSDAVD RQEIDLRIGASFTRFQTMLLR AFVLDFATD+ N++LSYGPCQ
Sbjct: 168  VQTLVQPNQLFSDAVDVRQEIDLRIGASFTRFQTMLLRGAFVLDFATDDRNLVLSYGPCQ 227

Query: 2229 FPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQ 2050
            FPTLGF+VER+WE+Q+HEPEEFWTINCTHNS+EGTATFNWMRGHLFDYTC  +IYEMC+Q
Sbjct: 228  FPTLGFVVERYWEIQAHEPEEFWTINCTHNSDEGTATFNWMRGHLFDYTCGVMIYEMCIQ 287

Query: 2049 EPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK 1918
            EP ATVT V+QQEKLKYPPHPLSTIELEKRASRYFRMSSE TMK
Sbjct: 288  EPIATVTKVKQQEKLKYPPHPLSTIELEKRASRYFRMSSEQTMK 331


>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score =  812 bits (2097), Expect(2) = 0.0
 Identities = 399/564 (70%), Positives = 444/564 (78%), Gaps = 11/564 (1%)
 Frame = -1

Query: 1879 IVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHK 1700
            IVQEQ GHP+WGSYAQRLLDP A LWRNP+ GGHDDKAHPPIHPTKFSAGESGWS DH +
Sbjct: 351  IVQEQLGHPIWGSYAQRLLDPGAGLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHQR 410

Query: 1699 VYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIP 1520
            +YELVVRHFLACVSQPA+GAET VEIDIAGE FS+SGRVIIAKNYLDVYRFE+WGGSMIP
Sbjct: 411  LYELVVRHFLACVSQPAVGAETIVEIDIAGESFSSSGRVIIAKNYLDVYRFESWGGSMIP 470

Query: 1519 TYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 1340
            TY +GQQF PTTLTLD+GVTRPPPLLSEADLL+CMDKAGIGTDATMHDHIKKLLDRFYAT
Sbjct: 471  TYVFGQQFIPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYAT 530

Query: 1339 KDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQ 1160
            KDS+ RFSPT LGEALVMGYDDMGYELWKPYLR+MME DMKAVS+GTKR+ EVL  CL+Q
Sbjct: 531  KDSNTRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTTCLEQ 590

Query: 1159 MKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDG 980
            MKACF+DARLNK KL EAMA+FFERSNRS+ +EQH +G+VVR+C LCQESDMVLR+KPDG
Sbjct: 591  MKACFLDARLNKVKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRRKPDG 650

Query: 979  NFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNH 800
            NFMVGCLG+PQCRNVVWLPGS+SEA +TT  C+ C+PGPVY IQFKFRRLEIPPNYN++H
Sbjct: 651  NFMVGCLGYPQCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNYNIDH 710

Query: 799  LGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSSG 620
            LGC+ GCD+ILRQL E+CGTGSR  S+                          QTGHSS 
Sbjct: 711  LGCVCGCDEILRQLTEICGTGSR-ISARGRGSNASSTNAQRSNTRQTACIHCSQTGHSSN 769

Query: 619  SYANAPESSRGRNSR--SQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCNF 446
               +    SR   S   +  +GESSIPC+ CG PC LRTANT  NRGRKFYSCQ+Q CNF
Sbjct: 770  DCPSRVPRSRNSQSHRTNMPSGESSIPCNVCGTPCILRTANTENNRGRKFYSCQSQECNF 829

Query: 445  FVWED--NASSGG------TVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXSFMSATGE 290
            FVWED  N+SSGG      T    +                           +F+SATG+
Sbjct: 830  FVWEDSLNSSSGGRSAQPATARSSASNPSRRGGRGRGDRGRGRQSGARTSDTTFVSATGD 889

Query: 289  PISG-RCFVCGDPGHFANACPNRG 221
            P+SG RCFVCGDP HFAN CPNRG
Sbjct: 890  PVSGRRCFVCGDPSHFANVCPNRG 913



 Score =  312 bits (800), Expect(2) = 0.0
 Identities = 143/164 (87%), Positives = 156/164 (95%)
 Frame = -2

Query: 2409 VQHLVRPNQLFSDAVDARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQ 2230
            VQ+LVRPNQLF+DAVD RQEIDLRIGASFTRFQTMLLRDAFVLDFA D+ N++LSYGPCQ
Sbjct: 158  VQNLVRPNQLFADAVDVRQEIDLRIGASFTRFQTMLLRDAFVLDFAADDRNLVLSYGPCQ 217

Query: 2229 FPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQ 2050
            FPTLGF+VER+WE+QSHEPEEFWTINC+H S+EGT+TFNWMR HLFDYTCA IIYEMC+Q
Sbjct: 218  FPTLGFVVERYWEIQSHEPEEFWTINCSHKSDEGTSTFNWMRAHLFDYTCAVIIYEMCIQ 277

Query: 2049 EPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK 1918
            EPTATVT VRQQEKLKYPPHPL+TIELEKRASRYF MSSEHTMK
Sbjct: 278  EPTATVTKVRQQEKLKYPPHPLNTIELEKRASRYFHMSSEHTMK 321


>ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cicer arietinum]
          Length = 920

 Score =  795 bits (2053), Expect(2) = 0.0
 Identities = 393/567 (69%), Positives = 440/567 (77%), Gaps = 14/567 (2%)
 Frame = -1

Query: 1879 IVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHK 1700
            IVQEQQGHP WG YAQRLLDPEA LWRNP GGGHDDKAHPPIHPTKFSAGESGWS DH K
Sbjct: 356  IVQEQQGHPQWGVYAQRLLDPEAGLWRNPRGGGHDDKAHPPIHPTKFSAGESGWSQDHRK 415

Query: 1699 VYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIP 1520
            +YELVVRHFLACVS+PA+GAETTVEIDIAGE FSA GRVI+ KNYLDVY++E+WGGS+IP
Sbjct: 416  LYELVVRHFLACVSKPAVGAETTVEIDIAGELFSACGRVILEKNYLDVYQYESWGGSIIP 475

Query: 1519 TYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 1340
            TY  GQQF PTTLTLD+GVTRPPP LSEADLLSCMDK GIGTDATMHDHIKKLLDRFYAT
Sbjct: 476  TYTIGQQFIPTTLTLDSGVTRPPPPLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYAT 535

Query: 1339 KDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQ 1160
            KD+SMRF+PT LGEALVMGYDDMGY+LWKPYLRA+ME DMK+VS GTK K EVL+  LQQ
Sbjct: 536  KDASMRFTPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKSVSEGTKSKTEVLDTSLQQ 595

Query: 1159 MKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDG 980
            MKACF+DARLNK KL EAM +FFERSNRS   EQ+AIGEVVR+CGLC+ESDMVL+K  DG
Sbjct: 596  MKACFLDARLNKVKLLEAMGIFFERSNRSGGEEQNAIGEVVRRCGLCRESDMVLKKSRDG 655

Query: 979  NFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNH 800
            NFMVGCLGFPQCRN VWLPGSVSEA+VTTN CS C+PGPVY IQFKFR+LEIPPNY+VNH
Sbjct: 656  NFMVGCLGFPQCRNAVWLPGSVSEAVVTTNTCSNCTPGPVYRIQFKFRQLEIPPNYDVNH 715

Query: 799  LGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSSG 620
            LGCIGGCD+IL QL E+CGTG R  +                           +TGHSS 
Sbjct: 716  LGCIGGCDEILTQLTEICGTGPRMPAR-PRGPTTSTGNAHHTNPRQAVCMNCQETGHSSN 774

Query: 619  SYANAPESSRGRNSR------SQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQ 458
               +  ++ R RN+R      +Q++GE+S+ C+SCG PC LRTANT  NRGRKFYSC +Q
Sbjct: 775  DCPS--QTLRSRNARQHGNVMNQQSGEASVSCNSCGTPCVLRTANTANNRGRKFYSCPSQ 832

Query: 457  GCNFFVWEDNASS---GGTVPRG----SIXXXXXXXXXXXXXXXXXXXXXXXXXXSFMSA 299
             CNFFVWED+ +S   GG+  R     +                           +F+SA
Sbjct: 833  ECNFFVWEDDLNSGTGGGSFTRSNSIPTSNRGRNGRNGGRGARGRGRNASSSSNVTFVSA 892

Query: 298  TGEPISG-RCFVCGDPGHFANACPNRG 221
            TG+PISG RCFVCGDP HFAN CPNRG
Sbjct: 893  TGDPISGRRCFVCGDPSHFANVCPNRG 919



 Score =  298 bits (763), Expect(2) = 0.0
 Identities = 135/164 (82%), Positives = 153/164 (93%)
 Frame = -2

Query: 2409 VQHLVRPNQLFSDAVDARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQ 2230
            VQ+LV PN+ F+DAVDARQEIDLRIGASFTRFQTML++DAF++D  TD+ N+ILSYGPCQ
Sbjct: 163  VQNLVEPNKWFADAVDARQEIDLRIGASFTRFQTMLMKDAFIIDTITDDRNIILSYGPCQ 222

Query: 2229 FPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQ 2050
            FPTLGF+VER+WE+Q+HEPEEFW+INC+H S+EG A F+W RGHLFDYTCA IIYEMC +
Sbjct: 223  FPTLGFVVERYWEIQAHEPEEFWSINCSHRSDEGVANFSWGRGHLFDYTCAVIIYEMCTE 282

Query: 2049 EPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK 1918
            EPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK
Sbjct: 283  EPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK 326


>ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [Fragaria vesca subsp.
            vesca]
          Length = 908

 Score =  801 bits (2068), Expect(2) = 0.0
 Identities = 390/559 (69%), Positives = 438/559 (78%), Gaps = 6/559 (1%)
 Frame = -1

Query: 1879 IVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHK 1700
            IVQEQQGHP WGSYAQRLLDP + LWRNP+ GGHDDKAHPPIHPTKFSAGES WS DH++
Sbjct: 352  IVQEQQGHPGWGSYAQRLLDPASGLWRNPSSGGHDDKAHPPIHPTKFSAGESNWSQDHNR 411

Query: 1699 VYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIP 1520
            +YELVVRHFLACVSQPA+GAETTVEIDIAGE FSASGRVI+AKNYLDVYRFE+WGGS++P
Sbjct: 412  LYELVVRHFLACVSQPAVGAETTVEIDIAGEMFSASGRVILAKNYLDVYRFESWGGSLLP 471

Query: 1519 TYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 1340
            TY  GQQF PTTLTLD+GVTRPPPLLSEADLL CMDK GIGTDATMHDHIKKLLDRFYAT
Sbjct: 472  TYAVGQQFMPTTLTLDSGVTRPPPLLSEADLLGCMDKEGIGTDATMHDHIKKLLDRFYAT 531

Query: 1339 KDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQ 1160
            KD++ RFSPT LGEALVMGYDDMGY+LWKPYLRA+ME DMKAVS G K KAEVLE CLQQ
Sbjct: 532  KDANTRFSPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKAVSEGNKSKAEVLETCLQQ 591

Query: 1159 MKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDG 980
            MK CF+DAR NK KLFEAMAVFFERSNR   ++QH  GE +R+CGLCQE+DMVLRK  DG
Sbjct: 592  MKGCFLDARQNKVKLFEAMAVFFERSNRPGGDDQHTSGEFIRRCGLCQEADMVLRKNRDG 651

Query: 979  NFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNH 800
            NFMVGC+G+PQCRN +WLPGSVSEA+ TTNIC++C+PGPV+LIQF FRRLEIPPNY+ NH
Sbjct: 652  NFMVGCMGYPQCRNAIWLPGSVSEAVATTNICNSCTPGPVHLIQFTFRRLEIPPNYSTNH 711

Query: 799  LGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSSG 620
            LGCIGGCD+ILRQL E+CGTGSR  S+                          Q+GHSSG
Sbjct: 712  LGCIGGCDEILRQLTEICGTGSR--SAARGRGPTTSSNVQQNNTRQGACIYCHQSGHSSG 769

Query: 619  ---SYANAPESSRGRNSRSQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCN 449
               S ++ P S R R   +Q +GE S+ C++CGAPC LRTANT  NRGRKFY C +Q CN
Sbjct: 770  DCPSQSSGPRSVRPRTMNAQ-SGEISVSCTTCGAPCVLRTANTTQNRGRKFYKCPSQECN 828

Query: 448  FFVWEDNASSG--GTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXSFMSATGEPISGR 275
            FFVWEDN S+G  G   + +                           +F+SATG+P SGR
Sbjct: 829  FFVWEDNVSNGNGGRGFQRANVSAGRGAGGRGSGGRGAQGAGHATGGTFVSATGDPNSGR 888

Query: 274  -CFVCGDPGHFANACPNRG 221
             CFVCGDP HFAN CPNRG
Sbjct: 889  RCFVCGDPSHFANVCPNRG 907



 Score =  291 bits (745), Expect(2) = 0.0
 Identities = 135/164 (82%), Positives = 151/164 (92%)
 Frame = -2

Query: 2409 VQHLVRPNQLFSDAVDARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQ 2230
            VQ+L   N+ F+DAVDARQEIDLRIGASFTRFQTMLLRDAFV+D ATD+ N++LSYGPCQ
Sbjct: 159  VQNLDNANKYFADAVDARQEIDLRIGASFTRFQTMLLRDAFVIDSATDDRNLVLSYGPCQ 218

Query: 2229 FPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQ 2050
            FPTLGFIVER+WE+QSHEPEEFWTINC+H S+EGTATF WMRGHLFD+ CA IIYEMCV+
Sbjct: 219  FPTLGFIVERYWEIQSHEPEEFWTINCSHRSDEGTATFGWMRGHLFDHACAVIIYEMCVE 278

Query: 2049 EPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK 1918
            +P ATVT VRQQEK KYPP+PL+TIELEKRASRYFRMSSEHTMK
Sbjct: 279  DPIATVTKVRQQEKPKYPPYPLNTIELEKRASRYFRMSSEHTMK 322


>gb|EOX92637.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]
          Length = 914

 Score =  795 bits (2052), Expect(2) = 0.0
 Identities = 391/560 (69%), Positives = 431/560 (76%), Gaps = 7/560 (1%)
 Frame = -1

Query: 1879 IVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHK 1700
            IVQEQQ HP WGSYAQRLLDP  SLWRNP+ GGHDDKAHPPIHPTKFSAGE  WS DH K
Sbjct: 355  IVQEQQDHPEWGSYAQRLLDPGTSLWRNPSSGGHDDKAHPPIHPTKFSAGEHNWSQDHRK 414

Query: 1699 VYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIP 1520
            +YELVVRHFLACVSQPA+GAETTVEIDIA EQFS SGRVI+ +NYLDVYR+E+WGGSMIP
Sbjct: 415  LYELVVRHFLACVSQPAVGAETTVEIDIADEQFSTSGRVILERNYLDVYRYESWGGSMIP 474

Query: 1519 TYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 1340
            TY  GQQF PT+LTLD GVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT
Sbjct: 475  TYTLGQQFIPTSLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 534

Query: 1339 KDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQ 1160
            KDS+ RFSPTKLGEALVMGYDDMGYELWKP LR+MME DMK VS+G KRK EVL  CLQQ
Sbjct: 535  KDSNTRFSPTKLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKRKDEVLATCLQQ 594

Query: 1159 MKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDG 980
            MKACF+DARLNK KL EAMAVFFERSN+S  ++ H  GEVVR+CGLC+ES MVL+K  DG
Sbjct: 595  MKACFLDARLNKVKLLEAMAVFFERSNQSAGDDNHVAGEVVRQCGLCRESSMVLKKNRDG 654

Query: 979  NFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNH 800
            NFMVGCLGFPQCRN +WLPGSV EA VT+NIC +C+PGPVYLIQFKFR+LEIPP +N NH
Sbjct: 655  NFMVGCLGFPQCRNAIWLPGSVLEAAVTSNICGSCNPGPVYLIQFKFRQLEIPPGFNANH 714

Query: 799  LGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSSG 620
            LGCIGGCDDILRQL+E+CGTGSR  S+                          QTGHSS 
Sbjct: 715  LGCIGGCDDILRQLIEICGTGSR-MSARGRGPTTTSSNVQRNSSRQGACLYCQQTGHSSN 773

Query: 619  SYANAPESSRGRNSR-SQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCNFF 443
               +    SR   SR S + GE S+ CS+CG PC LRTANT  NRGRKFYSC +Q CNFF
Sbjct: 774  DCPSQFSGSRNSRSRTSSQNGEPSVSCSTCGTPCVLRTANTANNRGRKFYSCPSQECNFF 833

Query: 442  VWED---NASSGGTVPRGSI--XXXXXXXXXXXXXXXXXXXXXXXXXXSFMSATGEPISG 278
            +WED   N + G ++PR  I                            +F+SATG+PISG
Sbjct: 834  IWEDEHNNGTGGRSIPRAGINGSASNSSRGGGRGRGRFGQNGARAADVTFVSATGDPISG 893

Query: 277  -RCFVCGDPGHFANACPNRG 221
             RC+VCGDP HFAN CPNRG
Sbjct: 894  RRCYVCGDPSHFANVCPNRG 913



 Score =  296 bits (758), Expect(2) = 0.0
 Identities = 137/163 (84%), Positives = 150/163 (92%)
 Frame = -2

Query: 2406 QHLVRPNQLFSDAVDARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQF 2227
            Q+LV PN  FSDAVDARQEIDLRIGASFTRFQTM+LRD FV+D ATD+ N++LSYGPCQF
Sbjct: 163  QNLVDPNPWFSDAVDARQEIDLRIGASFTRFQTMMLRDKFVIDSATDDRNLVLSYGPCQF 222

Query: 2226 PTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQE 2047
            PTLGF+VER+WEVQSHEPEEFWTINC+H  +EG ATFNWMRGHLFD+TCA I+YEMCVQE
Sbjct: 223  PTLGFVVERYWEVQSHEPEEFWTINCSHKLDEGVATFNWMRGHLFDHTCAVIVYEMCVQE 282

Query: 2046 PTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK 1918
            P ATVT VR QEKLKYPP+PLSTIELEKRASRYFRMSSEHTMK
Sbjct: 283  PNATVTKVRHQEKLKYPPYPLSTIELEKRASRYFRMSSEHTMK 325


>ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Populus trichocarpa]
            gi|222856496|gb|EEE94043.1| hypothetical protein
            POPTR_0005s06810g [Populus trichocarpa]
          Length = 910

 Score =  791 bits (2042), Expect(2) = 0.0
 Identities = 385/560 (68%), Positives = 435/560 (77%), Gaps = 6/560 (1%)
 Frame = -1

Query: 1882 TIVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHH 1703
            TIVQE Q HPVWGSYAQRLLDP A LWRNP+ GGHDDKAHPPIHPTKFSAGES WS DHH
Sbjct: 351  TIVQEHQEHPVWGSYAQRLLDPGAGLWRNPSNGGHDDKAHPPIHPTKFSAGESRWSQDHH 410

Query: 1702 KVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMI 1523
            ++YELVVRHFLACVSQPA+GAET VEIDIAGE+FSASGRVI+AKNYLDVYRFE+WG SMI
Sbjct: 411  RLYELVVRHFLACVSQPAVGAETVVEIDIAGERFSASGRVILAKNYLDVYRFESWGDSMI 470

Query: 1522 PTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYA 1343
            PTY  GQQF P TLTLD+GVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFY 
Sbjct: 471  PTYLQGQQFIPATLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYV 530

Query: 1342 TKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQ 1163
            TKD++ RFSPT LGEALVMGYDDMGYELWKP LR++ME DMK VS+G K KAEVL  CLQ
Sbjct: 531  TKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRSLMECDMKEVSVGNKSKAEVLATCLQ 590

Query: 1162 QMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPD 983
            QMKACF+DA++NK KL EAMA+FF RS+RSN ++  A+GE VR CGLCQE++MVL+K  D
Sbjct: 591  QMKACFLDAKVNKVKLLEAMAIFFNRSDRSNGDDSSALGENVRPCGLCQEANMVLKKNRD 650

Query: 982  GNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVN 803
            GNFMVGC GFPQCRN VWLPG V EA +T NIC++C+PGPVYLIQFKFR+LEIPP +NVN
Sbjct: 651  GNFMVGCSGFPQCRNAVWLPGPVLEATITNNICNSCTPGPVYLIQFKFRQLEIPPGFNVN 710

Query: 802  HLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSS 623
            HLGCIGGCD+ LRQL+E+CGTGSR                             +QTGH+S
Sbjct: 711  HLGCIGGCDETLRQLIEICGTGSRVQGG-NGPPTTTPSNPQRSNSRQAPCIYCYQTGHAS 769

Query: 622  GSYANAPESSRGRNSR--SQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCN 449
                +   ++R   S   +Q+ GESSIPCS+CG PC LRTANT  NRGRKFYSC +Q CN
Sbjct: 770  TDCPSRISATRHVQSHGMNQQNGESSIPCSTCGTPCVLRTANTANNRGRKFYSCSSQACN 829

Query: 448  FFVWEDNASSGG---TVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXSFMSATGEPISG 278
            FFVWEDN ++G    + PR ++                          +F+SATGEPISG
Sbjct: 830  FFVWEDNLNNGSAPRSAPRPNMSNSASNPSRRGGRGRGVQNAGRAADVTFVSATGEPISG 889

Query: 277  -RCFVCGDPGHFANACPNRG 221
             RCFVCGDP HFANACP+RG
Sbjct: 890  RRCFVCGDPSHFANACPSRG 909



 Score =  286 bits (732), Expect(2) = 0.0
 Identities = 134/164 (81%), Positives = 150/164 (91%), Gaps = 1/164 (0%)
 Frame = -2

Query: 2406 QHLVRPNQLFSDAVDARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQF 2227
            Q+L+ PNQ FSDAVDARQEIDLRIGASFTRFQTMLLRD FV+D A D+ N++LSYGPCQF
Sbjct: 159  QNLIAPNQWFSDAVDARQEIDLRIGASFTRFQTMLLRDRFVIDSAQDDRNLVLSYGPCQF 218

Query: 2226 PTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQE 2047
            PTLGF+VER+WE+QSHEPEEFWTINCTH S+EG A+FNWMRGHLFDYT + I+YEMCV+E
Sbjct: 219  PTLGFVVERYWEIQSHEPEEFWTINCTHRSDEGLASFNWMRGHLFDYTSSVILYEMCVEE 278

Query: 2046 PTATVTN-VRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK 1918
            PTATV+N   QQEKLKYPP+PLSTIELEKRASRYFRMSSE TMK
Sbjct: 279  PTATVSNRNHQQEKLKYPPYPLSTIELEKRASRYFRMSSEQTMK 322


>ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cucumis sativus]
          Length = 925

 Score =  767 bits (1980), Expect(2) = 0.0
 Identities = 381/574 (66%), Positives = 432/574 (75%), Gaps = 21/574 (3%)
 Frame = -1

Query: 1879 IVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHK 1700
            IV+EQQ H +WG+YAQRLLDPE+ LWRNP+GGGHDDKAHPPIHPTKFSAGE GWS DHH+
Sbjct: 357  IVREQQEHQIWGAYAQRLLDPESRLWRNPSGGGHDDKAHPPIHPTKFSAGERGWSQDHHR 416

Query: 1699 VYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRV-IIAKNYLDVYRFETWGGSMI 1523
            +YELVVRHFLACVSQPA+GA TTVEIDIAGE FS S R   I +NYLDVYRFE+WGGS I
Sbjct: 417  LYELVVRHFLACVSQPAVGAVTTVEIDIAGELFSTSKRANSILRNYLDVYRFESWGGSTI 476

Query: 1522 PTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYA 1343
            PTY  GQQF PTTLTLD+GVTRPPPLLSEADLLSCMDK GIGTDATMHDHIKKLLDRFYA
Sbjct: 477  PTYVSGQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYA 536

Query: 1342 TKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQ 1163
            TKD++ RF+PT LGEALVMGYDDMGY LWKP LRA+ME +MKAVS GTKRK EVL +CLQ
Sbjct: 537  TKDANTRFTPTNLGEALVMGYDDMGYNLWKPNLRAIMEHEMKAVSEGTKRKDEVLASCLQ 596

Query: 1162 QMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPD 983
            QMK CF+DAR+NK KL EAM VFFERSN S  +E  A+GEVV+ CGLCQ+SDMVL++  D
Sbjct: 597  QMKTCFLDARVNKQKLLEAMEVFFERSNGSGGDENRAVGEVVQLCGLCQDSDMVLKRNRD 656

Query: 982  GNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVN 803
            GN+MVGCLGFPQCRNVVWLPGS++EA VT++ C+ C+PGPVYLIQFKFR+LEIPPNYN N
Sbjct: 657  GNYMVGCLGFPQCRNVVWLPGSIAEATVTSDRCTLCTPGPVYLIQFKFRQLEIPPNYNAN 716

Query: 802  HLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSS 623
            HLGC+GGCDDILRQL E+CGTGSR ++                           Q GHSS
Sbjct: 717  HLGCVGGCDDILRQLTEICGTGSRVSA---RGRGTSSSNVQRDNPGQSVCIFCQQVGHSS 773

Query: 622  GSYANAPESSRG-RNSRSQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCNF 446
                + P  S G R+++ +++GESS+ CSSCG+PC LRTANT  NRGRKFY CQ+Q CNF
Sbjct: 774  N---DCPSQSVGSRSAQRRQSGESSVSCSSCGSPCVLRTANTANNRGRKFYKCQSQECNF 830

Query: 445  FVWEDNASSG--------------GTVPR----GSIXXXXXXXXXXXXXXXXXXXXXXXX 320
            FVWEDN  +G              G+ P     G                          
Sbjct: 831  FVWEDNVDNGNGGNSVQRSNVRSSGSAPSNLNPGQNTGRGRGRGRGRGRDRDRDRGQGQI 890

Query: 319  XXSFMSATGEPISG-RCFVCGDPGHFANACPNRG 221
              +F+SATGEPIS  RCFVCGDP HFAN CPNRG
Sbjct: 891  AATFVSATGEPISDRRCFVCGDPSHFANVCPNRG 924



 Score =  289 bits (739), Expect(2) = 0.0
 Identities = 130/164 (79%), Positives = 152/164 (92%)
 Frame = -2

Query: 2409 VQHLVRPNQLFSDAVDARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQ 2230
            VQ+LV+PN+ F+DAVDARQEIDLRIGASFTRFQT+LL+DAF +D  TD+ N++LSYGPCQ
Sbjct: 164  VQNLVQPNKWFADAVDARQEIDLRIGASFTRFQTLLLKDAFNIDSVTDDRNIVLSYGPCQ 223

Query: 2229 FPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQ 2050
            FPTLGF+VER+WE+QSHEPEEFWTINC+HNS++G +TF+W RG+LFDYTCA + YEMCVQ
Sbjct: 224  FPTLGFVVERYWEIQSHEPEEFWTINCSHNSDDGISTFSWTRGNLFDYTCAVVFYEMCVQ 283

Query: 2049 EPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK 1918
            E TATV NVR+QE LKYPPHPL+TIELEKRASRYFRMSSEHTMK
Sbjct: 284  ESTATVVNVRRQETLKYPPHPLNTIELEKRASRYFRMSSEHTMK 327


>ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [Citrus sinensis]
          Length = 940

 Score =  758 bits (1958), Expect(2) = 0.0
 Identities = 374/557 (67%), Positives = 424/557 (76%), Gaps = 4/557 (0%)
 Frame = -1

Query: 1879 IVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHK 1700
            IVQEQ GHP WG YAQRLLD  A LWRNP  GGHDDKAHPPIHPTKFS+GES WS DH+K
Sbjct: 387  IVQEQIGHPDWGPYAQRLLDHAAGLWRNPGSGGHDDKAHPPIHPTKFSSGESRWSQDHYK 446

Query: 1699 VYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIP 1520
            +YELVVRHFLACVSQPA+GAET VEI+IAGE FS SGRVI+AKNYLDVYRFE+WGG +IP
Sbjct: 447  LYELVVRHFLACVSQPAVGAETIVEINIAGEVFSTSGRVILAKNYLDVYRFESWGGLVIP 506

Query: 1519 TYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 1340
            TY +GQQF PTTLTLD+GVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYA 
Sbjct: 507  TYVHGQQFIPTTLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAI 566

Query: 1339 KDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQ 1160
            KD++ RF+PT +GEALVMGYDDMGYELWKP LR+MMESDMK VS+G K KA+VL  CLQQ
Sbjct: 567  KDANTRFAPTNIGEALVMGYDDMGYELWKPNLRSMMESDMKEVSVGNKSKADVLANCLQQ 626

Query: 1159 MKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDG 980
            MKACF+DARL K KL EAM +FFE   RS   +Q A GEVVR+CG+CQES+MVL+K  DG
Sbjct: 627  MKACFLDARLKKVKLLEAMGIFFE---RSGGEDQQAAGEVVRQCGICQESNMVLKKSRDG 683

Query: 979  NFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNH 800
            N MVGCL FPQCRN VWLPGSVSEA VTTN C++C+PGPVYLIQFKFR+ EIPP +NVNH
Sbjct: 684  NLMVGCLAFPQCRNAVWLPGSVSEAAVTTNTCNSCTPGPVYLIQFKFRQHEIPPGFNVNH 743

Query: 799  LGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSSG 620
            LGCIGGCD+ LRQL+E+CGTGSR  +                           Q GHSS 
Sbjct: 744  LGCIGGCDETLRQLIEICGTGSRIPAR-GRGPTASSNNGQQSNHRQRACIYCQQMGHSSS 802

Query: 619  SYANAPESSRG--RNSRSQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCNF 446
               +    SR    N  + ++GESSI C++CG PC LRTANT  NRGRKFYSC +Q CNF
Sbjct: 803  DCPSQFSGSRNARANGMNPQSGESSIQCTTCGTPCVLRTANTANNRGRKFYSCSSQECNF 862

Query: 445  FVWEDNASSG-GTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXSFMSATGEPISG-RC 272
            FVWED+A +G   +P+  +                          +F+SATG+PISG RC
Sbjct: 863  FVWEDDAKNGTRRMPQAGVSGSASNPSQRGGRGRGGQSRGHNTGMTFVSATGDPISGRRC 922

Query: 271  FVCGDPGHFANACPNRG 221
            +VCG+P HFANACPNRG
Sbjct: 923  YVCGEPSHFANACPNRG 939



 Score =  289 bits (740), Expect(2) = 0.0
 Identities = 137/164 (83%), Positives = 152/164 (92%)
 Frame = -2

Query: 2409 VQHLVRPNQLFSDAVDARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQ 2230
            VQ+LV PNQ F+DAVDARQEIDLRIGASFTRFQTMLL++ F +D  TD+ N++LSYGPCQ
Sbjct: 195  VQNLVDPNQWFADAVDARQEIDLRIGASFTRFQTMLLKN-FHIDSVTDDRNLVLSYGPCQ 253

Query: 2229 FPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQ 2050
            FPTLGF+VER+WE+Q+HE EEFWTINC+H SEEGTATF+WMRGHLFDYT A IIYEMCVQ
Sbjct: 254  FPTLGFVVERYWEIQAHESEEFWTINCSHKSEEGTATFSWMRGHLFDYTSAVIIYEMCVQ 313

Query: 2049 EPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK 1918
            EPTATVT VRQQEKLKYPP+PLSTIELEKRASRYFRMSSEHTMK
Sbjct: 314  EPTATVTKVRQQEKLKYPPYPLSTIELEKRASRYFRMSSEHTMK 357


>gb|EOX92638.1| Topoisomerase 3alpha isoform 2, partial [Theobroma cacao]
          Length = 845

 Score =  748 bits (1931), Expect(2) = 0.0
 Identities = 361/492 (73%), Positives = 396/492 (80%), Gaps = 4/492 (0%)
 Frame = -1

Query: 1879 IVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHK 1700
            IVQEQQ HP WGSYAQRLLDP  SLWRNP+ GGHDDKAHPPIHPTKFSAGE  WS DH K
Sbjct: 355  IVQEQQDHPEWGSYAQRLLDPGTSLWRNPSSGGHDDKAHPPIHPTKFSAGEHNWSQDHRK 414

Query: 1699 VYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIP 1520
            +YELVVRHFLACVSQPA+GAETTVEIDIA EQFS SGRVI+ +NYLDVYR+E+WGGSMIP
Sbjct: 415  LYELVVRHFLACVSQPAVGAETTVEIDIADEQFSTSGRVILERNYLDVYRYESWGGSMIP 474

Query: 1519 TYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 1340
            TY  GQQF PT+LTLD GVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT
Sbjct: 475  TYTLGQQFIPTSLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 534

Query: 1339 KDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQ 1160
            KDS+ RFSPTKLGEALVMGYDDMGYELWKP LR+MME DMK VS+G KRK EVL  CLQQ
Sbjct: 535  KDSNTRFSPTKLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKRKDEVLATCLQQ 594

Query: 1159 MKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDG 980
            MKACF+DARLNK KL EAMAVFFERSN+S  ++ H  GEVVR+CGLC+ES MVL+K  DG
Sbjct: 595  MKACFLDARLNKVKLLEAMAVFFERSNQSAGDDNHVAGEVVRQCGLCRESSMVLKKNRDG 654

Query: 979  NFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNH 800
            NFMVGCLGFPQCRN +WLPGSV EA VT+NIC +C+PGPVYLIQFKFR+LEIPP +N NH
Sbjct: 655  NFMVGCLGFPQCRNAIWLPGSVLEAAVTSNICGSCNPGPVYLIQFKFRQLEIPPGFNANH 714

Query: 799  LGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSSG 620
            LGCIGGCDDILRQL+E+CGTGSR  S+                          QTGHSS 
Sbjct: 715  LGCIGGCDDILRQLIEICGTGSR-MSARGRGPTTTSSNVQRNSSRQGACLYCQQTGHSSN 773

Query: 619  SYANAPESSRGRNSRSQE----AGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGC 452
               +    SR   SR+       GE S+ CS+CG PC LRTANT  NRGRKFYSC +Q C
Sbjct: 774  DCPSQFSGSRNSRSRTSSQNGMQGEPSVSCSTCGTPCVLRTANTANNRGRKFYSCPSQEC 833

Query: 451  NFFVWEDNASSG 416
            NFF+WED  ++G
Sbjct: 834  NFFIWEDEHNNG 845



 Score =  296 bits (758), Expect(2) = 0.0
 Identities = 137/163 (84%), Positives = 150/163 (92%)
 Frame = -2

Query: 2406 QHLVRPNQLFSDAVDARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQF 2227
            Q+LV PN  FSDAVDARQEIDLRIGASFTRFQTM+LRD FV+D ATD+ N++LSYGPCQF
Sbjct: 163  QNLVDPNPWFSDAVDARQEIDLRIGASFTRFQTMMLRDKFVIDSATDDRNLVLSYGPCQF 222

Query: 2226 PTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQE 2047
            PTLGF+VER+WEVQSHEPEEFWTINC+H  +EG ATFNWMRGHLFD+TCA I+YEMCVQE
Sbjct: 223  PTLGFVVERYWEVQSHEPEEFWTINCSHKLDEGVATFNWMRGHLFDHTCAVIVYEMCVQE 282

Query: 2046 PTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK 1918
            P ATVT VR QEKLKYPP+PLSTIELEKRASRYFRMSSEHTMK
Sbjct: 283  PNATVTKVRHQEKLKYPPYPLSTIELEKRASRYFRMSSEHTMK 325


>ref|XP_006649448.1| PREDICTED: DNA topoisomerase 3-alpha-like [Oryza brachyantha]
          Length = 923

 Score =  729 bits (1881), Expect(2) = 0.0
 Identities = 355/570 (62%), Positives = 418/570 (73%), Gaps = 15/570 (2%)
 Frame = -1

Query: 1882 TIVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHH 1703
            +IVQEQ  HPVWG+YAQRLLDPEA LWRNP+ GGHDDKAHPPIHPTKFSAGE+ WS +H 
Sbjct: 360  SIVQEQTAHPVWGTYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGETNWSDNHK 419

Query: 1702 KVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMI 1523
            K+YELVVRHFLAC SQPA+GAETTVEIDIAGEQF+ASGRV+++KNYLDVYRF++WGG+++
Sbjct: 420  KLYELVVRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVVLSKNYLDVYRFDSWGGTLL 479

Query: 1522 PTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYA 1343
            PTY  GQQF PTTLTLD+GVTRPPPLL+EADLLSCMDKAGIGTDATMHDHIKKLLDR YA
Sbjct: 480  PTYTIGQQFIPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHDHIKKLLDRCYA 539

Query: 1342 TKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQ 1163
            TKD++ RFSPT LGEALVMGYD+MGYELWKPYLR+MME+DMK+VS+GTK KAEVLE CLQ
Sbjct: 540  TKDANTRFSPTNLGEALVMGYDEMGYELWKPYLRSMMEADMKSVSIGTKSKAEVLENCLQ 599

Query: 1162 QMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPD 983
            QMKACF+DAR NK KLF+AM  FF RS+R  +  Q++I E VR C  C ES+MVL+++P 
Sbjct: 600  QMKACFLDARANKVKLFDAMGAFFARSSRPINETQNSI-EAVRPCAACNESEMVLKRRPT 658

Query: 982  GNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVN 803
            G FMVGC GFPQCRNVVWLPGS+SEA VT  +C TC+PGPVY IQFKFRR +IPP+++V+
Sbjct: 659  GEFMVGCRGFPQCRNVVWLPGSLSEASVTDQVCPTCAPGPVYKIQFKFRRRDIPPSFDVD 718

Query: 802  HLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQ----- 638
            HLGCIGGCDDIL++L E+   GS N ++                         ++     
Sbjct: 719  HLGCIGGCDDILKELTEISRFGSHNQTATPARNQSQNPSGARQGAPRQDLHTDFRPARQF 778

Query: 637  -TGHSSGSYANAPESSRGRNSRSQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQA 461
              GH+       P+  R  ++ S       + C+SCG PC LRTANT ANRGRKFY CQ 
Sbjct: 779  TNGHTP---VVNPQGFRSTHTGSSGNASGQVQCTSCGEPCILRTANTEANRGRKFYKCQD 835

Query: 460  QGCNFFVWEDNASSGGTVPRG---------SIXXXXXXXXXXXXXXXXXXXXXXXXXXSF 308
              C FF WED+  +  +VPRG                                      F
Sbjct: 836  PACGFFAWEDDVQN--SVPRGRGRGGRSGSRQASASAGRRGGSQARGRRGRGRNADGMMF 893

Query: 307  MSATGEPISGRCFVCGDPGHFANACPNRGR 218
            ++ATGEP+ G CFVCGDP HFANACP+RGR
Sbjct: 894  VAATGEPVHGSCFVCGDPTHFANACPSRGR 923



 Score =  294 bits (752), Expect(2) = 0.0
 Identities = 137/164 (83%), Positives = 151/164 (92%)
 Frame = -2

Query: 2409 VQHLVRPNQLFSDAVDARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQ 2230
            VQHL RPN+LF+DAVDARQEIDLRIGASFTRFQTMLLRDAFVLD   D  N+ILSYGPCQ
Sbjct: 168  VQHLDRPNKLFADAVDARQEIDLRIGASFTRFQTMLLRDAFVLDDTGDERNMILSYGPCQ 227

Query: 2229 FPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQ 2050
            FPTLGFIVERFWE+Q+HEPEEFWTINC+H S+EGTA+F W+RGHLFDY+ A +IYEMCV+
Sbjct: 228  FPTLGFIVERFWEIQAHEPEEFWTINCSHTSDEGTASFGWIRGHLFDYSSAVVIYEMCVE 287

Query: 2049 EPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK 1918
            EP ATV NVR QEKLKYPP+PLSTIEL+KRASRYFRMSSEHTMK
Sbjct: 288  EPMATVQNVRNQEKLKYPPYPLSTIELQKRASRYFRMSSEHTMK 331


>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223533243|gb|EEF34998.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 833

 Score =  733 bits (1891), Expect(2) = 0.0
 Identities = 348/482 (72%), Positives = 396/482 (82%), Gaps = 2/482 (0%)
 Frame = -1

Query: 1882 TIVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHH 1703
            TIV++QQ HP+WGSYAQRLLDP   LWRNP+ GGHDDKAHPPIHPTKFS GE+GWS DHH
Sbjct: 353  TIVRDQQAHPIWGSYAQRLLDPGTGLWRNPSTGGHDDKAHPPIHPTKFSPGETGWSQDHH 412

Query: 1702 KVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMI 1523
            +VYELVVRHFLACVSQPA+GAETTVEIDIAGEQFSASGRVI+AKNYLDVYRFE+WGGSMI
Sbjct: 413  RVYELVVRHFLACVSQPAVGAETTVEIDIAGEQFSASGRVILAKNYLDVYRFESWGGSMI 472

Query: 1522 PTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYA 1343
            PTY +GQQF PTTLTLD+GVTRPPPLLSE+DLLSCMDKAGIGTDATMHDHIKKLLDRFYA
Sbjct: 473  PTYVHGQQFMPTTLTLDSGVTRPPPLLSESDLLSCMDKAGIGTDATMHDHIKKLLDRFYA 532

Query: 1342 TKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQ 1163
            TKD++ RFSPT LGEALVMGYDDMGYELWKP LR+MME DMK VSMG K KAEVLE CLQ
Sbjct: 533  TKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRSMMEYDMKEVSMGHKSKAEVLETCLQ 592

Query: 1162 QMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPD 983
            QMK CF+DAR+NK KL EAMAVFFERS+RS+ N+ HA  ++VR+CGLC+E++MVLR+  D
Sbjct: 593  QMKTCFLDARINKVKLLEAMAVFFERSDRSSGNDNHATVDIVRQCGLCRETNMVLRRNRD 652

Query: 982  GNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVN 803
            GNFMVGC+G+PQCRN +WLPG + EA VTT++C+ C+PGPVYLIQFKFR+LEIPP ++VN
Sbjct: 653  GNFMVGCMGYPQCRNAIWLPGPIIEATVTTSVCNYCTPGPVYLIQFKFRQLEIPPGFSVN 712

Query: 802  HLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSS 623
            HLGCIGGCDD LRQL ++CGTGSR  +                           QTGH+S
Sbjct: 713  HLGCIGGCDDTLRQLTDICGTGSRVQARARAPNTTPSNSQQSNTRFATCVHCH-QTGHAS 771

Query: 622  GSYANAPESSRGRNSR--SQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCN 449
                     SR   SR  +++ GESS+ C +CG PC LRTANT  NRGRKFYSC +Q CN
Sbjct: 772  IDCPLQLSGSRRVQSRGTNEQMGESSVTCGTCGTPCALRTANTANNRGRKFYSCPSQSCN 831

Query: 448  FF 443
            FF
Sbjct: 832  FF 833



 Score =  277 bits (708), Expect(2) = 0.0
 Identities = 130/163 (79%), Positives = 145/163 (88%)
 Frame = -2

Query: 2406 QHLVRPNQLFSDAVDARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQF 2227
            Q+LV PNQ FSDAVDARQEIDLRIGASFTRFQT+LLRD FV+D A D+ N++LSYGPCQF
Sbjct: 162  QNLVSPNQWFSDAVDARQEIDLRIGASFTRFQTLLLRDKFVIDSAQDDRNLVLSYGPCQF 221

Query: 2226 PTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQE 2047
            PTLGFIVER+WE+QSHE EEFWTINC+H S EG A F+WMRGHLFDYT A I+YE+CV E
Sbjct: 222  PTLGFIVERYWEIQSHESEEFWTINCSHTSVEGIANFSWMRGHLFDYTSAVILYELCVLE 281

Query: 2046 PTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK 1918
            PTATVT V+Q+EK KYPP+PLSTIELEKRASRYF MSSE TMK
Sbjct: 282  PTATVTKVQQKEKQKYPPYPLSTIELEKRASRYFHMSSEQTMK 324


>ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Glycine max]
            gi|571460704|ref|XP_006581776.1| PREDICTED: DNA
            topoisomerase 3-alpha isoform X2 [Glycine max]
          Length = 913

 Score =  734 bits (1894), Expect(2) = 0.0
 Identities = 374/568 (65%), Positives = 422/568 (74%), Gaps = 14/568 (2%)
 Frame = -1

Query: 1882 TIVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHH 1703
            TIVQEQQGHP WG YAQRL+DPEA LWRNP GGGHDDKAHPPI+PTKFS GESGWS DH 
Sbjct: 351  TIVQEQQGHPEWGIYAQRLMDPEAGLWRNPRGGGHDDKAHPPIYPTKFSTGESGWSQDHR 410

Query: 1702 KVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMI 1523
            K+YELVVRHFLACVS+PA+GAETTVEI+IAGE FSA GRVI+ KNYLDVYR+E+WGGSMI
Sbjct: 411  KLYELVVRHFLACVSKPALGAETTVEINIAGELFSACGRVILEKNYLDVYRYESWGGSMI 470

Query: 1522 PTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDK--AGIGTDATMHDHIKKLLDRF 1349
            PTY  GQQF PT LTL++GVTRPPPLLSEADLLS MD+  A IGTDATM DHIKK+LDR 
Sbjct: 471  PTYTNGQQFNPTKLTLESGVTRPPPLLSEADLLSYMDREEAKIGTDATMQDHIKKMLDRS 530

Query: 1348 YATKDSSMRFSPTKLGEALVMGYDD--MGYELWKPYLRAMMESDMKAVSMGTKRKAEVLE 1175
            YATKDSS RF+PT LGEALV+GYDD  M Y+LWKP LR+ ME  M  V  G K KAEVL 
Sbjct: 531  YATKDSSTRFTPTNLGEALVLGYDDIDMTYKLWKPDLRSEMEKKMDDVKKGDKSKAEVLV 590

Query: 1174 ACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLR 995
              LQ+M+ACF++ARLNK KL EAMA+FFERS RS+S+E HA GEVVR+CGLCQESDM+LR
Sbjct: 591  TILQKMEACFLEARLNKVKLLEAMAIFFERSTRSSSDELHATGEVVRRCGLCQESDMLLR 650

Query: 994  KKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPN 815
            K  DGNFMVGC+G+PQCRN VWLPGSVSEA+VTTN C+ C+PGPVYLIQFKFRRLEIPPN
Sbjct: 651  KNRDGNFMVGCMGYPQCRNAVWLPGSVSEAVVTTNTCNFCTPGPVYLIQFKFRRLEIPPN 710

Query: 814  YNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQT 635
            Y+ NHLGCIGGCD+IL QL E+CG G R  +                           +T
Sbjct: 711  YSPNHLGCIGGCDEILAQLTEICGRGPRMPARPRGPTAPTSNAHHTNPRQGACMNCR-ET 769

Query: 634  GHSSGS----YANAPESSRGRNSRSQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSC 467
            GHSS      Y N        +  S+  GE+S+ CSSCG PC LRTANT  NRGRKFYSC
Sbjct: 770  GHSSTDCPLRYGNVQ-----HHGTSEHNGEASVSCSSCGTPCVLRTANTVNNRGRKFYSC 824

Query: 466  QAQGCNFFVWED--NASSGG-TVPRGSI--XXXXXXXXXXXXXXXXXXXXXXXXXXSFMS 302
            Q+Q CNFFVWED  NA +GG +V R +                             +FMS
Sbjct: 825  QSQECNFFVWEDSLNAGTGGRSVTRSNSIPALNPRQTGGRGSRGRGGQYGSRTANTTFMS 884

Query: 301  ATGEPISG-RCFVCGDPGHFANACPNRG 221
            ATG+PISG RC+ CGDP HFAN CP+RG
Sbjct: 885  ATGDPISGRRCYTCGDPSHFANVCPHRG 912



 Score =  275 bits (702), Expect(2) = 0.0
 Identities = 124/158 (78%), Positives = 145/158 (91%)
 Frame = -2

Query: 2391 PNQLFSDAVDARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQFPTLGF 2212
            P++  +DAVD RQEIDLRIGASFTRFQTML++DAF++D ATD+ N +LSYGPCQFPTLGF
Sbjct: 165  PDKRVADAVDVRQEIDLRIGASFTRFQTMLMKDAFIIDTATDDRNRVLSYGPCQFPTLGF 224

Query: 2211 IVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQEPTATV 2032
            +VERFWE+Q+HEPEEFW+I C+H S+EGTA F+WMRG LFDYTCA IIYEMCV+EPTATV
Sbjct: 225  VVERFWEIQAHEPEEFWSIICSHESKEGTAEFSWMRGRLFDYTCAVIIYEMCVEEPTATV 284

Query: 2031 TNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK 1918
            TN+RQQEK KYPP PL+TIEL+KRASRYFRMSS+HTMK
Sbjct: 285  TNIRQQEKPKYPPFPLNTIELQKRASRYFRMSSDHTMK 322


>ref|XP_006581778.1| PREDICTED: DNA topoisomerase 3-alpha isoform X4 [Glycine max]
          Length = 885

 Score =  734 bits (1894), Expect(2) = 0.0
 Identities = 374/568 (65%), Positives = 422/568 (74%), Gaps = 14/568 (2%)
 Frame = -1

Query: 1882 TIVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHH 1703
            TIVQEQQGHP WG YAQRL+DPEA LWRNP GGGHDDKAHPPI+PTKFS GESGWS DH 
Sbjct: 323  TIVQEQQGHPEWGIYAQRLMDPEAGLWRNPRGGGHDDKAHPPIYPTKFSTGESGWSQDHR 382

Query: 1702 KVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMI 1523
            K+YELVVRHFLACVS+PA+GAETTVEI+IAGE FSA GRVI+ KNYLDVYR+E+WGGSMI
Sbjct: 383  KLYELVVRHFLACVSKPALGAETTVEINIAGELFSACGRVILEKNYLDVYRYESWGGSMI 442

Query: 1522 PTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDK--AGIGTDATMHDHIKKLLDRF 1349
            PTY  GQQF PT LTL++GVTRPPPLLSEADLLS MD+  A IGTDATM DHIKK+LDR 
Sbjct: 443  PTYTNGQQFNPTKLTLESGVTRPPPLLSEADLLSYMDREEAKIGTDATMQDHIKKMLDRS 502

Query: 1348 YATKDSSMRFSPTKLGEALVMGYDD--MGYELWKPYLRAMMESDMKAVSMGTKRKAEVLE 1175
            YATKDSS RF+PT LGEALV+GYDD  M Y+LWKP LR+ ME  M  V  G K KAEVL 
Sbjct: 503  YATKDSSTRFTPTNLGEALVLGYDDIDMTYKLWKPDLRSEMEKKMDDVKKGDKSKAEVLV 562

Query: 1174 ACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLR 995
              LQ+M+ACF++ARLNK KL EAMA+FFERS RS+S+E HA GEVVR+CGLCQESDM+LR
Sbjct: 563  TILQKMEACFLEARLNKVKLLEAMAIFFERSTRSSSDELHATGEVVRRCGLCQESDMLLR 622

Query: 994  KKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPN 815
            K  DGNFMVGC+G+PQCRN VWLPGSVSEA+VTTN C+ C+PGPVYLIQFKFRRLEIPPN
Sbjct: 623  KNRDGNFMVGCMGYPQCRNAVWLPGSVSEAVVTTNTCNFCTPGPVYLIQFKFRRLEIPPN 682

Query: 814  YNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQT 635
            Y+ NHLGCIGGCD+IL QL E+CG G R  +                           +T
Sbjct: 683  YSPNHLGCIGGCDEILAQLTEICGRGPRMPARPRGPTAPTSNAHHTNPRQGACMNCR-ET 741

Query: 634  GHSSGS----YANAPESSRGRNSRSQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSC 467
            GHSS      Y N        +  S+  GE+S+ CSSCG PC LRTANT  NRGRKFYSC
Sbjct: 742  GHSSTDCPLRYGNVQ-----HHGTSEHNGEASVSCSSCGTPCVLRTANTVNNRGRKFYSC 796

Query: 466  QAQGCNFFVWED--NASSGG-TVPRGSI--XXXXXXXXXXXXXXXXXXXXXXXXXXSFMS 302
            Q+Q CNFFVWED  NA +GG +V R +                             +FMS
Sbjct: 797  QSQECNFFVWEDSLNAGTGGRSVTRSNSIPALNPRQTGGRGSRGRGGQYGSRTANTTFMS 856

Query: 301  ATGEPISG-RCFVCGDPGHFANACPNRG 221
            ATG+PISG RC+ CGDP HFAN CP+RG
Sbjct: 857  ATGDPISGRRCYTCGDPSHFANVCPHRG 884



 Score =  275 bits (702), Expect(2) = 0.0
 Identities = 124/158 (78%), Positives = 145/158 (91%)
 Frame = -2

Query: 2391 PNQLFSDAVDARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQFPTLGF 2212
            P++  +DAVD RQEIDLRIGASFTRFQTML++DAF++D ATD+ N +LSYGPCQFPTLGF
Sbjct: 165  PDKRVADAVDVRQEIDLRIGASFTRFQTMLMKDAFIIDTATDDRNRVLSYGPCQFPTLGF 224

Query: 2211 IVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQEPTATV 2032
            +VERFWE+Q+HEPEEFW+I C+H S+EGTA F+WMRG LFDYTCA IIYEMCV+EPTATV
Sbjct: 225  VVERFWEIQAHEPEEFWSIICSHESKEGTAEFSWMRGRLFDYTCAVIIYEMCVEEPTATV 284

Query: 2031 TNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK 1918
            TN+RQQEK KYPP PL+TIEL+KRASRYFRMSS+HTMK
Sbjct: 285  TNIRQQEKPKYPPFPLNTIELQKRASRYFRMSSDHTMK 322


>ref|NP_201197.1| topoisomerase 3alpha [Arabidopsis thaliana]
            gi|8777305|dbj|BAA96895.1| DNA topoisomerase III
            [Arabidopsis thaliana] gi|169218912|gb|ACA50279.1|
            topoisomerase 3 alpha [Arabidopsis thaliana]
            gi|332010433|gb|AED97816.1| topoisomerase 3alpha
            [Arabidopsis thaliana]
          Length = 926

 Score =  736 bits (1899), Expect(2) = 0.0
 Identities = 361/568 (63%), Positives = 416/568 (73%), Gaps = 16/568 (2%)
 Frame = -1

Query: 1879 IVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHK 1700
            +V+EQ  HP WGSYAQRLL+PE  LWRNP  GGHDDKAHPPIHPTKFS+GES WS DH  
Sbjct: 359  MVEEQTRHPAWGSYAQRLLEPEGGLWRNPANGGHDDKAHPPIHPTKFSSGESNWSRDHLN 418

Query: 1699 VYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIP 1520
            VYELVVRH+LACVSQPA+ AETTVEIDIAGE+FSASGR I+AKNYL+VYRFE+WGGS+IP
Sbjct: 419  VYELVVRHYLACVSQPAVAAETTVEIDIAGERFSASGRAILAKNYLEVYRFESWGGSVIP 478

Query: 1519 TYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 1340
             Y  GQQF PTTLTLDA VTRPPPLL EADLLSCMDKAGIGTDATMHDHIKKLLDR YAT
Sbjct: 479  VYEKGQQFIPTTLTLDAAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYAT 538

Query: 1339 KDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQ 1160
            KD++ RFSPT LGEALVMGYDDMGYELWKP LRA+ME DM  VS+G K KAEVLE CLQQ
Sbjct: 539  KDANTRFSPTNLGEALVMGYDDMGYELWKPNLRALMEHDMNEVSVGRKTKAEVLETCLQQ 598

Query: 1159 MKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDG 980
            MKACF+DAR+ K KL EAM +FFERSN ++ +E    GEVVR+C LC ESDM LRK  DG
Sbjct: 599  MKACFLDARVKKSKLLEAMTIFFERSNNTDESESQTAGEVVRRCNLCNESDMALRKNRDG 658

Query: 979  NFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNH 800
            NFMVGC+ +PQCRN VWLPG   EA VTTN+C +C PGPVY I FKFR++ IPP ++VNH
Sbjct: 659  NFMVGCMNYPQCRNAVWLPGPTLEASVTTNVCQSCGPGPVYKILFKFRQIGIPPGFDVNH 718

Query: 799  LGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSSG 620
            LGC+GGCDDIL+QL+++CGTGSR+ +                           Q GH+S 
Sbjct: 719  LGCVGGCDDILKQLIDICGTGSRSQARRTPGTAPSNNIQGSNTRQSNVCIHCQQRGHAST 778

Query: 619  SYANAPESSRGRNSRSQEAG----ESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGC 452
            +  +   +SR  NSR         ES++ C++CG+ C LRTANT ANRGR+F+SC  QGC
Sbjct: 779  NCPSRVPASR--NSRPTATNPRNDESTVSCNTCGSQCVLRTANTEANRGRQFFSCPTQGC 836

Query: 451  NFFVWEDN-----------ASSGGTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXSFM 305
            +FF WED+           ++SGG+  RGS                           SF+
Sbjct: 837  SFFAWEDSINNSSGNATTGSNSGGSGRRGS------RGRGRGGRGGQSSGGRRGSGTSFV 890

Query: 304  SATGEPISG-RCFVCGDPGHFANACPNR 224
            SATGEP+SG RCF CGDP HFANACPNR
Sbjct: 891  SATGEPVSGIRCFSCGDPSHFANACPNR 918



 Score =  271 bits (692), Expect(2) = 0.0
 Identities = 126/165 (76%), Positives = 145/165 (87%), Gaps = 1/165 (0%)
 Frame = -2

Query: 2409 VQHLVRPNQLFSDAVDARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQ 2230
            VQ+L  PNQLF++AVDARQEIDLRIGASFTRFQTMLLRD F +D   +  + ++SYGPCQ
Sbjct: 165  VQNLRDPNQLFAEAVDARQEIDLRIGASFTRFQTMLLRDRFAIDSTGEERSRVISYGPCQ 224

Query: 2229 FPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQ 2050
            FPTLGFIVER+WE+Q+HEPEEFWTINC+H SEEG ATFNWMRGHLFDY  A I+YEMCV+
Sbjct: 225  FPTLGFIVERYWEIQAHEPEEFWTINCSHQSEEGLATFNWMRGHLFDYASAVILYEMCVE 284

Query: 2049 EPTATVTNV-RQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK 1918
            EPTATV NV   +E+ KYPP+PL+TIELEKRASRYFR+SSEHTMK
Sbjct: 285  EPTATVMNVPHPRERFKYPPYPLNTIELEKRASRYFRLSSEHTMK 329


>ref|XP_003558748.1| PREDICTED: DNA topoisomerase 3-alpha [Brachypodium distachyon]
          Length = 924

 Score =  719 bits (1857), Expect(2) = 0.0
 Identities = 350/571 (61%), Positives = 412/571 (72%), Gaps = 17/571 (2%)
 Frame = -1

Query: 1879 IVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHK 1700
            I  EQ  HPVWGSYAQRLL+PE  LWRNP+ GGHDDKAHPPIHPTKF+AGES WS DHHK
Sbjct: 360  IAHEQVPHPVWGSYAQRLLNPEERLWRNPSNGGHDDKAHPPIHPTKFTAGESNWSQDHHK 419

Query: 1699 VYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIP 1520
            VYELVVRHFLAC SQPA+GAETTVEIDIAGEQF+ASGRV++AKNYLDVYR+++WGGS++P
Sbjct: 420  VYELVVRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVVLAKNYLDVYRYDSWGGSLLP 479

Query: 1519 TYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 1340
            TY  GQQF PTTLTLD+GVTRPPPLL+EADLLSCMDKAGIGTDATMH+HIKKLLDR YAT
Sbjct: 480  TYTIGQQFVPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHEHIKKLLDRCYAT 539

Query: 1339 KDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQ 1160
            KD++ RFSPT LGEALVMGYD+MGYELWKPYLRAMME+DMKAVS+GTK K EVLE CLQQ
Sbjct: 540  KDANSRFSPTNLGEALVMGYDEMGYELWKPYLRAMMEADMKAVSIGTKSKLEVLEGCLQQ 599

Query: 1159 MKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDG 980
            MKACF+DAR NK KL +AM  FF RSNR  +  Q+ + EVVR CG C +S+M+L++KP+G
Sbjct: 600  MKACFLDARSNKVKLLDAMGTFFARSNRPLNETQNPM-EVVRPCGACNDSEMLLKRKPNG 658

Query: 979  NFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNH 800
             FMVGC  FPQCRNVVWLPGS+SEA VT  IC TC PGPVY IQFKF R +IPPN++V+H
Sbjct: 659  GFMVGCRSFPQCRNVVWLPGSLSEAAVTEQICPTCVPGPVYKIQFKFNRRDIPPNFDVDH 718

Query: 799  LGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSSG 620
            LGCIGGCDD+L++L+E+    + N ++                         ++    +G
Sbjct: 719  LGCIGGCDDVLKELIEITRFVNHNQTTTPARGQSQTPSGVRQGAPRQDLHPGFR---PAG 775

Query: 619  SYANA------PESSRGRNSRSQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQ 458
             +AN       P+  R  ++++       + C++CG  C  RTANT ANRGRKFY CQ  
Sbjct: 776  QFANGHTPVVNPQGFRSTHTQNSRNASGQVLCTTCGEACISRTANTEANRGRKFYKCQDS 835

Query: 457  GCNFFVWEDNASSGGTVPRG-----------SIXXXXXXXXXXXXXXXXXXXXXXXXXXS 311
            GC FF WED   +   VPRG           +                           +
Sbjct: 836  GCGFFAWEDELEN--VVPRGRGRGGRGGGRQASASAGRRGGTQGRGRRGRGRNADANGMT 893

Query: 310  FMSATGEPISGRCFVCGDPGHFANACPNRGR 218
            F+SATG+ + G CF CGDP HFANACPNRGR
Sbjct: 894  FVSATGDTVHGCCFACGDPSHFANACPNRGR 924



 Score =  285 bits (730), Expect(2) = 0.0
 Identities = 132/164 (80%), Positives = 150/164 (91%)
 Frame = -2

Query: 2409 VQHLVRPNQLFSDAVDARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQ 2230
            VQHL RPN+LF+DAVDARQEIDLRIGASFTRFQTMLL+DAFVLD + +  N++LSYGPCQ
Sbjct: 167  VQHLGRPNKLFADAVDARQEIDLRIGASFTRFQTMLLKDAFVLDVSGEERNMVLSYGPCQ 226

Query: 2229 FPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQ 2050
            FPTLGFIVERFWE+Q+HEPEEFWTINC+H S+EGTA+F W+RGHLFDY+ A +IYEMCVQ
Sbjct: 227  FPTLGFIVERFWEIQAHEPEEFWTINCSHTSDEGTASFGWIRGHLFDYSSAIVIYEMCVQ 286

Query: 2049 EPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK 1918
            EP ATV NVR QEKLKYPP+PLST+EL+KRASR  RMSSEHTMK
Sbjct: 287  EPMATVQNVRNQEKLKYPPYPLSTLELQKRASRCCRMSSEHTMK 330


>ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arabidopsis lyrata subsp.
            lyrata] gi|297310711|gb|EFH41135.1| hypothetical protein
            ARALYDRAFT_496584 [Arabidopsis lyrata subsp. lyrata]
          Length = 923

 Score =  734 bits (1894), Expect(2) = 0.0
 Identities = 359/560 (64%), Positives = 410/560 (73%), Gaps = 8/560 (1%)
 Frame = -1

Query: 1879 IVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHK 1700
            +V+EQ+ HP WGSYAQRLL+PE  LWRNP  GGHDDKAHPPIHPTKFS+GES WS DH  
Sbjct: 359  MVEEQRRHPAWGSYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPTKFSSGESNWSRDHLN 418

Query: 1699 VYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIP 1520
            VYELVVRH+LACVSQPA  AETTVEIDIAGE+FSASGR I+AKNYL+VYRFE+WGGS+IP
Sbjct: 419  VYELVVRHYLACVSQPAKAAETTVEIDIAGERFSASGRAILAKNYLEVYRFESWGGSVIP 478

Query: 1519 TYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 1340
             Y  GQQF PTTLTLD+ VTRPPPLL EADLLSCMDKAGIGTDATMHDHIKKLLDR YAT
Sbjct: 479  VYEKGQQFIPTTLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYAT 538

Query: 1339 KDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQ 1160
            KD++ RFSPT LGEALVMGYDDMGYELWKP LRA+ME DM  VS+G K KAEVLE CLQQ
Sbjct: 539  KDANTRFSPTNLGEALVMGYDDMGYELWKPNLRALMERDMNEVSVGRKTKAEVLETCLQQ 598

Query: 1159 MKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDG 980
            MKACF+DAR+ K KL EAM +FFERSN ++ +E    GEV+R+C LC ESDM LRK  DG
Sbjct: 599  MKACFLDARVKKSKLLEAMTIFFERSNNTDESESQTAGEVIRRCNLCNESDMALRKNRDG 658

Query: 979  NFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNH 800
            NFMVGC+ +PQCRN VWLPG   EA VTT++C TC PGPVY I FKFR++ IPP ++VNH
Sbjct: 659  NFMVGCMNYPQCRNAVWLPGPTLEASVTTDVCQTCGPGPVYKILFKFRQIGIPPGFDVNH 718

Query: 799  LGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSSG 620
            LGCIGGCDDIL+QL+++CGTGSR+ +                           Q GH+S 
Sbjct: 719  LGCIGGCDDILKQLIDICGTGSRSQARRAPGTVPSNNIQGSNTRQGNFCIHCQQRGHAS- 777

Query: 619  SYANAPESSRG-RNSR----SQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQG 455
              AN P  +   RNSR    +    ES++ C++CG  C LRTANT ANRGR+F+SC  QG
Sbjct: 778  --ANCPSRATAFRNSRLTATNPRNDESTVSCNTCGTQCVLRTANTEANRGRQFFSCPTQG 835

Query: 454  CNFFVWED--NASSGGTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXSFMSATGEPIS 281
            C+FF WED  N SSG      +                           SF+SATGEP+S
Sbjct: 836  CSFFAWEDSINNSSGNATTGSNSGGSGRRGRGRGGRGGQSGGGRRNSGTSFVSATGEPVS 895

Query: 280  G-RCFVCGDPGHFANACPNR 224
            G RCF CGDP HFAN CPNR
Sbjct: 896  GIRCFSCGDPSHFANVCPNR 915



 Score =  271 bits (692), Expect(2) = 0.0
 Identities = 126/165 (76%), Positives = 145/165 (87%), Gaps = 1/165 (0%)
 Frame = -2

Query: 2409 VQHLVRPNQLFSDAVDARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQ 2230
            VQ+L  PNQLF++AVDARQEIDLRIGASFTRFQTMLLRD F +D   +  + ++SYGPCQ
Sbjct: 165  VQNLRDPNQLFAEAVDARQEIDLRIGASFTRFQTMLLRDRFAIDSTGEERSRVISYGPCQ 224

Query: 2229 FPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQ 2050
            FPTLGFIVER+WE+Q+HEPEEFWTINC+H SEEG ATFNWMRGHLFDY  A I+YEMCV+
Sbjct: 225  FPTLGFIVERYWEIQAHEPEEFWTINCSHQSEEGLATFNWMRGHLFDYASAVILYEMCVE 284

Query: 2049 EPTATVTNV-RQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK 1918
            EPTATV NV   +E+ KYPP+PL+TIELEKRASRYFR+SSEHTMK
Sbjct: 285  EPTATVMNVPHPRERFKYPPYPLNTIELEKRASRYFRLSSEHTMK 329


>tpg|DAA43538.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea mays]
          Length = 915

 Score =  708 bits (1828), Expect(2) = 0.0
 Identities = 345/560 (61%), Positives = 410/560 (73%), Gaps = 8/560 (1%)
 Frame = -1

Query: 1879 IVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHK 1700
            IV+EQ  HPVWG+YAQRLL+PEA LWRNP+ GGHDDKAHPPIHPTKFS GE  WSPDH +
Sbjct: 358  IVREQVNHPVWGAYAQRLLNPEARLWRNPSNGGHDDKAHPPIHPTKFSEGERNWSPDHTR 417

Query: 1699 VYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIP 1520
            +YE VVRHFLAC SQPA+GAETTVEIDIAGEQF+ASGRVI+AKNYLDVYRF++WGG+++P
Sbjct: 418  LYEFVVRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVILAKNYLDVYRFDSWGGTLLP 477

Query: 1519 TYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 1340
            TYN GQQF PTTLTLD+GVTRPPPLL+EADLLSCMDKAGIGTDATMHDHIKKLLDR YAT
Sbjct: 478  TYNIGQQFVPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHDHIKKLLDRCYAT 537

Query: 1339 KDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQ 1160
            KD + RFSPT LGEALVMGYD+MGYELWKPYLR+MME+DMK+VS+GTK K+EVLE+CLQQ
Sbjct: 538  KDENTRFSPTNLGEALVMGYDEMGYELWKPYLRSMMEADMKSVSVGTKSKSEVLESCLQQ 597

Query: 1159 MKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDG 980
            MKACF+DAR+ K KL +AM  FF RSNR  +  Q+ + EVVR CG C  S+M+L+++  G
Sbjct: 598  MKACFLDARVKKAKLLDAMGTFFARSNRPINETQNPV-EVVRPCGACNGSEMLLKRRASG 656

Query: 979  NFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNH 800
             FMVGC  +PQCRNVVWLPGS+SEA VT  +C  C+PGPVY IQFKFRR +IPPN++V+H
Sbjct: 657  EFMVGCRSYPQCRNVVWLPGSLSEAAVTNQVCPICAPGPVYKIQFKFRRRDIPPNFDVDH 716

Query: 799  LGCIGGCDDILRQLVEVCGTGSRNNSSV----XXXXXXXXXXXXXXXXXXXXXXXAWQTG 632
            LGC+GGCDDIL+ L+E+   GSR+ ++                                 
Sbjct: 717  LGCVGGCDDILKDLMEISRFGSRSQAATPARGPTPNGVGQGTPRQDLHTIFRPASQLNND 776

Query: 631  HSSGSYANAPESSRGRN-SRSQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQG 455
            + S  ++    S+  +N S + +AG+  + C+SCGA C  R ANT ANRGR+FY CQ  G
Sbjct: 777  NPSVMHSQGFRSTHTQNPSNASDAGQ--VLCTSCGALCISRIANTEANRGRRFYKCQDPG 834

Query: 454  CNFFVWEDNASSG---GTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXSFMSATGEPI 284
            C FF WED   +G   G   RGS                            F+SATG+ +
Sbjct: 835  CGFFKWEDEVDNGTGRGRRGRGSSRQASASASAGRRGGGRRGRGRNADGGMFVSATGDTV 894

Query: 283  SGRCFVCGDPGHFANACPNR 224
             G CF CGDP HFANACPNR
Sbjct: 895  LGCCFNCGDPSHFANACPNR 914



 Score =  292 bits (748), Expect(2) = 0.0
 Identities = 134/164 (81%), Positives = 150/164 (91%)
 Frame = -2

Query: 2409 VQHLVRPNQLFSDAVDARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQ 2230
            VQHL RPN+LF+DAVDARQEIDLRIGASFTRFQTMLL+DAFV+D   D  +++LSYGPCQ
Sbjct: 165  VQHLGRPNKLFADAVDARQEIDLRIGASFTRFQTMLLKDAFVIDVTGDERSLVLSYGPCQ 224

Query: 2229 FPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQ 2050
            FPTLGFIVERFWE+Q+HEPEEFWTINCTH S+EGTA+F W+RGHLFDY+CA  IYEMCV 
Sbjct: 225  FPTLGFIVERFWEIQAHEPEEFWTINCTHTSDEGTASFGWIRGHLFDYSCAISIYEMCVS 284

Query: 2049 EPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK 1918
            EP ATV NVR QEKLKYPP+PLST+EL+KRASRYFRMSSEHTMK
Sbjct: 285  EPMATVQNVRNQEKLKYPPYPLSTVELQKRASRYFRMSSEHTMK 328


>ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group]
            gi|255674230|dbj|BAH92006.1| Os03g0165000 [Oryza sativa
            Japonica Group]
          Length = 928

 Score =  706 bits (1823), Expect(2) = 0.0
 Identities = 343/573 (59%), Positives = 411/573 (71%), Gaps = 18/573 (3%)
 Frame = -1

Query: 1882 TIVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHH 1703
            +IV EQ  HP WG+YAQRLLDPEA LWRNP+ GGHDDKAHPPIHPTKFSAGE+ W+ +H 
Sbjct: 360  SIVHEQVAHPNWGTYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGETNWTDNHK 419

Query: 1702 KVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMI 1523
            K+YELVVRHFLAC SQPA+GAETTVEIDIAGEQF+ASGRV++AKNYLDVYRF++WGG+++
Sbjct: 420  KLYELVVRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVVLAKNYLDVYRFDSWGGTLL 479

Query: 1522 PTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYA 1343
            PTY  GQQF PTTLTLD+G+TRPPPLL+EADLL CMDKAGIGTDATMHDHIKKLLDR YA
Sbjct: 480  PTYIIGQQFVPTTLTLDSGMTRPPPLLAEADLLGCMDKAGIGTDATMHDHIKKLLDRCYA 539

Query: 1342 TKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQ 1163
            TKD++ RFSPT LGEALVMGYD+MGYELWKPYLR+MME+DMK+VS+GTK K+EVLE CLQ
Sbjct: 540  TKDANTRFSPTNLGEALVMGYDEMGYELWKPYLRSMMEADMKSVSIGTKSKSEVLENCLQ 599

Query: 1162 QMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPD 983
            QMKACF+DAR NK KLF+AM  FF RS+R  +  Q++I E VR C  C ES+M L+++P 
Sbjct: 600  QMKACFLDARANKVKLFDAMGTFFARSSRPVNETQNSI-ETVRPCAACNESEMFLKQRPT 658

Query: 982  GNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVN 803
            G FMVGC GFPQCRNVVWLP S+S A VT  +C TC+PGPVY IQFKFRR +IPPN++V+
Sbjct: 659  GEFMVGCRGFPQCRNVVWLPRSLSGAAVTDQVCPTCAPGPVYKIQFKFRRRDIPPNFDVD 718

Query: 802  HLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSS 623
            HLGCIGGCDDIL++L+E+   GS + ++                        ++   H +
Sbjct: 719  HLGCIGGCDDILKELMELSRFGSHSQTATPARNQSQTASGVRQGSSRQDLHTSF---HPA 775

Query: 622  GSYANA------PESSRGRNSRSQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQA 461
              + N       P+  R  +++S       + C+SC  PC LRTANT ANRGRKFY CQ 
Sbjct: 776  VQFTNGQTPVVNPQGFRSTHTQSSGNASGQVQCTSCREPCVLRTANTEANRGRKFYKCQN 835

Query: 460  QGCNFFVWEDNASS------------GGTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXX 317
              C FF WED+  +            G +  R S                          
Sbjct: 836  LACGFFAWEDDVENSAPRGRGGRGRGGRSSSRQSSASASAGRRGGTQGRGRRGRGRNADG 895

Query: 316  XSFMSATGEPISGRCFVCGDPGHFANACPNRGR 218
              F++ATGEP+ G CF+CGDP HFAN CPN GR
Sbjct: 896  MMFVAATGEPVYGSCFICGDPTHFANVCPNLGR 928



 Score =  294 bits (752), Expect(2) = 0.0
 Identities = 136/164 (82%), Positives = 152/164 (92%)
 Frame = -2

Query: 2409 VQHLVRPNQLFSDAVDARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQ 2230
            VQHL RPN+LF+DAVDARQEIDLRIGASFTRFQTMLL+DAFVLD   D+ N+ILSYGPCQ
Sbjct: 168  VQHLDRPNKLFADAVDARQEIDLRIGASFTRFQTMLLKDAFVLDDTGDDRNIILSYGPCQ 227

Query: 2229 FPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQ 2050
            FPTLGFIVERFWE+Q+HEPEEFWTINC+H S+EGTA+F W+RGHLFDY+ A +IYEMCV+
Sbjct: 228  FPTLGFIVERFWEIQAHEPEEFWTINCSHTSDEGTASFGWIRGHLFDYSSAVVIYEMCVE 287

Query: 2049 EPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK 1918
            EP ATV NVR QEKLKYPP+PLSTIEL+KRASRYFRMSSEHTMK
Sbjct: 288  EPMATVQNVRNQEKLKYPPYPLSTIELQKRASRYFRMSSEHTMK 331