BLASTX nr result
ID: Rehmannia26_contig00003964
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00003964
(1720 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004508670.1| PREDICTED: replication protein A 70 kDa DNA-... 119 3e-24
gb|ESW27226.1| hypothetical protein PHAVU_003G184400g [Phaseolus... 112 6e-23
gb|EMJ12078.1| hypothetical protein PRUPE_ppa003038mg [Prunus pe... 104 5e-22
ref|XP_006394544.1| hypothetical protein EUTSA_v10003822mg [Eutr... 101 1e-21
ref|XP_006374397.1| hypothetical protein POPTR_0015s06800g [Popu... 109 4e-21
ref|XP_002328669.1| predicted protein [Populus trichocarpa] 109 4e-21
gb|EOY22080.1| Replication protein A 70 kDa DNA-binding subunit ... 107 1e-20
ref|XP_006280119.1| hypothetical protein CARUB_v10026014mg, part... 97 2e-20
ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-... 107 2e-20
ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-... 107 2e-20
ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arab... 95 9e-20
ref|NP_200908.1| replication protein A 70 kDa DNA-binding subuni... 94 1e-19
gb|EXC04889.1| Replication factor A protein 1 [Morus notabilis] 104 1e-19
ref|XP_006287282.1| hypothetical protein CARUB_v10000503mg [Caps... 98 2e-19
ref|XP_002871302.1| hypothetical protein ARALYDRAFT_325405 [Arab... 97 2e-19
ref|XP_006600581.1| PREDICTED: replication protein A 70 kDa DNA-... 103 3e-19
ref|XP_004236053.1| PREDICTED: replication protein A 70 kDa DNA-... 103 3e-19
ref|NP_196419.1| RPA70-kDa subunit B [Arabidopsis thaliana] gi|7... 96 1e-18
gb|AAB71836.1| replication protein A1 [Oryza sativa Indica Group... 101 1e-18
ref|NP_001049369.1| Os03g0214100 [Oryza sativa Japonica Group] g... 101 1e-18
>ref|XP_004508670.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cicer arietinum]
Length = 617
Score = 119 bits (299), Expect = 3e-24
Identities = 82/330 (24%), Positives = 153/330 (46%), Gaps = 13/330 (3%)
Frame = -3
Query: 1430 KTYIISNGEVKWVNPMYPSAHPEKELVLKKYTIVKDVIE--GIQDKIQFNFIQFKDIEPQ 1257
K Y IS G +K N + + + E+ L + + V++V+ G + +FNF+ + P
Sbjct: 240 KVYYISKGTLKVANKQFKTVQNDYEMTLNENSEVEEVVNEVGFVPETKFNFVPIDQLGPH 299
Query: 1256 FHKDDGINIYGIVTKVKDSRVVTN-SRGATKPLREITLMNQEYHPIVVSLWEDLAINEGY 1080
+K + +++ G+V V + + S + P R+IT+ ++ +VVSLW DLA N G
Sbjct: 300 VNKPELVDVVGVVKNVSSTMSIRRKSNNESVPKRDITIADETKKTVVVSLWGDLATNIGQ 359
Query: 1079 VLHQIENEKTIVGITKLIAKRYYGEVQLQTTAASVLQIQPITEEIDHMRHW--------S 924
L ++ +V I L + G V L + S++ I P T E +R W S
Sbjct: 360 ELLDAADQSPVVAIKSLKVGDFQG-VSLSAISKSLVLINPDTPEAQKLRSWYDSEGKDAS 418
Query: 923 LTIPHPVKVLELSMKQRMKGVKEVTLQQILHNRECLTE-DTYYCFKGFVEKVLNKPSLWY 747
+ + + R V+L I N +E ++ +G++ + ++WY
Sbjct: 419 MAALSSGSIPASNAGSRSVYSDRVSLADITSNHSLGSEKPAFFSIRGYISFIRPDQAMWY 478
Query: 746 DSCQNCSASIFKN-DVNAPCKKCNLEDVETTPRYRLVLNVTQGNDNASVTIFEDAATVYV 570
+C+ C+ + ++ D C+ C D + RY +V V+ + A ++ F + A +
Sbjct: 479 RACKTCNKKVTESIDAGYWCESCQKNDEQCNLRYIMVARVSDASGEAYISAFNEEAEKII 538
Query: 569 GCPIEEYITSTKEGEQKSKYYRGLSLQEST 480
GC +E + S K E + Y+ + L++ST
Sbjct: 539 GCSADE-LDSLKSQEGEDNPYQ-MKLKQST 566
>gb|ESW27226.1| hypothetical protein PHAVU_003G184400g [Phaseolus vulgaris]
Length = 617
Score = 112 bits (279), Expect(2) = 6e-23
Identities = 84/339 (24%), Positives = 157/339 (46%), Gaps = 13/339 (3%)
Frame = -3
Query: 1430 KTYIISNGEVKWVNPMYPSAHPEKELVLKKYTIVKDVIE--GIQDKIQFNFIQFKDIEPQ 1257
K Y IS G +K N + + + E+ L + + V++V + + +F+F+Q + P
Sbjct: 242 KVYYISKGTLKVANKQFKTVQNDYEMTLNENSEVEEVADEASFVPETKFSFVQIDQLGPY 301
Query: 1256 FHKDDGINIYGIVTKVKDSRVVTN-SRGATKPLREITLMNQEYHPIVVSLWEDLAINEGY 1080
+K + +++ G+V V + + S + P R+IT+ ++ +VVSLW DLA N G
Sbjct: 302 VNKSELVDVIGVVKSVSSTMSIRRKSDNESIPKRDITIADETKKTVVVSLWNDLATNTGQ 361
Query: 1079 VLHQIENEKTIVGITKLIAKRYYGEVQLQTTAASVLQIQPITEEIDHMRHWSLTIPHPVK 900
L I ++ +V I L + G V L T + SV+ + P E +R W
Sbjct: 362 ELLDIVDKSPVVAIKSLRVGDFQG-VSLSTISRSVVLVNPDVPEAKKLRSWYEFEGKDAA 420
Query: 899 VLEL---SMKQRMKGVK-----EVTLQQILHNREC-LTEDTYYCFKGFVEKVLNKPSLWY 747
+ L S G++ V L I N+ + ++ KG++ + ++WY
Sbjct: 421 MDALGSGSSPTSNNGIRSVYSDRVALSHITSNQSLGDMKPAFFSLKGYISFIKPDQAMWY 480
Query: 746 DSCQNCSASIFKNDVNAP-CKKCNLEDVETTPRYRLVLNVTQGNDNASVTIFEDAATVYV 570
+C+ C+ + ++ + C+ C D + + RY +V V + A +++F D A V
Sbjct: 481 RACKTCNKKVTESIGSGYWCEGCQKSDEQCSLRYIMVARVCDTSGEAFISVFNDEAEKIV 540
Query: 569 GCPIEEYITSTKEGEQKSKYYRGLSLQESTEF*FLFALN 453
GC ++ + K E + Y L L+++T LF ++
Sbjct: 541 GCSADD-LDDLKSQEGEDNPY-NLKLKQATWVPHLFRVS 577
Score = 24.3 bits (51), Expect(2) = 6e-23
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 1638 PVVSVQILQINQKTFTLRLRVVRVGS-EINCGSNSSTRIHKMIMIDDEGVQIGVIMFND 1465
P+VS+ Q N +T+++ V G+ + + + + D+EG QI MFND
Sbjct: 174 PLVSLNPYQGN---WTIKVSVTSKGNMRTYKNARGEGCVFNVELTDEEGTQIQATMFND 229
>gb|EMJ12078.1| hypothetical protein PRUPE_ppa003038mg [Prunus persica]
Length = 609
Score = 104 bits (260), Expect(2) = 5e-22
Identities = 85/341 (24%), Positives = 157/341 (46%), Gaps = 15/341 (4%)
Frame = -3
Query: 1430 KTYIISNGEVKWVNPMYPSAHPEKELVLKKYTIVKDVIE--GIQDKIQFNFIQFKDIEPQ 1257
K Y IS G ++ N + + + E+ L + + V++ I + +FNF+ + P
Sbjct: 232 KVYYISKGSLRVANKQFKTVQNDYEMNLNENSEVEEAINEAAFVPETKFNFVPVDMLGPH 291
Query: 1256 FHKDDGINIYGIVTKVKDSRVVTN-SRGATKPLREITLMNQEYHPIVVSLWEDLAINEGY 1080
+ + +++ G+V V + + S + P R+IT+ ++ +VVSLW +LA + G
Sbjct: 292 VNGKELVDVIGVVQSVSPTMSIRRKSNNESIPKRDITIADETKKTVVVSLWGELATSVGQ 351
Query: 1079 VLHQIENEKTIVGITKLIAKRYYGEVQLQTTAASVLQIQPITEEIDHMRHW--------- 927
L I ++ IV I L + G V L T + S + + P E +R W
Sbjct: 352 ELLDIADQSPIVAIKSLKVGDFQG-VSLSTLSRSTVVVNPELPEAKRLRSWYDSEGKGAS 410
Query: 926 SLTIPHPVKVLELSMKQRMKGVKEVTLQQILHNRECLTED--TYYCFKGFVEKVLNKPSL 753
++ + + L S + M V+L I + L ED ++ K F+ + +L
Sbjct: 411 LASVGNGMSPLAKSGARSMYS-DRVSLSHI-SDDPSLGEDKPVFFSVKAFISSIRPDQAL 468
Query: 752 WYDSCQNCSASIFKNDVNAP-CKKCNLEDVETTPRYRLVLNVTQGNDNASVTIFEDAATV 576
WY +C+ C+ + + + C+ C D E + RY LV VT + A +++F + A
Sbjct: 469 WYRACKTCNKKVTEAIGSGYWCEACQKNDEECSLRYILVARVTDASGEAYLSLFNEEAER 528
Query: 575 YVGCPIEEYITSTKEGEQKSKYYRGLSLQESTEF*FLFALN 453
+GC +E + K E + Y+ L L+++T LF ++
Sbjct: 529 VIGCSADE-LDKLKSQEGEENVYQ-LKLKQATWVPHLFRVS 567
Score = 28.5 bits (62), Expect(2) = 5e-22
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -2
Query: 1641 HPVVSVQILQINQKTFTLRLRVVRVGS-EINCGSNSSTRIHKMIMIDDEGVQIGVIMFND 1465
HP+VS+ Q N +T+++RV G+ + + + + D+EG QI MFN+
Sbjct: 163 HPLVSLNPYQGN---WTIKVRVTNKGTMRTYKNARGEGCVFNVELTDEEGTQIQATMFNE 219
>ref|XP_006394544.1| hypothetical protein EUTSA_v10003822mg [Eutrema salsugineum]
gi|557091183|gb|ESQ31830.1| hypothetical protein
EUTSA_v10003822mg [Eutrema salsugineum]
Length = 625
Score = 101 bits (251), Expect(2) = 1e-21
Identities = 79/335 (23%), Positives = 149/335 (44%), Gaps = 18/335 (5%)
Frame = -3
Query: 1430 KTYIISNGEVKWVNPMYPSAHPEKELVLKKYTIVKDVI--EGIQDKIQFNFIQFKDIEPQ 1257
K Y IS G +K N + + + E+ L + + V++ E + +FNF+ +++
Sbjct: 250 KVYFISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASNEEMFVPETKFNFVPIEELGLY 309
Query: 1256 FHKDDGINIYGIVTKVKDS-RVVTNSRGATKPLREITLMNQEYHPIVVSLWEDLAINEGY 1080
++ + I++ G+V V + + + P R+ITL ++ +VVSLW DLA G
Sbjct: 310 VNQKELIDLIGVVQSVSPTISIRRRTDNEMIPKRDITLADESKKTVVVSLWNDLATGIGQ 369
Query: 1079 VLHQIENEKTIVGITKLIAKRYYGEVQLQTTAASVLQIQPITEEIDHMRHWSLTIPHPVK 900
L + ++ ++ I L + G V L T + S + I P + E ++ W + +
Sbjct: 370 ELLDMADKSPVIAIKSLKVGDFQG-VSLSTISRSNVVINPESPEAKKLKSW-----YDSE 423
Query: 899 VLELSMKQRMKGVK-------------EVTLQQILHNRECLTE-DTYYCFKGFVEKVLNK 762
E SM G+ V L I N E ++ +G++ +
Sbjct: 424 GKETSMSSIGSGMSPSAKNGAWSMYTDRVLLSHITSNPSLGEEKPAFFSTRGYISFIKPD 483
Query: 761 PSLWYDSCQNCSASIFKN-DVNAPCKKCNLEDVETTPRYRLVLNVTQGNDNASVTIFEDA 585
++WY +C+ C+ + + D C+ C +D E + RY +V+ V+ A + F D
Sbjct: 484 QTMWYQACKTCNKKVTEAIDAGYWCEGCQKKDEECSLRYIMVVKVSDSTGEAWFSSFNDE 543
Query: 584 ATVYVGCPIEEYITSTKEGEQKSKYYRGLSLQEST 480
A +GC +E EG + +++ L+E+T
Sbjct: 544 AEKIIGCSADELNKLRSEGGEVNEFQ--TKLKEAT 576
Score = 30.8 bits (68), Expect(2) = 1e-21
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -2
Query: 1641 HPVVSVQILQINQKTFTLRLRVVRVGSEINC-GSNSSTRIHKMIMIDDEGVQIGVIMFND 1465
HP+VS L Q ++T+++RV G N + + + + D+EG QI MFND
Sbjct: 181 HPLVS---LNPYQGSWTIKVRVTNKGPMRNYRNARGEGCVFNVELTDEEGTQIQATMFND 237
>ref|XP_006374397.1| hypothetical protein POPTR_0015s06800g [Populus trichocarpa]
gi|550322159|gb|ERP52194.1| hypothetical protein
POPTR_0015s06800g [Populus trichocarpa]
Length = 603
Score = 109 bits (272), Expect = 4e-21
Identities = 80/333 (24%), Positives = 152/333 (45%), Gaps = 16/333 (4%)
Frame = -3
Query: 1430 KTYIISNGEVKWVNPMYPSAHPEKELVLKKYTIVKDVIEGIQ--DKIQFNFIQFKDIEPQ 1257
K Y IS G ++ N + + + E+ L + + V++ + + +F F+ + P
Sbjct: 227 KVYYISKGTLRVANKQFKTVQNDYEMTLNENSEVEEASDEAACIPETKFKFVPIDQLGPY 286
Query: 1256 FHKDDGINIYGIVTKVKDSRVVTN-SRGATKPLREITLMNQEYHPIVVSLWEDLAINEGY 1080
+ D +++ GIV V + + S T P R+I + ++ +VVSLW +LA + G
Sbjct: 287 VNSKDLVDVIGIVQSVSPTTSIRRKSNNETVPKRDIVVADETKKTVVVSLWNELATSVGQ 346
Query: 1079 VLHQIENEKTIVGITKLIAKRYYGEVQLQTTAASVLQIQPITEEIDHMRHW------SLT 918
LH I ++ +V I L + G + L T S++Q+ P+ E + +R+W +
Sbjct: 347 ELHDIADKSPVVAIKSLKVGDFQG-ISLSTLGKSIVQVNPVIAESEKLRNWYDSEGKETS 405
Query: 917 IPHPVKVLELSMKQRMKGV--KEVTLQQILHNRECLTED--TYYCFKGFVEKVLNKPSLW 750
+ L S K + + V+L I N L ED ++ + ++ + ++W
Sbjct: 406 MASVGSGLSPSTKSGARSMYSDRVSLSHITSN-PSLGEDKPAFFSIRAYISFIKPDQTMW 464
Query: 749 YDSCQNCSASIFKNDVNAP---CKKCNLEDVETTPRYRLVLNVTQGNDNASVTIFEDAAT 579
Y +C+ C+ + D C+ C D E + RY +V+ V+ G+ V+ F + A
Sbjct: 465 YRACKTCNKKV--TDALGGGYWCEGCQKNDAECSLRYIMVVKVSDGSGEGWVSAFNEEAE 522
Query: 578 VYVGCPIEEYITSTKEGEQKSKYYRGLSLQEST 480
+GC +E + E+ + R L+E+T
Sbjct: 523 KIIGCSADELDLLKSQIEENTYQQR---LKEAT 552
>ref|XP_002328669.1| predicted protein [Populus trichocarpa]
Length = 603
Score = 109 bits (272), Expect = 4e-21
Identities = 80/333 (24%), Positives = 152/333 (45%), Gaps = 16/333 (4%)
Frame = -3
Query: 1430 KTYIISNGEVKWVNPMYPSAHPEKELVLKKYTIVKDVIEGIQ--DKIQFNFIQFKDIEPQ 1257
K Y IS G ++ N + + + E+ L + + V++ + + +F F+ + P
Sbjct: 227 KVYYISKGTLRVANKQFKTVQNDYEMTLNENSEVEEASDEAACIPETKFKFVPIDQLGPY 286
Query: 1256 FHKDDGINIYGIVTKVKDSRVVTN-SRGATKPLREITLMNQEYHPIVVSLWEDLAINEGY 1080
+ D +++ GIV V + + S T P R+I + ++ +VVSLW +LA + G
Sbjct: 287 VNSKDLVDVIGIVQSVSPTTSIRRKSNNETVPKRDIVVADETKKTVVVSLWNELATSVGQ 346
Query: 1079 VLHQIENEKTIVGITKLIAKRYYGEVQLQTTAASVLQIQPITEEIDHMRHW------SLT 918
LH I ++ +V I L + G + L T S++Q+ P+ E + +R+W +
Sbjct: 347 ELHDIADKSPVVAIKSLKVGDFQG-ISLSTLGKSIVQVNPVIAESEKLRNWYDSEGKETS 405
Query: 917 IPHPVKVLELSMKQRMKGV--KEVTLQQILHNRECLTED--TYYCFKGFVEKVLNKPSLW 750
+ L S K + + V+L I N L ED ++ + ++ + ++W
Sbjct: 406 MASVGSGLSPSTKSGARSMYSDRVSLSHITSN-PSLGEDKPAFFSIRAYISFIKPDQTMW 464
Query: 749 YDSCQNCSASIFKNDVNAP---CKKCNLEDVETTPRYRLVLNVTQGNDNASVTIFEDAAT 579
Y +C+ C+ + D C+ C D E + RY +V+ V+ G+ V+ F + A
Sbjct: 465 YRACKTCNKKV--TDALGGGYWCEGCQKNDAECSLRYIMVVKVSDGSGEGWVSAFNEEAE 522
Query: 578 VYVGCPIEEYITSTKEGEQKSKYYRGLSLQEST 480
+GC +E + E+ + R L+E+T
Sbjct: 523 KIIGCSADELDLLKSQIEENTYQQR---LKEAT 552
>gb|EOY22080.1| Replication protein A 70 kDa DNA-binding subunit [Theobroma cacao]
Length = 677
Score = 107 bits (268), Expect = 1e-20
Identities = 88/341 (25%), Positives = 159/341 (46%), Gaps = 15/341 (4%)
Frame = -3
Query: 1430 KTYIISNGEVKWVNPMYPSAHPEKELVLKKYTIVKDVI--EGIQDKIQFNFIQFKDIEPQ 1257
K Y IS G +K N + + + E+ L + ++V++ + E + +FNFI + P
Sbjct: 301 KVYYISKGTLKVANKQFKTLQNDYEMTLNESSVVEEAVNEETFIPETKFNFIPIDQLGPY 360
Query: 1256 FHKDDGINIYGIV---TKVKDSRVVTNSRGATKPLREITLMNQEYHPIVVSLWEDLAINE 1086
+ + ++I G+V T V + + ++ +K R++T+ ++ +VVSLW +LA N
Sbjct: 361 VNGRELVDIIGVVQSVTSVSNIKRKIDNENISK--RDMTVADETKRTVVVSLWNELANNA 418
Query: 1085 GYVLHQIENEKTIVGITKLIAKRYYGEVQLQTTAASVLQIQPITEEIDHMRHW--SLTIP 912
G L I ++ IV I L + G V L T S L I P E ++R W S
Sbjct: 419 GQELFDIADKSPIVAIKSLKVSDFQG-VSLSTLGKSTLLINPDMPEAKNLRSWYDSEGKG 477
Query: 911 HPVKVLELSMKQRMKGVK-----EVTLQQILHNRECLTE-DTYYCFKGFVEKVLNKPSLW 750
+ + + G + V+L I N E ++ K F+ + + ++W
Sbjct: 478 SSMASVGSGLSPSKSGARSMYTDRVSLSHITGNPSLGEEKPAFFSIKAFISLIRPEQAMW 537
Query: 749 YDSCQNCSASIFKNDVNAP-CKKCNLEDVETTPRYRLVLNVTQGNDNASVTIFEDAATVY 573
Y +C++C+ + + + C+ C D E + RY +V ++ + A V+ F + A
Sbjct: 538 YRACKSCNKKVTEAVGSGYWCEGCQKNDEECSLRYIMVSKISDASGEAWVSGFNEEAERI 597
Query: 572 VGCPIEEY-ITSTKEGEQKSKYYRGLSLQESTEF*FLFALN 453
VGCP +E +KEGE + + L+E+T LF ++
Sbjct: 598 VGCPADELDKLKSKEGEMNAYQQK---LKEATWVPHLFRVS 635
>ref|XP_006280119.1| hypothetical protein CARUB_v10026014mg, partial [Capsella rubella]
gi|482548823|gb|EOA13017.1| hypothetical protein
CARUB_v10026014mg, partial [Capsella rubella]
Length = 680
Score = 97.1 bits (240), Expect(2) = 2e-20
Identities = 86/393 (21%), Positives = 164/393 (41%), Gaps = 18/393 (4%)
Frame = -3
Query: 1430 KTYIISNGEVKWVNPMYPSAHPEKELVLKKYTIVKDVI--EGIQDKIQFNFIQFKDIEPQ 1257
K Y IS G +K N + + + E+ L + V++ E + +FNFI +D+
Sbjct: 302 KVYYISRGSLKLANKQFKTVQNDYEMTLNDNSEVEEASSEEMFIPETKFNFIPIEDLGLY 361
Query: 1256 FHKDDGINIYGIVTKVKDSRVVTN-SRGATKPLREITLMNQEYHPIVVSLWEDLAINEGY 1080
++ + I++ G+V V + + + P R+ITL ++ +VVSLW DLA G
Sbjct: 362 VNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADESKKTVVVSLWNDLATGIGQ 421
Query: 1079 VLHQIENEKTIVGITKLIAKRYYGEVQLQTTAASVLQIQPITEEIDHMRHWSLTIPHPVK 900
L + ++ ++ I L + G V L T + S + I P++ E ++ W +
Sbjct: 422 ELLDMADKSPVIAIKSLKVGDFQG-VSLSTISRSNVVINPVSPEAKKLKSW-----FDSE 475
Query: 899 VLELSMKQRMKGVKEVT-------------LQQILHNRECLTE-DTYYCFKGFVEKVLNK 762
E+SM G+ T L I N E ++ + +V +
Sbjct: 476 GKEISMSSIGSGMSPATKNGSRSMYTDRVLLSHITSNPSLGEEKPVFFSTRAYVSFIKPD 535
Query: 761 PSLWYDSCQNCSASIFKN-DVNAPCKKCNLEDVETTPRYRLVLNVTQGNDNASVTIFEDA 585
++WY +C+ C+ + + D C+ C + E + RY + + VT + ++ F D
Sbjct: 536 QTMWYQACKTCNKKVTEALDSGYWCEGCQKKYEECSLRYIMAVKVTDSSGETWISSFNDE 595
Query: 584 ATVYVGCPIEEYITSTKEGEQKSKYYRGLSLQESTEF*FLFALNRKVGLFKENLNVVADG 405
A +GC +E E + ++Y L + F ++ + ++ V G
Sbjct: 596 AEKILGCSADELNKLRSEEGEVNEYQTRLKEATWSSHVFRVSVTQNEYNGEKRQRVTVKG 655
Query: 404 IERIKYVVQDEPKEEMSIASIEPKDIENTHDAS 306
+ + + + A + +DI N + AS
Sbjct: 656 VAPVDFAAE---------ARLLLQDISNKNKAS 679
Score = 30.8 bits (68), Expect(2) = 2e-20
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -2
Query: 1641 HPVVSVQILQINQKTFTLRLRVVRVGSEINC-GSNSSTRIHKMIMIDDEGVQIGVIMFND 1465
HP+VS+ Q N +T+++RV G N + + + + D+EG QI MFND
Sbjct: 233 HPLVSLNPYQGN---WTIKVRVTNKGVMRNYKNARGEGCVFNVELTDEEGTQIQATMFND 289
>ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Cucumis sativus]
Length = 560
Score = 107 bits (266), Expect = 2e-20
Identities = 79/339 (23%), Positives = 155/339 (45%), Gaps = 13/339 (3%)
Frame = -3
Query: 1430 KTYIISNGEVKWVNPMYPSAHPEKELVLKKYTIVKDVIE--GIQDKIQFNFIQFKDIEPQ 1257
K Y +S G +K N + + + E+ L + V +V + ++NF++ + P
Sbjct: 184 KVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVKIDMLGPH 243
Query: 1256 FHKDDGINIYGIVTKVKDSRVVTNS-RGATKPLREITLMNQEYHPIVVSLWEDLAINEGY 1080
+ D +++ G+V V + + T P R++T+ ++ +V+SLW DLA G
Sbjct: 244 VNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQ 303
Query: 1079 VLHQIENEKTIVGITKLIAKRYYGEVQLQTTAASVLQIQPITEEIDHMRHW------SLT 918
L I ++ I+ + L + G V L T + S + I P +E +R W +++
Sbjct: 304 ELLDIADQSPIIALKYLRVGDFQG-VSLSTISRSSITINPDIKEAHDLRSWYDSEGKAVS 362
Query: 917 IPHPVKVLELSMKQRMKGV--KEVTLQQILHNRECLTE-DTYYCFKGFVEKVLNKPSLWY 747
+ L S K + + ++L IL N+ E T++ + +V + ++WY
Sbjct: 363 MSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKPDQTMWY 422
Query: 746 DSCQNCSASIFKNDVNAP-CKKCNLEDVETTPRYRLVLNVTQGNDNASVTIFEDAATVYV 570
+C+ C+ + + + C C D E + RY +V+ V+ + A V+ F + A +
Sbjct: 423 RACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEEAERIM 482
Query: 569 GCPIEEYITSTKEGEQKSKYYRGLSLQESTEF*FLFALN 453
GC +E + +++ Y L L+E+T LF ++
Sbjct: 483 GCSADELDQLKSQIGEENSYQ--LKLKEATWVPHLFRVS 519
>ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 603
Score = 107 bits (266), Expect = 2e-20
Identities = 79/339 (23%), Positives = 155/339 (45%), Gaps = 13/339 (3%)
Frame = -3
Query: 1430 KTYIISNGEVKWVNPMYPSAHPEKELVLKKYTIVKDVIE--GIQDKIQFNFIQFKDIEPQ 1257
K Y +S G +K N + + + E+ L + V +V + ++NF++ + P
Sbjct: 227 KVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVKIDMLGPH 286
Query: 1256 FHKDDGINIYGIVTKVKDSRVVTNS-RGATKPLREITLMNQEYHPIVVSLWEDLAINEGY 1080
+ D +++ G+V V + + T P R++T+ ++ +V+SLW DLA G
Sbjct: 287 VNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQ 346
Query: 1079 VLHQIENEKTIVGITKLIAKRYYGEVQLQTTAASVLQIQPITEEIDHMRHW------SLT 918
L I ++ I+ + L + G V L T + S + I P +E +R W +++
Sbjct: 347 ELLDIADQSPIIALKYLRVGDFQG-VSLSTISRSSITINPDIKEAHDLRSWYDSEGKAVS 405
Query: 917 IPHPVKVLELSMKQRMKGV--KEVTLQQILHNRECLTE-DTYYCFKGFVEKVLNKPSLWY 747
+ L S K + + ++L IL N+ E T++ + +V + ++WY
Sbjct: 406 MSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKPDQTMWY 465
Query: 746 DSCQNCSASIFKNDVNAP-CKKCNLEDVETTPRYRLVLNVTQGNDNASVTIFEDAATVYV 570
+C+ C+ + + + C C D E + RY +V+ V+ + A V+ F + A +
Sbjct: 466 RACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEEAERIM 525
Query: 569 GCPIEEYITSTKEGEQKSKYYRGLSLQESTEF*FLFALN 453
GC +E + +++ Y L L+E+T LF ++
Sbjct: 526 GCSADELDQLKSQIGEENSYQ--LKLKEATWVPHLFRVS 562
>ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arabidopsis lyrata subsp.
lyrata] gi|297312244|gb|EFH42668.1| hypothetical protein
ARALYDRAFT_496254 [Arabidopsis lyrata subsp. lyrata]
Length = 631
Score = 94.7 bits (234), Expect(2) = 9e-20
Identities = 74/330 (22%), Positives = 145/330 (43%), Gaps = 13/330 (3%)
Frame = -3
Query: 1430 KTYIISNGEVKWVNPMYPSAHPEKELVLKKYTIVKDVI--EGIQDKIQFNFIQFKDIEPQ 1257
K Y IS G +K N + + + E+ L + + V++ E + +FNF+ +++
Sbjct: 253 KVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASSEEMFIPETKFNFVPIEELGLY 312
Query: 1256 FHKDDGINIYGIVTKVKDSRVVTN-SRGATKPLREITLMNQEYHPIVVSLWEDLAINEGY 1080
++ + I++ G+V V + + + P R+ITL ++ +VVSLW DLA G
Sbjct: 313 VNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADESKKTVVVSLWNDLATGIGQ 372
Query: 1079 VLHQIENEKTIVGITKLIAKRYYGEVQLQTTAASVLQIQPITEEIDHMRHWSLTIPHPVK 900
L + ++ +V I L + G V L T + S + I P + E ++ W + +
Sbjct: 373 ELLDMADKSPVVAIKSLKVGDFQG-VSLSTISRSNVVINPESPEAKKLKSWFDSEGKEIS 431
Query: 899 VLELSM--------KQRMKGVKEVTLQQILHNRECLTE-DTYYCFKGFVEKVLNKPSLWY 747
+ + R V L I N E ++ + ++ + ++WY
Sbjct: 432 MSSIGSGMSPSSKNGSRSMYTDRVLLSHITSNPSLGEEKPVFFSTRAYISFIKPDQTMWY 491
Query: 746 DSCQNCSASIFKN-DVNAPCKKCNLEDVETTPRYRLVLNVTQGNDNASVTIFEDAATVYV 570
+C+ C+ + + D C+ C + E + RY + + VT + ++ F D A +
Sbjct: 492 QACKTCNKKVTEALDSGYWCEGCQKKYEECSLRYIMAVKVTDSSGETWISSFNDEAEKIL 551
Query: 569 GCPIEEYITSTKEGEQKSKYYRGLSLQEST 480
GC ++ EG + ++Y L+E+T
Sbjct: 552 GCSADDLNKLRSEGGEVNEYQ--TKLKEAT 579
Score = 30.8 bits (68), Expect(2) = 9e-20
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -2
Query: 1641 HPVVSVQILQINQKTFTLRLRVVRVGSEINC-GSNSSTRIHKMIMIDDEGVQIGVIMFND 1465
HP+VS+ Q N +T+++RV G N + + + + D+EG QI MFND
Sbjct: 184 HPLVSLNPYQGN---WTIKVRVTNKGVMRNYKNARGEGCVFNVELTDEEGTQIQATMFND 240
>ref|NP_200908.1| replication protein A 70 kDa DNA-binding subunit D [Arabidopsis
thaliana] gi|75171651|sp|Q9FME0.1|RFA1D_ARATH RecName:
Full=Replication protein A 70 kDa DNA-binding subunit D;
Short=AtRPA70D; AltName: Full=AtRPA1-4; AltName:
Full=Replication factor A protein 1D; AltName:
Full=Replication protein A 1D; Short=AtRPA1D
gi|10177323|dbj|BAB10649.1| replication protein A1
[Arabidopsis thaliana] gi|28393124|gb|AAO41995.1|
putative RNA helicase [Arabidopsis thaliana]
gi|332010026|gb|AED97409.1| Replication factor-A protein
1-like protein [Arabidopsis thaliana]
Length = 629
Score = 94.4 bits (233), Expect(2) = 1e-19
Identities = 75/335 (22%), Positives = 144/335 (42%), Gaps = 26/335 (7%)
Frame = -3
Query: 1430 KTYIISNGEVKWVNPMYPSAHPEKELVLKKYTIVKDVI--EGIQDKIQFNFIQFKDIEPQ 1257
K Y IS G +K N + + + E+ L + + V++ E + +FNF+ +++
Sbjct: 251 KVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASSEEMFIPETKFNFVPIEELGLY 310
Query: 1256 FHKDDGINIYGIVTKVKDSRVVTN-SRGATKPLREITLMNQEYHPIVVSLWEDLAINEGY 1080
++ + I++ G+V V + + + P R+ITL ++ +VVSLW DLA G
Sbjct: 311 VNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADESRKTVVVSLWNDLATGIGQ 370
Query: 1079 VLHQIENEKTIVGITKLIAKRYYGEVQLQTTAASVLQIQPITEEIDHMRHW------SLT 918
L + ++ ++ I L + G V L T + S + I P + E ++ W ++
Sbjct: 371 ELLDMADQSPVIAIKSLKVGDFQG-VSLSTISRSNVVINPESPEAKKLKSWFDSEGKEIS 429
Query: 917 IPHPVKVLELSMKQRMKGV--KEVTLQQILHNRECLTE-DTYYCFKGFVEKVLNKPSLWY 747
+ + S K + + V L I N E ++ + ++ + ++WY
Sbjct: 430 MSSIGSGMSPSAKNGSRSLYTDRVLLSHITSNPSLFEEKPVFFSTRAYISFIKPDQTMWY 489
Query: 746 DSCQNCSASIFKN-DVNAPCKKCNLEDVETTPRYRLVLNVTQGNDNASVTIFEDAATVYV 570
+C+ C+ + + D C+ C + E + RY + + VT + ++ F D A +
Sbjct: 490 QACKTCNKKVTEALDSGYWCEGCQRKYEECSLRYIMAVKVTDSSGETWISSFNDEAEKIL 549
Query: 569 GC-------------PIEEYITSTKEGEQKSKYYR 504
GC + EY T KE S +R
Sbjct: 550 GCSADELNKLKSEEGEVNEYQTKLKEATWSSHVFR 584
Score = 30.8 bits (68), Expect(2) = 1e-19
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -2
Query: 1641 HPVVSVQILQINQKTFTLRLRVVRVGSEINC-GSNSSTRIHKMIMIDDEGVQIGVIMFND 1465
HP+VS+ Q N +T+++RV G N + + + + D+EG QI MFND
Sbjct: 182 HPLVSLNPYQGN---WTIKVRVTNKGVMRNYKNARGEGCVFNVELTDEEGTQIQATMFND 238
>gb|EXC04889.1| Replication factor A protein 1 [Morus notabilis]
Length = 628
Score = 104 bits (259), Expect = 1e-19
Identities = 80/340 (23%), Positives = 155/340 (45%), Gaps = 14/340 (4%)
Frame = -3
Query: 1430 KTYIISNGEVKWVNPMYPSAHPEKELVLKKYTIVKDVIE--GIQDKIQFNFIQFKDIEPQ 1257
K Y IS G +K N + + + E+ L + + V++ + +FNF+ + + P
Sbjct: 252 KVYYISKGTLKVANKQFKTVQNDYEMTLNENSEVEEASNEAAFVPETKFNFVPIEMLGPY 311
Query: 1256 FHKDDGINIYGIVTKVKDSRVVTN-SRGATKPLREITLMNQEYHPIVVSLWEDLAINEGY 1080
+ + +++ G+V V + + S P R+IT+ ++ +VVSLW DLA N G
Sbjct: 312 VNGKELVDVIGVVQSVSPTMSIRRKSNNENIPKRDITIADESKKTVVVSLWNDLATNVGQ 371
Query: 1079 VLHQIENEKTIVGITKLIAKRYYGEVQLQTTAASVLQIQPITEEIDHMRHW--SLTIPHP 906
L I ++ +V I + + G + L + S++ + P T E + ++ W S P
Sbjct: 372 ELLDIADQSPVVAIKSVKVGDFQG-LSLSALSRSMVVVNPDTPEANKLKSWYDSEGKGSP 430
Query: 905 VKVLELSMKQ------RMKGVKEVTLQQILHNRECLTED--TYYCFKGFVEKVLNKPSLW 750
+ + M R V L I N L ED ++ +G++ + ++W
Sbjct: 431 MASVGTGMSPSTRSGGRSMYSDRVFLSHITDN-PSLGEDKPAFFSIRGYISSIKPDQTMW 489
Query: 749 YDSCQNCSASIFKNDVNAP-CKKCNLEDVETTPRYRLVLNVTQGNDNASVTIFEDAATVY 573
Y +C+ C+ + + + C+ C D E + RY LV+ V+ + A ++ F + A
Sbjct: 490 YRACKTCNKKVTEAIGSGYWCEGCQKNDEECSLRYILVVRVSDASGEAYISAFNEEAESI 549
Query: 572 VGCPIEEYITSTKEGEQKSKYYRGLSLQESTEF*FLFALN 453
+GC +E + +++ Y + L+E+T LF ++
Sbjct: 550 IGCSADELDKLRSQLGEENSY--EMKLKEATWVPHLFRIS 587
>ref|XP_006287282.1| hypothetical protein CARUB_v10000503mg [Capsella rubella]
gi|482555988|gb|EOA20180.1| hypothetical protein
CARUB_v10000503mg [Capsella rubella]
Length = 607
Score = 97.8 bits (242), Expect(2) = 2e-19
Identities = 77/321 (23%), Positives = 140/321 (43%), Gaps = 19/321 (5%)
Frame = -3
Query: 1430 KTYIISNGEVKWVNPMYPSAHPEKELVLKKYTIVKDVI--EGIQDKIQFNFIQFKDIEPQ 1257
K Y IS G +K N + + + E+ L + + V++ E +I+FNF+ ++
Sbjct: 230 KVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASNEEMFTPEIKFNFVPIDELGTY 289
Query: 1256 FHKDDGINIYGIVTKVKDSRVVTNSRGATK-PLREITLMNQEYHPIVVSLWEDLAINEGY 1080
++ D I++ G+V V + + P R+ITL ++ +VVSLW DLA G
Sbjct: 290 VNQKDLIDVIGVVQSVSPTMSIRRKNDNEMIPKRDITLADETKKTVVVSLWNDLATGIGQ 349
Query: 1079 VLHQIENEKTIVGITKLIAKRYYGEVQLQTTAASVLQIQPITEEIDHMRHWSLTIPHPVK 900
L + + ++ I L + G V L T + S + I P + E ++ W + +
Sbjct: 350 ELLDMADNHPVIAIKSLKVGDFQG-VSLSTISRSSVVINPDSPEATKLKSW-----YDSE 403
Query: 899 VLELSMKQRMKGVK-------------EVTLQQILHNRECLTE-DTYYCFKGFVEKVLNK 762
E SM G+ V+L I N E ++ + ++ +
Sbjct: 404 GKETSMSTIGSGMSSSANNGSRSMYSDRVSLSHINSNPSLGEEKPVFFSTRAYISFIKPD 463
Query: 761 PSLWYDSCQNCSASIFK-NDVNAPCKKCNLEDVETTPRYRLVLNVTQGNDNASVTIFEDA 585
++WY +C+ C+ + + D C+ C +D E + RY + + V+ + F D
Sbjct: 464 QTMWYRACKTCNKKVTEAMDSGYWCEGCQKKDQECSLRYIMAVKVSDSMGETWFSAFNDE 523
Query: 584 ATVYVGCPIEEY-ITSTKEGE 525
A +GC +E I ++EGE
Sbjct: 524 AEKIIGCTADELNILKSEEGE 544
Score = 26.9 bits (58), Expect(2) = 2e-19
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = -2
Query: 1641 HPVVSVQILQINQKTFTLRLRVVRVG-SEINCGSNSSTRIHKMIMIDDEGVQIGVIMFND 1465
HP+VS L Q ++T+++RV G + + + + D+EG QI MFN
Sbjct: 161 HPLVS---LNPYQGSWTIKVRVTNKGVMRTYNNARGEGCVFNVELTDEEGTQIQATMFNA 217
Query: 1464 DVNYLATK*TQQDVY 1420
+ Q VY
Sbjct: 218 AAKKFYDRFEQGKVY 232
>ref|XP_002871302.1| hypothetical protein ARALYDRAFT_325405 [Arabidopsis lyrata subsp.
lyrata] gi|297317139|gb|EFH47561.1| hypothetical protein
ARALYDRAFT_325405 [Arabidopsis lyrata subsp. lyrata]
Length = 604
Score = 97.1 bits (240), Expect(2) = 2e-19
Identities = 76/321 (23%), Positives = 139/321 (43%), Gaps = 19/321 (5%)
Frame = -3
Query: 1430 KTYIISNGEVKWVNPMYPSAHPEKELVLKKYTIVKDVI--EGIQDKIQFNFIQFKDIEPQ 1257
K Y IS G +K N + + + E+ L + + V++ E +I+FNF+ ++
Sbjct: 227 KVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASNEEMFTPEIKFNFVPIDELGTY 286
Query: 1256 FHKDDGINIYGIVTKVKDSRVVTNSRGATK-PLREITLMNQEYHPIVVSLWEDLAINEGY 1080
++ D I++ G+V V + + P R+ITL ++ + +VVSLW DLA G
Sbjct: 287 VNQKDLIDVIGVVQCVSPTMSIRRKNDNEMIPKRDITLADESKNTVVVSLWNDLATGIGQ 346
Query: 1079 VLHQIENEKTIVGITKLIAKRYYGEVQLQTTAASVLQIQPITEEIDHMRHWSLTIPHPVK 900
L + + ++ I L + G V L T + S + I P + E ++ W + +
Sbjct: 347 ELLDMADNHPVIAIKSLKVGDFQG-VSLSTISRSNVVINPDSPEAKKLKSW-----YDAE 400
Query: 899 VLELSMKQRMKGVK-------------EVTLQQILHNRECLTE-DTYYCFKGFVEKVLNK 762
E SM G+ V L I N E ++ + ++ +
Sbjct: 401 GKETSMSAIGSGMSSSANNGSRSMYSDRVFLSHITSNPSLGEEKPVFFSIRAYISFIKPD 460
Query: 761 PSLWYDSCQNCSASIFK-NDVNAPCKKCNLEDVETTPRYRLVLNVTQGNDNASVTIFEDA 585
++WY +C+ C+ + + D C+ C +D E + RY + + V+ + F D
Sbjct: 461 QTMWYRACKTCNKKVTEAMDSGYWCEGCQKKDQECSLRYIMAVKVSDSTGETWFSAFNDE 520
Query: 584 ATVYVGCPIEEYIT-STKEGE 525
A +GC +E ++EGE
Sbjct: 521 AEKIIGCTADELNNLKSEEGE 541
Score = 27.7 bits (60), Expect(2) = 2e-19
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 1641 HPVVSVQILQINQKTFTLRLRVVRVG-SEINCGSNSSTRIHKMIMIDDEGVQIGVIMFN 1468
HP+VS L Q ++T+R+RV G + + + + D+EG QI MFN
Sbjct: 158 HPLVS---LNPYQGSWTIRVRVTNKGVMRTYNNARGEGCVFNVELTDEEGTQIQATMFN 213
>ref|XP_006600581.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit D-like
[Glycine max]
Length = 619
Score = 103 bits (256), Expect = 3e-19
Identities = 77/344 (22%), Positives = 157/344 (45%), Gaps = 18/344 (5%)
Frame = -3
Query: 1430 KTYIISNGEVKWVNPMYPSAHPEKELVLKKYTIVKDVI--EGIQDKIQFNFIQFKDIEPQ 1257
+ Y IS G +K N + + + E+ L + + V++V + +FNF+Q + P
Sbjct: 244 RVYYISKGTLKVANKQFKTVQNDYEMTLNENSEVEEVAGEASFVPETKFNFVQIDQLGPH 303
Query: 1256 FHKDDGINIYGIVTKVKDSRVVTN-SRGATKPLREITLMNQEYHPIVVSLWEDLAINEGY 1080
+K + +++ GIV V + + S + P R+IT+ + +VVSLW +LA G
Sbjct: 304 VNKSELVDVIGIVKNVSSTMTIRRKSDNESIPKRDITIADDTKKTVVVSLWNELATTTGQ 363
Query: 1079 VLHQIENEKTIVGITKLIAKRYYGEVQLQTTAASVLQIQPITEEIDHMRHWSLTIPHPVK 900
L I ++ +V I L + G V L T SV+ + P+ E ++R W + +
Sbjct: 364 ELLDIVDKSPVVAIKSLKVGDFQG-VSLSTIGKSVVLVNPVIPEAKNLRSW-----YDFE 417
Query: 899 VLELSMKQRMKGVKEVT---LQQILHNRECLTEDT-----------YYCFKGFVEKVLNK 762
+ +M G + ++ + +R L++ T ++ +G + +
Sbjct: 418 GKDAAMDSVGSGSSPTSNNGIRSVYTDRVLLSDITSNPSLGDGKPAFFSLRGHISFIKPD 477
Query: 761 PSLWYDSCQNCSASIFKN-DVNAPCKKCNLEDVETTPRYRLVLNVTQGNDNASVTIFEDA 585
++WY +C+ C+ + ++ C C D + + RY +V V+ + ++ F
Sbjct: 478 QAMWYRACKTCNKKVTESVGSGYLCDGCQKSDEQCSLRYIMVAKVSDASAETYISAFNQE 537
Query: 584 ATVYVGCPIEEYITSTKEGEQKSKYYRGLSLQESTEF*FLFALN 453
A +GC ++ + + K E + Y+ ++L+E+T LF ++
Sbjct: 538 AEKIIGCSADD-LDNLKSQEGEVNPYQ-MTLKEATWAQHLFRVS 579
>ref|XP_004236053.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Solanum lycopersicum]
Length = 614
Score = 103 bits (256), Expect = 3e-19
Identities = 85/382 (22%), Positives = 167/382 (43%), Gaps = 13/382 (3%)
Frame = -3
Query: 1430 KTYIISNGEVKWVNPMYPSAHPEKELVLKKYTIVKDVI--EGIQDKIQFNFIQFKDIEPQ 1257
K Y IS G ++ N + + + E+ L + + V++ E +I+FNF+ ++ P
Sbjct: 238 KVYYISKGTLRVANKQFKTVQNDYEMTLNENSQVEEASNEEAFIPEIKFNFVPIDELGPY 297
Query: 1256 FHKDDGINIYGIVTKVKDSRVVTN-SRGATKPLREITLMNQEYHPIVVSLWEDLAINEGY 1080
+ + +++ G+V V + + S T P R+IT+ ++ +VVSLW DLA + G
Sbjct: 298 VNGRELVDVIGVVQSVSPTMSIRRKSNNETVPKRDITIADETKKTVVVSLWNDLATHVGQ 357
Query: 1079 VLHQIENEKTIVGITKLIAKRYYGEVQLQTTAASVLQIQPITEEIDHMRHWSLTIPHPVK 900
L + ++ +V I L + G + L + S + + P E +R W +
Sbjct: 358 ELLDMADKSPVVAIKSLKVGDFQG-LSLSALSKSNIVVNPDLPEAKKLRSWYDSEGKETS 416
Query: 899 VLELSMKQ--------RMKGVKEVTLQQILHNRECLTE-DTYYCFKGFVEKVLNKPSLWY 747
+ + R V+L I N E ++ K ++ + ++WY
Sbjct: 417 LASIGSGMSPSTKSGARSMYTDRVSLLHITSNLSLGEEKPVFFSLKAYISFIKPDQTMWY 476
Query: 746 DSCQNCSASIFKNDVNAP-CKKCNLEDVETTPRYRLVLNVTQGNDNASVTIFEDAATVYV 570
+C+ C+ + + + C+ C D E + RY + L V+ + A ++ F D A +
Sbjct: 477 RACKTCNKKVTEAFGSGYWCEGCQKNDAECSLRYIMALRVSDASGEAWLSTFNDQAEKIL 536
Query: 569 GCPIEEYITSTKEGEQKSKYYRGLSLQESTEF*FLFALNRKVGLFKENLNVVADGIERIK 390
GC +E + K E ++ Y + L+E+T LF +V + ++ N
Sbjct: 537 GCSADE-LDKLKSEEGETAYQ--MKLKEATWVPHLF----RVSVAQQEYN---------- 579
Query: 389 YVVQDEPKEEMSIASIEPKDIE 324
+E ++ +++ +I P D E
Sbjct: 580 ----NEKRQRITVRAIAPVDYE 597
>ref|NP_196419.1| RPA70-kDa subunit B [Arabidopsis thaliana]
gi|75337075|sp|Q9SD82.1|RFA1B_ARATH RecName:
Full=Replication protein A 70 kDa DNA-binding subunit B;
Short=AtRPA70B; AltName: Full=AtRPA1-5; AltName:
Full=Replication factor A protein 1B; AltName:
Full=Replication protein A 1B; Short=AtRPA1B
gi|6562316|emb|CAB62614.1| replication factor A-like
protein [Arabidopsis thaliana]
gi|332003852|gb|AED91235.1| RPA70-kDa subunit B
[Arabidopsis thaliana]
Length = 604
Score = 95.5 bits (236), Expect(2) = 1e-18
Identities = 80/347 (23%), Positives = 144/347 (41%), Gaps = 32/347 (9%)
Frame = -3
Query: 1430 KTYIISNGEVKWVNPMYPSAHPEKELVLKKYTIVKDVI--EGIQDKIQFNFIQFKDIEPQ 1257
K Y IS G +K N + + + E+ L + + V++ E + +FNF+ ++
Sbjct: 227 KVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASNEEMFTPETKFNFVPIDELGTY 286
Query: 1256 FHKDDGINIYGIVTKVKDSRVVTNSRGATK-PLREITLMNQEYHPIVVSLWEDLAINEGY 1080
++ D I++ G+V V + + P R+ITL ++ +VVSLW DLA G
Sbjct: 287 VNQKDLIDVIGVVQSVSPTMSIRRKNDNEMIPKRDITLADETKKTVVVSLWNDLATGIGQ 346
Query: 1079 VLHQIENEKTIVGITKLIAKRYYGEVQLQTTAASVLQIQPITEEIDHMRHWSLTIPHPVK 900
L + + ++ I L + G V L T + S + I P + E ++ W + +
Sbjct: 347 ELLDMADNHPVIAIKSLKVGAFQG-VSLSTISRSNVVINPNSPEATKLKSW-----YDAE 400
Query: 899 VLELSMKQRMKGVK-------------EVTLQQILHNRECLTE-DTYYCFKGFVEKVLNK 762
E SM G+ V L I N E ++ + ++ +
Sbjct: 401 GKETSMSAIGSGMSSSANNGSRSMYSDRVFLSHITSNPSLGEEKPVFFSTRAYISFIKPD 460
Query: 761 PSLWYDSCQNCSASIFK-NDVNAPCKKCNLEDVETTPRYRLVLNVTQGNDNASVTIFEDA 585
++WY +C+ C+ + + D C+ C +D E + RY + + V+ ++ F D
Sbjct: 461 QTMWYRACKTCNKKVTEAMDSGYWCESCQKKDQECSLRYIMAVKVSDSTGETWLSAFNDE 520
Query: 584 ATVYVGC-------------PIEEYITSTKEGEQKSKYYR-GLSLQE 486
A +GC + E+ T KE S +R +S QE
Sbjct: 521 AEKIIGCTADDLNDLKSEEGEVNEFQTKLKEATWSSHLFRISVSQQE 567
Score = 26.6 bits (57), Expect(2) = 1e-18
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 1641 HPVVSVQILQINQKTFTLRLRVVRVG-SEINCGSNSSTRIHKMIMIDDEGVQIGVIMFN 1468
HP+VS L Q ++T+++RV G + + + + D+EG QI MFN
Sbjct: 158 HPLVS---LNPYQGSWTIKVRVTNKGVMRTYKNARGEGCVFNVELTDEEGTQIQATMFN 213
>gb|AAB71836.1| replication protein A1 [Oryza sativa Indica Group]
gi|125542895|gb|EAY89034.1| hypothetical protein
OsI_10518 [Oryza sativa Indica Group]
Length = 630
Score = 101 bits (251), Expect = 1e-18
Identities = 77/340 (22%), Positives = 148/340 (43%), Gaps = 14/340 (4%)
Frame = -3
Query: 1430 KTYIISNGEVKWVNPMYPSAHPEKELVLKKYTIVKDVI-EGIQDKIQFNFIQFKDIEPQF 1254
K Y IS G ++ N + + H + E+ L + +V++ E +IQ+NF++ + P
Sbjct: 256 KVYYISKGSLRVANKQFKTVHNDYEMTLNENAVVEEAEGETFIPQIQYNFVKIDQLGPYV 315
Query: 1253 HKDDGINIYGIVTKVKDSRVVTNS-RGATKPLREITLMNQEYHPIVVSLWEDLAINEGYV 1077
+ +++ G+V V + V T P R+I + + + +SLW DLA G
Sbjct: 316 GGRELVDVIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSSKTVTISLWNDLATTTGQE 375
Query: 1076 LHQIENEKTIVGITKLIAKRYYGEVQLQTTAASVLQIQPITEEIDHMRHWSLTIPHPVKV 897
L + + I+ I L + G + L T S + + P E + +R W + +
Sbjct: 376 LLDMVDSAPIIAIKSLKVSDFQG-LSLSTVGRSTIVVNPDLPEAEQLRAWYDSEGKGTSM 434
Query: 896 LELSMKQ---RMKGVKEVTLQQILHNRECLTED--------TYYCFKGFVEKVLNKPSLW 750
+ R+ G + + ++ + +T D ++ ++ + ++W
Sbjct: 435 ASIGSDMGASRVGGARSMYSDRVFLSH--ITSDPNLGQDKPVFFSLNAYISLIKPDQTMW 492
Query: 749 YDSCQNCSASIFKNDVNAP-CKKCNLEDVETTPRYRLVLNVTQGNDNASVTIFEDAATVY 573
Y +C+ C+ + + + C+ C D E + RY +V+ V+ A +++F D A
Sbjct: 493 YRACKTCNKKVTEAMGSGYWCEGCQKNDAECSLRYIMVIKVSDPTGEAWLSLFNDQAERI 552
Query: 572 VGCPIEEYITSTKEGEQKSKYYRGLSLQESTEF*FLFALN 453
VGC +E KE E Y L L+E+T LF ++
Sbjct: 553 VGCSADELDRIRKE-EGDDSYL--LKLKEATWVPHLFRVS 589
>ref|NP_001049369.1| Os03g0214100 [Oryza sativa Japonica Group]
gi|122247374|sp|Q10Q08.1|RFA1B_ORYSJ RecName:
Full=Replication protein A 70 kDa DNA-binding subunit B;
Short=OsRPA70b; AltName: Full=Replication factor A
protein 1B; AltName: Full=Replication protein A 1B
gi|108706832|gb|ABF94627.1| replication factor-a protein
1 containing protein, expressed [Oryza sativa Japonica
Group] gi|113547840|dbj|BAF11283.1| Os03g0214100 [Oryza
sativa Japonica Group] gi|125585388|gb|EAZ26052.1|
hypothetical protein OsJ_09906 [Oryza sativa Japonica
Group]
Length = 630
Score = 101 bits (251), Expect = 1e-18
Identities = 77/340 (22%), Positives = 148/340 (43%), Gaps = 14/340 (4%)
Frame = -3
Query: 1430 KTYIISNGEVKWVNPMYPSAHPEKELVLKKYTIVKDVI-EGIQDKIQFNFIQFKDIEPQF 1254
K Y IS G ++ N + + H + E+ L + +V++ E +IQ+NF++ + P
Sbjct: 256 KVYYISKGSLRVANKQFKTVHNDYEMTLNENAVVEEAEGETFIPQIQYNFVKIDQLGPYV 315
Query: 1253 HKDDGINIYGIVTKVKDSRVVTNS-RGATKPLREITLMNQEYHPIVVSLWEDLAINEGYV 1077
+ +++ G+V V + V T P R+I + + + +SLW DLA G
Sbjct: 316 GGRELVDVIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSSKTVTISLWNDLATTTGQE 375
Query: 1076 LHQIENEKTIVGITKLIAKRYYGEVQLQTTAASVLQIQPITEEIDHMRHWSLTIPHPVKV 897
L + + I+ I L + G + L T S + + P E + +R W + +
Sbjct: 376 LLDMVDSAPIIAIKSLKVSDFQG-LSLSTVGRSTIVVNPDLPEAEQLRAWYDSEGKGTSM 434
Query: 896 LELSMKQ---RMKGVKEVTLQQILHNRECLTED--------TYYCFKGFVEKVLNKPSLW 750
+ R+ G + + ++ + +T D ++ ++ + ++W
Sbjct: 435 ASIGSDMGASRVGGARSMYSDRVFLSH--ITSDPNLGQDKPVFFSLNAYISLIKPDQTMW 492
Query: 749 YDSCQNCSASIFKNDVNAP-CKKCNLEDVETTPRYRLVLNVTQGNDNASVTIFEDAATVY 573
Y +C+ C+ + + + C+ C D E + RY +V+ V+ A +++F D A
Sbjct: 493 YRACKTCNKKVTEAIGSGYWCEGCQKNDAECSLRYIMVIKVSDPTGEAWLSLFNDQAERI 552
Query: 572 VGCPIEEYITSTKEGEQKSKYYRGLSLQESTEF*FLFALN 453
VGC +E KE E Y L L+E+T LF ++
Sbjct: 553 VGCSADELDRIRKE-EGDDSYL--LKLKEATWVPHLFRVS 589