BLASTX nr result
ID: Rehmannia26_contig00003841
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia26_contig00003841 (3356 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata] 1141 0.0 dbj|BAG31377.1| topoisomerase I [Catharanthus roseus] 1129 0.0 dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata] 1122 0.0 dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica] 1119 0.0 dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata] 1115 0.0 dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g... 1112 0.0 dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana] 1099 0.0 dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila] 1098 0.0 dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa] 1097 0.0 dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis] 1096 0.0 gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma ca... 1087 0.0 dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea] 1082 0.0 dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35] 1082 0.0 ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 1074 0.0 dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana] 1070 0.0 gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|g... 1038 0.0 ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis... 1025 0.0 ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform ... 1016 0.0 ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citr... 1015 0.0 ref|XP_002300344.1| DNA topoisomerase family protein [Populus tr... 1006 0.0 >dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata] Length = 894 Score = 1141 bits (2952), Expect = 0.0 Identities = 600/903 (66%), Positives = 675/903 (74%), Gaps = 10/903 (1%) Frame = +1 Query: 241 MAVEACDKQKLXXXXXXXXXPLVFKRXXXXXXXXXXXXEAKKSLSQKHDRQLGRPAPDVR 420 MAV+AC K+K+ PLVFKR + KKS SQ++D Q GR DV Sbjct: 1 MAVQACVKEKMMDEIDEDDEPLVFKRSNATSKHNQLNSDTKKS-SQRYDGQSGRQVSDVP 59 Query: 421 SQNGQSTIVKKSKTVPLSKTPPVKYPLTSPKSSNTSGKALALKSPEVDSKPSTSVTDKSN 600 S NGQS+ K KT LS +K P+ SPK+S + KA + +P+V S S+ K + Sbjct: 60 STNGQSSSASKGKTTKLSS---MKSPIASPKASTSFAKASPVANPKVSS--SSDDRSKHS 114 Query: 601 SVKHQIKDEKLSTEATGEPNEDSQDSEDDKPLSARLPAGLSKVNSNHAKKSPNTSTLSQK 780 S ++ I K E E DSED+KPLSARL GL+K +SN+A K S+ + Sbjct: 115 SKQNTINVVKEEKELVNPAAEPYGDSEDEKPLSARLFTGLTKGSSNNANKGLINSSPAS- 173 Query: 781 RRIPIP--------EDSDDEIPLSSKFQVKSNAGESINRSSNSGERKPLLSKYDQNGSAS 936 +P+P +DSDDEIPLSSKF++K+NAG S +S S + K L+S + QNGS + Sbjct: 174 --LPVPKPEINRYSDDSDDEIPLSSKFRLKANAGTSTVKSYESDDNKTLVSNFQQNGSIN 231 Query: 937 TERKPSTNLKKRPGDGVKTTDESYLKKPKLSEAATPHKNKEASIKAEMREED-DEDHVPI 1113 K S + KRP VK++ +S +KKPKLS+A+TP NK+AS KAE + +D D+DHVPI Sbjct: 232 RGSKSSIKVNKRPLGEVKSSVQSSVKKPKLSDASTPVNNKQASKKAEPKADDSDDDHVPI 291 Query: 1114 SHRMXXXXXXXXXXXXXXN-ITKPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGQK 1290 S RM +TK + GEG+K Sbjct: 292 SQRMKKSATSGNKSSTAKQKVTKVVSSSMKKASKKFKKVVKKSKYSKSSKVPPSSGEGKK 351 Query: 1291 WTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVMLETDYMNKPKFKENF 1470 W TLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATM+AVML+TDYM K KFKENF Sbjct: 352 WNTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMTKSKFKENF 411 Query: 1471 MADWRKILGKNHTIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMW 1650 M DWRKILGKNH IQ+LE CDFTPIYEWH YMW Sbjct: 412 MDDWRKILGKNHVIQNLEDCDFTPIYEWHQREKEKKKKMTAEEKKVLKEERLKQEEKYMW 471 Query: 1651 AIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGE 1830 AIVNGVKEKVGNFRVEPP LFRGRGEHPKMGKLKK IRPSDITINIGKDAPIPECPIPGE Sbjct: 472 AIVNGVKEKVGNFRVEPPSLFRGRGEHPKMGKLKKCIRPSDITINIGKDAPIPECPIPGE 531 Query: 1831 SWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYILGIR 2010 SWKEIRHDNTVTWLA+WNDPI P+EFKYVFLAASS+LKGQSDKEKYEKARLLKD+I GIR Sbjct: 532 SWKEIRHDNTVTWLAFWNDPIKPREFKYVFLAASSSLKGQSDKEKYEKARLLKDFIQGIR 591 Query: 2011 AAYTKDFTSKDPAKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNT 2190 AAYTKDF SKD KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEP PP+ Sbjct: 592 AAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPKPPSI 651 Query: 2191 LKFDFLGKDSIRYQNEVEVETAVFKAIQQFRSGKKGGDDLFDRLDTSKLNAHLKELMPGL 2370 LKFDFLGKDSIRYQNEVEVE V+KAIQQFR+GK+GGDDLFD+LDTSKLNAHLK LMPGL Sbjct: 652 LKFDFLGKDSIRYQNEVEVELPVYKAIQQFRTGKRGGDDLFDKLDTSKLNAHLKGLMPGL 711 Query: 2371 TAKVFRTYNASITLDDMLSRETRGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQML 2550 TAKVFRTYNASITLD+MLSRET+GG+VAEK+VVYQHANKEVAIICNHQRTVSKSH AQM Sbjct: 712 TAKVFRTYNASITLDEMLSRETKGGNVAEKIVVYQHANKEVAIICNHQRTVSKSHPAQMT 771 Query: 2551 RLNEKIEELKGVVEELQTDLARAKKGKPPLKSADGKPKRNLNPDALERKIAQTTAKIEKM 2730 RLN KI+ELKG+++ LQTDLARAKKGKPPL+ ADGKPKRNL P+ALERKI QT AKIEKM Sbjct: 772 RLNGKIDELKGILDGLQTDLARAKKGKPPLEDADGKPKRNLTPEALERKIGQTNAKIEKM 831 Query: 2731 ERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPG 2910 ERDKETKE LKT+ALGTSKI+YLDPRITVAWCKRHEVPIEK+FNKSLLAKFAW+MDVDP Sbjct: 832 ERDKETKEGLKTIALGTSKISYLDPRITVAWCKRHEVPIEKVFNKSLLAKFAWSMDVDPS 891 Query: 2911 FRF 2919 FRF Sbjct: 892 FRF 894 >dbj|BAG31377.1| topoisomerase I [Catharanthus roseus] Length = 910 Score = 1129 bits (2921), Expect = 0.0 Identities = 600/919 (65%), Positives = 662/919 (72%), Gaps = 26/919 (2%) Frame = +1 Query: 241 MAVEACDKQKLXXXXXXXXXPLVFKRXXXXXXXXXXXXEAKKSLSQKHDRQLGRPAPDVR 420 MAVEAC L P+VFKR E +K SQK D Q R D R Sbjct: 1 MAVEACPTPNLRDDMDEDDEPIVFKRNNSASKQSQTNSETRKVSSQKRDGQSVRQIYDSR 60 Query: 421 SQNGQSTIVKKSKTVPLSK---------TPP-----VKYPLTSPKSSNTSGKALALKSPE 558 NG+S+ +K + VP SK +PP VK PL+SPK S +S K + S Sbjct: 61 PANGESSSGQKGRMVPPSKPSQVKSPLSSPPSKPSQVKSPLSSPKVSTSSAKKSPVSSLP 120 Query: 559 VDSKPSTSVTDKSNSVKHQ-----IKDEKLST-EATGEPNEDSQDSEDDKPLSARLPAGL 720 +SKPSTS + K IK+EK S DS+DS+D KPLS R A Sbjct: 121 ANSKPSTSGSFKVKPFNQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLRHSASS 180 Query: 721 SKVNSNHAKKSPNTSTLSQKRRIPIPEDSDDEIPLSSKFQVKSNAGESINRSSNSGERKP 900 SK N+N K + P EDSDDE PLSS+F +KS GES +++ +S + KP Sbjct: 181 SKGNTNQVSKEGSK---------PENEDSDDEKPLSSRFPLKSGVGESTSKAYDSDDDKP 231 Query: 901 LLSKYDQNGSASTERKP---STNLKKRPGDGVKTTDESYLKKPKLSEAATPHKNKEASIK 1071 L K NGSA + +P S KRP +K++++ +KKPKLS P K+AS+K Sbjct: 232 LAKKLQHNGSAMRDGQPNKYSNMSNKRPPGDIKSSNQLSVKKPKLSSVTAPTNKKQASVK 291 Query: 1072 AEMR-EEDDEDHVPISHRMXXXXXXXXXXXXXXNITKPIXXXXXXXXXXXXXXXXXXXXX 1248 E + E+DD+DH+PIS R+ TK + Sbjct: 292 PEPKAEDDDDDHLPISQRIKKSPTSESKSSSIKKTTKVVSSSVKKVNKKSKKVMKNSKYS 351 Query: 1249 XXXXXXXXXGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVML 1428 GEG+KW L HNGVIFPPPYKPHG+KMLYKGKPVDLTPEQEEVATM+AVML Sbjct: 352 KSSKVPPSSGEGKKWNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVML 411 Query: 1429 ETDYMNKPKFKENFMADWRKILGKNHTIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXX 1608 +TDYMNKP+FKENF DW+KILGKNH IQ+LE+CDF+PIYEWH Sbjct: 412 DTDYMNKPRFKENFFGDWKKILGKNHVIQNLENCDFSPIYEWHQSEKEKKKQMTTEEKKA 471 Query: 1609 XXXXXXXXXXXYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINI 1788 YMWA V+G KEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRP DITINI Sbjct: 472 LKEEKLKQEEKYMWAWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINI 531 Query: 1789 GKDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSTLKGQSDKEKY 1968 GKDAPIPECP+PGE WKE+RHDNTVTWLA+WNDPINPKEFKYVFLAASSTLKG SDKEKY Sbjct: 532 GKDAPIPECPVPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKY 591 Query: 1969 EKARLLKDYILGIRAAYTKDFTSKDPAKRQIAVATYLIDKLALRAGNEKDDDEADTVGCC 2148 EKARLLKDYI GIRAAYTKDF SKDP K+QIAVATYLIDKLALRAGNEKDDDEADTVGCC Sbjct: 592 EKARLLKDYIQGIRAAYTKDFASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCC 651 Query: 2149 TLKVENVEPVPPNTLKFDFLGKDSIRYQNEVEVETAVFKAIQQFRSGKKGGDDLFDRLDT 2328 TLKVENVEPVPPN LKFDFLGKDSIRYQNEVEVE AVFKAIQQFRSGK+G DLFD LDT Sbjct: 652 TLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDT 711 Query: 2329 SKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETRGGDVAEKVVVYQHANKEVAIICN 2508 SKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRET+GGDVAEKVVVYQHANKEVAIICN Sbjct: 712 SKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICN 771 Query: 2509 HQRTVSKSHSAQMLRLNEKIEELKGVVEELQTDLARAKKGKPPLKS--ADGKPKRNLNPD 2682 HQRTVSKSHSAQMLRLNEKIEELK VVEEL++DL+R KKGKPPLKS ADGKPKRNLNP+ Sbjct: 772 HQRTVSKSHSAQMLRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPE 831 Query: 2683 ALERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFN 2862 +LE+KIAQT AKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFN Sbjct: 832 SLEKKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFN 891 Query: 2863 KSLLAKFAWAMDVDPGFRF 2919 KSLLAKF WAMDVDP FRF Sbjct: 892 KSLLAKFTWAMDVDPSFRF 910 >dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata] Length = 925 Score = 1122 bits (2901), Expect = 0.0 Identities = 595/926 (64%), Positives = 664/926 (71%), Gaps = 33/926 (3%) Frame = +1 Query: 241 MAVEACDKQKLXXXXXXXXXPLVFKRXXXXXXXXXXXXEAKKSLSQKHDRQLGRPAPDVR 420 MAVEAC L P++FKR E KK QK D Q DVR Sbjct: 1 MAVEACTTN-LMEDMEDDGGPVIFKRSKPAPKQNQANSEKKKLSLQKQDGQSAVHTSDVR 59 Query: 421 SQNGQSTIVKKSKTVPLSKTPPVKYPLTSPKSSNTSGKALALKSPEVDSKPSTSVTDKSN 600 NG+S+ +K + P +KTPPVK PL+SPK+SN+S KA + SP +SKPS S T + Sbjct: 60 PANGESSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTAK 119 Query: 601 SVKHQIKD----EKLSTEATGEPNEDSQDSEDDKPLSARLPAGLSKVNSNHAKKSPNTST 768 H E + + N +S+ S+D+KPLSAR SK SNHA K S Sbjct: 120 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGDSC 179 Query: 769 LSQKRRIPIPEDSDDEIPLSSKFQVKSNAGESINRSSNSGERKPLLSKYDQNGSASTE-- 942 ++ I EDS+DE PLS +F KS+ GES ++S +S E+KPL +K QNGSAS + Sbjct: 180 SIRRPVIEESEDSEDEKPLSCRFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGP 239 Query: 943 -RKPSTNLKKRPGDGVKTTDESYLKKPKLSEAATPHKNKEASIKAEMREEDDE------- 1098 K ++ KRP K+ ++S +KKPKLS T NK+A++K E + EDD+ Sbjct: 240 MNKSASLSNKRPPGEAKSLNQSSVKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQ 299 Query: 1099 -----------------DHVPISHRMXXXXXXXXXXXXXXN-ITKPIXXXXXXXXXXXXX 1224 D+VPIS R+ + + Sbjct: 300 RGKKSQSATSKPKDDDDDNVPISQRIKKSPASVSKSSVPVKKASTVVSSSLKKVNKNSKK 359 Query: 1225 XXXXXXXXXXXXXXXXXGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEV 1404 GEGQKWTTLVHNGVIFPPPYKPHGVKMLYK +P+ LTPEQEEV Sbjct: 360 VIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEV 419 Query: 1405 ATMYAVMLETDYMNKPKFKENFMADWRKILGKNHTIQSLEHCDFTPIYEWHXXXXXXXXX 1584 ATM+AVML+TDYMNKP FKENF +DW+KILGKNH IQ+LE CDF PIYEWH Sbjct: 420 ATMFAVMLDTDYMNKPCFKENFFSDWKKILGKNHMIQNLEDCDFGPIYEWHQQEKEKKKQ 479 Query: 1585 XXXXXXXXXXXXXXXXXXXYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR 1764 YMWAIV+GVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR Sbjct: 480 MTTEEKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR 539 Query: 1765 PSDITINIGKDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSTLK 1944 P DITINIGKDAPIPECPIPGE WKE+R+ NTVTWLAYWNDPIN KEFKYVFLAASSTLK Sbjct: 540 PRDITINIGKDAPIPECPIPGERWKEVRNGNTVTWLAYWNDPINQKEFKYVFLAASSTLK 599 Query: 1945 GQSDKEKYEKARLLKDYILGIRAAYTKDFTS-KDPAKRQIAVATYLIDKLALRAGNEKDD 2121 GQSDKEKYEKARLLKDYI GIRAAYTKDFT+ KDP K+QIAVATYLIDKLALRAGNEKDD Sbjct: 600 GQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDD 659 Query: 2122 DEADTVGCCTLKVENVEPVPPNTLKFDFLGKDSIRYQNEVEVETAVFKAIQQFRSGKKGG 2301 DEADTVGCCTLKVENVEPVPPN LKFDFLGKDSIRYQNEV+VE AVFKAIQQFRSGK+G Sbjct: 660 DEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGS 719 Query: 2302 DDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETRGGDVAEKVVVYQHA 2481 +DLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLS+ET+GG+VAE VVVYQHA Sbjct: 720 EDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGEVAENVVVYQHA 779 Query: 2482 NKEVAIICNHQRTVSKSHSAQMLRLNEKIEELKGVVEELQTDLARAKKGKPPLKSADGKP 2661 NKEVAIICNHQRTVSKSHSAQM RLNEKI+ELK +EEL+TDL+RAKKGKPP K ADGK Sbjct: 780 NKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPTKGADGKA 839 Query: 2662 KRNLNPDALERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEV 2841 KRNLNP+ALERKI QT AKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEV Sbjct: 840 KRNLNPEALERKITQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEV 899 Query: 2842 PIEKIFNKSLLAKFAWAMDVDPGFRF 2919 PIEKIFNKSLLAKFAW+MDVDP FRF Sbjct: 900 PIEKIFNKSLLAKFAWSMDVDPSFRF 925 >dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica] Length = 927 Score = 1119 bits (2895), Expect = 0.0 Identities = 591/928 (63%), Positives = 667/928 (71%), Gaps = 35/928 (3%) Frame = +1 Query: 241 MAVEACDKQKLXXXXXXXXXPLVFKRXXXXXXXXXXXXEAKKSLSQKHDRQLGRPAPDVR 420 MAVEAC L P++FKR E KK QKH Q DVR Sbjct: 1 MAVEACTPN-LMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 59 Query: 421 SQNGQSTIVKKSKTVPLSKTPPVKYPLTSPKSSNTSGKALALKSPEVDSKPSTSVTDKSN 600 NG+S+ +K + P +KTPPVK PL+SPK+SN+S KA + SP +SKPS S T + Sbjct: 60 PANGESSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTAK 119 Query: 601 SVKHQIKD----EKLSTEATGEPNEDSQDSEDDKPLSARLPAGLSKVNSNHAKKSPNTST 768 H E + + N +S+ S+D+KPLSAR SK SNHA K S Sbjct: 120 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGDSC 179 Query: 769 LSQKRRIPIPEDSDDEIPLSSKFQVKSNAGESINRSSNSGERKPLLSKYDQNGSASTE-- 942 ++R I EDS+DE PLS +F KS+ GES ++S +S E+KPL +K QNGS S + Sbjct: 180 SIRRRVIEESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSVSRDGP 239 Query: 943 -RKPSTNLKKRPGDGVKTTDESYLKKPKLSEAATPHKNKEASIKAEMR------------ 1083 K ++ KRP VK+ ++S +KKPKLS T NK+A++K E Sbjct: 240 MNKSASLSNKRPPGEVKSLNQSSVKKPKLSSPITSISNKQAAVKPEPEPKAEDDDDNIPL 299 Query: 1084 --------------EEDDEDHVPISHRMXXXXXXXXXXXXXXN-ITKPIXXXXXXXXXXX 1218 +++D+D+VPI+ R+ + + Sbjct: 300 SQRGKKSQAATSKPKDEDDDNVPIAQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKNS 359 Query: 1219 XXXXXXXXXXXXXXXXXXXGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQE 1398 GEGQKWTTLVHNGVIFPPPY PHGVKMLYK +P+ LTPEQE Sbjct: 360 KKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYNPHGVKMLYKRQPITLTPEQE 419 Query: 1399 EVATMYAVMLETDYMNKPKFKENFMADWRKILGKNHTIQSLEHCDFTPIYEWHXXXXXXX 1578 EVATM+AVML+TDYMNKP+FKENF +DW+K+LGKNHTIQ+LE CDF PIYEWH Sbjct: 420 EVATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKK 479 Query: 1579 XXXXXXXXXXXXXXXXXXXXXYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKR 1758 YMWAIV+GVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKR Sbjct: 480 KQMTTEEKKALKEDKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKR 539 Query: 1759 IRPSDITINIGKDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASST 1938 IRP DITINIGKDAPIPECPIPGE WKE+R+DNTVTWLA+W DPIN KEFKYVFLAASST Sbjct: 540 IRPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAFWIDPINQKEFKYVFLAASST 599 Query: 1939 LKGQSDKEKYEKARLLKDYILGIRAAYTKDFTS-KDPAKRQIAVATYLIDKLALRAGNEK 2115 LKGQSDKEKYEKARLLKDYI GIRAAYTKDFT+ KDP K+QIAVATYLIDKLALRAGNEK Sbjct: 600 LKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEK 659 Query: 2116 DDDEADTVGCCTLKVENVEPVPPNTLKFDFLGKDSIRYQNEVEVETAVFKAIQQFRSGKK 2295 DDDEADTVGCCTLKVENVEPVPPN LKFDFLGKDSIRYQNEV+VE AVFKAIQQFRSGK+ Sbjct: 660 DDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKE 719 Query: 2296 GGDDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETRGGDVAEKVVVYQ 2475 G +DLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLS+ET+GG+VAEKVVVYQ Sbjct: 720 GSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGEVAEKVVVYQ 779 Query: 2476 HANKEVAIICNHQRTVSKSHSAQMLRLNEKIEELKGVVEELQTDLARAKKGKPPLKSADG 2655 HANKEVAIICNHQRTVSKSHSAQM RLNEKI+ELK +EEL+TDL+R KKGKPP K ADG Sbjct: 780 HANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTAMEELKTDLSRVKKGKPPSKGADG 839 Query: 2656 KPKRNLNPDALERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRH 2835 KPKRNLNP+ALERK+AQ AKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRH Sbjct: 840 KPKRNLNPEALERKMAQINAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRH 899 Query: 2836 EVPIEKIFNKSLLAKFAWAMDVDPGFRF 2919 EVPIEKIFNKSLLAKFAW+MDVDP FRF Sbjct: 900 EVPIEKIFNKSLLAKFAWSMDVDPSFRF 927 >dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata] Length = 920 Score = 1115 bits (2883), Expect = 0.0 Identities = 590/919 (64%), Positives = 661/919 (71%), Gaps = 33/919 (3%) Frame = +1 Query: 241 MAVEACDKQKLXXXXXXXXXPLVFKRXXXXXXXXXXXXEAKKSLSQKHDRQLGRPAPDVR 420 MAVEAC L P++FKR E KK QKH Q DVR Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60 Query: 421 SQNGQSTIVKKSKTVPLSKTPPVKYPLTSPKSSNTSGKALALKSPEVDSKPSTSVTDKSN 600 NG+++ +K + P +KTPPVK PL+SPK+SN+S KA + SP +SKPS S T + Sbjct: 61 PANGENSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTAK 120 Query: 601 SVKHQIKD----EKLSTEATGEPNEDSQDSEDDKPLSARLPAGLSKVNSNHAKKSPNTST 768 H E + + N +S+ S+D+KPLSAR SK SNHA K S Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGDSC 180 Query: 769 LSQKRRIPIPEDSDDEIPLSSKFQVKSNAGESINRSSNSGERKPLLSKYDQNGSASTE-- 942 ++ I EDS+DE PLS +F KS+ GES ++S +S E+KPL +K NGSAS + Sbjct: 181 SIRRPVIEESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDSP 240 Query: 943 -RKPSTNLKKRPGDGVKTTDESYLKKPKLSEAATPHKNKEASIKAEMREEDDE------- 1098 K ++ KRP VK+ ++S LKKPKLS T NK+A++K E + EDD+ Sbjct: 241 MNKSASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQ 300 Query: 1099 -----------------DHVPISHRMXXXXXXXXXXXXXXN-ITKPIXXXXXXXXXXXXX 1224 D+VPIS R+ + + Sbjct: 301 RGKKSQTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKK 360 Query: 1225 XXXXXXXXXXXXXXXXXGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEV 1404 GEGQKWTTLVHNGVIFPPPYKPHGVKMLYK +P+ LTPEQEEV Sbjct: 361 VIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEV 420 Query: 1405 ATMYAVMLETDYMNKPKFKENFMADWRKILGKNHTIQSLEHCDFTPIYEWHXXXXXXXXX 1584 ATM+AVML+TDYMNKP+FKENF +DW+K+LGKNHTIQ+LE CDF PIYEWH Sbjct: 421 ATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQ 480 Query: 1585 XXXXXXXXXXXXXXXXXXXYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR 1764 YMWAIV+GVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR Sbjct: 481 MTTEEKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR 540 Query: 1765 PSDITINIGKDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSTLK 1944 P DITINIGKDAPIPECPIPGE WKE+R+DNTVTWLAYWNDPIN KEFKYVFLAASSTLK Sbjct: 541 PRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPINQKEFKYVFLAASSTLK 600 Query: 1945 GQSDKEKYEKARLLKDYILGIRAAYTKDFTS-KDPAKRQIAVATYLIDKLALRAGNEKDD 2121 GQSDKEKYEKARLLKDYI GIRAAYTKDFT+ KDP K+QIAVATYLIDKLALRAGNEKDD Sbjct: 601 GQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDD 660 Query: 2122 DEADTVGCCTLKVENVEPVPPNTLKFDFLGKDSIRYQNEVEVETAVFKAIQQFRSGKKGG 2301 DEADTVGCCTLKVENVEPVPPN LKFDFLGKDSIRYQNEV+VE AVFKAI QFRSGK+G Sbjct: 661 DEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIHQFRSGKEGS 720 Query: 2302 DDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETRGGDVAEKVVVYQHA 2481 +DLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLS++T GG+VAEKVVVYQHA Sbjct: 721 EDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKKTNGGEVAEKVVVYQHA 780 Query: 2482 NKEVAIICNHQRTVSKSHSAQMLRLNEKIEELKGVVEELQTDLARAKKGKPPLKSADGKP 2661 NKEVAIICNHQRTVSKSHSAQM RLNEKI+ELK +EEL+TDL+RAKKGKP K ADGKP Sbjct: 781 NKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPLSKGADGKP 840 Query: 2662 KRNLNPDALERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEV 2841 KRNLNP+ALERKIAQT AKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEV Sbjct: 841 KRNLNPEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEV 900 Query: 2842 PIEKIFNKSLLAKFAWAMD 2898 PIEKIFNKSLLAKFAWAM+ Sbjct: 901 PIEKIFNKSLLAKFAWAMN 919 >dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra] Length = 920 Score = 1112 bits (2877), Expect = 0.0 Identities = 589/919 (64%), Positives = 661/919 (71%), Gaps = 33/919 (3%) Frame = +1 Query: 241 MAVEACDKQKLXXXXXXXXXPLVFKRXXXXXXXXXXXXEAKKSLSQKHDRQLGRPAPDVR 420 MAVEAC L P++FKR E KK Q+H Q DVR Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQRHVGQSAVHTSDVR 60 Query: 421 SQNGQSTIVKKSKTVPLSKTPPVKYPLTSPKSSNTSGKALALKSPEVDSKPSTSVTDKSN 600 NG+++ +K + P +KTPPVK PL+SPK+SN+S KA + S +SKPS S T + Sbjct: 61 PANGENSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSAGANSKPSASATSTAK 120 Query: 601 SVKHQIKD----EKLSTEATGEPNEDSQDSEDDKPLSARLPAGLSKVNSNHAKKSPNTST 768 H E + + N +S+ S+D+KPLSAR SK SNHA K S Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGDSC 180 Query: 769 LSQKRRIPIPEDSDDEIPLSSKFQVKSNAGESINRSSNSGERKPLLSKYDQNGSASTE-- 942 ++ I EDS+DE PLS +F KS+ GES ++S +S E+KPL +K NGSAS + Sbjct: 181 SIRRPVIEESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDSP 240 Query: 943 -RKPSTNLKKRPGDGVKTTDESYLKKPKLSEAATPHKNKEASIKAEMREEDDE------- 1098 K ++ KRP VK+ ++S LKKPKLS T NK+A++K E + EDD+ Sbjct: 241 MNKSASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQ 300 Query: 1099 -----------------DHVPISHRMXXXXXXXXXXXXXXN-ITKPIXXXXXXXXXXXXX 1224 D+VPIS R+ + + Sbjct: 301 RGKKSQTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKK 360 Query: 1225 XXXXXXXXXXXXXXXXXGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEV 1404 GEGQKWTTLVHNGVIFPPPYKPHGVKMLYK +P+ LTPEQEEV Sbjct: 361 VIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEV 420 Query: 1405 ATMYAVMLETDYMNKPKFKENFMADWRKILGKNHTIQSLEHCDFTPIYEWHXXXXXXXXX 1584 ATM+AVML+TDYMNKP+FKENF +DW+K+LGKNHTIQ+LE CDF PIYEWH Sbjct: 421 ATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQ 480 Query: 1585 XXXXXXXXXXXXXXXXXXXYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR 1764 YMWAIV+GVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR Sbjct: 481 MTTEEKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR 540 Query: 1765 PSDITINIGKDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSTLK 1944 P DITINIGKDAPIPECPIPGE WKE+R+DNTVTWLAYWNDPIN KEFKYVFLAASSTLK Sbjct: 541 PRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPINQKEFKYVFLAASSTLK 600 Query: 1945 GQSDKEKYEKARLLKDYILGIRAAYTKDFTS-KDPAKRQIAVATYLIDKLALRAGNEKDD 2121 GQSDKEKYEKARLLKDYI GIRAAYTKDFT+ KDP K+QIAVATYLIDKLALRAGNEKDD Sbjct: 601 GQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDD 660 Query: 2122 DEADTVGCCTLKVENVEPVPPNTLKFDFLGKDSIRYQNEVEVETAVFKAIQQFRSGKKGG 2301 DEADTVGCCTLKVENVEPVPPN LKFDFLGKDSIRYQNEV+VE AVFKAIQQFRSGK+G Sbjct: 661 DEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGS 720 Query: 2302 DDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETRGGDVAEKVVVYQHA 2481 +DLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLS++T GG+VAEKVVVYQHA Sbjct: 721 EDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKKTNGGEVAEKVVVYQHA 780 Query: 2482 NKEVAIICNHQRTVSKSHSAQMLRLNEKIEELKGVVEELQTDLARAKKGKPPLKSADGKP 2661 NKEVAIICNHQRTVSKSHSAQM RLNEKI+ELK +EEL+TDL+RAKKGKP K ADGKP Sbjct: 781 NKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPLSKGADGKP 840 Query: 2662 KRNLNPDALERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEV 2841 KRNLNP+ALERKIAQT AKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEV Sbjct: 841 KRNLNPEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEV 900 Query: 2842 PIEKIFNKSLLAKFAWAMD 2898 PIEKIFNKSLLAKFAWAM+ Sbjct: 901 PIEKIFNKSLLAKFAWAMN 919 >dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana] Length = 926 Score = 1099 bits (2842), Expect = 0.0 Identities = 581/927 (62%), Positives = 660/927 (71%), Gaps = 34/927 (3%) Frame = +1 Query: 241 MAVEACDKQKLXXXXXXXXXPLVFKRXXXXXXXXXXXXEAKKSLSQKHDRQLGRPAPDVR 420 MAVEAC L P++FKR E KK QKH Q DVR Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPTSKQNQANAEKKKLSLQKHVGQSAVHTSDVR 60 Query: 421 SQNGQSTIVKKSKTVPLSKTPPVKYPLTSPKSSNTSGKALALKSPEVDSKPSTSVTDKSN 600 NG+S+ +K + P ++TPPVK PL+SPK+SN+S KA + SP +SK S S T + Sbjct: 61 PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120 Query: 601 SVKHQIKD----EKLSTEATGEPNEDSQDSEDDKPLSARLPAGLSKVNSNHAKKSPNTST 768 H E + + N +S+ S+D+KPL AR S SNHA K S Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIARTSGCSSMGKSNHANKEGGDSC 180 Query: 769 LSQKRRIPIPEDSDDEIPLSSKFQVKSNAGESINRSSNSGERKPLLSKYDQNGSASTE-- 942 ++ I EDS+DE PLS +F KS+ GES ++S +S E+KPL +K QNGSAS E Sbjct: 181 SIRRPVIEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASPEGP 240 Query: 943 --RKPSTNLKKRPGDGVKTTDESYLKKPKLSEAATPHKNKEASIKAEMREEDDED----- 1101 + S + K+ PG+ VK+ ++S LKKPKLS T NK+A++K E + EDD+D Sbjct: 241 MNKSASLSNKRAPGE-VKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLS 299 Query: 1102 -------------------HVPISHRMXXXXXXXXXXXXXXN-ITKPIXXXXXXXXXXXX 1221 H PIS R+ + + Sbjct: 300 QRGKKSQTAASKPKDEDDDHAPISQRIKKSPVSVSKSSAPVKKASTVVSTSLKKVNKKSK 359 Query: 1222 XXXXXXXXXXXXXXXXXXGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEE 1401 GEGQKWTTLVHNGV+FPPPYKPHGVKMLYK +P+ LTPEQEE Sbjct: 360 KVIRKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFPPPYKPHGVKMLYKRQPLTLTPEQEE 419 Query: 1402 VATMYAVMLETDYMNKPKFKENFMADWRKILGKNHTIQSLEHCDFTPIYEWHXXXXXXXX 1581 VATM+AVML+TDYMNKP+FKENF +DW+KILGKNHTIQ+LE CDF PIYEWH Sbjct: 420 VATMFAVMLDTDYMNKPRFKENFFSDWKKILGKNHTIQNLEDCDFGPIYEWHQQEKEKKK 479 Query: 1582 XXXXXXXXXXXXXXXXXXXXYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 1761 YMWAIV+GVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRI Sbjct: 480 QMTTEEKKALKEERLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRI 539 Query: 1762 RPSDITINIGKDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSTL 1941 RP DITINIGKDAPIPECPIPGE WKE+R+DNTVTWLAYWNDP+N KE KYVFLAASSTL Sbjct: 540 RPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVNIKECKYVFLAASSTL 599 Query: 1942 KGQSDKEKYEKARLLKDYILGIRAAYTKDFTS-KDPAKRQIAVATYLIDKLALRAGNEKD 2118 KGQS KEKYEKAR+LKDYI GIRAAYTK FT+ KDP K+QIAVATYLIDKLALRAGNEKD Sbjct: 600 KGQSVKEKYEKARVLKDYIHGIRAAYTKGFTNNKDPMKKQIAVATYLIDKLALRAGNEKD 659 Query: 2119 DDEADTVGCCTLKVENVEPVPPNTLKFDFLGKDSIRYQNEVEVETAVFKAIQQFRSGKKG 2298 DDEADTVGCCTLKVENVEPVPPN LK DF+GKDSIRYQNEV+VE AVFKAIQQFRSGK+G Sbjct: 660 DDEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEG 719 Query: 2299 GDDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETRGGDVAEKVVVYQH 2478 +DLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLS+ET+GG +AEKV VYQH Sbjct: 720 SEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKIAEKVAVYQH 779 Query: 2479 ANKEVAIICNHQRTVSKSHSAQMLRLNEKIEELKGVVEELQTDLARAKKGKPPLKSADGK 2658 ANKEVAIICNHQRTVSKSHSAQM RLNEKI+ELK +EEL+TDL+RAKKGKPP K ADG+ Sbjct: 780 ANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPSKDADGE 839 Query: 2659 PKRNLNPDALERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHE 2838 PKRNLNP++LERKIAQT AKIEKMERDK+TKEDLK VAL TSKI+YLDPRITVAWCKR E Sbjct: 840 PKRNLNPESLERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRQE 899 Query: 2839 VPIEKIFNKSLLAKFAWAMDVDPGFRF 2919 VPIEK+FNKSLLAKFAWAMDVDP FRF Sbjct: 900 VPIEKMFNKSLLAKFAWAMDVDPSFRF 926 >dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila] Length = 926 Score = 1098 bits (2841), Expect = 0.0 Identities = 581/927 (62%), Positives = 660/927 (71%), Gaps = 34/927 (3%) Frame = +1 Query: 241 MAVEACDKQKLXXXXXXXXXPLVFKRXXXXXXXXXXXXEAKKSLSQKHDRQLGRPAPDVR 420 MAVEAC L P++FKR E KK QKH Q DVR Sbjct: 1 MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60 Query: 421 SQNGQSTIVKKSKTVPLSKTPPVKYPLTSPKSSNTSGKALALKSPEVDSKPSTSVTDKSN 600 NG+S+ +K + P ++TPPVK PL+SPK+SN+S KA + SP +SK S S T + Sbjct: 61 PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120 Query: 601 SVKHQIKD----EKLSTEATGEPNEDSQDSEDDKPLSARLPAGLSKVNSNHAKKSPNTST 768 H E + + N +S+ S+D+KPL AR SK SNHA K S Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGGDSC 180 Query: 769 LSQKRRIPIPEDSDDEIPLSSKFQVKSNAGESINRSSNSGERKPLLSKYDQNGSASTE-- 942 ++ I EDS+DE PLS +F KS+ GES ++S +S E+KPL +K QNGSAS + Sbjct: 181 SIRRPVIEESEDSEDEKPLSRRFPSKSSLGESTSKSHDSDEKKPLAAKVQQNGSASRDGP 240 Query: 943 --RKPSTNLKKRPGDGVKTTDESYLKKPKLSEAATPHKNKEASIKAEMREEDDE------ 1098 + S + K+ PG+ VK+ ++S LKKPKLS T NK+A++K E + EDD+ Sbjct: 241 MNKSASLSNKRAPGE-VKSLNQSSLKKPKLSSTITSISNKQAAVKPEPKAEDDDDNIPLS 299 Query: 1099 ------------------DHVPISHRMXXXXXXXXXXXXXXN-ITKPIXXXXXXXXXXXX 1221 D+ PIS R+ + + Sbjct: 300 QRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSK 359 Query: 1222 XXXXXXXXXXXXXXXXXXGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEE 1401 GEGQKWTTLVHNGV+FPPPYKPHGVKMLYK +P+ LTPEQEE Sbjct: 360 KVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFPPPYKPHGVKMLYKRQPLTLTPEQEE 419 Query: 1402 VATMYAVMLETDYMNKPKFKENFMADWRKILGKNHTIQSLEHCDFTPIYEWHXXXXXXXX 1581 VATM+A ML+TDYMNKP+FKENF +DW+KILGKNHTIQ+LE CDF PIYEWH Sbjct: 420 VATMFAAMLDTDYMNKPRFKENFFSDWKKILGKNHTIQNLEDCDFGPIYEWHQQEKEKKK 479 Query: 1582 XXXXXXXXXXXXXXXXXXXXYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 1761 YMWAIV+GVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRI Sbjct: 480 QMTTEEKKALKEERLQLEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRI 539 Query: 1762 RPSDITINIGKDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSTL 1941 RP DITINIGKDAPIPECPIPGE WKE+R+DNTVTWLAYWNDP+N KE KYVFLAASSTL Sbjct: 540 RPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVNLKECKYVFLAASSTL 599 Query: 1942 KGQSDKEKYEKARLLKDYILGIRAAYTKDFTS-KDPAKRQIAVATYLIDKLALRAGNEKD 2118 KGQSDKEKYEKARLLKDYI GIRAAYTKDFT+ KDP K+Q+AVATYLIDKLALRAGNEKD Sbjct: 600 KGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQVAVATYLIDKLALRAGNEKD 659 Query: 2119 DDEADTVGCCTLKVENVEPVPPNTLKFDFLGKDSIRYQNEVEVETAVFKAIQQFRSGKKG 2298 DDEADTVGCCTLKVENVEPVPPN LK DF+GKDSIRYQNEV+VE AVFKAIQQFRSGK+G Sbjct: 660 DDEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEG 719 Query: 2299 GDDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETRGGDVAEKVVVYQH 2478 +DLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLS+ET+GG VAEKV VYQ Sbjct: 720 SEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQR 779 Query: 2479 ANKEVAIICNHQRTVSKSHSAQMLRLNEKIEELKGVVEELQTDLARAKKGKPPLKSADGK 2658 ANKEVAIICNHQRTVSKSHSAQM RLNEKI+ELK +EEL+TDL+RAKKGKPP K DG+ Sbjct: 780 ANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPSKGDDGE 839 Query: 2659 PKRNLNPDALERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHE 2838 PKRNLNP+ALERKIAQT AKIEKMERDK+TKEDLK VAL TSKI+YLDPRITVAWCKR E Sbjct: 840 PKRNLNPEALERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRQE 899 Query: 2839 VPIEKIFNKSLLAKFAWAMDVDPGFRF 2919 VPIEK+FNKSLLAKFAWAMDVDP FRF Sbjct: 900 VPIEKMFNKSLLAKFAWAMDVDPSFRF 926 >dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa] Length = 926 Score = 1097 bits (2836), Expect = 0.0 Identities = 580/927 (62%), Positives = 659/927 (71%), Gaps = 34/927 (3%) Frame = +1 Query: 241 MAVEACDKQKLXXXXXXXXXPLVFKRXXXXXXXXXXXXEAKKSLSQKHDRQLGRPAPDVR 420 MAVEAC L P++FKR E KK QKH Q DVR Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60 Query: 421 SQNGQSTIVKKSKTVPLSKTPPVKYPLTSPKSSNTSGKALALKSPEVDSKPSTSVTDKSN 600 NG+S+ +K + P ++TPPVK PL+SPK+SN+S KA + SP +SK S S T + Sbjct: 61 PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120 Query: 601 SVKHQIKD----EKLSTEATGEPNEDSQDSEDDKPLSARLPAGLSKVNSNHAKKSPNTST 768 H E + + N +S+ S+D+KPL AR SK SNHA K S Sbjct: 121 QQNHHKSSAAFIEPKPSVPPAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGGDSC 180 Query: 769 LSQKRRIPIPEDSDDEIPLSSKFQVKSNAGESINRSSNSGERKPLLSKYDQNGSASTE-- 942 ++ + EDS+DE PLS +F KS+ GES ++S +S E+KPL +K QNGSAS + Sbjct: 181 SIRRPVVEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGP 240 Query: 943 --RKPSTNLKKRPGDGVKTTDESYLKKPKLSEAATPHKNKEASIKAEMREEDDE------ 1098 + S + K+ PG+ VK+ ++S LKKPKLS T NK+A++K E + EDD+ Sbjct: 241 MNKSASLSNKRAPGE-VKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLS 299 Query: 1099 ------------------DHVPISHRMXXXXXXXXXXXXXXN-ITKPIXXXXXXXXXXXX 1221 D+ PIS R+ + + Sbjct: 300 QRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSK 359 Query: 1222 XXXXXXXXXXXXXXXXXXGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEE 1401 GEGQKWTTLVHNGV+FPPPYKPHGVKMLYK +P+ LTPEQEE Sbjct: 360 KVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFPPPYKPHGVKMLYKRQPLTLTPEQEE 419 Query: 1402 VATMYAVMLETDYMNKPKFKENFMADWRKILGKNHTIQSLEHCDFTPIYEWHXXXXXXXX 1581 VATM+A ML+TDYMNKP+FKENF +DW+KILGKNHTIQ+LE CDF PIYEWH Sbjct: 420 VATMFAAMLDTDYMNKPRFKENFFSDWKKILGKNHTIQNLEDCDFGPIYEWHQQEREKKK 479 Query: 1582 XXXXXXXXXXXXXXXXXXXXYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 1761 YMWAIV+GVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRI Sbjct: 480 QMTTEEKKALKDERLQLEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRI 539 Query: 1762 RPSDITINIGKDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSTL 1941 P DITINIGKDAPIPECPIPGE WKE+R+DNTVTWLAYWNDP+N KE KYVFLA SSTL Sbjct: 540 HPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVNLKECKYVFLAPSSTL 599 Query: 1942 KGQSDKEKYEKARLLKDYILGIRAAYTKDFTS-KDPAKRQIAVATYLIDKLALRAGNEKD 2118 KGQSDKEKYEKARLLKDYI GIRAAYTKDFT+ KDP K+QIAVATYLIDKLALRAGNEKD Sbjct: 600 KGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKD 659 Query: 2119 DDEADTVGCCTLKVENVEPVPPNTLKFDFLGKDSIRYQNEVEVETAVFKAIQQFRSGKKG 2298 DDEADTVGCCTLKVENVEPVPPN LK DF+GKDSIRYQNEV+VE AVFKAIQQFRSGK+G Sbjct: 660 DDEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEG 719 Query: 2299 GDDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETRGGDVAEKVVVYQH 2478 +DLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLS+ET+GG VAEKV VYQH Sbjct: 720 SEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQH 779 Query: 2479 ANKEVAIICNHQRTVSKSHSAQMLRLNEKIEELKGVVEELQTDLARAKKGKPPLKSADGK 2658 ANKEVAIICNHQRTVSKSHSAQM RLNEKI+ELK +EEL+TDL+RAKKGKPP K DG+ Sbjct: 780 ANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPSKGDDGE 839 Query: 2659 PKRNLNPDALERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHE 2838 PKRNLNP+ALERKIAQT AKIEKMERDK+TKEDLK VAL TSKI+YLDPRITVAWCKR E Sbjct: 840 PKRNLNPEALERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRQE 899 Query: 2839 VPIEKIFNKSLLAKFAWAMDVDPGFRF 2919 VPIEK+FNKSLLAKFAWAMDVDP FRF Sbjct: 900 VPIEKMFNKSLLAKFAWAMDVDPSFRF 926 >dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis] Length = 926 Score = 1096 bits (2834), Expect = 0.0 Identities = 581/926 (62%), Positives = 658/926 (71%), Gaps = 33/926 (3%) Frame = +1 Query: 241 MAVEACDKQKLXXXXXXXXXPLVFKRXXXXXXXXXXXXEAKKSLSQKHDRQLGRPAPDVR 420 MAVEAC L P++FKR E KK QKH Q DVR Sbjct: 1 MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60 Query: 421 SQNGQSTIVKKSKTVPLSKTPPVKYPLTSPKSSNTSGKALALKSPEVDSKPSTSVTDKSN 600 NG+S+ +K + P ++TPPVK PL+SPK+SN+S KA + SP +SK S S T + Sbjct: 61 PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120 Query: 601 SVKHQIKD----EKLSTEATGEPNEDSQDSEDDKPLSARLPAGLSKVNSNHAKKSPNTST 768 H E + + N +S+ S+D+KPL AR SK SNHA K S Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGGDSC 180 Query: 769 LSQKRRIPIPEDSDDEIPLSSKFQVKSNAGESINRSSNSGERKPLLSKYDQNGSASTE-- 942 ++ I EDS+DE PLS +F KS+ GES ++S +S E+KPL +K QNGSAS + Sbjct: 181 SIRRPVIEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLATKVQQNGSASRDGP 240 Query: 943 -RKPSTNLKKRPGDGVKTTDESYLKKPKLSEAATPHKNKEASIKAEMREEDDE------- 1098 K ++ L KR VK+ ++S LKK KLS T NK+A++K E + EDD+ Sbjct: 241 MNKSASLLNKRAPGEVKSLNQSSLKKAKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQ 300 Query: 1099 -----------------DHVPISHRMXXXXXXXXXXXXXXN-ITKPIXXXXXXXXXXXXX 1224 D+ PIS R+ + + Sbjct: 301 RGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKK 360 Query: 1225 XXXXXXXXXXXXXXXXXGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEV 1404 GEGQKWTTLVHNGV+F PPYKPHGVKMLYK +P+ LTPEQEEV Sbjct: 361 VIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFLPPYKPHGVKMLYKXQPLTLTPEQEEV 420 Query: 1405 ATMYAVMLETDYMNKPKFKENFMADWRKILGKNHTIQSLEHCDFTPIYEWHXXXXXXXXX 1584 ATM+AVML+TDYM KP+FKENF +DW+K+LGKNHT+Q+LE CDF PIYEWH Sbjct: 421 ATMFAVMLDTDYMTKPRFKENFFSDWKKMLGKNHTVQNLEDCDFGPIYEWHQQEKEKRKQ 480 Query: 1585 XXXXXXXXXXXXXXXXXXXYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR 1764 YMWAIV+GVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR Sbjct: 481 MTTEEKKALKEERLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR 540 Query: 1765 PSDITINIGKDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSTLK 1944 P DITINIGKDAPIPECPIPGE WKE+R+DNTVTWLA+WNDPIN KE KYVFLAASSTLK Sbjct: 541 PRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAFWNDPINQKECKYVFLAASSTLK 600 Query: 1945 GQSDKEKYEKARLLKDYILGIRAAYTKDFTS-KDPAKRQIAVATYLIDKLALRAGNEKDD 2121 GQSDKEKYEKARLLKDYI GIRAAYTKDFT+ KDP K+QIAVATYLIDKLALRAGNEKDD Sbjct: 601 GQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDD 660 Query: 2122 DEADTVGCCTLKVENVEPVPPNTLKFDFLGKDSIRYQNEVEVETAVFKAIQQFRSGKKGG 2301 DEADTVGCCTLKVENVEPVPPN LK DF+GKDSIRYQNEV+VE AVFKAIQQFRSGK+G Sbjct: 661 DEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGC 720 Query: 2302 DDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETRGGDVAEKVVVYQHA 2481 DLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLS+ET+GG VAEKV VYQHA Sbjct: 721 ADLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQHA 780 Query: 2482 NKEVAIICNHQRTVSKSHSAQMLRLNEKIEELKGVVEELQTDLARAKKGKPPLKSADGKP 2661 NKEVAIICNHQRTVSKSHSAQM RLNEKI+ELK +EEL+TDL+RAKKGKPP K ADG+P Sbjct: 781 NKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPAKGADGEP 840 Query: 2662 KRNLNPDALERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEV 2841 KRNLNP++LERKIAQT AKIEKMERDK+TKEDLK VAL TSKI+YLDPRITVAWCKRHEV Sbjct: 841 KRNLNPESLERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRHEV 900 Query: 2842 PIEKIFNKSLLAKFAWAMDVDPGFRF 2919 PIEKIFNKSLLAKFAW+MDVDP FRF Sbjct: 901 PIEKIFNKSLLAKFAWSMDVDPSFRF 926 >gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao] gi|508720293|gb|EOY12190.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao] Length = 904 Score = 1087 bits (2810), Expect = 0.0 Identities = 577/911 (63%), Positives = 657/911 (72%), Gaps = 18/911 (1%) Frame = +1 Query: 241 MAVEACDKQKLXXXXXXXXXPLVFKRXXXXXXXXXXXX-EAKKSLSQKHDRQLGRPAPDV 417 MAVEA K P+VFKR E KK+ SQ+ D Q GR DV Sbjct: 1 MAVEAPAKHVYDFDDDDDDGPVVFKRNNTSSSKQNQLNSEVKKASSQRSDGQSGRQVSDV 60 Query: 418 RSQNGQSTIVKKSKTVPLSKTPPVKYPLTSPKSSNTSGKALALKSPEVDSKPSTSVTDKS 597 RS NGQS+ K+K++ SK+PPVK P+ SPK+S +S KAL +KSP V+ K STS+ D+S Sbjct: 61 RSPNGQSSNAPKNKSISSSKSPPVKSPILSPKASTSSTKALPVKSPVVNFKASTSLNDQS 120 Query: 598 NSVKHQ-----IKDEKLSTEATGEPNEDSQDSEDDKPLSARLPAGLSKVNSNHAKKSPNT 762 Q +K+ + + T EPN D D +D PLSARL K SN K +T Sbjct: 121 KQALKQNMTTAVKEGRSPIKGTTEPNSDDDDDDDSLPLSARL-----KGISNQGNKGAST 175 Query: 763 STLSQKRRIPIP--------EDSDDEIPLSSKFQVKSNAGESINRSSNSGERKPLLSKYD 918 S +Q RR+ +P ED DDE PLS++F VKSN G S +R + E+KPL SK Sbjct: 176 SAPAQSRRL-VPKTEVKVSAEDPDDEAPLSARFNVKSNTGTSSSRLHDCDEKKPLASKIQ 234 Query: 919 QNGSA--STERKPSTNLKKRPGDGVKTTDESYLKKPKLSEAATPHKNKEASIKAEMREED 1092 QNGS ++ ST KRP D ++D S KKPK S+A T K K+ ++KAE +ED Sbjct: 235 QNGSIMKGKQQNSSTLSGKRPLDKGNSSDHSSAKKPKTSDAPTTMKTKQVTVKAEKADED 294 Query: 1093 DEDHVPISHRMXXXXXXXXXXXXXXN-ITKPIXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1269 D DH+PI+ RM TK + Sbjct: 295 D-DHMPIAQRMKKSTASNSKLSSMKQKTTKVVSSSFKKINKKSKKEMKSSKYIKSTKVPP 353 Query: 1270 XXGEGQK-WTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVMLETDYMN 1446 G+GQK W+TLVHNGVIFP PY PHGVKMLY G+PVDLTPEQEEVATM+AVM +TDYM+ Sbjct: 354 SSGDGQKKWSTLVHNGVIFPSPYTPHGVKMLYDGRPVDLTPEQEEVATMFAVMKDTDYMS 413 Query: 1447 KPKFKENFMADWRKILGKNHTIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXX 1626 K +FK+NF DW K+LGKNHTI+ L+ CDFTPIYEWH Sbjct: 414 KTQFKKNFWEDWSKLLGKNHTIKDLDRCDFTPIYEWHLQEKEKKKQMSSEEKKALKEEKL 473 Query: 1627 XXXXXYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPI 1806 +MWAIV+GVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRPSDITINIGKDAPI Sbjct: 474 KQEEKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAPI 533 Query: 1807 PECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSTLKGQSDKEKYEKARLL 1986 PECPIPGE WK+I+HDNTVTWLA+WNDPINPKEFKYVFLAASS+LKGQSDKEKYEKAR+L Sbjct: 534 PECPIPGERWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARML 593 Query: 1987 KDYILGIRAAYTKDFTSKDPAKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVEN 2166 KDYI IRAAYTKDFT+KD KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV N Sbjct: 594 KDYIKNIRAAYTKDFTTKDVMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGN 653 Query: 2167 VEPVPPNTLKFDFLGKDSIRYQNEVEVETAVFKAIQQFRSGKKGGDDLFDRLDTSKLNAH 2346 VE +PPN LKFDFLGKDSI+Y N VEVE V+KAI QF++GK DDLFD+LDTSKLNAH Sbjct: 654 VECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKSKSDDLFDKLDTSKLNAH 713 Query: 2347 LKELMPGLTAKVFRTYNASITLDDMLSRETRGGDVAEKVVVYQHANKEVAIICNHQRTVS 2526 LKELMPGLTAKVFRTYNASITLD+ML++ET+ GDVAEKVVVYQ ANKEVAIICNHQR++S Sbjct: 714 LKELMPGLTAKVFRTYNASITLDEMLNKETKDGDVAEKVVVYQRANKEVAIICNHQRSIS 773 Query: 2527 KSHSAQMLRLNEKIEELKGVVEELQTDLARAKKGKPPLKSADGKPKRNLNPDALERKIAQ 2706 KSHSAQM RL EKI ELKGV++EL+ DL RAKKGKPPLK ADGK KRNL P A+++KI Q Sbjct: 774 KSHSAQMSRLTEKITELKGVLKELKIDLDRAKKGKPPLKDADGKQKRNLTPQAIQKKIDQ 833 Query: 2707 TTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFA 2886 T AKIEKMERD +TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFA Sbjct: 834 TNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFA 893 Query: 2887 WAMDVDPGFRF 2919 WAMDVDP FRF Sbjct: 894 WAMDVDPDFRF 904 >dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea] Length = 920 Score = 1082 bits (2799), Expect = 0.0 Identities = 575/920 (62%), Positives = 652/920 (70%), Gaps = 34/920 (3%) Frame = +1 Query: 241 MAVEACDKQKLXXXXXXXXXPLVFKRXXXXXXXXXXXXEAKKSLSQKHDRQLGRPAPDVR 420 MAVEAC L P++FKR E KK QKH Q DVR Sbjct: 1 MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60 Query: 421 SQNGQSTIVKKSKTVPLSKTPPVKYPLTSPKSSNTSGKALALKSPEVDSKPSTSVTDKSN 600 NG+S+ +K + P ++TPPVK PL+SPK+SN+S KA + SP +SK S S T + Sbjct: 61 PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120 Query: 601 SVKHQIKD----EKLSTEATGEPNEDSQDSEDDKPLSARLPAGLSKVNSNHAKKSPNTST 768 H E + + N +S+ S+D+KPL AR SK SNHA K S Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGGDSC 180 Query: 769 LSQKRRIPIPEDSDDEIPLSSKFQVKSNAGESINRSSNSGERKPLLSKYDQNGSASTE-- 942 ++ I EDS+DE PLS +F KS+ GES ++S +S E+KPL +K NGSAS + Sbjct: 181 SIRRPVIEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDGP 240 Query: 943 --RKPSTNLKKRPGDGVKTTDESYLKKPKLSEAATPHKNKEASIKAEMREEDDE------ 1098 + S + K+ PG+ VK+ ++S LKKPKLS T NK+A++K E + EDD+ Sbjct: 241 MNKSASLSNKRAPGE-VKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLS 299 Query: 1099 ------------------DHVPISHRMXXXXXXXXXXXXXXN-ITKPIXXXXXXXXXXXX 1221 D+ PIS R+ + + Sbjct: 300 QRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSK 359 Query: 1222 XXXXXXXXXXXXXXXXXXGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEE 1401 GEGQKWTTLVHNGVIFPPPYKPHGVKMLYK +P+ LTPEQEE Sbjct: 360 KVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEE 419 Query: 1402 VATMYAVMLETDYMNKPKFKENFMADWRKILGKNHTIQSLEHCDFTPIYEWHXXXXXXXX 1581 VATM+AVML+TDYMNKP+FKENF +DW+K+LGKNHTIQ+LE CDF PIYEWH Sbjct: 420 VATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKK 479 Query: 1582 XXXXXXXXXXXXXXXXXXXXYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 1761 YMW IV+GVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRI Sbjct: 480 QMTTEEKKALKEERLQQEEKYMWVIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRI 539 Query: 1762 RPSDITINIGKDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSTL 1941 RP DITINIGKDAPIPECPIPGE WKE+R+DNTVTWLAYWNDPIN KE KYVFL ASSTL Sbjct: 540 RPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPINQKERKYVFLGASSTL 599 Query: 1942 KGQSDKEKYEKARLLKDYILGIRAAYTKDFTS-KDPAKRQIAVATYLIDKLALRAGNEKD 2118 KGQSDKEKYEKARLLKDYI GIRAAYTKDFT+ KDP K+QIAVATYLIDKLALRAGNEKD Sbjct: 600 KGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKD 659 Query: 2119 DDEADTVGCCTLKVENVEPVPPNTLKFDFLGKDSIRYQNEVEVETAVFKAIQQFRSGKKG 2298 DDEADTVGCCTLKVENVEPVPPN LK DF+GKDSIRYQNEV+VE AVFKAIQQFRSGK+G Sbjct: 660 DDEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEG 719 Query: 2299 GDDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETRGGDVAEKVVVYQH 2478 DLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLS+ET+GG VAEKV VYQH Sbjct: 720 SADLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQH 779 Query: 2479 ANKEVAIICNHQRTVSKSHSAQMLRLNEKIEELKGVVEELQTDLARAKKGKPPLKSADGK 2658 ANKEVAIICNHQRTVSKSHSAQM RLNEKI+ELK +EEL+TDL+RAKKGKPP K ADG+ Sbjct: 780 ANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPSKGADGE 839 Query: 2659 PKRNLNPDALERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHE 2838 PKRNLNP+ALERKIAQT AKIEKME DK+TKEDLK VAL TSKI+YL PRITVAWCKRHE Sbjct: 840 PKRNLNPEALERKIAQTNAKIEKMEGDKKTKEDLKAVALSTSKISYLGPRITVAWCKRHE 899 Query: 2839 VPIEKIFNKSLLAKFAWAMD 2898 VPIEK+FNKSLLAKFAWAM+ Sbjct: 900 VPIEKMFNKSLLAKFAWAMN 919 >dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35] Length = 920 Score = 1082 bits (2798), Expect = 0.0 Identities = 573/920 (62%), Positives = 654/920 (71%), Gaps = 34/920 (3%) Frame = +1 Query: 241 MAVEACDKQKLXXXXXXXXXPLVFKRXXXXXXXXXXXXEAKKSLSQKHDRQLGRPAPDVR 420 MAVEAC L P++FKR E KK QKH Q DVR Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60 Query: 421 SQNGQSTIVKKSKTVPLSKTPPVKYPLTSPKSSNTSGKALALKSPEVDSKPSTSVTDKSN 600 NG+S+ +K + P ++TPPVK PL+SPK+SN+S KA + SP +SK S S T + Sbjct: 61 PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120 Query: 601 SVKHQIKD----EKLSTEATGEPNEDSQDSEDDKPLSARLPAGLSKVNSNHAKKSPNTST 768 H E + + N +S+ S+D+KPL AR SK SNHA K S Sbjct: 121 QQNHHKSSAAFIEPKPSVPPAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGGDSC 180 Query: 769 LSQKRRIPIPEDSDDEIPLSSKFQVKSNAGESINRSSNSGERKPLLSKYDQNGSASTE-- 942 ++ + EDS+DE PLS +F KS+ GES ++S +S E+KPL +K QNGSAS + Sbjct: 181 SIRRPVVEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGP 240 Query: 943 --RKPSTNLKKRPGDGVKTTDESYLKKPKLSEAATPHKNKEASIKAEMREEDDE------ 1098 + S + K+ PG+ VK+ ++S LKKPKLS T NK+A++K E + EDD+ Sbjct: 241 MNKSASLSNKRAPGE-VKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLS 299 Query: 1099 ------------------DHVPISHRMXXXXXXXXXXXXXXN-ITKPIXXXXXXXXXXXX 1221 D+ PIS R+ + + Sbjct: 300 QRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSK 359 Query: 1222 XXXXXXXXXXXXXXXXXXGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEE 1401 GEGQKWTTLVHNGVIFPPPYKPHGVKMLYK +P+ LTPEQEE Sbjct: 360 KVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPLTLTPEQEE 419 Query: 1402 VATMYAVMLETDYMNKPKFKENFMADWRKILGKNHTIQSLEHCDFTPIYEWHXXXXXXXX 1581 VATM+AVML+TDYMNKP+FKENF +DW+K+LGKNHTIQ+LE CDF PIYEWH Sbjct: 420 VATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEREKKK 479 Query: 1582 XXXXXXXXXXXXXXXXXXXXYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 1761 YMWAIV+GVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRI Sbjct: 480 QMTTEEKKALKDERLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRI 539 Query: 1762 RPSDITINIGKDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSTL 1941 P DITINIGKDAPIPECPIPGE WKE+R+DNTVTWLAYWNDP+N KE KYVFLA SSTL Sbjct: 540 HPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVNLKECKYVFLAPSSTL 599 Query: 1942 KGQSDKEKYEKARLLKDYILGIRAAYTKDFTS-KDPAKRQIAVATYLIDKLALRAGNEKD 2118 KGQSDKEKYEKARLLKDYI GIRAAYTKDFT+ KDP K+QIAVATYLIDKLALRAGNEKD Sbjct: 600 KGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKD 659 Query: 2119 DDEADTVGCCTLKVENVEPVPPNTLKFDFLGKDSIRYQNEVEVETAVFKAIQQFRSGKKG 2298 DDEADTVGCCTL+VENVEPVPPN LK DF+GKDSIRYQNEV+VE AVFKAIQQFRSGK+G Sbjct: 660 DDEADTVGCCTLRVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEG 719 Query: 2299 GDDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETRGGDVAEKVVVYQH 2478 +DLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLS+ET+GG VAEKV VYQH Sbjct: 720 SEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQH 779 Query: 2479 ANKEVAIICNHQRTVSKSHSAQMLRLNEKIEELKGVVEELQTDLARAKKGKPPLKSADGK 2658 ANKEVAIICNHQRTVSKSHSAQM RLNEKI+ELK +EEL+TDL+RAKKGKPP K DG+ Sbjct: 780 ANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPSKGDDGE 839 Query: 2659 PKRNLNPDALERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHE 2838 PKRNLNP+ALERKIAQT AKIEKMERDK+TKEDLK VAL TSKI+YLDPRITVAWCKR E Sbjct: 840 PKRNLNPEALERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRQE 899 Query: 2839 VPIEKIFNKSLLAKFAWAMD 2898 VPIEK+FNKSLLAKFAWAM+ Sbjct: 900 VPIEKMFNKSLLAKFAWAMN 919 >ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Solanum tuberosum] Length = 905 Score = 1074 bits (2777), Expect = 0.0 Identities = 571/918 (62%), Positives = 644/918 (70%), Gaps = 25/918 (2%) Frame = +1 Query: 241 MAVEACDKQKLXXXXXXXXX-PLVFKRXXXXXXXXXXXXEAKKSLSQKHDRQLGRPAPDV 417 MAVEA K L PLVFKR S SQK D + GR PDV Sbjct: 1 MAVEAFAKTNLMEDIDDDDDMPLVFKRSSTTSKQ-----NQSNSSSQKQDGRSGRQVPDV 55 Query: 418 RSQNGQSTIVKKSKTVPLSKTPPVKYPLTSPKSSNTSGKAL------------------- 540 RS NGQS+ K KT SK P PLTSPK++ S + Sbjct: 56 RSPNGQSSSTHKVKTAASSKASPAVSPLTSPKAAPLSSRTSPAPNFRTSPAPNSRTPPAP 115 Query: 541 -ALKSPEVDSKPSTSVTDKSNSVKHQI----KDEKLSTEATGEPNEDSQDSEDDKPLSAR 705 + SP +S+PS+S +++ +V Q K+ K + E EPN++++DSEDDKPLSAR Sbjct: 116 NSRTSPAPNSRPSSSAGNQAKNVNQQSNIAPKESKQAIEPKSEPNDEAEDSEDDKPLSAR 175 Query: 706 LPAGLSKVNSNHAKKSPNTSTLSQKRRIPIPEDSDDEIPLSSKFQVKSNAGESINRSSNS 885 +P+GLSK NS HA TST QK R P EDSDDEIPL+S+FQ+KS+AG S ++ S+S Sbjct: 176 VPSGLSKSNSIHANNVLGTSTSVQKSRPPKKEDSDDEIPLASRFQMKSSAGASTSKFSSS 235 Query: 886 GERKPLLSKYDQNGSASTERKPSTNLKKRPGDGVKTTDESYLKKPKLSEAATPHKNKEAS 1065 E KP K QNG S +T L KRP V LK S Sbjct: 236 EEVKP---KIRQNGLPS-----ATVLSKRPPGEVSLLLRLQLKSLDFLMHLHLFLVSNXS 287 Query: 1066 IKAEMREEDDEDHVPISHRMXXXXXXXXXXXXXXNITKPIXXXXXXXXXXXXXXXXXXXX 1245 +K E + EDD+D VP+S R+ + K Sbjct: 288 VKTEKKTEDDDDEVPLSQRIKKAVASASASASKVSSVKKATKVVSSSMKKTKKKLKKPKY 347 Query: 1246 XXXXXXXXXXGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVM 1425 G+GQKWTTL HNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVM Sbjct: 348 SKSSKLQPSSGDGQKWTTLEHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVM 407 Query: 1426 LETDYMNKPKFKENFMADWRKILGKNHTIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXX 1605 L+T+Y+ K +FKENFM DWRKILGKNH IQ LE C+FTPIYEWH Sbjct: 408 LDTEYLTKQQFKENFMNDWRKILGKNHVIQKLEECNFTPIYEWHQSEKEKKKQMSSEEKK 467 Query: 1606 XXXXXXXXXXXXYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITIN 1785 YMWAIV+GVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP+DITIN Sbjct: 468 ALREEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPNDITIN 527 Query: 1786 IGKDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSTLKGQSDKEK 1965 IGK P+PECPIPG+ WKE+RHDNTVTWLA+WNDPINP+EFKYVFLAASS+LKGQSDKEK Sbjct: 528 IGKGVPVPECPIPGQRWKEVRHDNTVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEK 587 Query: 1966 YEKARLLKDYILGIRAAYTKDFTSKDPAKRQIAVATYLIDKLALRAGNEKDDDEADTVGC 2145 YEKAR LKDYI GIR+AYTKDFTSKDP KRQIAVATYLIDKLALRAGNEKDDDEADTVGC Sbjct: 588 YEKARRLKDYIEGIRSAYTKDFTSKDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGC 647 Query: 2146 CTLKVENVEPVPPNTLKFDFLGKDSIRYQNEVEVETAVFKAIQQFRSGKKGGDDLFDRLD 2325 CTLKVENVEPVPPN LKFDFLGKDSIRYQNEV V VFKAIQQFRSGKKGGDDLFD+LD Sbjct: 648 CTLKVENVEPVPPNILKFDFLGKDSIRYQNEVAVYEPVFKAIQQFRSGKKGGDDLFDKLD 707 Query: 2326 TSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETRGGDVAEKVVVYQHANKEVAIIC 2505 TSKLNAHLKELMPGLTAKVFRTYNAS TL+ L++ T+GG++A+KV VY ANKEVAIIC Sbjct: 708 TSKLNAHLKELMPGLTAKVFRTYNASFTLEQQLTKLTQGGELADKVAVYNVANKEVAIIC 767 Query: 2506 NHQRTVSKSHSAQMLRLNEKIEELKGVVEELQTDLARAKKGKPPLKSADGKPKRNLNPDA 2685 NHQRTVSKSHS Q+ RLNEKI+ELK ++EE + DLARAKKGKPP+K ADGK KRNL P+A Sbjct: 768 NHQRTVSKSHSVQISRLNEKIDELKAILEEFKVDLARAKKGKPPVKGADGKAKRNLTPEA 827 Query: 2686 LERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK 2865 L++KI QT KI+ +ER ETKE+LKTVALGTSKINYLDPRITVAWCKRHEVPIEK+FNK Sbjct: 828 LQKKIDQTNVKIDNIERQIETKEELKTVALGTSKINYLDPRITVAWCKRHEVPIEKMFNK 887 Query: 2866 SLLAKFAWAMDVDPGFRF 2919 SLLAKFAWAMDV+P F F Sbjct: 888 SLLAKFAWAMDVEPSFTF 905 >dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana] Length = 920 Score = 1070 bits (2767), Expect = 0.0 Identities = 569/920 (61%), Positives = 651/920 (70%), Gaps = 34/920 (3%) Frame = +1 Query: 241 MAVEACDKQKLXXXXXXXXXPLVFKRXXXXXXXXXXXXEAKKSLSQKHDRQLGRPAPDVR 420 MAVEAC L P++FKR E KK QKH Q DVR Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60 Query: 421 SQNGQSTIVKKSKTVPLSKTPPVKYPLTSPKSSNTSGKALALKSPEVDSKPSTSVTDKSN 600 NG+S+ +K + P ++TPPVK PL+SPK+SN+S KA + SP +SK S S T + Sbjct: 61 PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120 Query: 601 SVKHQIKD----EKLSTEATGEPNEDSQDSEDDKPLSARLPAGLSKVNSNHAKKSPNTST 768 H E + + N +S+ S+D+KPL AR SK SNHA K S Sbjct: 121 QQNHHKSSAAFIEPKPSVPPAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGGDSC 180 Query: 769 LSQKRRIPIPEDSDDEIPLSSKFQVKSNAGESINRSSNSGERKPLLSKYDQNGSASTE-- 942 ++ + EDS+DE PLS +F KS+ GES ++S +S E+KPL +K QNGSAS + Sbjct: 181 SIRRPVVEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGP 240 Query: 943 --RKPSTNLKKRPGDGVKTTDESYLKKPKLSEAATPHKNKEASIKAEMREEDDE------ 1098 + S + K+ PG+ VK+ ++S LKKPKLS T NK+A++K E + EDD+ Sbjct: 241 MNKSASLSNKRAPGE-VKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLS 299 Query: 1099 ------------------DHVPISHRMXXXXXXXXXXXXXXN-ITKPIXXXXXXXXXXXX 1221 D+ PIS R+ + + Sbjct: 300 QRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSK 359 Query: 1222 XXXXXXXXXXXXXXXXXXGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEE 1401 GEGQKWTTLVHNGV+F PPYKPHGVKMLYK +P+ LTPEQEE Sbjct: 360 KVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFLPPYKPHGVKMLYKQQPLTLTPEQEE 419 Query: 1402 VATMYAVMLETDYMNKPKFKENFMADWRKILGKNHTIQSLEHCDFTPIYEWHXXXXXXXX 1581 VATM+AVML+TDYM KP+FKENF +DW+K+LGKNHT+Q+LE CDF PIYEWH Sbjct: 420 VATMFAVMLDTDYMTKPRFKENFFSDWKKMLGKNHTVQNLEDCDFGPIYEWHQQEKEKRK 479 Query: 1582 XXXXXXXXXXXXXXXXXXXXYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 1761 YM AIV+GVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRI Sbjct: 480 QMTTEEKKALKEERLQQEEKYMRAIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRI 539 Query: 1762 RPSDITINIGKDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSTL 1941 P DITINIGKDAPIPECPIPGE WKE+R+DNTVTWLAYWNDP+N KE KYVFLA SSTL Sbjct: 540 HPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVNLKECKYVFLAPSSTL 599 Query: 1942 KGQSDKEKYEKARLLKDYILGIRAAYTKDFTS-KDPAKRQIAVATYLIDKLALRAGNEKD 2118 KGQSDKEKYEKARLLKDYI GIRAAYTKDFT+ KDP K+QIAVATYLIDKLALRAGNEKD Sbjct: 600 KGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKD 659 Query: 2119 DDEADTVGCCTLKVENVEPVPPNTLKFDFLGKDSIRYQNEVEVETAVFKAIQQFRSGKKG 2298 DDEADTVGCCTLKVENVEPVPPN LK DF+GKDSIRYQNEV+VE AVFKAIQQFRSGK+G Sbjct: 660 DDEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEG 719 Query: 2299 GDDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETRGGDVAEKVVVYQH 2478 +DLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLS+ET+GG VAEKV VYQH Sbjct: 720 SEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQH 779 Query: 2479 ANKEVAIICNHQRTVSKSHSAQMLRLNEKIEELKGVVEELQTDLARAKKGKPPLKSADGK 2658 ANKEVAIICNHQRTVSKSHSAQM RLNEKI+ELK +EEL+TDL+RAKKGKPP K DG+ Sbjct: 780 ANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPSKGDDGE 839 Query: 2659 PKRNLNPDALERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHE 2838 PKRNLNP+ALERKIAQT AKIEKMERDK+TKEDLK VAL TSKI+YLDPRITVAWCKR E Sbjct: 840 PKRNLNPEALERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRQE 899 Query: 2839 VPIEKIFNKSLLAKFAWAMD 2898 VPIEK+FNKSLLAKFAWAM+ Sbjct: 900 VPIEKMFNKSLLAKFAWAMN 919 >gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|gb|AAK69776.1| topoisomerase I [Nicotiana tabacum] Length = 852 Score = 1038 bits (2684), Expect = 0.0 Identities = 559/874 (63%), Positives = 624/874 (71%), Gaps = 6/874 (0%) Frame = +1 Query: 241 MAVEACDKQKLXXXXXXXXX--PLVFKRXXXXXXXXXXXXEAKKSLSQKHDRQLGRPAPD 414 MAVEA K KL PLVFKR S SQK D + GR A D Sbjct: 1 MAVEAFSKTKLMAEVDDDDDDMPLVFKRSSTTSKQ-----NQSNSSSQKQDGRSGRQASD 55 Query: 415 VRSQNGQSTIVKKSKTVPLSKTPPVKYPLTSPKSSNTSGKALALKSPEVDSKPSTSVTDK 594 VRS NGQS+ +K K SK P TSPK+S +SG+ SP +S+PS S ++ Sbjct: 56 VRSPNGQSSSAEKVKAGTSSKASRAVSPFTSPKASPSSGRT----SPAPNSRPSASAGNQ 111 Query: 595 SNSVKHQIK----DEKLSTEATGEPNEDSQDSEDDKPLSARLPAGLSKVNSNHAKKSPNT 762 + V Q K + K + E EPN++++DSEDDKPLSARL +GLSK NS+HA K T Sbjct: 112 AKDVNQQSKIVPNEPKQAVEPKSEPNDEAEDSEDDKPLSARLSSGLSKSNSSHANKVLGT 171 Query: 763 STLSQKRRIPIPEDSDDEIPLSSKFQVKSNAGESINRSSNSGERKPLLSKYDQNGSASTE 942 S QK R P EDSDDEIPL+S+FQ+KSNAG S ++SSNS E KP K QNG ST Sbjct: 172 SASVQKSRPPKKEDSDDEIPLASRFQLKSNAGASTSKSSNSEEVKP---KIRQNGLPST- 227 Query: 943 RKPSTNLKKRPGDGVKTTDESYLKKPKLSEAATPHKNKEASIKAEMREEDDEDHVPISHR 1122 T L KRP V LK + EAS+K E + EDD+D VPIS R Sbjct: 228 ----TVLSKRPPGDVSLLLRLQLKSLGFLMHLHLFRVSEASVKPEKKTEDDDDDVPISQR 283 Query: 1123 MXXXXXXXXXXXXXXNITKPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGQKWTTL 1302 + TK + GEGQKWTTL Sbjct: 284 IKKSVASASKLSSAKKATKVVSSSMKTKKKLKKSKYSKSSKLQPSS-----GEGQKWTTL 338 Query: 1303 VHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVMLETDYMNKPKFKENFMADW 1482 VHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVML+TDYM+K +FKENFM DW Sbjct: 339 VHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVMLDTDYMSKLQFKENFMNDW 398 Query: 1483 RKILGKNHTIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAIVN 1662 RKILGKNH IQ+L+ CDFTPIYE YMWAIV+ Sbjct: 399 RKILGKNHVIQNLDDCDFTPIYERPSSEKEKKKQMSTKRKRPLREEKLKQEEKYMWAIVD 458 Query: 1663 GVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGESWKE 1842 GVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP+DITINIGK APIPECPIPGE WKE Sbjct: 459 GVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPNDITINIGKGAPIPECPIPGERWKE 518 Query: 1843 IRHDNTVTWLAYWNDPINPKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYILGIRAAYT 2022 +RHDNTVTWLA+WNDPINP+EFKYVFLAASS+LKGQSDKEKYEKAR LKDYI GIR+AYT Sbjct: 519 VRHDNTVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSAYT 578 Query: 2023 KDFTSKDPAKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNTLKFD 2202 KDFTSKDP KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN LKFD Sbjct: 579 KDFTSKDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFD 638 Query: 2203 FLGKDSIRYQNEVEVETAVFKAIQQFRSGKKGGDDLFDRLDTSKLNAHLKELMPGLTAKV 2382 FLGKDSIRYQNEV V VFKAIQ FRSGKKGGDDLFD+LDTSKLNAHLKELMPGLTAKV Sbjct: 639 FLGKDSIRYQNEVAVYKPVFKAIQLFRSGKKGGDDLFDKLDTSKLNAHLKELMPGLTAKV 698 Query: 2383 FRTYNASITLDDMLSRETRGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQMLRLNE 2562 FRTYNAS+TL+ L++ T+GG++AEKV VY ANKEVAIICNHQR+VSKSHS Q+ +LNE Sbjct: 699 FRTYNASVTLEQQLTKLTQGGELAEKVAVYNLANKEVAIICNHQRSVSKSHSVQISKLNE 758 Query: 2563 KIEELKGVVEELQTDLARAKKGKPPLKSADGKPKRNLNPDALERKIAQTTAKIEKMERDK 2742 KI+ELK ++EE + DLARAKKGKPPLK ADGK KRNL P+AL++KI QT KIE +E+ Sbjct: 759 KIDELKALLEEFKVDLARAKKGKPPLKGADGKAKRNLAPEALQKKIDQTNVKIENIEKQI 818 Query: 2743 ETKEDLKTVALGTSKINYLDPRITVAWCKRHEVP 2844 ETKE+LKTVALGTSKINYLDPRITVAWC+RH P Sbjct: 819 ETKEELKTVALGTSKINYLDPRITVAWCERHRFP 852 >ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis sativus] gi|449503189|ref|XP_004161878.1| PREDICTED: DNA topoisomerase 1-like [Cucumis sativus] Length = 889 Score = 1025 bits (2649), Expect = 0.0 Identities = 551/901 (61%), Positives = 642/901 (71%), Gaps = 8/901 (0%) Frame = +1 Query: 241 MAVEACDKQKLXXXXXXXXXPLVFKRXXXXXXXXXXXXEAKKSLSQKHDRQLGRPAPDVR 420 MAVE K + P+VFKR E K S +Q+ + GR D+ Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRTSASRQNQLDS-EIKHSQAQRLSKLPGRQGSDLC 59 Query: 421 SQNGQSTIVKKSKTVPLSKTPPVKYPLTSPKSSNTSGKALAL-KSPEVDSKPSTSVTDKS 597 S NGQS+ +K T L KT P++ + S K+S +S L KS K S S+ + Sbjct: 60 STNGQSSNNQKRMT-SLPKTSPMRSEIGSQKASRSSPIPEPLTKSLGTSLKASHSMDSRP 118 Query: 598 NS-VKHQIKDEKLSTEATGEPNEDSQDSEDDKPLSARLPAGLSKVNSNHAKKSPNTSTLS 774 S V +K+E +S P++++ DSEDDKPLS RL K N N K ST+ Sbjct: 119 KSLVNAVVKEENVSIN----PSQENSDSEDDKPLSIRL-----KGNPNQPNKGL-VSTVP 168 Query: 775 QKRRIPIPEDSDDEIPLSSKFQVKSNAGESINRSSNSGERKPLLSKYDQNGSASTER--K 948 + + DSDDE+PLSSKFQ+K +G ++ E+KPL+ K QNGS S ++ K Sbjct: 169 KNKVKKSLADSDDEVPLSSKFQMKHASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQK 228 Query: 949 PSTNLKKRP--GDGVKTTDESYLKKPKLSEAATPHKNKEASIKAEMREEDDEDHVPISHR 1122 P+ KRP + + + KKPKL+++++P +K S+KA+ +DD+D +PIS R Sbjct: 229 PAVLSSKRPLPNEDSHSPSQFPTKKPKLTDSSSPLNSKLVSLKAKQEVDDDDDDIPISQR 288 Query: 1123 MXXXXXXXXXXXXXX-NITKPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGQK-WT 1296 M I+K + G+GQK WT Sbjct: 289 MKKVSATVNKSSSSKPTISKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWT 348 Query: 1297 TLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVMLETDYMNKPKFKENFMA 1476 TLVHNGVIFPPPY+ HGVKMLYKGKPVDLTP QEEVATM+AVM +TDYM KPKFKENF Sbjct: 349 TLVHNGVIFPPPYQTHGVKMLYKGKPVDLTPPQEEVATMFAVMKDTDYMLKPKFKENFWN 408 Query: 1477 DWRKILGKNHTIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAI 1656 DWRK+LGKNH IQ+L+ CDFTPIY+W+ YMWAI Sbjct: 409 DWRKLLGKNHVIQNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKAVKEEKLKQEEKYMWAI 468 Query: 1657 VNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGESW 1836 ++GVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RI PSDITINIGK APIPECPIPGE W Sbjct: 469 LDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRICPSDITINIGKGAPIPECPIPGERW 528 Query: 1837 KEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYILGIRAA 2016 KE+RHDNTVTWLA+WNDPIN KEFKYVFLAASS+LKGQSDKEKYEKAR+LKDYI IR A Sbjct: 529 KEVRHDNTVTWLAFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNA 588 Query: 2017 YTKDFTSKDPAKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNTLK 2196 YTKDFTSKDP +RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV+ VPPN L+ Sbjct: 589 YTKDFTSKDPTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLE 648 Query: 2197 FDFLGKDSIRYQNEVEVETAVFKAIQQFRSGKKGGDDLFDRLDTSKLNAHLKELMPGLTA 2376 F+FLGKDSIRY+N VEVE VFKAI QF+SGK G DDLFD+LDTSKLNAHLK+LMPGLTA Sbjct: 649 FNFLGKDSIRYENTVEVELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTA 708 Query: 2377 KVFRTYNASITLDDMLSRETRGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQMLRL 2556 KVFRTYNASITLDDML+R T+ G+V+EK+V YQHANKEVAIICNHQRTVSKSH AQM RL Sbjct: 709 KVFRTYNASITLDDMLNRGTKNGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRL 768 Query: 2557 NEKIEELKGVVEELQTDLARAKKGKPPLKSADGKPKRNLNPDALERKIAQTTAKIEKMER 2736 NEKI EL+ +++EL+ DL RAKKGKPPLK +DGK KRNL P+ALE+KI+QT AKIEK+ER Sbjct: 769 NEKISELRDILKELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIER 828 Query: 2737 DKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPGFR 2916 D +TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDP FR Sbjct: 829 DMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFR 888 Query: 2917 F 2919 F Sbjct: 889 F 889 >ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Citrus sinensis] gi|568842074|ref|XP_006474978.1| PREDICTED: DNA topoisomerase 1-like isoform X2 [Citrus sinensis] gi|568842076|ref|XP_006474979.1| PREDICTED: DNA topoisomerase 1-like isoform X3 [Citrus sinensis] gi|568842078|ref|XP_006474980.1| PREDICTED: DNA topoisomerase 1-like isoform X4 [Citrus sinensis] Length = 902 Score = 1016 bits (2626), Expect = 0.0 Identities = 559/921 (60%), Positives = 642/921 (69%), Gaps = 28/921 (3%) Frame = +1 Query: 241 MAVEACDK-QKLXXXXXXXXXPLVFKRXXXXXXXXXXXXEAKKSLSQKHDRQLGRPAPDV 417 MAVEA K ++ P VFKR E K+ P Sbjct: 1 MAVEASSKPSRVYDFDDDEDGPAVFKRNTAASRQNLANPEVKR--------------PSS 46 Query: 418 RSQNGQSTIVKKSKT-VPLSKTPPVKYPLTSPKSSNTSGKALA----------------L 546 + NGQ++ K KT V SK PVK P S K++ +S KA + Sbjct: 47 STANGQNSNAPKDKTTVSSSKVLPVKSPPPSQKATTSSAKASPSKSPMRSPVKSPVRSPV 106 Query: 547 KSPEVDSKPSTSVTDK-SNSVKHQ----IKDEKLSTEATGEPNEDSQDSEDDKPLSARLP 711 KSP +SK S+ + D+ S +H +K E++ + G ++D+ DSEDDKPLSARL Sbjct: 107 KSPVANSKESSPLDDRLKQSPQHNALAVVKKEEIK-DGNGLKSDDN-DSEDDKPLSARLK 164 Query: 712 AGLSKVNSNHAKKSPNTSTLSQKRRIPIPEDSDDEIPLSSKFQVKSNAGESINRSSNSGE 891 VN + + +S+ PEDSDDE+PLSS+F KSNAG S + +S E Sbjct: 165 GNSKNVNQGIGASKADAA-ISEVNVKTDPEDSDDEVPLSSRFP-KSNAGTSGAKPIDSDE 222 Query: 892 RKPLLSKYDQNGSAS--TERKPSTNLKKRPGDGVKTTDESYLKKPKLSEAATPHKNKEAS 1065 +KPL SK QNGS S T++K S+ KRP ++ S KKPK+S+ + K K+ + Sbjct: 223 KKPLASKVQQNGSTSRETQQKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQVT 282 Query: 1066 IKAEMREEDDEDHVPISHRMXXXXXXXXXXXXXX-NITKPIXXXXXXXXXXXXXXXXXXX 1242 +K E ++ DD+DH+PIS RM TK + Sbjct: 283 VKVE-KKADDDDHIPISQRMKNSAPSVKKSVTNTAKATKSVSSSSNKINKKTKKVIKNSQ 341 Query: 1243 XXXXXXXXXXXGEGQK-WTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYA 1419 G+GQK WTTLVHNGVIFPPPY PHGVKMLYKGK V+LTPEQEEVATM+A Sbjct: 342 YSKSTKMLPGSGDGQKKWTTLVHNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFA 401 Query: 1420 VMLETDYMNKPKFKENFMADWRKILGKNHTIQSLEHCDFTPIYEWHXXXXXXXXXXXXXX 1599 VML+TDYM KPKF+ENF DWRK+LGKNH IQ+LE CDF PIY+WH Sbjct: 402 VMLDTDYMQKPKFRENFWNDWRKLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEE 461 Query: 1600 XXXXXXXXXXXXXXYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDIT 1779 YMWAIV+GVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI+PSDIT Sbjct: 462 KKALKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDIT 521 Query: 1780 INIGKDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSTLKGQSDK 1959 INIGKD PIPECPIPGESWKE++HDNTVTWLA+WNDPINPKEFKYVFLAASS+LKGQSDK Sbjct: 522 INIGKDVPIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDK 581 Query: 1960 EKYEKARLLKDYILGIRAAYTKDFTSKDPAKRQIAVATYLIDKLALRAGNEKDDDEADTV 2139 EKYEKAR LKDYI IRAAYTKDF S+D +RQIAVATYLIDKLALRAGNEKDDDEADTV Sbjct: 582 EKYEKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTV 641 Query: 2140 GCCTLKVENVEPVPPNTLKFDFLGKDSIRYQNEVEVETAVFKAIQQFRSGKKGGDDLFDR 2319 GCCTLKV NVE +PPN LKFDFLGKDSI+Y N VEVE V+KAI QF++GKK DDLFD+ Sbjct: 642 GCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDK 701 Query: 2320 LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETRGGDVAEKVVVYQHANKEVAI 2499 LDT+KLNAHLKELMPGLTAKVFRTYNASITLD ML++ T GDVA K+ VYQ ANKEVAI Sbjct: 702 LDTAKLNAHLKELMPGLTAKVFRTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAI 761 Query: 2500 ICNHQRTVSKSHSAQMLRLNEKIEELKGVVEELQTDLARAKKGKPPL-KSADGKPKRNLN 2676 ICNHQRTVSK+HSAQM RL EKIE+LKGV+++L+ DL RAKKGKPPL K +DGK KRNL Sbjct: 762 ICNHQRTVSKTHSAQMSRLTEKIEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLA 821 Query: 2677 PDALERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 2856 P+ALERK+AQT AKIEKMERD +TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI Sbjct: 822 PEALERKMAQTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 881 Query: 2857 FNKSLLAKFAWAMDVDPGFRF 2919 FNKSLLAKFAWAMDVDP FRF Sbjct: 882 FNKSLLAKFAWAMDVDPEFRF 902 >ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citrus clementina] gi|567920950|ref|XP_006452481.1| hypothetical protein CICLE_v10007398mg [Citrus clementina] gi|557555705|gb|ESR65719.1| hypothetical protein CICLE_v10007398mg [Citrus clementina] gi|557555707|gb|ESR65721.1| hypothetical protein CICLE_v10007398mg [Citrus clementina] Length = 902 Score = 1015 bits (2625), Expect = 0.0 Identities = 557/921 (60%), Positives = 640/921 (69%), Gaps = 28/921 (3%) Frame = +1 Query: 241 MAVEACDK-QKLXXXXXXXXXPLVFKRXXXXXXXXXXXXEAKKSLSQKHDRQLGRPAPDV 417 MAVEA K ++ P VFKR E K+ P Sbjct: 1 MAVEASSKPSRVYDFDDDEDGPAVFKRNTAASRQNLANPEVKR--------------PSS 46 Query: 418 RSQNGQSTIVKKSKT-VPLSKTPPVKYPLTSPKSSNTSGKALALKSPE------------ 558 + NGQ++ K KT V SK PVK P S K++ +S KA LKSP Sbjct: 47 STANGQNSNAPKDKTTVSSSKVLPVKSPPPSQKATTSSAKASPLKSPMRSPVKSPVRSPV 106 Query: 559 ----VDSKPSTSVTDKSNSVKHQ-----IKDEKLSTEATGEPNEDSQDSEDDKPLSARLP 711 +SK S+ + D+ + +K E++ + G ++D+ DSEDDKPLSARL Sbjct: 107 KSPVANSKESSPLDDRLKQLPQHNALAVVKKEEIK-DGNGLKSDDN-DSEDDKPLSARLK 164 Query: 712 AGLSKVNSNHAKKSPNTSTLSQKRRIPIPEDSDDEIPLSSKFQVKSNAGESINRSSNSGE 891 VN + + +S+ PEDSDDE+PLSS+F KSNAG S + +S E Sbjct: 165 GNTKNVNQGIGASKADAA-ISEVNVKTDPEDSDDEVPLSSRFP-KSNAGTSGAKPIDSDE 222 Query: 892 RKPLLSKYDQNGSAS--TERKPSTNLKKRPGDGVKTTDESYLKKPKLSEAATPHKNKEAS 1065 +KPL SK QNGS S T++K S+ KRP ++ S KKPK+S+ + K K+ + Sbjct: 223 KKPLASKVQQNGSTSRETQQKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQVT 282 Query: 1066 IKAEMREEDDEDHVPISHRMXXXXXXXXXXXXXX-NITKPIXXXXXXXXXXXXXXXXXXX 1242 +K E ++ DD+DH+PIS RM TK + Sbjct: 283 VKVE-KKADDDDHIPISQRMKNSAPSVKKSVTNTAKATKSVSSSSKKINKKTKKVIKNSQ 341 Query: 1243 XXXXXXXXXXXGEGQK-WTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYA 1419 G+GQK WTTLVHNGVIFPPPY PHGVKMLYKGK V+LTPEQEEVATM+A Sbjct: 342 YSKSTKMLPGSGDGQKKWTTLVHNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFA 401 Query: 1420 VMLETDYMNKPKFKENFMADWRKILGKNHTIQSLEHCDFTPIYEWHXXXXXXXXXXXXXX 1599 VML+TDYM KPKF+ENF DWRK+LGKNH IQ+LE CDF PIY+WH Sbjct: 402 VMLDTDYMQKPKFRENFWNDWRKLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEE 461 Query: 1600 XXXXXXXXXXXXXXYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDIT 1779 YMWAIV+GVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI+PSDIT Sbjct: 462 KKALKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDIT 521 Query: 1780 INIGKDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSTLKGQSDK 1959 INIGKD PIPECPIPGESWKE++HDNTVTWLA+WNDPINPKEFKYVFLAASS+LKGQSD+ Sbjct: 522 INIGKDVPIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDR 581 Query: 1960 EKYEKARLLKDYILGIRAAYTKDFTSKDPAKRQIAVATYLIDKLALRAGNEKDDDEADTV 2139 EKYEKAR LKDYI IRAAYTKDF S+D +RQIAVATYLIDKLALRAGNEKDDDEADTV Sbjct: 582 EKYEKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTV 641 Query: 2140 GCCTLKVENVEPVPPNTLKFDFLGKDSIRYQNEVEVETAVFKAIQQFRSGKKGGDDLFDR 2319 GCCTLKV NVE +PPN LKFDFLGKDSI+Y N VEVE V+KAI QF++GKK DDLFD+ Sbjct: 642 GCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDK 701 Query: 2320 LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETRGGDVAEKVVVYQHANKEVAI 2499 LDT+KLNAHLKELMPGLTAKVFRTYNASITLD ML++ T GDVA K+ VYQ ANKEVAI Sbjct: 702 LDTAKLNAHLKELMPGLTAKVFRTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAI 761 Query: 2500 ICNHQRTVSKSHSAQMLRLNEKIEELKGVVEELQTDLARAKKGKPPL-KSADGKPKRNLN 2676 ICNHQRTVSK+HSAQM RL EKIE+LKGV+++L+ DL RAKKGKPPL K +DGK KRNL Sbjct: 762 ICNHQRTVSKTHSAQMSRLTEKIEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLA 821 Query: 2677 PDALERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 2856 P+ALERK+AQT AKIEKMERD +TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI Sbjct: 822 PEALERKMAQTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 881 Query: 2857 FNKSLLAKFAWAMDVDPGFRF 2919 FNKSLLAKFAWAMDVDP FRF Sbjct: 882 FNKSLLAKFAWAMDVDPEFRF 902 >ref|XP_002300344.1| DNA topoisomerase family protein [Populus trichocarpa] gi|222847602|gb|EEE85149.1| DNA topoisomerase family protein [Populus trichocarpa] Length = 877 Score = 1006 bits (2602), Expect = 0.0 Identities = 531/883 (60%), Positives = 613/883 (69%), Gaps = 10/883 (1%) Frame = +1 Query: 301 PLVFKRXXXXXXXXXXXXEAKKSLSQKHDRQLGRPAPDVRSQNGQSTIVKKSKT-VPLSK 477 P+VFKR S + + + +P+ ++ NGQS ++K K+ +P S Sbjct: 24 PIVFKRGGN-----------STSKQNQLNPEAKKPSSSSQNSNGQSLNLQKGKSPIPSSN 72 Query: 478 TPPVKYPLTSPKSSNTSGKALALKSPEVDSKPSTSVTDKSNSVKHQIKDEKLSTEATGEP 657 P+K SPK+S +S KA LKSP ++ TS D+ Q+ + E + Sbjct: 73 ASPMKSSTGSPKASASSAKASPLKSPLTYTRALTSSNDQLKQASKQVVSNAVKEET--KS 130 Query: 658 NEDSQDSEDDKPLSARLPAGLSKVNSN-----HAKKSPNTSTLSQKRRIPIPEDSDDEIP 822 D +DSEDDKPLS+R+ + VN H K P+ DDE+P Sbjct: 131 IVDDEDSEDDKPLSSRIKGSTNNVNKGVTAPAHVKDEPS---------------DDDEVP 175 Query: 823 LSSKFQVKSNAGESINRSSNSGERKPLLSKYDQNGSASTERKPSTNL--KKRPGDGVKTT 996 LSS+F +KSNAG S ++S S E +P SK NGS +++ +++ KRP D + Sbjct: 176 LSSRFAMKSNAGTSSSKSIRSSEIRPFPSKSQLNGSTKNDKQQKSSVVPTKRPMDNKVPS 235 Query: 997 DESYLKKPKLSEAATPHKNKEASIKAEMREEDDEDHVPISHRMXXXXXXXXXXXXXXN-I 1173 + S KKPKL +A T K K+ ++K E + +DD DH+ IS RM + Sbjct: 236 NHSSAKKPKLLDACTTTKVKQVTVKVEQKADDD-DHLTISQRMKKADSSANKSSFAKKKV 294 Query: 1174 TKPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGQK-WTTLVHNGVIFPPPYKPHGV 1350 TK + +GQK WTTLVHNGVIFPPPYKPHGV Sbjct: 295 TKVVSSSLKKTTQKNKKQMKNSKYSKSTKVQPGSSDGQKKWTTLVHNGVIFPPPYKPHGV 354 Query: 1351 KMLYKGKPVDLTPEQEEVATMYAVMLETDYMNKPKFKENFMADWRKILGKNHTIQSLEHC 1530 K+LYKGKP+DLTPEQEEVATM+AVM +TDY+ KP+F++NF DWRK+LGKNH IQ L+ C Sbjct: 355 KILYKGKPIDLTPEQEEVATMFAVMKDTDYVQKPQFRQNFWNDWRKLLGKNHVIQKLDDC 414 Query: 1531 DFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAIVNGVKEKVGNFRVEPPGL 1710 DF PIYEWH YMWAIVNGVKEKVGNFRVEPPGL Sbjct: 415 DFNPIYEWHQQEKEKKKQMSTEEKKVLKEEKLKQEEKYMWAIVNGVKEKVGNFRVEPPGL 474 Query: 1711 FRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGESWKEIRHDNTVTWLAYWNDP 1890 FRGRGEHPKMGKLK RIRPSDITINIGKDAPIPECPIPGE WKE++HDNTVTWLA+WNDP Sbjct: 475 FRGRGEHPKMGKLKSRIRPSDITINIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDP 534 Query: 1891 INPKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYILGIRAAYTKDFTSKDPAKRQIAVA 2070 INPKEFKYVFLAASS+LKGQSDKEKYEKAR LKDYI IRAAYTKDF SKD KRQIAVA Sbjct: 535 INPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHNIRAAYTKDFASKDITKRQIAVA 594 Query: 2071 TYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNTLKFDFLGKDSIRYQNEVEVE 2250 TYLIDKLALRAGNEKDDDEADTVGCCTLKV NVE +PPN LKFDFLGKDSIRY+N VEVE Sbjct: 595 TYLIDKLALRAGNEKDDDEADTVGCCTLKVANVECIPPNKLKFDFLGKDSIRYENTVEVE 654 Query: 2251 TAVFKAIQQFRSGKKGGDDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSR 2430 V+KAI F+ KK DDLFD LDTSKLNAHLKELMPGLTAKVFRTYNASITLD+ L Sbjct: 655 LPVYKAIGHFQVAKKQTDDLFDSLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEKLYE 714 Query: 2431 ETRGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQMLRLNEKIEELKGVVEELQTDL 2610 ET GDVAEK+V+Y ANK+VAIICNHQRT+SKSH AQM RL EKIEELK ++EL+TDL Sbjct: 715 ETEDGDVAEKIVIYNQANKQVAIICNHQRTISKSHDAQMSRLTEKIEELKSTLKELKTDL 774 Query: 2611 ARAKKGKPPLKSADGKPKRNLNPDALERKIAQTTAKIEKMERDKETKEDLKTVALGTSKI 2790 RAKKGKPPLK ADGK KR+L P+A+E+KIA T KIEKME +TKEDLKTVALGTSKI Sbjct: 775 DRAKKGKPPLKGADGKQKRSLTPEAIEKKIATTNQKIEKMEMAMKTKEDLKTVALGTSKI 834 Query: 2791 NYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPGFRF 2919 NYLDPRITVAWCKRHEVPI+KIFNKSLLAKF WAMDVDP FRF Sbjct: 835 NYLDPRITVAWCKRHEVPIDKIFNKSLLAKFTWAMDVDPQFRF 877