BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00003685
         (683 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   162   9e-38
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           147   4e-33
gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidop...   145   9e-33
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   145   1e-32
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   145   1e-32
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   144   3e-32
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]        138   2e-30
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...   137   2e-30
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc...   137   2e-30
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   137   3e-30
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]           134   2e-29
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]         134   2e-29
emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]   133   4e-29
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     133   4e-29
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   132   8e-29
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   132   8e-29
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     132   1e-28
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   132   1e-28
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   131   2e-28
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   129   6e-28

>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  162 bits (410), Expect = 9e-38
 Identities = 92/226 (40%), Positives = 128/226 (56%)
 Frame = +3

Query: 3    AAYLINRSPSVPLKGKCPEFVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGY 182
            A +LINRSPS  L+ K P+  ++GK  D+ +LKVFGC A+VH K DKLEPR+ KC+FLGY
Sbjct: 586  AVHLINRSPSSALQFKTPQEKWTGKAADYQHLKVFGCTAYVHTKTDKLEPRAVKCIFLGY 645

Query: 183  PEGVKGYRLWLRGEPGFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLPGLSHL 362
            P+GVKGY+LW+  +   K I SRDV FNE D         + +  PA + VE L  L   
Sbjct: 646  PKGVKGYKLWIETQGKGKCIISRDVTFNEQD---------MSKQTPAKD-VEGLDQLQFE 695

Query: 363  GESENLHDETVNETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRRNT 542
             E E L  E   ET      +E  +          E +N P    L  Y L RDR +R  
Sbjct: 696  VEHETLQPEKSKETSSKTAQEEIVH----------ERQNEP-TQGLESYNLVRDRQKRQV 744

Query: 543  RQPLKFDDFHMTSYAFSMFESIDNFEPKSYEDALKSANSVEWLNAM 680
            + P ++    MT++A S+ E I + EPK+Y++A+ S  + +W+ A+
Sbjct: 745  KPPKRYGQAEMTAFALSVAEEIVDMEPKTYQEAINSNEADQWVKAI 790


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  147 bits (370), Expect = 4e-33
 Identities = 91/231 (39%), Positives = 135/231 (58%), Gaps = 4/231 (1%)
 Frame = +3

Query: 3    AAYLINRSPSVPLKGKCPEFVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGY 182
            A YLINRSPS+PL  K P  V+SG   D+S LKVFGC A+ H    KLEPR+ KC+FLGY
Sbjct: 622  ACYLINRSPSIPLNKKTPIEVWSGTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGY 681

Query: 183  PEGVKGYRLWLRGEPGFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLPGL--S 356
              GVKGY+LW   E G K   SR V+FNES    +  T SLP SE  P K  Q   +   
Sbjct: 682  GSGVKGYKLW-NPETG-KTFMSRSVVFNES----VMFTNSLP-SEHVPEKELQRMHMQVE 734

Query: 357  HLGESENLHDETVNETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRR 536
            H+ +   +  E V+E D    +  + + HD+ V+  P +  + E     D  +A+ +++R
Sbjct: 735  HVDDDTGVQVEPVDEQDDHNNDVADDDAHDD-VQQTPPILQLEE-----DLSIAQRKSKR 788

Query: 537  NTRQPLK-FDDFHMTSYAFSMFESIDN-FEPKSYEDALKSANSVEWLNAMN 683
             T+ P +  ++ +++ YA S  E ++N  EP +Y++A++  +S  W++AM+
Sbjct: 789  TTKPPKRLIEECNLSYYALSCAEQVENVHEPATYKEAVRCGDSENWISAMH 839


>gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1166

 Score =  145 bits (367), Expect = 9e-33
 Identities = 93/245 (37%), Positives = 138/245 (56%), Gaps = 19/245 (7%)
 Frame = +3

Query: 3    AAYLINRSPSVPLKGKCPEFVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGY 182
            A YLINR+P+  +  K PE V++G + D S+L+ FGC+A+VH   DK  PR+ K VF+GY
Sbjct: 517  AVYLINRTPNSFIGFKLPEEVWTGTKPDLSHLRRFGCSAYVHVTQDKTSPRAVKGVFMGY 576

Query: 183  PEGVKGYRLWLRGEPGFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLP----- 347
            P G+KGYR+WL  E   K  TSR+V+FNE++    +++ +    E A  + ++L      
Sbjct: 577  PCGIKGYRVWLPKEG--KCTTSRNVVFNETELYKDTLSSADERKEEAEKEYKKLKKARKR 634

Query: 348  -GLSH------------LGESENLHDETVNETDLPARNQENANVHDEYVENLPEVENMPE 488
               SH            L +S +   ET + +   + N E + +++E V +    EN   
Sbjct: 635  VSFSHDLLRGPSTSCCDLDDSSSQGGETSSSSSESSENLEESEMNEEVVGS----EN--- 687

Query: 489  NDNLSDYQLARDRTRR-NTRQPLKFDDFHMTSYAFSMFESIDNFEPKSYEDALKSANSVE 665
              +L DY LARD  RR N R P +F+D    +YA +  E ++  EPKSYE+ALKS+   +
Sbjct: 688  EQSLDDYLLARDMKRRSNIRPPSRFEDEDFVAYALATAEDLEEEEPKSYEEALKSSKRKQ 747

Query: 666  WLNAM 680
            W NAM
Sbjct: 748  WENAM 752


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  145 bits (365), Expect = 1e-32
 Identities = 90/231 (38%), Positives = 135/231 (58%), Gaps = 4/231 (1%)
 Frame = +3

Query: 3    AAYLINRSPSVPLKGKCPEFVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGY 182
            A YLINRSPS+PL  K P  V+SG   D+S LKVFGC A+ H    KLEPR+ KC+FLGY
Sbjct: 620  ACYLINRSPSIPLNKKTPIEVWSGMPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGY 679

Query: 183  PEGVKGYRLWLRGEPGFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLPGL--S 356
              GVKGY+LW   E G K   SR V+FNES    +  T SLP SE  P K  Q   +   
Sbjct: 680  GSGVKGYKLW-NPETG-KTFMSRSVVFNES----VMFTNSLP-SEHVPEKELQRMHMQVE 732

Query: 357  HLGESENLHDETVNETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRR 536
            H+ +   +  E V+E D    +  + + HD+ V+  P +  + E     +  +A+ +++R
Sbjct: 733  HVDDDTGVQVEPVHEQDDHNNDVADDDAHDD-VQQTPPILQLEE-----ELPIAQRKSKR 786

Query: 537  NTRQPLK-FDDFHMTSYAFSMFESIDN-FEPKSYEDALKSANSVEWLNAMN 683
             T+ P +  ++ +++ YA S  E ++N  EP +Y++A++  +S  W++AM+
Sbjct: 787  TTKPPKRLIEECNLSYYALSCAEQVENVHEPATYKEAVRCGDSENWISAMH 837


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549942|gb|ABA92739.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1373

 Score =  145 bits (365), Expect = 1e-32
 Identities = 90/231 (38%), Positives = 135/231 (58%), Gaps = 4/231 (1%)
 Frame = +3

Query: 3    AAYLINRSPSVPLKGKCPEFVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGY 182
            A YLINRSPS+PL  K P  V+SG   D+S LKVFGC A+ H    KLEPR+ KC+FLGY
Sbjct: 620  ACYLINRSPSIPLNKKTPIEVWSGTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGY 679

Query: 183  PEGVKGYRLWLRGEPGFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLPGL--S 356
              GVKGY+LW   E G K   SR V+FNES    +  T SLP SE  P K  Q   +   
Sbjct: 680  GSGVKGYKLW-NPETG-KTFMSRSVVFNES----VMFTNSLP-SEHVPEKELQRMHMQVE 732

Query: 357  HLGESENLHDETVNETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRR 536
            H+ +   +  E V+E D    +  + + HD+ V+  P +  + E     +  +A+ +++R
Sbjct: 733  HVDDDTGVQVEPVHEQDDHNNDVADDDAHDD-VQQTPPILQLEE-----ELPIAQRKSKR 786

Query: 537  NTRQPLK-FDDFHMTSYAFSMFESIDN-FEPKSYEDALKSANSVEWLNAMN 683
             T+ P +  ++ +++ YA S  E ++N  EP +Y++A++  +S  W++AM+
Sbjct: 787  TTKPPKRLIEECNLSYYALSCAEQVENVHEPATYKEAVRCGDSENWISAMH 837


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  144 bits (363), Expect = 3e-32
 Identities = 90/231 (38%), Positives = 135/231 (58%), Gaps = 4/231 (1%)
 Frame = +3

Query: 3    AAYLINRSPSVPLKGKCPEFVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGY 182
            A YLINRSPS+PL  K P  V+SG   D+S LKVFGC A+ H    KLEPR+ KC+FLGY
Sbjct: 620  ACYLINRSPSIPLNKKTPIEVWSGTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGY 679

Query: 183  PEGVKGYRLWLRGEPGFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLPGL--S 356
              GVKGY+LW   E G K   SR V+FNES    +  T SLP SE  P K  Q   +   
Sbjct: 680  GSGVKGYKLW-NPETG-KTFMSRSVVFNES----VMFTNSLP-SEHVPEKELQRMHMQVE 732

Query: 357  HLGESENLHDETVNETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRR 536
            H+ +   +  E V+E D    +  + + HD+ V+  P +  + E     +  +A+ +++R
Sbjct: 733  HVDDYTGVQVEPVHEQDDHNNDVADDDAHDD-VQQTPPILQLEE-----ELPIAQRKSKR 786

Query: 537  NTRQPLK-FDDFHMTSYAFSMFESIDN-FEPKSYEDALKSANSVEWLNAMN 683
             T+ P +  ++ +++ YA S  E ++N  EP +Y++A++  +S  W++AM+
Sbjct: 787  TTKPPKRLIEECNLSYYALSCAEQVENVHEPATYKEAVRCGDSENWISAMH 837


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score =  138 bits (347), Expect = 2e-30
 Identities = 84/230 (36%), Positives = 127/230 (55%), Gaps = 4/230 (1%)
 Frame = +3

Query: 3    AAYLINRSPSVPLKGKCPEFVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGY 182
            A+YL+NRSPS  +  K PE +++GK  ++ NL+VFGC A++H    KLE R+ K VF+GY
Sbjct: 618  ASYLVNRSPSSAIGFKTPEELWNGKPANYQNLRVFGCPAYLHINQGKLEARALKGVFVGY 677

Query: 183  PEGVKGYRLWLRGEPGFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLPGLSHL 362
            P+GVKGY++W + +   K I SRDV+F+ES        V L ES      ++  P  +  
Sbjct: 678  PDGVKGYKIWCKDQG--KCIVSRDVVFHES--------VLLKESAEHDAGLQDNPAANKR 727

Query: 363  GESENLHDETVNETDLPARNQENANVHDEYVENLP----EVENMPENDNLSDYQLARDRT 530
              SE      VN   L  ++ E     D+          EV  +P+ D L +YQLARDR 
Sbjct: 728  SGSET---SKVNVELLTDKSSEKEAASDDERATAESEEHEVSELPQAD-LQNYQLARDRV 783

Query: 531  RRNTRQPLKFDDFHMTSYAFSMFESIDNFEPKSYEDALKSANSVEWLNAM 680
            RR  R P+++    + +YA    + +   EP ++ +A++S +  +WL AM
Sbjct: 784  RREVRAPVRYGYADLIAYALLCADEVTIEEPANFSEAMESVHCDKWLEAM 833


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
            gi|20087076|gb|AAM10749.1|AC112514_2 Putative
            retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score =  137 bits (346), Expect = 2e-30
 Identities = 86/233 (36%), Positives = 130/233 (55%), Gaps = 6/233 (2%)
 Frame = +3

Query: 3    AAYLINRSPSVPLKGKCPEFVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGY 182
            A YLINRSPS  +  K P  V+SG   ++S+L+VFGC A+ H    KLEPR+ KC+FLGY
Sbjct: 589  ACYLINRSPSYAIDKKTPIKVWSGSPANYSDLRVFGCIAYAHVDNSKLEPRAIKCIFLGY 648

Query: 183  PEGVKGYRLWLRGEPGFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLPG 350
            P GVKGY+LW       K + SR+V+F+ES    D P  S  V +   E A  +VE L  
Sbjct: 649  PSGVKGYKLWCPETK--KVVISRNVVFHESVMLHDKP--STNVPVESQEKASVQVEHLIS 704

Query: 351  LSHLGESENLHDETVNETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRT 530
              H  E EN+    +N  D P     ++++          V+  P+      + +A+D+ 
Sbjct: 705  SGHAPEKENV---AIN-LDAPVIEDSDSSI----------VQQSPK------HSIAKDKP 744

Query: 531  RRNTRQPLKF-DDFHMTSYAFSMFESID-NFEPKSYEDALKSANSVEWLNAMN 683
            +RN + P ++ ++ ++ +YA S+ E I+ N EP +Y DA+ S +   W+ AM+
Sbjct: 745  KRNIKPPRRYIEEANIVAYALSVAEEIEGNVEPSTYSDAIVSDDCNRWITAMH 797


>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1262

 Score =  137 bits (346), Expect = 2e-30
 Identities = 86/233 (36%), Positives = 130/233 (55%), Gaps = 6/233 (2%)
 Frame = +3

Query: 3    AAYLINRSPSVPLKGKCPEFVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGY 182
            A YLINRSPS  +  K P  V+SG   ++S+L+VFGC A+ H    KLEPR+ KC+FLGY
Sbjct: 626  ACYLINRSPSYAIDKKTPIKVWSGSPANYSDLRVFGCIAYAHVDNSKLEPRAIKCIFLGY 685

Query: 183  PEGVKGYRLWLRGEPGFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLPG 350
            P GVKGY+LW       K + SR+V+F+ES    D P  S  V +   E A  +VE L  
Sbjct: 686  PSGVKGYKLWCPETK--KVVISRNVVFHESVMLHDKP--STNVPVESQEKASVQVEHLIS 741

Query: 351  LSHLGESENLHDETVNETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRT 530
              H  E EN+    +N  D P     ++++          V+  P+      + +A+D+ 
Sbjct: 742  SGHAPEKENV---AIN-LDAPVIEDSDSSI----------VQQSPK------HSIAKDKP 781

Query: 531  RRNTRQPLKF-DDFHMTSYAFSMFESID-NFEPKSYEDALKSANSVEWLNAMN 683
            +RN + P ++ ++ ++ +YA S+ E I+ N EP +Y DA+ S +   W+ AM+
Sbjct: 782  KRNIKPPRRYIEEANIVAYALSVAEEIEGNVEPSTYSDAIVSDDCNRWITAMH 834


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  137 bits (345), Expect = 3e-30
 Identities = 87/233 (37%), Positives = 129/233 (55%), Gaps = 6/233 (2%)
 Frame = +3

Query: 3    AAYLINRSPSVPLKGKCPEFVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGY 182
            A YLINRSPS  +  K P  V+SG   ++S+L+VFGC A+ H    KLEPR+ KC+FLGY
Sbjct: 835  ACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGY 894

Query: 183  PEGVKGYRLWLRGEPGFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLPG 350
            P GVKGY+LW       K + SR+V+F+ES    D P  S  V +   E A  +VE L  
Sbjct: 895  PSGVKGYKLWCPETK--KVVISRNVVFHESVMLHDKP--STNVPVESQEKASVQVEHLIS 950

Query: 351  LSHLGESENLHDETVNETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRT 530
              H  E E   D  +N+ D P     N+++          V+  P+        +A+DR 
Sbjct: 951  SGHAPEKE---DVAINQ-DEPVIEDSNSSI----------VQQSPKR------SIAKDRP 990

Query: 531  RRNTRQPLKF-DDFHMTSYAFSMFESID-NFEPKSYEDALKSANSVEWLNAMN 683
            +RN + P ++ ++ ++ +YA S+ E I+ N EP +Y +A+ S +   W+ AM+
Sbjct: 991  KRNIKPPQRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMH 1043


>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
          Length = 1009

 Score =  134 bits (338), Expect = 2e-29
 Identities = 86/233 (36%), Positives = 127/233 (54%), Gaps = 6/233 (2%)
 Frame = +3

Query: 3    AAYLINRSPSVPLKGKCPEFVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGY 182
            A YLINRSPS  +  K P  V+S     +S+L+VF C A+ H    KLEPR+ KC+FLGY
Sbjct: 449  ACYLINRSPSYAIDKKTPIEVWSSSPAKYSDLRVFSCTAYAHVDNGKLEPRAIKCIFLGY 508

Query: 183  PEGVKGYRLWLRGEPGFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLPG 350
            P GVKGY+LW       K + +R+V+F+ES    D P  S  V +   E A  +VE L  
Sbjct: 509  PSGVKGYKLWCPETK--KVVINRNVVFHESVMLHDKP--STNVPVESQEKASVQVEHLIS 564

Query: 351  LSHLGESENLHDETVNETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRT 530
              H  E E   D  +N+ D P     ++++          V+  P+        +A+DR 
Sbjct: 565  SGHAPEKE---DVAINQ-DAPVIEDSDSSI----------VQQSPKR------SIAKDRP 604

Query: 531  RRNTRQPLKF-DDFHMTSYAFSMFESID-NFEPKSYEDALKSANSVEWLNAMN 683
            +RNT+ P K+ ++ ++ +YA S+ E I+ N EP +Y DA+ S +   W+ AM+
Sbjct: 605  KRNTKPPRKYIEEANIVTYALSVAEEIEGNTEPSTYSDAIVSDDCNRWITAMH 657


>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
          Length = 1007

 Score =  134 bits (338), Expect = 2e-29
 Identities = 84/233 (36%), Positives = 131/233 (56%), Gaps = 6/233 (2%)
 Frame = +3

Query: 3    AAYLINRSPSVPLKGKCPEFVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGY 182
            A YLINRSPS  +  K P  V+S   +++S+L+VFGC A+ H    KLEPR+ KC+FLGY
Sbjct: 410  ACYLINRSPSYAIDKKTPIEVWSDSPVNYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGY 469

Query: 183  PEGVKGYRLWLRGEPGFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLPG 350
            P G+KGY+LW       K + SR+V+F+ES    D P  S  V +   E A  +VE L  
Sbjct: 470  PSGMKGYKLWCPKTK--KVVISRNVVFHESVMLHDKP--STNVPVESQEKASVQVEHLIS 525

Query: 351  LSHLGESENLHDETVNETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRT 530
              H  E EN+    +N+ D+P     +++           V+  P+        +A+D+ 
Sbjct: 526  SGHAPEKENV---AINQ-DVPVIEDSDSST----------VQQSPKR------FIAKDKP 565

Query: 531  RRNTRQPLKF-DDFHMTSYAFSMFESID-NFEPKSYEDALKSANSVEWLNAMN 683
            +RNT+ P ++ ++ ++ +YA S+ E I+ N EP +Y +A+ S +   W+ AM+
Sbjct: 566  KRNTKPPQRYIEEANIVAYALSVAEDIEGNAEPSTYSEAIVSDDCNRWITAMH 618


>emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]
          Length = 947

 Score =  133 bits (335), Expect = 4e-29
 Identities = 80/215 (37%), Positives = 115/215 (53%), Gaps = 1/215 (0%)
 Frame = +3

Query: 9    YLINRSPSVPLKGKCPEFVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPE 188
            +LI+RSPS  L+ K P+  ++GK +D+ +LKVFGC A+VH K DKLEPR+ KC+FLGYP+
Sbjct: 622  HLISRSPSSALQFKTPQEKWTGKVVDYQHLKVFGCTAYVHTKTDKLEPRAVKCIFLGYPK 681

Query: 189  GVKGYRLWLRGEPGFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLPGLSHLGE 368
            GVKGY+LW++ +   K I S+D   +E ++       S PE     +             
Sbjct: 682  GVKGYKLWIKTQGKEKCIISKD---SEMEY-----ETSQPEKSTETS------------- 720

Query: 369  SENLHDETVNE-TDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRRNTR 545
            SE + +E V E  D P R                          L  Y LARDR +R  +
Sbjct: 721  SETVQEEIVQERQDEPTR-------------------------GLESYSLARDRQKRQVK 755

Query: 546  QPLKFDDFHMTSYAFSMFESIDNFEPKSYEDALKS 650
             P K+    MT++A S+ E I + EPK+Y++A+ S
Sbjct: 756  PPKKYGQAEMTTFALSVAEEIVDMEPKTYQEAINS 790


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  133 bits (335), Expect = 4e-29
 Identities = 86/233 (36%), Positives = 127/233 (54%), Gaps = 6/233 (2%)
 Frame = +3

Query: 3    AAYLINRSPSVPLKGKCPEFVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGY 182
            A YLINRSPS  +  K P  V+SG   ++S+L+VFGC A+ H    KLEPR  KC+FLGY
Sbjct: 537  ACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRVIKCIFLGY 596

Query: 183  PEGVKGYRLWLRGEPGFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLPG 350
              GVKGY+LW       K + SR+V+F+ES    D P  S  V +   E    +VE L  
Sbjct: 597  LSGVKGYKLWCPETK--KVVISRNVVFHESIMLHDKP--STNVPVESQEKVSVQVEHLIS 652

Query: 351  LSHLGESENLHDETVNETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRT 530
              H  E E   D  +N+ D P     ++++          V+  P+        +A+DR 
Sbjct: 653  SGHAPEKE---DVAINQ-DAPVIEDSDSSI----------VQQSPKR------SIAKDRP 692

Query: 531  RRNTRQPLKF-DDFHMTSYAFSMFESID-NFEPKSYEDALKSANSVEWLNAMN 683
            +RNT+ P ++ ++ ++ +YA S+ E I+ N EP +Y DA+ S +   W+ AM+
Sbjct: 693  KRNTKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMH 745


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  132 bits (333), Expect = 8e-29
 Identities = 81/235 (34%), Positives = 121/235 (51%), Gaps = 8/235 (3%)
 Frame = +3

Query: 3    AAYLINRSPSVPLKGKCPEFVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGY 182
            AAYL+NRSPS  +  K P+ V+SGK  ++S LK+FGC A+ H    KLEPR+ KC+FLGY
Sbjct: 727  AAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGY 786

Query: 183  PEGVKGYRLWLRGEPGFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLPGLSHL 362
              GVKGYRLW   +   K I SRDV F+ES                           +  
Sbjct: 787  ATGVKGYRLWCTEDRTPKFIISRDVTFDES---------------------------AMF 819

Query: 363  GESENLHDET-VNETDLPARNQENANVHDEYVENLPEV-ENMPENDNLSDYQLARDRTRR 536
            G+ +   D    ++TDL A  +    V       + +  E  P  D      +A  R RR
Sbjct: 820  GQRKEFGDLAGTSKTDLGANQKVEFEVDAPMENGVDDTSEEQPVIDQNDSQSIAAHRPRR 879

Query: 537  NTRQPLKFDDF------HMTSYAFSMFESIDNFEPKSYEDALKSANSVEWLNAMN 683
              R+P+++ D       +  ++A ++ E I   EP+SY++A++S +S +WL++M+
Sbjct: 880  EIRRPMRYVDCVSANITNPVAFALAVAEEIGREEPRSYKEAMESKDSKKWLSSMD 934


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  132 bits (333), Expect = 8e-29
 Identities = 81/235 (34%), Positives = 121/235 (51%), Gaps = 8/235 (3%)
 Frame = +3

Query: 3    AAYLINRSPSVPLKGKCPEFVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGY 182
            AAYL+NRSPS  +  K P+ V+SGK  ++S LK+FGC A+ H    KLEPR+ KC+FLGY
Sbjct: 940  AAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGY 999

Query: 183  PEGVKGYRLWLRGEPGFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLPGLSHL 362
              GVKGYRLW   +   K I SRDV F+ES                           +  
Sbjct: 1000 ATGVKGYRLWCTEDRTPKFIISRDVTFDES---------------------------AMF 1032

Query: 363  GESENLHDET-VNETDLPARNQENANVHDEYVENLPEV-ENMPENDNLSDYQLARDRTRR 536
            G+ +   D    ++TDL A  +    V       + +  E  P  D      +A  R RR
Sbjct: 1033 GQRKEFGDLAGTSKTDLGANQKVEFEVDAPMENGVDDTSEEQPVIDQNDSQSIAAXRPRR 1092

Query: 537  NTRQPLKFDDF------HMTSYAFSMFESIDNFEPKSYEDALKSANSVEWLNAMN 683
              R+P+++ D       +  ++A ++ E I   EP+SY++A++S +S +WL++M+
Sbjct: 1093 EIRRPMRYVDCVSANITNPVAFALAVAEEIGREEPRSYKEAMESKDSKKWLSSMD 1147


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  132 bits (331), Expect = 1e-28
 Identities = 83/231 (35%), Positives = 126/231 (54%), Gaps = 6/231 (2%)
 Frame = +3

Query: 9    YLINRSPSVPLKGKCPEFVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPE 188
            YLINRSPS     K P  V+SG   ++S+L+VFGC A+ H    KLEPR+ KC+FLGYP 
Sbjct: 665  YLINRSPSYATDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPS 724

Query: 189  GVKGYRLWLRGEPGFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLPGLS 356
            GVKGY+LW       K + SR+V+F+ES    D P  S  V +   E A  +VE L    
Sbjct: 725  GVKGYKLWCPETK--KVVISRNVVFHESVILHDKP--STNVPVESQEKASVQVEHLISSG 780

Query: 357  HLGESENLHDETVNETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRR 536
            H  E EN+    +N+ D P     ++++  +                 S   +A+D+ +R
Sbjct: 781  HAPEKENV---AINQ-DAPVIEDSDSSIVQQ----------------SSKRSIAKDKPKR 820

Query: 537  NTRQPLKF-DDFHMTSYAFSMFESID-NFEPKSYEDALKSANSVEWLNAMN 683
            N + P ++ ++ ++ +YA S+ E I+ N EP +Y +A+ S +   W+ AM+
Sbjct: 821  NIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMH 871


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  132 bits (331), Expect = 1e-28
 Identities = 83/231 (35%), Positives = 126/231 (54%), Gaps = 6/231 (2%)
 Frame = +3

Query: 9    YLINRSPSVPLKGKCPEFVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPE 188
            YLINRSPS     K P  V+SG   ++S+L+VFGC A+ H    KLEPR+ KC+FLGYP 
Sbjct: 665  YLINRSPSYATDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPS 724

Query: 189  GVKGYRLWLRGEPGFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLPGLS 356
            GVKGY+LW       K + SR+V+F+ES    D P  S  V +   E A  +VE L    
Sbjct: 725  GVKGYKLWCPETK--KVVISRNVVFHESVILHDKP--STNVPVESQEKASVQVEHLISSG 780

Query: 357  HLGESENLHDETVNETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRR 536
            H  E EN+    +N+ D P     ++++  +                 S   +A+D+ +R
Sbjct: 781  HAPEKENV---AINQ-DAPVIEDSDSSIVQQ----------------SSKRSIAKDKPKR 820

Query: 537  NTRQPLKF-DDFHMTSYAFSMFESID-NFEPKSYEDALKSANSVEWLNAMN 683
            N + P ++ ++ ++ +YA S+ E I+ N EP +Y +A+ S +   W+ AM+
Sbjct: 821  NIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMH 871


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  131 bits (330), Expect = 2e-28
 Identities = 87/232 (37%), Positives = 123/232 (53%), Gaps = 6/232 (2%)
 Frame = +3

Query: 3    AAYLINRSPSVPLKGKCPEFVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGY 182
            A YLINR P   ++ K P  ++SGK  D+SNLK FGC A+ H    KLEPR+KK VF+GY
Sbjct: 606  ACYLINRGPHTGIQCKTPMEMWSGKAADYSNLKAFGCTAYYHVSEGKLEPRAKKGVFVGY 665

Query: 183  PEGVKGYRLWLRGEPGFKAITSRDVIFNESDFPCLSVTV---SLPESEPAPNKVE--QLP 347
             +GVKG+R+W   E   + I SR+V+F+ES  P L   V   +  E+     +VE   + 
Sbjct: 666  GDGVKGFRIWSPAEK--RVIMSRNVVFDES--PLLRTIVKPTTTSETGSLDKQVEFQVIQ 721

Query: 348  GLSHLGESENLHDETVNETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDR 527
              S L E E    E   ETD+P                    E+MP + + S   +A+DR
Sbjct: 722  NESDLKEPEEEDQEPQTETDIP--------------------ESMPSDIHQS---IAQDR 758

Query: 528  TRR-NTRQPLKFDDFHMTSYAFSMFESIDNFEPKSYEDALKSANSVEWLNAM 680
             RR   R P ++    M  YA  + E +D  EP +Y++A+ S++S +W  AM
Sbjct: 759  PRRVGVRPPTRYGFEDMVGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAM 810


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
            gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
            Japonica Group]
          Length = 1601

 Score =  129 bits (325), Expect = 6e-28
 Identities = 83/220 (37%), Positives = 122/220 (55%), Gaps = 6/220 (2%)
 Frame = +3

Query: 3    AAYLINRSPSVPLKGKCPEFVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGY 182
            A YLINRSPS  +  K P  V+SG   ++S+L+VFGC A+ H    KLEPR+ KC+FLGY
Sbjct: 628  ACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGY 687

Query: 183  PEGVKGYRLWLRGEPGFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLPG 350
            P GVKGY+LW       K + SR+V+F+ES    D P  S  V +   E A  +VE L  
Sbjct: 688  PSGVKGYKLWCPETK--KVVISRNVVFHESVMLHDKP--STNVPVESQEKASVQVEHLIS 743

Query: 351  LSHLGESENLHDETVNETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRT 530
              H  E E   D  +N+ D P     N+++          V+  P+        +A+DR 
Sbjct: 744  SGHAPEKE---DVAINQ-DEPVIEDSNSSI----------VQQSPKR------SIAKDRP 783

Query: 531  RRNTRQPLKF-DDFHMTSYAFSMFESID-NFEPKSYEDAL 644
            +RN + P ++ ++ ++ +YA S+ E I+ N EP +Y +A+
Sbjct: 784  KRNIKPPQRYIEEANIVAYALSVAEEIEGNAEPSTYSEAI 823