BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00029967
         (411 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY24840.1| Tetratricopeptide repeat superfamily protein, put...   175   5e-42
emb|CBI34382.3| unnamed protein product [Vitis vinifera]              173   2e-41
emb|CAN70889.1| hypothetical protein VITISV_005594 [Vitis vinifera]   173   2e-41
gb|EMT24779.1| hypothetical protein F775_14463 [Aegilops tauschii]    149   5e-34
ref|XP_006829023.1| hypothetical protein AMTR_s00001p00250660 [A...   147   1e-33
ref|NP_001047740.1| Os02g0680500 [Oryza sativa Japonica Group] g...   145   7e-33
ref|XP_003572820.1| PREDICTED: pentatricopeptide repeat-containi...   145   7e-33
gb|EEC73788.1| hypothetical protein OsI_08474 [Oryza sativa Indi...   145   7e-33
gb|AFW72803.1| hypothetical protein ZEAMMB73_565260 [Zea mays]        144   9e-33
ref|XP_002454475.1| hypothetical protein SORBIDRAFT_04g031840 [S...   142   6e-32
ref|XP_004953447.1| PREDICTED: pentatricopeptide repeat-containi...   140   2e-31
ref|XP_006648936.1| PREDICTED: pentatricopeptide repeat-containi...   135   6e-30
ref|XP_003593286.1| Pentatricopeptide repeat-containing protein ...   132   4e-29
ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containi...   132   6e-29
ref|XP_004305889.1| PREDICTED: pentatricopeptide repeat-containi...   131   8e-29
ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containi...   130   2e-28
ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containi...   129   5e-28
ref|NP_188283.1| pentatricopeptide repeat-containing protein [Ar...   128   7e-28
ref|XP_004485618.1| PREDICTED: pentatricopeptide repeat-containi...   128   9e-28
gb|EMJ18188.1| hypothetical protein PRUPE_ppa002640mg [Prunus pe...   128   9e-28

>gb|EOY24840.1| Tetratricopeptide repeat superfamily protein, putative [Theobroma
           cacao]
          Length = 718

 Score =  175 bits (444), Expect = 5e-42
 Identities = 81/131 (61%), Positives = 104/131 (79%)
 Frame = +1

Query: 19  VSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAE 198
           V PD +T+L S++AC +L+  I GQ+IHGY+T+ G + DIF++NALIDMY +SGRLD AE
Sbjct: 428 VRPDVITMLASIQACSNLSSFIPGQLIHGYITKAGLICDIFIRNALIDMYGRSGRLDLAE 487

Query: 199 KVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACAHA 378
           KVF EM  +D+GSWNS+I+A+GINGNG  AL  FT+L K     PNAITF ++LSAC+HA
Sbjct: 488 KVFEEMPTKDLGSWNSLIAAYGINGNGRPALHAFTELSKSSPHNPNAITFTNILSACSHA 547

Query: 379 GLVEQGLEIFN 411
           GLVE+G EIFN
Sbjct: 548 GLVEEGYEIFN 558



 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 44/123 (35%), Positives = 68/123 (55%)
 Frame = +1

Query: 13  DNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDS 192
           D  +PD V+ + +L++C     L  G  IHG + ++G   ++FV N+L+DMY K G  + 
Sbjct: 49  DIAAPDSVSTVHALKSCTASRSLELGSCIHGTVLKSGLCTNVFVNNSLLDMYMKCGSTEE 108

Query: 193 AEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACA 372
           A K+F+ M ER++ SW S+IS +  NG     +  F  ++ LE   PN  T  + L A A
Sbjct: 109 ARKLFDHMPERNVASWTSMISGYCHNGLADEGISTF--VQMLENEDPNEFTLAAALQAVA 166

Query: 373 HAG 381
             G
Sbjct: 167 QKG 169



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 3/116 (2%)
 Frame = +1

Query: 37  TLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAEKVFNEM 216
           T+ T L+ C  +  L  G+ +HGYL + GF   I V+N+LIDMYA++ + DSA +VF  M
Sbjct: 330 TMATLLQGCGHIHYLKFGKQLHGYLIKHGFSSCI-VENSLIDMYAENQKSDSAFQVFARM 388

Query: 217 HERDIGSWNSIISAFGINGNGTSALKLFTDLEKL---EATKPNAITFVSVLSACAH 375
           + RDI SWN++I+    NG    AL L  D+      E  +P+ IT ++ + AC++
Sbjct: 389 NVRDIISWNTLITCLVKNGEFREALMLLKDVHNNHGGEMVRPDVITMLASIQACSN 444



 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 43/123 (34%), Positives = 68/123 (55%)
 Frame = +1

Query: 13  DNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDS 192
           +N  P+  TL  +L+A           V+H Y+ ++ F  D F+QN+LI  +AKSG L  
Sbjct: 149 ENEDPNEFTLAAALQAVAQKGNFRFLSVLHSYIVKSRFSVDSFLQNSLIGAFAKSGGLVD 208

Query: 193 AEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACA 372
           A K+      RD+ SW S+ISA+ ++G    AL +F  ++  +   PN +T +S+L AC+
Sbjct: 209 AIKLLERFSSRDVVSWTSVISAYVLHGLMQEALLVFFRMQD-DGVVPNEVTILSILHACS 267

Query: 373 HAG 381
             G
Sbjct: 268 FIG 270


>emb|CBI34382.3| unnamed protein product [Vitis vinifera]
          Length = 705

 Score =  173 bits (438), Expect = 2e-41
 Identities = 84/132 (63%), Positives = 102/132 (77%)
 Frame = +1

Query: 13  DNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDS 192
           D + PDFVT+L S++AC  LA L  GQVIHGY+TR G + DIFVQN+L+DMY K GRL  
Sbjct: 414 DMIYPDFVTILASIQACSSLASLQLGQVIHGYITRAGLICDIFVQNSLVDMYGKCGRLHL 473

Query: 193 AEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACA 372
           AEKV  EM  RD+GSWNS+I+A+GINGNG SAL +F  L+   A +PNAITF ++LSACA
Sbjct: 474 AEKVSEEMPVRDLGSWNSLIAAYGINGNGISALNVFKQLKNTGAHRPNAITFTNILSACA 533

Query: 373 HAGLVEQGLEIF 408
           HAGLV +G EIF
Sbjct: 534 HAGLVAEGFEIF 545



 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 47/120 (39%), Positives = 73/120 (60%)
 Frame = +1

Query: 13  DNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDS 192
           + + P+  TL   L+AC     L   Q+IH ++ +TGF+ D F+QN+LID Y KSG L +
Sbjct: 136 ETLQPNEYTLAVILQACAQKRDLKLVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVA 195

Query: 193 AEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACA 372
           AEK+   +  RD+ SW S+IS   +NG    AL  F ++++ +   PN +T +S+L AC+
Sbjct: 196 AEKLMKRLICRDVVSWTSVISGCVLNGMVEKALLFFFEMQE-DGVSPNTVTILSILQACS 254



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 39/115 (33%), Positives = 63/115 (54%)
 Frame = +1

Query: 28  DFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAEKVF 207
           D +T +  L +C     L  G  IH  + ++G   ++FV N+L+DMYAK GR++ A K+F
Sbjct: 41  DSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKLF 100

Query: 208 NEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACA 372
           + M ++ + SW S++S     G     + +F  +  LE  +PN  T   +L ACA
Sbjct: 101 DHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRM--LETLQPNEYTLAVILQACA 153



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
 Frame = +1

Query: 37  TLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAEKVFNEM 216
           T+ T L+ C     L  G+ IHGY  + GF     V+N+LI MYA++ R D+A ++F +M
Sbjct: 317 TIATLLQGCSHSKCLKLGEQIHGYQIKHGFFPCTIVENSLIYMYAENERDDAAFQLFRKM 376

Query: 217 HERDIGSWNSIISAFGINGNGTSALKLFTDLEK---LEATKPNAITFVSVLSACAHAGLV 387
             RDI SWN++IS+     +   AL L +++      +   P+ +T ++ + AC+    +
Sbjct: 377 SCRDIVSWNTMISSLVKGSSSYQALMLLSEVHSNGGSDMIYPDFVTILASIQACSSLASL 436

Query: 388 EQG 396
           + G
Sbjct: 437 QLG 439


>emb|CAN70889.1| hypothetical protein VITISV_005594 [Vitis vinifera]
          Length = 630

 Score =  173 bits (438), Expect = 2e-41
 Identities = 84/132 (63%), Positives = 102/132 (77%)
 Frame = +1

Query: 13  DNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDS 192
           D + PDFVT+L S++AC  LA L  GQVIHGY+TR G + DIFVQN+L+DMY K GRL  
Sbjct: 350 DMIYPDFVTILASIQACSSLASLQLGQVIHGYITRAGLICDIFVQNSLVDMYGKCGRLHL 409

Query: 193 AEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACA 372
           AEKV  EM  RD+GSWNS+I+A+GINGNG SAL +F  L+   A +PNAITF ++LSACA
Sbjct: 410 AEKVSEEMPVRDLGSWNSLIAAYGINGNGISALNVFKQLKNTGAHRPNAITFTNILSACA 469

Query: 373 HAGLVEQGLEIF 408
           HAGLV +G EIF
Sbjct: 470 HAGLVAEGFEIF 481



 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 8/139 (5%)
 Frame = +1

Query: 13  DNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDS 192
           + + P+  TL   L+AC     L   Q+IH ++ +TGF+ D F+QN+LID Y KSG L +
Sbjct: 136 ETLQPNEYTLAVILQACAQKRDLKLVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVA 195

Query: 193 AEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPN--------AITF 348
           AEK+   +  RD+ SW S+IS   +NG    AL  F ++++ +   PN          T 
Sbjct: 196 AEKLMKRLICRDVVSWTSVISGCVLNGMVEKALLFFFEMQE-DGVSPNTGDGQYLSTETI 254

Query: 349 VSVLSACAHAGLVEQGLEI 405
            ++L  C+H+  ++ G +I
Sbjct: 255 ATLLQGCSHSKCLKLGEQI 273



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 39/115 (33%), Positives = 63/115 (54%)
 Frame = +1

Query: 28  DFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAEKVF 207
           D +T +  L +C     L  G  IH  + ++G   ++FV N+L+DMYAK GR++ A K+F
Sbjct: 41  DSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKLF 100

Query: 208 NEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACA 372
           + M ++ + SW S++S     G     + +F  +  LE  +PN  T   +L ACA
Sbjct: 101 DHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRM--LETLQPNEYTLAVILQACA 153



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 11/143 (7%)
 Frame = +1

Query: 1   KIRRDNVSPDF--------VTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNAL 156
           +++ D VSP+          T+ T L+ C     L  G+ IHGY  + GF     V+N+L
Sbjct: 233 EMQEDGVSPNTGDGQYLSTETIATLLQGCSHSKCLKLGEQIHGYQIKHGFFPCTIVENSL 292

Query: 157 IDMYAKSGRLDSAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEK---LEAT 327
           I MYA++ R D+A ++F +M  RDI SWN++IS+     +   AL L +++      +  
Sbjct: 293 IYMYAENERDDAAFQLFRKMSCRDIVSWNTMISSLVKGSSSYQALMLLSEVHSNGGSDMI 352

Query: 328 KPNAITFVSVLSACAHAGLVEQG 396
            P+ +T ++ + AC+    ++ G
Sbjct: 353 YPDFVTILASIQACSSLASLQLG 375


>gb|EMT24779.1| hypothetical protein F775_14463 [Aegilops tauschii]
          Length = 640

 Score =  149 bits (375), Expect = 5e-34
 Identities = 68/128 (53%), Positives = 98/128 (76%)
 Frame = +1

Query: 25  PDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAEKV 204
           PDFVT+L+ ++AC +  L + GQ++HGY+ + GFL D+ + NALI MYAK GR+DSAEK+
Sbjct: 344 PDFVTVLSVVQACSNAGLHLQGQMLHGYIVKYGFLHDVSISNALIIMYAKLGRIDSAEKI 403

Query: 205 FNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACAHAGL 384
           F  M  +D+ SWNS+I+A+GI+G+G SALK F  L  + A  PNAITF++V+SAC+H+GL
Sbjct: 404 FGRMDVKDLVSWNSMINAYGIHGDGQSALKYFHQLTDVGAHAPNAITFLNVISACSHSGL 463

Query: 385 VEQGLEIF 408
           + +G + F
Sbjct: 464 ISEGYKCF 471



 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 37/98 (37%), Positives = 59/98 (60%)
 Frame = +1

Query: 88  GQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAEKVFNEMHERDIGSWNSIISAFGI 267
           G+++HGYL   GF  D FV  +L++MYAK G + SA ++   +  RD+ SW ++IS   +
Sbjct: 89  GRMVHGYLVTNGFCADPFVVGSLVNMYAKVGDVVSARRLVLRLACRDVVSWTAVISGCVL 148

Query: 268 NGNGTSALKLFTDLEKLEATKPNAITFVSVLSACAHAG 381
           NG    AL +F  + + +   PN +T +SV+ AC+  G
Sbjct: 149 NGMLAEALSVFVMMLE-DGVLPNNVTMLSVIQACSLMG 185



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 1/132 (0%)
 Frame = +1

Query: 4   IRRDNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGR 183
           +RR  V  +   L   L  C   A  ++G+ IH +L +   L  I ++N L+ MYA+  R
Sbjct: 234 LRRGTVCSNADVLGALLYGCTVSASPLYGREIHAHLIKLSALPSISIENCLMGMYARFER 293

Query: 184 LDSAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEK-LEATKPNAITFVSVL 360
           +D+    F  M  +DI SWN++IS    +     AL LF+ L        P+ +T +SV+
Sbjct: 294 VDATYLAFKGMKVKDIVSWNTMISCLAKSDYVNEALDLFSTLHSGGSGLVPDFVTVLSVV 353

Query: 361 SACAHAGLVEQG 396
            AC++AGL  QG
Sbjct: 354 QACSNAGLHLQG 365


>ref|XP_006829023.1| hypothetical protein AMTR_s00001p00250660 [Amborella trichopoda]
           gi|548834002|gb|ERM96439.1| hypothetical protein
           AMTR_s00001p00250660 [Amborella trichopoda]
          Length = 771

 Score =  147 bits (371), Expect = 1e-33
 Identities = 70/136 (51%), Positives = 99/136 (72%), Gaps = 2/136 (1%)
 Frame = +1

Query: 7   RRD--NVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSG 180
           RRD  N+ PD +T+L +L+ C  LA L  G++IH ++ ++G   DI++ N+LIDMYAKSG
Sbjct: 482 RRDCNNIRPDSITMLVALQGCAQLASLHKGEIIHAFIMKSGLEFDIYIGNSLIDMYAKSG 541

Query: 181 RLDSAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVL 360
           RLD +E+VF EM  +D+GSWNS+ISA+G +G G S+L+LF  ++ L   +P+  T V VL
Sbjct: 542 RLDLSEQVFTEMPGKDLGSWNSMISAYGTHGYGNSSLELFNKMQNLGIQEPDQRTLVCVL 601

Query: 361 SACAHAGLVEQGLEIF 408
           SAC H+GL+E GL IF
Sbjct: 602 SACVHSGLIEHGLNIF 617



 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 49/136 (36%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
 Frame = +1

Query: 1   KIRRDNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTG-FLGDIFVQNALIDMYAKS 177
           ++R  ++ PD VT+  ++ AC  L  L  GQ +HG + + G    D+ + N+L+DMY K 
Sbjct: 76  QLRECHLLPDRVTMSKAINACASLNNLDFGQSVHGEMVKLGPGFSDVILYNSLVDMYVKC 135

Query: 178 GRLDSAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSV 357
           G L  A +VF+ M+ER++ SW S+IS F  NG    +++LF+ L + +   PN  T   +
Sbjct: 136 GSLVVARQVFDRMNERNVVSWTSMISGFLRNGASRESMELFSQLIR-DCVWPNEFTMAVL 194

Query: 358 LSACAHAGLVEQGLEI 405
           L ACA  G +++G  +
Sbjct: 195 LRACAQVGELKKGQSV 210



 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 49/121 (40%), Positives = 67/121 (55%)
 Frame = +1

Query: 10  RDNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLD 189
           RD V P+  T+   L AC  +  L  GQ +H YL R       F++N+LIDMY K G L 
Sbjct: 181 RDCVWPNEFTMAVLLRACAQVGELKKGQSVHAYLIRNWCFESGFLENSLIDMYIKCGSLV 240

Query: 190 SAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSAC 369
           SA+ VF+ M  RD+ SW  +I  F +NG    AL LF  + + E   PN+ T  +++ AC
Sbjct: 241 SAQTVFDRMGFRDVVSWTCLIDGFVVNGLIDEALMLFHQMGQ-EKVTPNSYTVSNIIRAC 299

Query: 370 A 372
           A
Sbjct: 300 A 300



 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 48/133 (36%), Positives = 77/133 (57%), Gaps = 13/133 (9%)
 Frame = +1

Query: 43  LTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAEKVFNEMHE 222
           + SL  C D   L  G+ IHGYL + G+L  + ++N+L+DMY+K G +D   ++F EM +
Sbjct: 394 MASLLQCCDS--LKEGKGIHGYLVKHGYLPFLMIENSLMDMYSKHGEIDPVRQLFLEMPK 451

Query: 223 RDIGSWNSIISAFGINGNGTSALKLFTDLEKLEAT--KPNAITFVSVLSACA-------- 372
           RDI SWN++I  +  NG+   AL+LF  + + +    +P++IT +  L  CA        
Sbjct: 452 RDIVSWNTLILCYVHNGHTVGALELFAKIHRRDCNNIRPDSITMLVALQGCAQLASLHKG 511

Query: 373 ---HAGLVEQGLE 402
              HA +++ GLE
Sbjct: 512 EIIHAFIMKSGLE 524


>ref|NP_001047740.1| Os02g0680500 [Oryza sativa Japonica Group]
           gi|50253137|dbj|BAD29383.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|113537271|dbj|BAF09654.1| Os02g0680500 [Oryza
           sativa Japonica Group] gi|222623447|gb|EEE57579.1|
           hypothetical protein OsJ_07931 [Oryza sativa Japonica
           Group]
          Length = 418

 Score =  145 bits (365), Expect = 7e-33
 Identities = 66/132 (50%), Positives = 100/132 (75%)
 Frame = +1

Query: 13  DNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDS 192
           D + PDFVT+L+ ++AC +  LL  GQ++HGY+ ++G L D+ + NALI MYAK GR+D 
Sbjct: 117 DGLVPDFVTVLSVVQACSNAGLLQQGQMLHGYIIKSGSLYDVSICNALISMYAKLGRIDF 176

Query: 193 AEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACA 372
           +E++F +M  +DI SWNS+I+A+GI+G+G S+L++F +L+      PNAITFVS++SAC+
Sbjct: 177 SEQIFEQMDIKDIVSWNSMINAYGIHGDGLSSLRIFNELQDDGTCSPNAITFVSLISACS 236

Query: 373 HAGLVEQGLEIF 408
           H+GLV +G   F
Sbjct: 237 HSGLVSEGYRCF 248



 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 41/113 (36%), Positives = 70/113 (61%)
 Frame = +1

Query: 58  ACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAEKVFNEMHERDIGS 237
           +C     L +G+ IH +L +   L  I ++N+L+ MYA+  ++D+A  VF  M  +DI S
Sbjct: 30  SCTVSGSLKYGKGIHAHLIKMNDLPSISIENSLMGMYARFEQVDAAYVVFKGMQIKDIVS 89

Query: 238 WNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACAHAGLVEQG 396
           WN++IS    + +   AL+LF+ L   +   P+ +T +SV+ AC++AGL++QG
Sbjct: 90  WNTMISCLAKSDHVDEALELFSILHGGDGLVPDFVTVLSVVQACSNAGLLQQG 142


>ref|XP_003572820.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Brachypodium distachyon]
          Length = 412

 Score =  145 bits (365), Expect = 7e-33
 Identities = 64/128 (50%), Positives = 97/128 (75%)
 Frame = +1

Query: 25  PDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAEKV 204
           PDFVT+L+ ++AC    LL+ GQ++HGY+T+ GF+ D+ + N LI MYAK GR+DSAE++
Sbjct: 116 PDFVTVLSVVQACSSAGLLLQGQMLHGYITKYGFVQDVSICNVLISMYAKLGRIDSAEQI 175

Query: 205 FNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACAHAGL 384
           F +M+ +D+ SWNS+I+++G++G+G SAL+ F  L       PNAITF+SV+SAC+H+GL
Sbjct: 176 FKQMNAKDLVSWNSMINSYGVHGDGRSALRYFYQLIDAGTHTPNAITFLSVISACSHSGL 235

Query: 385 VEQGLEIF 408
           + +G   F
Sbjct: 236 ISEGYMCF 243



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
 Frame = +1

Query: 58  ACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAEKVFNEMHERDIGS 237
           +C     L +G+ +H +L +T     I ++N L+ MYA+   +DSA  VF  M  +DI S
Sbjct: 22  SCTVSGSLKNGREVHAHLIKTSAFPSISIENCLMGMYARFEEVDSAHLVFKGMQFKDIVS 81

Query: 238 WNSIISAFGINGNGTSALKLFTDLE---KLEATKPNAITFVSVLSACAHAGLVEQG 396
           WN++IS    +     AL+LF+ L          P+ +T +SV+ AC+ AGL+ QG
Sbjct: 82  WNTMISCLAKSDYVNEALELFSTLHGGGGGGGLVPDFVTVLSVVQACSSAGLLLQG 137


>gb|EEC73788.1| hypothetical protein OsI_08474 [Oryza sativa Indica Group]
          Length = 418

 Score =  145 bits (365), Expect = 7e-33
 Identities = 66/132 (50%), Positives = 100/132 (75%)
 Frame = +1

Query: 13  DNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDS 192
           D + PDFVT+L+ ++AC +  LL  GQ++HGY+ ++G L D+ + NALI MYAK GR+D 
Sbjct: 117 DGLVPDFVTVLSVVQACSNAGLLQQGQMLHGYIIKSGSLYDVSICNALISMYAKLGRIDF 176

Query: 193 AEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACA 372
           +E++F +M  +DI SWNS+I+A+GI+G+G S+L++F +L+      PNAITFVS++SAC+
Sbjct: 177 SEQIFEQMDIKDIVSWNSMINAYGIHGDGLSSLRIFNELQDDGTCSPNAITFVSLISACS 236

Query: 373 HAGLVEQGLEIF 408
           H+GLV +G   F
Sbjct: 237 HSGLVSEGYRCF 248



 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 41/113 (36%), Positives = 70/113 (61%)
 Frame = +1

Query: 58  ACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAEKVFNEMHERDIGS 237
           +C     L +G+ IH +L +   L  I ++N+L+ MYA+  ++D+A  VF  M  +DI S
Sbjct: 30  SCTVSGSLKYGKGIHAHLIKMNDLPSISIENSLMGMYARFEQVDAAYVVFKGMQIKDIVS 89

Query: 238 WNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACAHAGLVEQG 396
           WN++IS    + +   AL+LF+ L   +   P+ +T +SV+ AC++AGL++QG
Sbjct: 90  WNTMISCLAKSDHVDEALELFSILHGGDGLVPDFVTVLSVVQACSNAGLLQQG 142


>gb|AFW72803.1| hypothetical protein ZEAMMB73_565260 [Zea mays]
          Length = 709

 Score =  144 bits (364), Expect = 9e-33
 Identities = 67/130 (51%), Positives = 99/130 (76%)
 Frame = +1

Query: 19  VSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAE 198
           ++PDFVT+L+ L+AC +  LL  GQ++HGY+ ++GF+ D+ + NALI MYAK GR+D AE
Sbjct: 411 LAPDFVTVLSMLQACSNAGLLHQGQMLHGYVMKSGFVYDVSICNALISMYAKLGRIDFAE 470

Query: 199 KVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACAHA 378
            +F  M  +D+ SWNS+I+A+G++G+G SAL++F  L+      PNAITFVSV+SAC+H+
Sbjct: 471 MIFERMDIKDLVSWNSMINAYGMHGDGHSALRVFHQLKDAGTPAPNAITFVSVISACSHS 530

Query: 379 GLVEQGLEIF 408
           GLV +G + F
Sbjct: 531 GLVSEGHKCF 540



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
 Frame = +1

Query: 40  LLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAEKVFNEMH 219
           L   L  C     + +G+ +H +  + G    I V+N+L+ MYA+  ++D+A  VF  M 
Sbjct: 314 LAAVLYGCTISGSVKNGEGLHAHTIKMGAFPSISVENSLMGMYARFEQIDAALLVFEGME 373

Query: 220 ERDIGSWNSIISAFGINGNGTSALKLFTDLEKLE--ATKPNAITFVSVLSACAHAGLVEQ 393
            +DI SWN+IIS          A+ +F+ L         P+ +T +S+L AC++AGL+ Q
Sbjct: 374 VKDIVSWNTIISCLAKTDRVNEAMDIFSVLHAAAGGGLAPDFVTVLSMLQACSNAGLLHQ 433

Query: 394 G 396
           G
Sbjct: 434 G 434



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 43/126 (34%), Positives = 67/126 (53%)
 Frame = +1

Query: 13  DNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDS 192
           D V P+  T    ++AC         +++HGYL   GF  D FV  +L++MYAK G + S
Sbjct: 132 DVVRPNEFTAAAVVQACGLARDERLARMVHGYLVAGGFCDDPFVLGSLVNMYAKVGDVAS 191

Query: 193 AEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACA 372
           A ++   +  RD+ SW +I+S   +N     AL +F  + + +   PN +T +SV+ ACA
Sbjct: 192 ARRLLLGLPCRDVVSWTAIVSGCVLNAMLEEALGVFLMMLE-DGVLPNNVTMLSVIQACA 250

Query: 373 HAGLVE 390
             G  E
Sbjct: 251 LMGASE 256


>ref|XP_002454475.1| hypothetical protein SORBIDRAFT_04g031840 [Sorghum bicolor]
           gi|241934306|gb|EES07451.1| hypothetical protein
           SORBIDRAFT_04g031840 [Sorghum bicolor]
          Length = 706

 Score =  142 bits (357), Expect = 6e-32
 Identities = 65/130 (50%), Positives = 98/130 (75%)
 Frame = +1

Query: 19  VSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAE 198
           ++PDFVT+L+ L+AC +  LL  GQ++HGY+ ++GF+ D+ + NALI MYAK GR+D AE
Sbjct: 408 LAPDFVTVLSILQACSNAGLLHQGQMLHGYIMKSGFVYDVSICNALITMYAKLGRIDFAE 467

Query: 199 KVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACAHA 378
            +F  M  +D+ SWNS+I+A+G++G+G  AL++F  L+      PNAITFVSV+SAC+H+
Sbjct: 468 MIFERMDIKDLVSWNSMINAYGMHGDGHLALRVFHQLKDAGTPVPNAITFVSVISACSHS 527

Query: 379 GLVEQGLEIF 408
           GL+ +G + F
Sbjct: 528 GLISEGYKCF 537



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 45/124 (36%), Positives = 70/124 (56%)
 Frame = +1

Query: 19  VSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAE 198
           V P+  T    L+AC        G+++HGYL   GF GD FV  +L++MYAK+G + SA 
Sbjct: 132 VRPNEFTAAAVLQACGLARDERLGRMVHGYLVAGGFCGDPFVVGSLVNMYAKAGDVVSAR 191

Query: 199 KVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACAHA 378
           ++   +  RD+ SW +IIS   +NG     L++F  + + +   PN +T +SV+ AC+  
Sbjct: 192 RLVLGLPCRDVVSWTAIISGCVLNGMLEEGLEVFVMMLE-DGVLPNNVTMLSVIQACSLM 250

Query: 379 GLVE 390
           G  E
Sbjct: 251 GASE 254



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
 Frame = +1

Query: 4   IRRDNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGR 183
           ++  NV  +   L   L  C     + +G  +H +  + G    I ++N+L+ MYA+  +
Sbjct: 300 LKSGNVCSNEDVLAAVLYGCTISGSVKNGVGVHAHTIKIGAFPSISIENSLMGMYARFEQ 359

Query: 184 LDSAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLE-ATKPNAITFVSVL 360
           +D+A  VF  M  +DI SWN+IIS    +     A++LF+ L        P+ +T +S+L
Sbjct: 360 IDAAHFVFEGMKVKDIVSWNTIISCLAKSDRVNEAMELFSVLHAAAGGLAPDFVTVLSIL 419

Query: 361 SACAHAGLVEQG 396
            AC++AGL+ QG
Sbjct: 420 QACSNAGLLHQG 431


>ref|XP_004953447.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Setaria italica]
          Length = 706

 Score =  140 bits (353), Expect = 2e-31
 Identities = 65/134 (48%), Positives = 97/134 (72%)
 Frame = +1

Query: 7   RRDNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRL 186
           R   + PD VT+L+ ++AC +  LL  GQ++HG + ++GF+ D+ + NALI MYAK GR+
Sbjct: 404 RGGGLVPDLVTVLSIVQACSNAGLLHQGQMLHGCIMKSGFVYDVSICNALISMYAKLGRI 463

Query: 187 DSAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSA 366
           D AE +F  M  +D+ SWNS+I+A+G++G+G SAL++F  L+      PNAITFVSV+SA
Sbjct: 464 DFAEMIFERMDIKDLVSWNSMITAYGMHGDGHSALRIFNQLKDAGTPSPNAITFVSVISA 523

Query: 367 CAHAGLVEQGLEIF 408
           C+HAGL+ +G + F
Sbjct: 524 CSHAGLISEGYKCF 537



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 46/124 (37%), Positives = 69/124 (55%)
 Frame = +1

Query: 19  VSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAE 198
           V P+  T    L+AC        G+++HGYL   GF GD FV  +L++MYAK G   SA 
Sbjct: 132 VRPNEFTASVILQACGLARDGRLGRMVHGYLIAGGFCGDPFVVGSLVNMYAKVGDAASAR 191

Query: 199 KVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACAHA 378
           ++   +  RD+ SW +IIS   +NG    AL++F  + + +   PN +T +SV+ AC+  
Sbjct: 192 RLVFGLSCRDVVSWTAIISGCVLNGMLDEALEVFVMMLE-DGVLPNNVTMLSVIQACSLM 250

Query: 379 GLVE 390
           G  E
Sbjct: 251 GASE 254



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
 Frame = +1

Query: 4   IRRDNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGR 183
           ++  NV  +   L   L  C       +G+ IH +L + G    I V N+L+ MYA+  +
Sbjct: 300 LKSGNVCSNEDVLAAILYGCTISGSQKNGEGIHAHLIKMGAFPSISVGNSLMGMYARFEQ 359

Query: 184 LDSAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLE-KLEATKPNAITFVSVL 360
           +D+   VF  M  +DI SWN+IIS    + +   A++LF+ L  +     P+ +T +S++
Sbjct: 360 VDAVHLVFGVMEVKDIVSWNTIISCLAKSDHVNEAMELFSVLHARGGGLVPDLVTVLSIV 419

Query: 361 SACAHAGLVEQG 396
            AC++AGL+ QG
Sbjct: 420 QACSNAGLLHQG 431


>ref|XP_006648936.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Oryza brachyantha]
          Length = 617

 Score =  135 bits (340), Expect = 6e-30
 Identities = 61/128 (47%), Positives = 94/128 (73%)
 Frame = +1

Query: 25  PDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAEKV 204
           PD VT+L+ ++AC +  LL  GQ+ HGY+ ++G L D+ + NALI MYAK GR+D ++++
Sbjct: 320 PDVVTVLSIVQACSNAGLLQQGQMFHGYIIKSGSLYDVSICNALISMYAKLGRIDFSQQI 379

Query: 205 FNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACAHAGL 384
           F  M  +DI SWNS+I+A+G++G+G S+L++F +L+      PNAITF S++SAC+H+GL
Sbjct: 380 FERMDVKDIVSWNSMINAYGMHGDGLSSLRIFNELQNDGTHSPNAITFTSLISACSHSGL 439

Query: 385 VEQGLEIF 408
           V +G   F
Sbjct: 440 VSEGYRCF 447



 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 46/131 (35%), Positives = 75/131 (57%)
 Frame = +1

Query: 4   IRRDNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGR 183
           +RR NV  +   L   L  C     L +G+ IH  L +T     + ++N L+ MYA+  +
Sbjct: 211 LRRGNVCSNADVLSALLYGCTVSGSLKYGKGIHARLIKTNAFPSVSIENCLMGMYARFEQ 270

Query: 184 LDSAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLS 363
           +D+A  VF  M ++DI SWN++IS    N N   A++LF+ L       P+ +T +S++ 
Sbjct: 271 VDAAYVVFKGMKDKDIVSWNTLISCLAKNDNVNEAVELFSILHGGGGLMPDVVTVLSIVQ 330

Query: 364 ACAHAGLVEQG 396
           AC++AGL++QG
Sbjct: 331 ACSNAGLLQQG 341



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 43/125 (34%), Positives = 71/125 (56%)
 Frame = +1

Query: 25  PDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAEKV 204
           P+  T    L+AC        G+++HG+L  +GF  D FV  +L++MYAK G + SAE++
Sbjct: 45  PNEFTAAALLQACGLARDARLGRMVHGHLVASGFCSDSFVVGSLVNMYAKVGDVVSAEEL 104

Query: 205 FNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACAHAGL 384
              +  RD+ SW +++S   +NG    AL +F  + + +   PN +T +S++ AC+  G 
Sbjct: 105 LLGLDFRDVVSWTALVSGCVLNGMLAEALDVFVMMLE-DNVLPNNVTMLSIIQACSLMG- 162

Query: 385 VEQGL 399
            E GL
Sbjct: 163 -ESGL 166


>ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355482334|gb|AES63537.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 622

 Score =  132 bits (333), Expect = 4e-29
 Identities = 67/136 (49%), Positives = 94/136 (69%)
 Frame = +1

Query: 1   KIRRDNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSG 180
           K+R +   P++VTLL  + AC +L+   HG VIHGY+ + G    IFV NALI+MYAK G
Sbjct: 365 KMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCG 424

Query: 181 RLDSAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVL 360
            LD + K+F EM  RD  +WNS+ISA+G++G G  AL+ F ++ K    K +A+TF++VL
Sbjct: 425 SLDDSRKIFLEMPSRDSVTWNSMISAYGLHGYGEQALQHFYEM-KERGVKLDAVTFLAVL 483

Query: 361 SACAHAGLVEQGLEIF 408
           SAC HAGLV +G ++F
Sbjct: 484 SACNHAGLVTEGQQLF 499



 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
 Frame = +1

Query: 13  DNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGR-LD 189
           + VSP+ VTL+  L AC     + +G+ IHGY  R GF        ALI +Y + G+ L 
Sbjct: 267 EGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLH 326

Query: 190 SAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSAC 369
            AE++F     RD+  W+SII ++   G    ALKLF  + + E T+PN +T ++V+SAC
Sbjct: 327 LAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKM-RTEETEPNYVTLLAVISAC 385

Query: 370 AHAGLVEQG 396
            +    + G
Sbjct: 386 TNLSSFKHG 394



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
 Frame = +1

Query: 88  GQVIHGYLTRTGFLG---DIFVQNALIDMYAKSGRLDSAEKVFNEMHERDIGSWNSIISA 258
           G+ IHG +   G +     +F+  A +D Y + G    A  VF+EM  ++  SW ++IS 
Sbjct: 188 GRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISG 247

Query: 259 FGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACAHAGLVEQGLEI 405
              N +   AL  + +++ +E   PN +T +++L+ACA  G V+ G EI
Sbjct: 248 CANNQDYDVALACYREMQ-VEGVSPNRVTLIALLAACARPGFVKYGKEI 295


>ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Glycine max]
          Length = 601

 Score =  132 bits (331), Expect = 6e-29
 Identities = 66/136 (48%), Positives = 96/136 (70%)
 Frame = +1

Query: 1   KIRRDNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSG 180
           K+R + + P++VTLL  + AC +L+ L HG  +HGY+ + GF   I V NALI+MYAK G
Sbjct: 346 KMRTEEIEPNYVTLLAVISACTNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCG 405

Query: 181 RLDSAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVL 360
            L+ + K+F EM  RD  +W+S+ISA+G++G G  AL++F ++ +    KP+AITF++VL
Sbjct: 406 CLNGSRKMFLEMPNRDNVTWSSLISAYGLHGCGEQALQIFYEMNE-RGVKPDAITFLAVL 464

Query: 361 SACAHAGLVEQGLEIF 408
           SAC HAGLV +G  IF
Sbjct: 465 SACNHAGLVAEGQRIF 480



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 1/132 (0%)
 Frame = +1

Query: 4   IRRDNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGR 183
           ++ + V P+ VT +  L AC +   + HG+ IHGY  R GF       +AL++MY + G 
Sbjct: 245 MQAEGVCPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQCGE 304

Query: 184 -LDSAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVL 360
            +  AE +F     RD+  W+SII +F   G+   ALKLF  + + E  +PN +T ++V+
Sbjct: 305 PMHLAELIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKM-RTEEIEPNYVTLLAVI 363

Query: 361 SACAHAGLVEQG 396
           SAC +   ++ G
Sbjct: 364 SACTNLSSLKHG 375



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
 Frame = +1

Query: 88  GQVIHGYLTRTGFLGD-IFVQNALIDMYAKSGRLDSAEKVFNEMHERDIGSWNSIISAFG 264
           G+ IH  +     +G  +F+  AL+D Y + G    A +VF+ M  +++ SW ++IS   
Sbjct: 171 GRQIHALVVVNERIGQSMFLSTALVDFYFRCGDSLMALRVFDGMEVKNVVSWTTMISGCI 230

Query: 265 INGNGTSALKLFTDLEKLEATKPNAITFVSVLSACAHAGLVEQGLEI 405
            + +   A   F  ++  E   PN +T +++LSACA  G V+ G EI
Sbjct: 231 AHQDYDEAFACFRAMQA-EGVCPNRVTSIALLSACAEPGFVKHGKEI 276


>ref|XP_004305889.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Fragaria vesca subsp. vesca]
          Length = 739

 Score =  131 bits (330), Expect = 8e-29
 Identities = 63/133 (47%), Positives = 94/133 (70%)
 Frame = +1

Query: 10  RDNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLD 189
           R+   PD  T  + L AC +LA L  G+ +H  + +TG+L D+FV NALI MYAK G + 
Sbjct: 445 REGKRPDQSTFSSGLSACANLAALQVGRQLHHLVVKTGYLNDLFVSNALISMYAKCGMVV 504

Query: 190 SAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSAC 369
           SA++VF +++  DI SWNS+IS + +NG G  A++LF +++ +E   P+ +TFV VLSAC
Sbjct: 505 SAKQVFKDINHGDIVSWNSLISGYALNGYGEEAVELFEEMQ-IEGLNPDQLTFVGVLSAC 563

Query: 370 AHAGLVEQGLEIF 408
           +H+GLV++GLE+F
Sbjct: 564 SHSGLVDRGLEVF 576



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 40/136 (29%), Positives = 70/136 (51%)
 Frame = +1

Query: 1   KIRRDNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSG 180
           KI RD    D V+  T +   V    L   + +   L R  +  +I  Q A+I  YA +G
Sbjct: 283 KIFRDMPEMDSVSWTTMINGYVRAGKLEEAREL---LNRMPYK-NIGAQTAMISGYAHNG 338

Query: 181 RLDSAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVL 360
           R+D A ++FN++  RD   WN++I+ +   G    AL LF  +     T  +A+++ +++
Sbjct: 339 RMDEASQIFNQIAIRDAVCWNTMIAGYAQCGRMVEALSLFRKM-----TNKDAVSWNTMI 393

Query: 361 SACAHAGLVEQGLEIF 408
           +  A  G +++ L+IF
Sbjct: 394 TGYAQVGEMDKALQIF 409



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/86 (36%), Positives = 51/86 (59%)
 Frame = +1

Query: 148 NALIDMYAKSGRLDSAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEAT 327
           N +I  YA+ G +D A ++F +M E++  SWNS+I+ +  NG    AL+  T +   E  
Sbjct: 390 NTMITGYAQVGEMDKALQIFEQMGEKNTVSWNSLITGYVQNGLYLDALE-STVVMGREGK 448

Query: 328 KPNAITFVSVLSACAHAGLVEQGLEI 405
           +P+  TF S LSACA+   ++ G ++
Sbjct: 449 RPDQSTFSSGLSACANLAALQVGRQL 474


>ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Brachypodium distachyon]
          Length = 773

 Score =  130 bits (327), Expect = 2e-28
 Identities = 57/132 (43%), Positives = 94/132 (71%)
 Frame = +1

Query: 13  DNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDS 192
           ++V P+  TL+T + AC +LA L HG+++H Y+   G   D+ +  AL+DMY K G+L +
Sbjct: 521 EDVKPNSSTLITVISACANLAALEHGELLHSYVKNMGLESDVSISTALVDMYTKCGQLGT 580

Query: 193 AEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACA 372
           A  +F+ M +RD+ +WN +IS +G++G    ALKLF+++E   + KPN++TF+++LSAC 
Sbjct: 581 ARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEME-AGSIKPNSLTFLAILSACC 639

Query: 373 HAGLVEQGLEIF 408
           HAGLV++G ++F
Sbjct: 640 HAGLVDEGRKLF 651



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
 Frame = +1

Query: 28  DFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAEKVF 207
           D  +L++++ +C  L  L  GQ +H Y  +   L +  + N+LI MY + G  + A K+F
Sbjct: 425 DITSLVSAISSCSRLGRLRLGQSVHCYSIKC-LLDENSITNSLIGMYGRCGNFELACKIF 483

Query: 208 NEMH-ERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACAHAGL 384
                 RD+ +WN++IS++   G    AL L+  +   E  KPN+ T ++V+SACA+   
Sbjct: 484 AVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQM-LTEDVKPNSSTLITVISACANLAA 542

Query: 385 VEQG 396
           +E G
Sbjct: 543 LEHG 546



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 6/138 (4%)
 Frame = +1

Query: 1   KIRRDNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFL---GDIFVQNALIDMYA 171
           ++R     P   T   +  A  +LA L  G  +H Y  + G L   G + V ++L+ MYA
Sbjct: 103 RMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAGDGSVAVSSSLVYMYA 162

Query: 172 KSGRLDSAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKL---EATKPNAI 342
           + G L  A K+F+EM ERD+ +W +++S    NG     +     + +L      +PN+ 
Sbjct: 163 RCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIRLAGDSGARPNSR 222

Query: 343 TFVSVLSACAHAGLVEQG 396
           T  S L AC   G +  G
Sbjct: 223 TMESGLEACGVLGELSAG 240



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 39/124 (31%), Positives = 64/124 (51%)
 Frame = +1

Query: 25  PDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAEKV 204
           P+  T+ + LEAC  L  L  G+ +HGY  + G      V +AL  MY+K    + A  +
Sbjct: 219 PNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMTEDACIL 278

Query: 205 FNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACAHAGL 384
           F E+ E+D+ SW  +I A+   G    A++LF ++E+    +P+ +    VLS    +  
Sbjct: 279 FPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQ-SGLQPDEVLVSCVLSGLGSSAN 337

Query: 385 VEQG 396
           V +G
Sbjct: 338 VNRG 341



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
 Frame = +1

Query: 1   KIRRDNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSG 180
           ++ +  + PD V +   L      A +  G+  H  + R  F   + + N+LI MY K  
Sbjct: 312 EMEQSGLQPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFE 371

Query: 181 RLDSAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATK--PNAITFVS 354
            +D A  VF  +H+RD  SW+ +++ +   G     L+L+  ++  +  +   +  + VS
Sbjct: 372 LVDVAGTVFGMLHQRDDESWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVS 431

Query: 355 VLSACAHAGLVEQGLEI 405
            +S+C+  G +  G  +
Sbjct: 432 AISSCSRLGRLRLGQSV 448


>ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 694

 Score =  129 bits (323), Expect = 5e-28
 Identities = 63/136 (46%), Positives = 89/136 (65%)
 Frame = +1

Query: 4   IRRDNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGR 183
           +RRD    D+ T    L AC DLA L  G+  H  L R+G++GD F  NALI  YAK GR
Sbjct: 441 MRRDAKRADWSTYACCLSACADLAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGR 500

Query: 184 LDSAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLS 363
           +  A +VF+EM   DI SWN++I  +  NG+GT A+ +F ++E  +  +P+ +TFV VLS
Sbjct: 501 ILEARQVFDEMPAPDIVSWNALIDGYASNGHGTEAISVFREMEDND-VRPDEVTFVGVLS 559

Query: 364 ACAHAGLVEQGLEIFN 411
           AC+HAGL+++G + FN
Sbjct: 560 ACSHAGLIDEGFDFFN 575


>ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g16610 gi|11994615|dbj|BAB02752.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|332642322|gb|AEE75843.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  128 bits (322), Expect = 7e-28
 Identities = 61/137 (44%), Positives = 91/137 (66%)
 Frame = +1

Query: 1   KIRRDNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSG 180
           ++R   + PD  TLL  L AC  LA L HG   HGY    G+  +  + NAL+DMY K G
Sbjct: 399 EMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCG 458

Query: 181 RLDSAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVL 360
           +LD A++VF+ MH+RDI SWN+++  FGI+G G  AL LF  +++     P+ +T +++L
Sbjct: 459 KLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQE-TGVNPDEVTLLAIL 517

Query: 361 SACAHAGLVEQGLEIFN 411
           SAC+H+GLV++G ++FN
Sbjct: 518 SACSHSGLVDEGKQLFN 534



 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 47/132 (35%), Positives = 75/132 (56%)
 Frame = +1

Query: 1   KIRRDNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSG 180
           K+    V P   T    L+AC  L  +  G++IH ++  + F  D++V  AL+D YAK G
Sbjct: 93  KMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCG 152

Query: 181 RLDSAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVL 360
            L+ A KVF+EM +RD+ +WN++IS F ++   T  + LF D+ +++   PN  T V + 
Sbjct: 153 ELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMF 212

Query: 361 SACAHAGLVEQG 396
            A   AG + +G
Sbjct: 213 PALGRAGALREG 224



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 40/126 (31%), Positives = 69/126 (54%)
 Frame = +1

Query: 19  VSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAE 198
           V+P  + L+  L  C     L  G+ +H Y  + GF+ D+ VQN +I  YAK G L  A 
Sbjct: 306 VTPVAIGLI--LMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAF 363

Query: 199 KVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACAHA 378
           + F+E+  +D+ S+NS+I+   +N     + +LF ++ +    +P+  T + VL+AC+H 
Sbjct: 364 RQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEM-RTSGIRPDITTLLGVLTACSHL 422

Query: 379 GLVEQG 396
             +  G
Sbjct: 423 AALGHG 428



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
 Frame = +1

Query: 7   RRDNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRL 186
           R D +SP+  T++    A      L  G+ +HGY TR GF  D+ V+  ++D+YAKS  +
Sbjct: 197 RIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCI 256

Query: 187 DSAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDL---EKLEATKPNAITFVSV 357
             A +VF+   +++  +W+++I  +  N     A ++F  +   + +    P AI    +
Sbjct: 257 IYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGL--I 314

Query: 358 LSACAHAGLVEQG 396
           L  CA  G +  G
Sbjct: 315 LMGCARFGDLSGG 327


>ref|XP_004485618.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Cicer arietinum]
          Length = 621

 Score =  128 bits (321), Expect = 9e-28
 Identities = 64/137 (46%), Positives = 96/137 (70%)
 Frame = +1

Query: 1   KIRRDNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSG 180
           K+R +   P++VTLL  + AC +L+ L HG  +H Y+ + G    IFV NALI+MYAK G
Sbjct: 363 KMRTEETEPNYVTLLAVISACTNLSSLKHGSGVHCYILKFGLDFSIFVCNALINMYAKCG 422

Query: 181 RLDSAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVL 360
            LD + K+F E   RD  +W+S+ISA+G++G G  AL+LF ++++   T P+A+TF++VL
Sbjct: 423 CLDDSLKIFLETPNRDSVTWSSLISAYGLHGCGEQALQLFYEMKERGVT-PDAVTFLAVL 481

Query: 361 SACAHAGLVEQGLEIFN 411
           SAC HAGLV +G ++F+
Sbjct: 482 SACNHAGLVTEGKQVFD 498



 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
 Frame = +1

Query: 13  DNVSPDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGR-LD 189
           + V P+ VTL+  L AC       +G+ IHGY  R GF       +ALI++Y + G  L 
Sbjct: 265 EGVKPNRVTLIALLAACERPGFAKYGKEIHGYGFRHGFNSCHSFSSALINVYCQCGESLH 324

Query: 190 SAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSAC 369
            AE +F     RD+  W+SII ++   G    ALKLF  + + E T+PN +T ++V+SAC
Sbjct: 325 FAELIFERSSLRDVVLWSSIIGSYSRRGESVKALKLFNKM-RTEETEPNYVTLLAVISAC 383

Query: 370 AHAGLVEQG 396
            +   ++ G
Sbjct: 384 TNLSSLKHG 392



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
 Frame = +1

Query: 88  GQVIHGYLTRTGFLG---DIFVQNALIDMYAKSGRLDSAEKVFNEMHERDIGSWNSIISA 258
           G+ IHG +   G +     +F+  A +D Y + G    A  VF+ M  R+  SW + IS 
Sbjct: 186 GRQIHGLVVVDGRIQIQHSVFLSTAFVDFYFRCGESLMALSVFDGMEVRNEVSWTAAISG 245

Query: 259 FGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACAHAGLVEQGLEI 405
              N +   A + F +++ +E  KPN +T +++L+AC   G  + G EI
Sbjct: 246 CTANQDYDVAFECFREMQ-VEGVKPNRVTLIALLAACERPGFAKYGKEI 293



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/106 (34%), Positives = 53/106 (50%)
 Frame = +1

Query: 52  LEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAEKVFNEMHERDI 231
           ++AC        GQ +H     TGF  D  V N++I MYA+   + SA +VF+ M  RD 
Sbjct: 71  IKACSYTHSHAFGQQLHCLALITGFHSDPLVSNSIISMYARFSDIRSARQVFDTMPHRDS 130

Query: 232 GSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSAC 369
            +WNS+I+A+  NG    A +   DL  L    P      S++S C
Sbjct: 131 ITWNSMINAYLQNGCFLEAYQTLKDLYFL-GFLPKPELLASMVSMC 175


>gb|EMJ18188.1| hypothetical protein PRUPE_ppa002640mg [Prunus persica]
          Length = 649

 Score =  128 bits (321), Expect = 9e-28
 Identities = 64/128 (50%), Positives = 88/128 (68%)
 Frame = +1

Query: 25  PDFVTLLTSLEACVDLALLIHGQVIHGYLTRTGFLGDIFVQNALIDMYAKSGRLDSAEKV 204
           PD  T    L AC +LA L  G+ +H  + + G++ D+FV NALI MYAK GR+ +AE V
Sbjct: 375 PDESTFACGLSACANLAALQVGKQLHHLVVKGGYVNDLFVCNALITMYAKCGRVTNAELV 434

Query: 205 FNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLEKLEATKPNAITFVSVLSACAHAGL 384
           F +++  DI SWNS+IS + +NGNG  A++LF  +  +E   P+ +TFV VLSAC+H+GL
Sbjct: 435 FEDINHGDIVSWNSLISGYALNGNGGEAVELFKQM-LIEGVNPDQVTFVGVLSACSHSGL 493

Query: 385 VEQGLEIF 408
           VE GLEIF
Sbjct: 494 VEWGLEIF 501



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 37/91 (40%), Positives = 53/91 (58%)
 Frame = +1

Query: 133 DIFVQNALIDMYAKSGRLDSAEKVFNEMHERDIGSWNSIISAFGINGNGTSALKLFTDLE 312
           DI   N +I  YA+ G++D A K+F EM ER I SWNS+I+ F  NG    ALK    + 
Sbjct: 310 DIVSWNTMITGYAQVGQMDKALKIFEEMGERSIVSWNSLITGFVQNGLYLDALKSIVMMG 369

Query: 313 KLEATKPNAITFVSVLSACAHAGLVEQGLEI 405
           + E  +P+  TF   LSACA+   ++ G ++
Sbjct: 370 Q-EGKRPDESTFACGLSACANLAALQVGKQL 399