BLASTX nr result

ID: Rehmannia26_contig00000830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00000830
         (604 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315645.1| Photosystem II core complex proteins psbY [P...    56   7e-06

>ref|XP_002315645.1| Photosystem II core complex proteins psbY [Populus trichocarpa]
           gi|118489255|gb|ABK96433.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222864685|gb|EEF01816.1|
           Photosystem II core complex proteins psbY [Populus
           trichocarpa]
          Length = 196

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 30/54 (55%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
 Frame = +2

Query: 455 ILNPKCFNSTNTKNIKPTKQ----FPLLSIQNLPKGLTGAAPQNNAAVTGTAIA 604
           ILN KC +  + KNI PTK       LLS+QNLPKGLT + P +N  +TGTAIA
Sbjct: 10  ILNAKCLSINSNKNISPTKPSTKPVSLLSMQNLPKGLTISKPADNTVLTGTAIA 63


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