BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00003591
         (749 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron sp...   111   2e-22
ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron sp...   107   4e-21
ref|XP_004489340.1| PREDICTED: chloroplastic group IIA intron sp...   107   6e-21
ref|XP_004489339.1| PREDICTED: chloroplastic group IIA intron sp...   107   6e-21
ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron sp...   103   6e-20
ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron sp...   102   2e-19
ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron sp...   100   7e-19
ref|XP_003618343.1| Chloroplastic group IIA intron splicing faci...   100   7e-19
emb|CBI34982.3| unnamed protein product [Vitis vinifera]              100   9e-19
ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp...   100   9e-19
ref|XP_006482481.1| PREDICTED: chloroplastic group IIA intron sp...    99   2e-18
ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron sp...    99   2e-18
ref|XP_006431007.1| hypothetical protein CICLE_v10013715mg [Citr...    97   7e-18
gb|AAF24608.1|AC010870_1 unknown protein [Arabidopsis thaliana]        96   1e-17
ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana] gi|2...    96   1e-17
gb|EOY02282.1| CRM family member 2, putative isoform 2 [Theobrom...    94   6e-17
gb|EOY02281.1| CRM family member 2, putative isoform 1 [Theobrom...    94   6e-17
ref|XP_003554853.1| PREDICTED: chloroplastic group IIA intron sp...    93   1e-16
ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron sp...    92   2e-16
ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti...    92   2e-16

>ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 1049

 Score =  111 bits (278), Expect = 2e-22
 Identities = 90/264 (34%), Positives = 136/264 (51%), Gaps = 15/264 (5%)
 Frame = +1

Query: 1    SKREAMKRSIEAQRRESLKLHVLKLNRNIDELKLKMAKDKDTSDMQLTKALKHGFVEQEI 180
            SKREAMKRSIEAQRR+SLKLHVLKL +NI+ L+ ++AK+++   +Q            +I
Sbjct: 687  SKREAMKRSIEAQRRQSLKLHVLKLTQNIEALQSRLAKNEEMVHIQ----------SPDI 736

Query: 181  VENRYNEGEISQKDPENDRQSYLGDPADETRE-SHGTDATSKAD-----EDPMHNSKGSV 342
            V+ +     IS      + QS    P +++ + +  TD +S+ +      D  HNS+   
Sbjct: 737  VDRQVPVTGISDAAGGTNYQSSSASPTEDSGDAAEDTDPSSQKELSSDSSDTDHNSQQEF 796

Query: 343  DISQRPVRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTN-EQNVELSHYPRSQ 519
             I       D   Q   K + + +T + + Q  S  KE++   N N +Q    S    S 
Sbjct: 797  PI-------DPFFQYEGKVEAVGDTIQPEHQSISSIKESKSMFNVNVDQKTFGSAVSESV 849

Query: 520  YRAS--------SSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQKANERPLAMPSRALQLS 675
             ++S        S T ++  P       + +   + K + +++    R   MP+R +QLS
Sbjct: 850  SKSSRGEVKIHFSETRSFNKPREVDDKKEVSQLPSVKPQQALRSTRSRSEGMPTRKVQLS 909

Query: 676  NRERLLLRKQALKMKNIPMLAVGK 747
            NRERLLLRKQALKMK  P+LAVG+
Sbjct: 910  NRERLLLRKQALKMKKQPVLAVGR 933


>ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 1049

 Score =  107 bits (267), Expect = 4e-21
 Identities = 86/259 (33%), Positives = 133/259 (51%), Gaps = 10/259 (3%)
 Frame = +1

Query: 1    SKREAMKRSIEAQRRESLKLHVLKLNRNIDELKLKMAKDKDTSDMQLTKALKHGFVEQEI 180
            SKREAMKRSIEAQRR+SLKLHVLKL +NI+ L+ ++AK+++ S +Q            +I
Sbjct: 687  SKREAMKRSIEAQRRQSLKLHVLKLTQNIEALQSRLAKNEEISHIQ----------SPDI 736

Query: 181  VENRYNEGEISQKDPENDRQSYLGDPADETRESHGTDATSKADEDPMHNSKGSVD-ISQR 357
            V+ +     IS      + QS +  P +++ ++   + T  + +  + N     D  SQ+
Sbjct: 737  VDRQVPVMGISDAAGGTNYQSIVASPIEDSGDA--AEDTDPSSQKELSNDFSDTDHDSQQ 794

Query: 358  PVRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTN-EQNVELSHYPRSQYRAS- 531
                +   Q   K + + +T +   Q  S  KE++   N N +Q    S    S  ++S 
Sbjct: 795  EFPINPFFQYEGKVEAMGDTIQPQHQSISSIKESKSMFNVNVDQETFGSAVSESVSKSSR 854

Query: 532  -------SSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQKANERPLAMPSRALQLSNRERL 690
                   S T ++  P       + +     K + +++    R   M +R +QLSNRERL
Sbjct: 855  GEVKIHFSETRSFNKPREVNNKMEVSQPPPVKPQQTLRSTRSRSEGMSTRRVQLSNRERL 914

Query: 691  LLRKQALKMKNIPMLAVGK 747
            LLRKQALKMK  P+LAVG+
Sbjct: 915  LLRKQALKMKKQPVLAVGR 933


>ref|XP_004489340.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Cicer arietinum]
          Length = 834

 Score =  107 bits (266), Expect = 6e-21
 Identities = 87/266 (32%), Positives = 134/266 (50%), Gaps = 17/266 (6%)
 Frame = +1

Query: 1    SKREAMKRSIEAQRRESLKLHVLKLNRNIDELKLKMAKDKDTSDMQLTKAL-------KH 159
            +K++A+KRSIEAQRRE+LKLHVLKL++NI+ELKL+M KD + S  Q+ + L       KH
Sbjct: 479  NKKQALKRSIEAQRREALKLHVLKLDKNINELKLQMVKD-EASSKQIAETLRSDLAIDKH 537

Query: 160  GFVEQEIVENRYNEGEISQKDPENDRQSYLGD-------PADETRESHGTDATSKADEDP 318
            G     I  N   E  +  +    ++   L D         + ++E+   +     +E  
Sbjct: 538  GGSSNSINCNSPKEASVHNQQAIEEQHIELIDGVSSNSLNCNSSKEASVDNQQQAIEEQH 597

Query: 319  MHNSKG-SVDISQRPVRGDVSSQSVVKGKY--LFNTTKADLQPRSLPKETRGFLNTNEQN 489
            +    G S ++   P    V +Q  ++ +Y  L +T  A    +  P+ + G ++   Q 
Sbjct: 598  IELIDGASSNLISSPEEASVGNQRAIQEQYIELIDTGGA---RQGEPESSAGLVHQERQL 654

Query: 490  VELSHYPRSQYRASSSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQKANERPLAMPSRALQ 669
             E S         S   T +   +     +  A  ++   EPS    N+  + +PSR+L 
Sbjct: 655  DEESD--------SVVDTGHCVSNNKAMEASVASLKSDP-EPSAPVINKSSIELPSRSLY 705

Query: 670  LSNRERLLLRKQALKMKNIPMLAVGK 747
            LSNRERLLLR+QAL MK  P+LA+GK
Sbjct: 706  LSNRERLLLRRQALNMKKRPLLAIGK 731


>ref|XP_004489339.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Cicer arietinum]
          Length = 1019

 Score =  107 bits (266), Expect = 6e-21
 Identities = 87/266 (32%), Positives = 134/266 (50%), Gaps = 17/266 (6%)
 Frame = +1

Query: 1    SKREAMKRSIEAQRRESLKLHVLKLNRNIDELKLKMAKDKDTSDMQLTKAL-------KH 159
            +K++A+KRSIEAQRRE+LKLHVLKL++NI+ELKL+M KD + S  Q+ + L       KH
Sbjct: 664  NKKQALKRSIEAQRREALKLHVLKLDKNINELKLQMVKD-EASSKQIAETLRSDLAIDKH 722

Query: 160  GFVEQEIVENRYNEGEISQKDPENDRQSYLGD-------PADETRESHGTDATSKADEDP 318
            G     I  N   E  +  +    ++   L D         + ++E+   +     +E  
Sbjct: 723  GGSSNSINCNSPKEASVHNQQAIEEQHIELIDGVSSNSLNCNSSKEASVDNQQQAIEEQH 782

Query: 319  MHNSKG-SVDISQRPVRGDVSSQSVVKGKY--LFNTTKADLQPRSLPKETRGFLNTNEQN 489
            +    G S ++   P    V +Q  ++ +Y  L +T  A    +  P+ + G ++   Q 
Sbjct: 783  IELIDGASSNLISSPEEASVGNQRAIQEQYIELIDTGGA---RQGEPESSAGLVHQERQL 839

Query: 490  VELSHYPRSQYRASSSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQKANERPLAMPSRALQ 669
             E S         S   T +   +     +  A  ++   EPS    N+  + +PSR+L 
Sbjct: 840  DEESD--------SVVDTGHCVSNNKAMEASVASLKSDP-EPSAPVINKSSIELPSRSLY 890

Query: 670  LSNRERLLLRKQALKMKNIPMLAVGK 747
            LSNRERLLLR+QAL MK  P+LA+GK
Sbjct: 891  LSNRERLLLRRQALNMKKRPLLAIGK 916


>ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 1062

 Score =  103 bits (257), Expect = 6e-20
 Identities = 86/262 (32%), Positives = 132/262 (50%), Gaps = 13/262 (4%)
 Frame = +1

Query: 1    SKREAMKRSIEAQRRESLKLHVLKLNRNIDELKLKMAKDKDTSDMQLTKALKHGFVEQEI 180
            +KREAMKRS+EAQRR+SLKLHVL+L RNI++LKL++ KDK+ + ++         V++EI
Sbjct: 698  TKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEEI 757

Query: 181  VENRYNEGEISQKDPENDRQSYLGDPADETRESHGTDATSKADEDPMHNSKGSVDISQRP 360
             + +  E   S    E + Q+         R   G D TS        N  G   I   P
Sbjct: 758  GDMQPAECMRSDTSHEVNVQA---------RGECGADLTSTES-----NDTGDATIDGPP 803

Query: 361  -VRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTNEQNVELSHYPRSQYRASSS 537
             ++ D  ++S+       N  ++    +S+ KE++  +  +     ++    S    S  
Sbjct: 804  AIQQDKQTESLTHNGISINEIESKSSLKSVSKESQLNMIADFFAEGVASGTSSCPDNSMC 863

Query: 538  TTAYIPPHTGGRGSDGAGYQNAKLEPSVQKANERP-LAMP-----------SRALQLSNR 681
            ++   P  +    +     +N  +E S + A  R  L+ P           SRA+QLSNR
Sbjct: 864  SSDNEPRESSIESAKSRSSENEPIEQSFELAKGRSGLSTPIGTGNVWNENNSRAIQLSNR 923

Query: 682  ERLLLRKQALKMKNIPMLAVGK 747
            +RLLLRKQAL+MK  P+LAVG+
Sbjct: 924  DRLLLRKQALRMKKRPVLAVGR 945


>ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568857850|ref|XP_006482477.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 1076

 Score =  102 bits (253), Expect = 2e-19
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
 Frame = +1

Query: 1    SKREAMKRSIEAQRRESLKLHVLKLNRNIDELKLKMAKDKDTSDMQLTKALKHGFVEQEI 180
            +KREAMKRS+EAQRR+SLKLHVL+L RNI++LKL++ KDK+ + ++         V++EI
Sbjct: 698  TKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEEI 757

Query: 181  VENRYNEGEISQKDPENDRQSYLGDPADETR-ESHGT-----DATSKADEDPMHNSKGSV 342
             + +  E   S    E + Q+     AD T  ES+ T     D      +D    S    
Sbjct: 758  GDMQPAECMRSDTSHEVNVQARGECGADLTSTESNDTGDATIDGPPAIQQDKQTESLTHN 817

Query: 343  DISQRPVRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTNEQNVELSHYPRSQY 522
             IS   +    S +SV K   L     AD     +   T    + + Q V   +      
Sbjct: 818  GISINEIESKSSLKSVSKESQL--NMIADFFAEGVASGTSSCPDNSMQEVMEYNTIVDAE 875

Query: 523  RASSSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQKANERP-LAMP-----------SRAL 666
            + SS      P  +    +     +N  +E S + A  R  L+ P           SRA+
Sbjct: 876  QCSSDNE---PRESSIESAKSRSSENEPIEQSFELAKGRSGLSTPIGTGNVWNENNSRAI 932

Query: 667  QLSNRERLLLRKQALKMKNIPMLAVGK 747
            QLSNR+RLLLRKQAL+MK  P+LAVG+
Sbjct: 933  QLSNRDRLLLRKQALRMKKRPVLAVGR 959


>ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X5 [Citrus sinensis]
          Length = 1045

 Score =  100 bits (248), Expect = 7e-19
 Identities = 95/262 (36%), Positives = 136/262 (51%), Gaps = 13/262 (4%)
 Frame = +1

Query: 1    SKREAMKRSIEAQRRESLKLHVLKLNRNIDELKLKMAKDKDTSDMQLTKALKHGFVEQEI 180
            +KREAMKRS+EAQRR+SLKLHVL+L RNI++LKL++ KDK+ + ++         V++EI
Sbjct: 698  TKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEEI 757

Query: 181  VENRYNEGEISQKDPENDRQSYLGDPADET-RESHGT-DAT---------SKADEDPMHN 327
             + +  E   S    E + Q+     AD T  ES+ T DAT          K  E   HN
Sbjct: 758  GDMQPAECMRSDTSHEVNVQARGECGADLTSTESNDTGDATIDGPPAIQQDKQTESLTHN 817

Query: 328  SKGSVDISQRPVRGDVSSQSVVKGKYLFNTTK--ADLQPRSLPKETRGFLNTNEQNVELS 501
               S   S  P   D S Q V++   + +  +  +D +PR    E+    ++  + +E S
Sbjct: 818  GVAS-GTSSCP---DNSMQEVMEYNTIVDAEQCSSDNEPRESSIESAKSRSSENEPIEQS 873

Query: 502  HYPRSQYRASSSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQKANERPLAMPSRALQLSNR 681
             +  ++ R+  ST    P  TG                +V   N       SRA+QLSNR
Sbjct: 874  -FELAKGRSGLST----PIGTG----------------NVWNENN------SRAIQLSNR 906

Query: 682  ERLLLRKQALKMKNIPMLAVGK 747
            +RLLLRKQAL+MK  P+LAVG+
Sbjct: 907  DRLLLRKQALRMKKRPVLAVGR 928


>ref|XP_003618343.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
            truncatula] gi|355493358|gb|AES74561.1| Chloroplastic
            group IIA intron splicing facilitator CRS1 [Medicago
            truncatula]
          Length = 1096

 Score =  100 bits (248), Expect = 7e-19
 Identities = 90/292 (30%), Positives = 136/292 (46%), Gaps = 43/292 (14%)
 Frame = +1

Query: 1    SKREAMKRSIEAQRRESLKLHVLKLNRNIDELKLKMAKDKDTSDMQLTKALKHGFVEQEI 180
            +K++A+KRSIEAQRRE+LKLHVLKL++NI+ELK +M KD+ +S+ Q+ K L+        
Sbjct: 661  NKKQALKRSIEAQRREALKLHVLKLDKNINELKHQMVKDEASSE-QIAKELRSDLA---- 715

Query: 181  VENRYNEGEISQKDPENDRQSYL--------GDPADETRESH--------GTDATSKADE 312
             EN   E  +  + P  ++   L        G+P   T   H          +  S  ++
Sbjct: 716  TENSPEEASVDNQQPIQEQHIELIGSGGECQGEPESLTGLVHQERQATKNSLEEASVDNQ 775

Query: 313  DPMHNSKGSVDISQRPVRGDVSSQS---------------VVKGKYLFNTTKAD----LQ 435
             P+      +  +    +G+  S +               VV   +  +T KA     + 
Sbjct: 776  QPIQEQHIELIDTGEECQGEPESLTGLVHQERQLDEVDDFVVDTGHSVSTNKASEGSIIS 835

Query: 436  PRSLPKETRGFL--NTNEQNVELSHYPRSQYRASSSTTAYIPPHTGGRGSDGAGYQNAKL 609
             +S P+ +   +  N+NE    L H  R     S S        TG   S     + + +
Sbjct: 836  FKSDPEPSAPVINENSNEFPSSLVHPKRQLDEVSDSVV-----DTGHSVSTNDAMEASII 890

Query: 610  ------EPSVQKANERPLAMPSRALQLSNRERLLLRKQALKMKNIPMLAVGK 747
                  EPS    N+ P+   SR+  LSNRERLLLRKQAL+MK IP++ +GK
Sbjct: 891  SFKRDPEPSAPVINKSPIEFSSRSSSLSNRERLLLRKQALRMKKIPIVPIGK 942


>emb|CBI34982.3| unnamed protein product [Vitis vinifera]
          Length = 1028

 Score = 99.8 bits (247), Expect = 9e-19
 Identities = 87/253 (34%), Positives = 118/253 (46%), Gaps = 4/253 (1%)
 Frame = +1

Query: 1    SKREAMKRSIEAQRRESLKLHVLKLNRNIDELKLKMA---KDKDTSDMQLT-KALKHGFV 168
            +KREA+KRS+EAQRRESLKLHVL+L RNIDELK ++    KDK+T+  QL  K+  H   
Sbjct: 710  NKREALKRSLEAQRRESLKLHVLRLTRNIDELKHQLVSRIKDKETNSKQLVDKSRLH--- 766

Query: 169  EQEIVENRYNEGEISQKDPENDRQSYLGDPADETRESHGTDATSKADEDPMHNSKGSVDI 348
               +   RY    I           +  D  D +R+S  T    K  + P      + + 
Sbjct: 767  ---LARERYGADVI---------LIHSSDGMDSSRDSLQTSHNDKRIDFPSMCDSDTDEA 814

Query: 349  SQRPVRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTNEQNVELSHYPRSQYRA 528
            +  P     SS+SV+K                   ET    + NE+  E +         
Sbjct: 815  NPEP-----SSESVLK-----------------EIETNVLTDMNEEG-ECTTCSEDLVSQ 851

Query: 529  SSSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQKANERPLAMPSRALQLSNRERLLLRKQA 708
              ++   I  H     S     +N    P  +  + R   MP RA  LSNRERLLLRKQA
Sbjct: 852  GETSCYAIVNHEETMESSVKSSKNEFKPPVQRPVDTRSNEMPFRAAPLSNRERLLLRKQA 911

Query: 709  LKMKNIPMLAVGK 747
            L+MK  P++AVG+
Sbjct: 912  LRMKKRPVIAVGR 924


>ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 1044

 Score = 99.8 bits (247), Expect = 9e-19
 Identities = 87/253 (34%), Positives = 118/253 (46%), Gaps = 4/253 (1%)
 Frame = +1

Query: 1    SKREAMKRSIEAQRRESLKLHVLKLNRNIDELKLKMA---KDKDTSDMQLT-KALKHGFV 168
            +KREA+KRS+EAQRRESLKLHVL+L RNIDELK ++    KDK+T+  QL  K+  H   
Sbjct: 710  NKREALKRSLEAQRRESLKLHVLRLTRNIDELKHQLVSRIKDKETNSKQLVDKSRLH--- 766

Query: 169  EQEIVENRYNEGEISQKDPENDRQSYLGDPADETRESHGTDATSKADEDPMHNSKGSVDI 348
               +   RY    I           +  D  D +R+S  T    K  + P      + + 
Sbjct: 767  ---LARERYGADVI---------LIHSSDGMDSSRDSLQTSHNDKRIDFPSMCDSDTDEA 814

Query: 349  SQRPVRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTNEQNVELSHYPRSQYRA 528
            +  P     SS+SV+K                   ET    + NE+  E +         
Sbjct: 815  NPEP-----SSESVLK-----------------EIETNVLTDMNEEG-ECTTCSEDLVSQ 851

Query: 529  SSSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQKANERPLAMPSRALQLSNRERLLLRKQA 708
              ++   I  H     S     +N    P  +  + R   MP RA  LSNRERLLLRKQA
Sbjct: 852  GETSCYAIVNHEETMESSVKSSKNEFKPPVQRPVDTRSNEMPFRAAPLSNRERLLLRKQA 911

Query: 709  LKMKNIPMLAVGK 747
            L+MK  P++AVG+
Sbjct: 912  LRMKKRPVIAVGR 924


>ref|XP_006482481.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X6 [Citrus sinensis]
          Length = 1031

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 87/258 (33%), Positives = 128/258 (49%), Gaps = 9/258 (3%)
 Frame = +1

Query: 1    SKREAMKRSIEAQRRESLKLHVLKLNRNIDELKLKMAKDKDTSDMQLTKALKHGFVEQEI 180
            +KREAMKRS+EAQRR+SLKLHVL+L RNI++LKL++ KDK+ + ++         V++EI
Sbjct: 698  TKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEEI 757

Query: 181  VENRYNEGEISQKDPENDRQSYLGDPADETRESHGTDATSKADEDPMHNSKGSVDISQRP 360
             + +  E   S    E + Q+         R   G D TS        N  G   I   P
Sbjct: 758  GDMQPAECMRSDTSHEVNVQA---------RGECGADLTSTES-----NDTGDATIDGPP 803

Query: 361  -VRGDVSSQSVVKGKYLFNTT--------KADLQPRSLPKETRGFLNTNEQNVELSHYPR 513
             ++ D  ++S+        T+         +D +PR    E+    ++  + +E S +  
Sbjct: 804  AIQQDKQTESLTHNGVASGTSSCPDNSMCSSDNEPRESSIESAKSRSSENEPIEQS-FEL 862

Query: 514  SQYRASSSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQKANERPLAMPSRALQLSNRERLL 693
            ++ R+  ST    P  TG                +V   N       SRA+QLSNR+RLL
Sbjct: 863  AKGRSGLST----PIGTG----------------NVWNENN------SRAIQLSNRDRLL 896

Query: 694  LRKQALKMKNIPMLAVGK 747
            LRKQAL+MK  P+LAVG+
Sbjct: 897  LRKQALRMKKRPVLAVGR 914


>ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X4 [Citrus sinensis]
          Length = 1050

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 85/262 (32%), Positives = 130/262 (49%), Gaps = 13/262 (4%)
 Frame = +1

Query: 1    SKREAMKRSIEAQRRESLKLHVLKLNRNIDELKLKMAKDKDTSDMQLTKALKHGFVEQEI 180
            +KREAMKRS+EAQRR+SLKLHVL+L RNI++LKL++ KDK+ + ++         V++EI
Sbjct: 698  TKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEEI 757

Query: 181  VENRYNEGEISQKDPENDRQSYLGDPADETRESHGTDATSKADEDPMHNSKGSVDISQRP 360
             + +  E   S    E + Q+         R   G D TS        N  G   I   P
Sbjct: 758  GDMQPAECMRSDTSHEVNVQA---------RGECGADLTSTES-----NDTGDATIDGPP 803

Query: 361  -VRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTNEQNVELSHYPRSQYRASSS 537
             ++ D  ++S+    +      +     S P       N+ ++ +E +    ++  +S +
Sbjct: 804  AIQQDKQTESLTHNDFFAEGVASGTS--SCPD------NSMQEVMEYNTIVDAEQCSSDN 855

Query: 538  TTAYIPPHTGGRGSDGAGYQNAKLEPSVQKANERP-LAMP-----------SRALQLSNR 681
                 P  +    +     +N  +E S + A  R  L+ P           SRA+QLSNR
Sbjct: 856  E----PRESSIESAKSRSSENEPIEQSFELAKGRSGLSTPIGTGNVWNENNSRAIQLSNR 911

Query: 682  ERLLLRKQALKMKNIPMLAVGK 747
            +RLLLRKQAL+MK  P+LAVG+
Sbjct: 912  DRLLLRKQALRMKKRPVLAVGR 933


>ref|XP_006431007.1| hypothetical protein CICLE_v10013715mg [Citrus clementina]
            gi|557533064|gb|ESR44247.1| hypothetical protein
            CICLE_v10013715mg [Citrus clementina]
          Length = 1062

 Score = 96.7 bits (239), Expect = 7e-18
 Identities = 84/262 (32%), Positives = 128/262 (48%), Gaps = 13/262 (4%)
 Frame = +1

Query: 1    SKREAMKRSIEAQRRESLKLHVLKLNRNIDELKLKMAKDKDTSDMQLTKALKHGFVEQEI 180
            +KREAMKRS+EAQRR+SLKLHVL+L RNI++LKL++ KDK+ + ++         V   I
Sbjct: 698  TKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVGSII 757

Query: 181  VENRYNEGEISQKDPENDRQSYLGDPADETRESHGTDATSKADEDPMHNSKGSVDISQRP 360
                +    I    PE     +      + R   G D TS        N  G   I   P
Sbjct: 758  FLMIWKSSNI----PEIVFGIFF-----KARGECGADLTSTES-----NDTGDATIDGPP 803

Query: 361  -VRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTNEQNVELSHYPRSQYRASSS 537
             ++ D  ++S+      FN  +++   +S+ KE++  +  +     ++    S    S  
Sbjct: 804  AIQQDKQTESLTHNGISFNEIESESSLKSVSKESQLNMIADFFAEGVASGTPSCPDNSMC 863

Query: 538  TTAYIPPHTGGRGSDGAGYQNAKLEPSVQKANERP-LAMP-----------SRALQLSNR 681
            ++   P  +    +     +N  +E   + A  R  L+ P           SRA+QLSNR
Sbjct: 864  SSDNEPRESSIESAKSRSSENEPIEQCFELAKGRSGLSTPIGTGNVWNENNSRAIQLSNR 923

Query: 682  ERLLLRKQALKMKNIPMLAVGK 747
            +RLLLRKQAL+MK  P+LAVG+
Sbjct: 924  DRLLLRKQALRMKKRPVLAVGR 945


>gb|AAF24608.1|AC010870_1 unknown protein [Arabidopsis thaliana]
          Length = 1020

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 77/249 (30%), Positives = 111/249 (44%)
 Frame = +1

Query: 1    SKREAMKRSIEAQRRESLKLHVLKLNRNIDELKLKMAKDKDTSDMQLTKALKHGFVEQEI 180
            SKREA+KRS+EAQRR+SLKLHVLKL+ NI+EL  ++ +D  T++        +  VE+E 
Sbjct: 692  SKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQLVEDSATNETWSDGESSNMMVEEE- 750

Query: 181  VENRYNEGEISQKDPENDRQSYLGDPADETRESHGTDATSKADEDPMHNSKGSVDISQRP 360
             EN++ E E   K  E     Y  D +  +      +  S+ + DP+  S       +  
Sbjct: 751  TENQHTEPE---KAREKIELGYSSDLSVPSSGEENWEDDSEGEVDPLTTSSQEYQEDE-- 805

Query: 361  VRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTNEQNVELSHYPRSQYRASSST 540
               + +S    +G  L +T    +           F  T   N    H     + +  + 
Sbjct: 806  --SESASSQRHEGNSLDSTANLSV-----------FAETGSANASSFHDRSLPHNSFLNA 852

Query: 541  TAYIPPHTGGRGSDGAGYQNAKLEPSVQKANERPLAMPSRALQLSNRERLLLRKQALKMK 720
               +P  + G GS             +    ER          LSNRERL+LRKQALKMK
Sbjct: 853  NRKLPGSSTGSGS------------QISALRERKSENDGLVTDLSNRERLILRKQALKMK 900

Query: 721  NIPMLAVGK 747
              P  AVG+
Sbjct: 901  KRPPFAVGR 909


>ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana] gi|22531018|gb|AAM97013.1|
            unknown protein [Arabidopsis thaliana]
            gi|37202002|gb|AAQ89616.1| At3g01370 [Arabidopsis
            thaliana] gi|332640136|gb|AEE73657.1| CRM family member 2
            [Arabidopsis thaliana]
          Length = 1011

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 77/249 (30%), Positives = 111/249 (44%)
 Frame = +1

Query: 1    SKREAMKRSIEAQRRESLKLHVLKLNRNIDELKLKMAKDKDTSDMQLTKALKHGFVEQEI 180
            SKREA+KRS+EAQRR+SLKLHVLKL+ NI+EL  ++ +D  T++        +  VE+E 
Sbjct: 683  SKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQLVEDSATNETWSDGESSNMMVEEE- 741

Query: 181  VENRYNEGEISQKDPENDRQSYLGDPADETRESHGTDATSKADEDPMHNSKGSVDISQRP 360
             EN++ E E   K  E     Y  D +  +      +  S+ + DP+  S       +  
Sbjct: 742  TENQHTEPE---KAREKIELGYSSDLSVPSSGEENWEDDSEGEVDPLTTSSQEYQEDE-- 796

Query: 361  VRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTNEQNVELSHYPRSQYRASSST 540
               + +S    +G  L +T    +           F  T   N    H     + +  + 
Sbjct: 797  --SESASSQRHEGNSLDSTANLSV-----------FAETGSANASSFHDRSLPHNSFLNA 843

Query: 541  TAYIPPHTGGRGSDGAGYQNAKLEPSVQKANERPLAMPSRALQLSNRERLLLRKQALKMK 720
               +P  + G GS             +    ER          LSNRERL+LRKQALKMK
Sbjct: 844  NRKLPGSSTGSGS------------QISALRERKSENDGLVTDLSNRERLILRKQALKMK 891

Query: 721  NIPMLAVGK 747
              P  AVG+
Sbjct: 892  KRPPFAVGR 900


>gb|EOY02282.1| CRM family member 2, putative isoform 2 [Theobroma cacao]
          Length = 1045

 Score = 93.6 bits (231), Expect = 6e-17
 Identities = 80/257 (31%), Positives = 134/257 (52%), Gaps = 8/257 (3%)
 Frame = +1

Query: 1    SKREAMKRSIEAQRRESLKLHVLKLNRNIDELKLKMAKDKDTSDMQLTKALKHGFVEQEI 180
            +KR+AMKRS+E QRR+SLKLH+L L RN+++L+ ++  DK+ + MQ  +      V++E+
Sbjct: 690  TKRQAMKRSLEEQRRKSLKLHILNLTRNVNDLEHQLVVDKEANSMQTVEQSSLPLVQEEL 749

Query: 181  VENRYNEGEISQKDPENDRQSYLGDPADETRESHGTDATSKADEDPMHNSKGSVDIS-QR 357
               +  E   S  +       ++     E+R+  G+++TS      M N K    IS ++
Sbjct: 750  ETLQSVEYTGSVIECPASSGGHV-----ESRDKDGSESTS------MKNDKMVATISIRQ 798

Query: 358  PVRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRG----FLNTNEQNVELSHYPRSQYR 525
            P + +    S +   +  + T+++    S+ +++       L+T  + V+ S YP +   
Sbjct: 799  PSKQEFMEPSSIHDGFENHKTESEFSAESVNRKSHATELRALHTQVEMVDTS-YPDNLME 857

Query: 526  ASSSTTAYIPPH-TGGRGSDGAGYQNAK-LEPSVQKANER-PLAMPSRALQLSNRERLLL 696
                + A    H     G   +  ++A  L+ S+  A E     M S A  LSN++RLLL
Sbjct: 858  EIDDSGAINAEHGVSNNGPMESLVESASMLDVSISSAVENVSNKMASTANFLSNKDRLLL 917

Query: 697  RKQALKMKNIPMLAVGK 747
            RKQALKMK  P+LAVG+
Sbjct: 918  RKQALKMKKRPVLAVGR 934


>gb|EOY02281.1| CRM family member 2, putative isoform 1 [Theobroma cacao]
          Length = 1087

 Score = 93.6 bits (231), Expect = 6e-17
 Identities = 80/257 (31%), Positives = 134/257 (52%), Gaps = 8/257 (3%)
 Frame = +1

Query: 1    SKREAMKRSIEAQRRESLKLHVLKLNRNIDELKLKMAKDKDTSDMQLTKALKHGFVEQEI 180
            +KR+AMKRS+E QRR+SLKLH+L L RN+++L+ ++  DK+ + MQ  +      V++E+
Sbjct: 732  TKRQAMKRSLEEQRRKSLKLHILNLTRNVNDLEHQLVVDKEANSMQTVEQSSLPLVQEEL 791

Query: 181  VENRYNEGEISQKDPENDRQSYLGDPADETRESHGTDATSKADEDPMHNSKGSVDIS-QR 357
               +  E   S  +       ++     E+R+  G+++TS      M N K    IS ++
Sbjct: 792  ETLQSVEYTGSVIECPASSGGHV-----ESRDKDGSESTS------MKNDKMVATISIRQ 840

Query: 358  PVRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRG----FLNTNEQNVELSHYPRSQYR 525
            P + +    S +   +  + T+++    S+ +++       L+T  + V+ S YP +   
Sbjct: 841  PSKQEFMEPSSIHDGFENHKTESEFSAESVNRKSHATELRALHTQVEMVDTS-YPDNLME 899

Query: 526  ASSSTTAYIPPH-TGGRGSDGAGYQNAK-LEPSVQKANER-PLAMPSRALQLSNRERLLL 696
                + A    H     G   +  ++A  L+ S+  A E     M S A  LSN++RLLL
Sbjct: 900  EIDDSGAINAEHGVSNNGPMESLVESASMLDVSISSAVENVSNKMASTANFLSNKDRLLL 959

Query: 697  RKQALKMKNIPMLAVGK 747
            RKQALKMK  P+LAVG+
Sbjct: 960  RKQALKMKKRPVLAVGR 976


>ref|XP_003554853.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 1027

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 87/280 (31%), Positives = 130/280 (46%), Gaps = 31/280 (11%)
 Frame = +1

Query: 1    SKREAMKRSIEAQRRESLKLHVLKLNRNIDELKLKMAKDKDTSDMQLTKALKHGFVEQEI 180
            +K++A+KRSIEAQR ESLKLHVLKL+RNI+ELK +MAKD + +  Q +   +    EQ +
Sbjct: 648  NKKQALKRSIEAQRCESLKLHVLKLDRNINELKHQMAKDMEANSKQTSVDNQQAIQEQPV 707

Query: 181  VENRYNEGEISQKDPEND-RQSYLGDPADETRESHGTDATSKADEDPMHNSKGSVDIS-Q 354
                 + G   Q +P N    +Y  + + + +++    +    D      S+    I+  
Sbjct: 708  --ELIDSGGAHQAEPGNSINWNYPKEASVDYQQTMQEQSVELFDGGGAVQSEPQNSINWN 765

Query: 355  RPVRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTNE-----------QNVELS 501
             P    V +Q  ++G+  F            P+ +  + +  E           Q VEL 
Sbjct: 766  SPKEASVDNQQAIQGQ-SFELIDRSEAHHGEPENSIDWNSPEEASVDNQQAIQGQPVELI 824

Query: 502  HYPRSQYRASSSTTAYIPPHTG-GRGSDGAGYQ------NAKLEPSVQKANERP------ 642
                +      S +  IP  T   R SD           +  +E S+  +   P      
Sbjct: 825  DGGGAHQDEPESWSGLIPKETKLDRDSDSVVDTQHCVSISKVMESSIVASESDPDLSALV 884

Query: 643  -----LAMPSRALQLSNRERLLLRKQALKMKNIPMLAVGK 747
                   +PSR++ LSNRERLLLRKQALKMK  P+L+VGK
Sbjct: 885  RDMSSNELPSRSVYLSNRERLLLRKQALKMKKRPVLSVGK 924


>ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 1032

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 78/263 (29%), Positives = 116/263 (44%), Gaps = 14/263 (5%)
 Frame = +1

Query: 1    SKREAMKRSIEAQRRESLKLHVLKLNRNIDELKLKMAKDKDTSDMQLTKALKHGFVEQEI 180
            +K+EA+KRSIEAQRR+SLKLHVLKL +N++ELKLK+ +DK    M+  K           
Sbjct: 684  NKKEALKRSIEAQRRKSLKLHVLKLTQNVEELKLKLDEDKRAIGMESIKT---------- 733

Query: 181  VENRYNEGEISQKDPENDRQSYLGDPADETRESHGTDATSKADEDPMHNSKGSVDISQRP 360
              + + +G+  +   E      L   AD    +H  ++T   + +     KG    S   
Sbjct: 734  --STFQQGK--EGIDEIQTTGSLKLVADSACLTHAENSTCLEENEVAKVKKGHGTHSSGT 789

Query: 361  VRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTNEQNVELSHYPRSQYRASSST 540
            +  D S   +     +F     D    ++          N   V +            S 
Sbjct: 790  ICLDTSVNRLQTTNDVFLIHNGDQSNATVRPSFESVRQGNHAKVPMDTNAEFGTIEPQSG 849

Query: 541  TAYIPPHTGGRGSDGAGY--QNAKLEPSVQKANER------------PLAMPSRALQLSN 678
               +   +    SD   +   N   +PSV+   E+            P   P+   QLSN
Sbjct: 850  ANSLSGESNSGTSDAVHHVAMNKDTKPSVRLEEEKSPPLLSSTRINQPGYFPANVPQLSN 909

Query: 679  RERLLLRKQALKMKNIPMLAVGK 747
            +ERLLLR+QALKMK +P+L+VGK
Sbjct: 910  KERLLLRRQALKMKKLPVLSVGK 932


>ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic-like [Cucumis
            sativus]
          Length = 1053

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 75/255 (29%), Positives = 121/255 (47%), Gaps = 6/255 (2%)
 Frame = +1

Query: 1    SKREAMKRSIEAQRRESLKLHVLKLNRNIDELKLKMAKDKDTSDMQLTKAL-----KHGF 165
            +K+EA+KRSIEAQRR+SLKLHVLKL +N++ELKLK+ +DK    M+  K       K G 
Sbjct: 705  NKKEALKRSIEAQRRKSLKLHVLKLTQNVEELKLKLDEDKRAIGMESIKTSTFQPGKEGI 764

Query: 166  VEQEIVENRYNEGEISQKDPENDRQSYLGDPADETRESHGTDATSKADEDPMHNSKGSVD 345
             E +   +     + +      +      +   + ++ HGT ++     D   N   + +
Sbjct: 765  DEIQTTGSLKLVADSACLTHAENSTCLEENEVAKVKKGHGTHSSGTICLDTSVNRLQTTN 824

Query: 346  ISQRPVRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTNEQNVELSHYPRSQYR 525
                   GD S+ +V   +  F + +     + +P +T     T E     +        
Sbjct: 825  DVFLIHNGDQSNATV---RPSFESVRQGNHAK-VPMDTNAEFGTIEPQSGANSLSGESNS 880

Query: 526  ASSSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQKAN-ERPLAMPSRALQLSNRERLLLRK 702
             +S    ++  +   + S     +  K  P +      +P   P+   QLSN+ERLLLR+
Sbjct: 881  GTSDAVHHVAMNKDTKPS--VRLEEEKSPPLLSSTRINQPGYFPANVPQLSNKERLLLRR 938

Query: 703  QALKMKNIPMLAVGK 747
            QALKMK +P+L+VGK
Sbjct: 939  QALKMKKLPVLSVGK 953