BLASTX nr result

ID: Rehmannia24_contig00028913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00028913
         (386 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA36225.1| transposase [Ipomoea purpurea]                         59   5e-07
ref|XP_003593126.1| Zinc finger MYM-type protein [Medicago trunc...    55   7e-06

>dbj|BAA36225.1| transposase [Ipomoea purpurea]
          Length = 808

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 34/90 (37%), Positives = 49/90 (54%)
 Frame = +2

Query: 116 KNKKIDSYFGKQCSKEDVSSIHESSEIDANNDVSGVLNHLEDQNSIPRPSPTKLPKIDEN 295
           K +KID +F ++ S++  S ++  + I             E  NS  RP   +  +I+E 
Sbjct: 3   KTQKIDLFFKRKNSEDSTSQVNPFASI-------------EPLNSESRPEKAQRVEINEK 49

Query: 296 SNGLHIERDPGLRTSIWNYPIEKRDEIRRA 385
            +   +ERDPGLR  IW  PIEKRDE+RRA
Sbjct: 50  FDIQALERDPGLRLPIWKCPIEKRDEVRRA 79


>ref|XP_003593126.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355482174|gb|AES63377.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 754

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
 Frame = +2

Query: 113 MKNKKIDSYFGK--QCSKEDVSSIHESSEIDANNDVSGVLNHLEDQNSIPRPSPTKLPK- 283
           +++KK+++++ +     +ED + I  +S ++ N   SG      DQ   P   P K+ + 
Sbjct: 27  VRHKKLEAFYKRILHVPEEDANCIASTSNLEQNP--SG------DQTVQPDEQPCKIQRV 78

Query: 284 IDENSNGLHIERDPGLRTSIWNYPIEKRDEIRRA 385
           I EN +   +ERDPG R  IW YP+ +RDE+RRA
Sbjct: 79  IVENFDVNRLERDPGKRLQIWEYPVNQRDEVRRA 112


Top