BLASTX nr result
ID: Rehmannia24_contig00028695
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00028695
(382 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_006576518.1| replication protein 1a [Amazon lily mild mot... 256 2e-66
gb|AHJ89005.1| putative replicase [Cassava Ivorian bacilliform v... 236 3e-60
gb|AFU72534.1| 1a protein [Pelargonium zonate spot virus] 172 3e-41
ref|YP_003208107.1| 1a protein [Melandrium yellow fleck virus] g... 143 2e-32
ref|NP_689392.1| 1a protein [Spring beauty latent virus] gi|2253... 142 5e-32
ref|YP_233101.2| 1a protein [Cassia yellow blotch virus] gi|5131... 141 1e-31
ref|NP_613278.1| 1a protein [Cowpea chlorotic mottle virus] gi|1... 140 2e-31
gb|AEI54612.1| 1a protein [Cowpea chlorotic mottle virus] 140 2e-31
gb|AEI54608.1| 1a protein [Cowpea chlorotic mottle virus] 140 2e-31
gb|AAN37631.1| 1a protein [Cowpea chlorotic mottle virus] 140 2e-31
gb|AAN37635.1| 1a protein [Cowpea chlorotic mottle virus] 140 2e-31
ref|NP_041196.1| replicase [Brome mosaic virus] gi|137251|sp|P03... 135 6e-30
emb|CAA41361.1| 1a protein [Brome mosaic virus] 135 6e-30
gb|ADW09019.1| replication protein 1a [Brome mosaic virus] 135 6e-30
gb|ABF83485.1| 1a [Brome mosaic virus] 135 6e-30
dbj|BAJ41520.1| 1a protein [Brome mosaic virus] 135 7e-30
ref|NP_659000.1| 1a protein [Broad bean mottle virus] gi|401312|... 134 1e-29
gb|AER35120.1| putative RNA helicase and methyltransferase [Cucu... 128 7e-28
gb|ABV72581.2| 1a protein [Cucumber mosaic virus] 128 9e-28
ref|NP_619770.1| replicase [Pelargonium zonate spot virus] gi|82... 127 1e-27
>ref|YP_006576518.1| replication protein 1a [Amazon lily mild mottle virus]
gi|398650492|dbj|BAM34543.1| replication protein 1a
[Amazon lily mild mottle virus]
Length = 945
Score = 256 bits (655), Expect = 2e-66
Identities = 121/127 (95%), Positives = 123/127 (96%)
Frame = -1
Query: 382 RTKIRHCIWFPRTRDYLHINVVDNSKVSHRLAWRKVKVKLDTVREVEEIAFRCFKDQKPW 203
RTKIRHCIWFPRTRDYLHINVVD SKV+HRLAWRKVKVKLDTVREVEEIAFRCFK+ KPW
Sbjct: 294 RTKIRHCIWFPRTRDYLHINVVDKSKVAHRLAWRKVKVKLDTVREVEEIAFRCFKENKPW 353
Query: 202 EENLRLIASTLSAKSSTIIVNGMSMMAGERLDPTDYHYVAFSLLLNCKRKFEELQCVYKK 23
EENLRLIASTLSAKSSTIIVNGMSMMAGERLDP DYHYVAFSLLLNCKRKFEELQ VYKK
Sbjct: 354 EENLRLIASTLSAKSSTIIVNGMSMMAGERLDPLDYHYVAFSLLLNCKRKFEELQAVYKK 413
Query: 22 IVWQGWW 2
IVWQGWW
Sbjct: 414 IVWQGWW 420
>gb|AHJ89005.1| putative replicase [Cassava Ivorian bacilliform virus]
Length = 943
Score = 236 bits (601), Expect = 3e-60
Identities = 113/127 (88%), Positives = 120/127 (94%)
Frame = -1
Query: 382 RTKIRHCIWFPRTRDYLHINVVDNSKVSHRLAWRKVKVKLDTVREVEEIAFRCFKDQKPW 203
R++IRHC+WFPRTRDYLHINVVD + S+RLAWRKVKVK+DTVREVEEIAFRCFK+ KPW
Sbjct: 294 RSRIRHCVWFPRTRDYLHINVVDTT--SNRLAWRKVKVKIDTVREVEEIAFRCFKEAKPW 351
Query: 202 EENLRLIASTLSAKSSTIIVNGMSMMAGERLDPTDYHYVAFSLLLNCKRKFEELQCVYKK 23
EENLRLIASTLSAKSSTIIVNGMSMMAGERLD DYHYVAFSLLLNCKRKFEELQCVYKK
Sbjct: 352 EENLRLIASTLSAKSSTIIVNGMSMMAGERLDVLDYHYVAFSLLLNCKRKFEELQCVYKK 411
Query: 22 IVWQGWW 2
IVWQG W
Sbjct: 412 IVWQGRW 418
>gb|AFU72534.1| 1a protein [Pelargonium zonate spot virus]
Length = 962
Score = 172 bits (437), Expect = 3e-41
Identities = 79/126 (62%), Positives = 100/126 (79%)
Frame = -1
Query: 382 RTKIRHCIWFPRTRDYLHINVVDNSKVSHRLAWRKVKVKLDTVREVEEIAFRCFKDQKPW 203
RT++RHC+WFP+ RDY++INV++ + W KV+VKLDTVREVEEI FRCFKD KPW
Sbjct: 308 RTRLRHCVWFPKVRDYVNINVMNPNDPR---IWSKVRVKLDTVREVEEICFRCFKDSKPW 364
Query: 202 EENLRLIASTLSAKSSTIIVNGMSMMAGERLDPTDYHYVAFSLLLNCKRKFEELQCVYKK 23
EENL+L+ S LS+KSSTIIVNGM+MMAGERLD DYH+VAFSL+L+ +RKF+
Sbjct: 365 EENLKLVGSCLSSKSSTIIVNGMTMMAGERLDVLDYHHVAFSLMLSARRKFDMFGKAMNS 424
Query: 22 IVWQGW 5
+ W+GW
Sbjct: 425 LEWKGW 430
>ref|YP_003208107.1| 1a protein [Melandrium yellow fleck virus]
gi|259651322|dbj|BAI40161.1| 1a protein [Melandrium
yellow fleck virus]
Length = 948
Score = 143 bits (361), Expect = 2e-32
Identities = 63/124 (50%), Positives = 91/124 (73%)
Frame = -1
Query: 373 IRHCIWFPRTRDYLHINVVDNSKVSHRLAWRKVKVKLDTVREVEEIAFRCFKDQKPWEEN 194
+RHC+WF Y+ +NV D+ ++ W+ V+V + TVREVEEIAFRCFK+ K W EN
Sbjct: 295 LRHCVWFENISQYVSVNVPDDWSFAN---WKLVRVAISTVREVEEIAFRCFKENKDWAEN 351
Query: 193 LRLIASTLSAKSSTIIVNGMSMMAGERLDPTDYHYVAFSLLLNCKRKFEELQCVYKKIVW 14
++ +AS LSAKSST+I+NG ++MAGER+D DYH VAFSL +N +K+E L+ + ++ W
Sbjct: 352 MKAVASVLSAKSSTVIINGQAIMAGERIDILDYHLVAFSLTMNLYQKYERLRDYHDELEW 411
Query: 13 QGWW 2
+GW+
Sbjct: 412 KGWF 415
>ref|NP_689392.1| 1a protein [Spring beauty latent virus] gi|22531640|dbj|BAC10645.1|
1a protein [Spring beauty latent virus]
Length = 958
Score = 142 bits (358), Expect = 5e-32
Identities = 63/124 (50%), Positives = 88/124 (70%)
Frame = -1
Query: 376 KIRHCIWFPRTRDYLHINVVDNSKVSHRLAWRKVKVKLDTVREVEEIAFRCFKDQKPWEE 197
K+RHCIWF Y+ +N+ D ++ W+ +V TVREVEEIAFRCFK+ K W E
Sbjct: 298 KLRHCIWFENISQYVAVNIPDGWSLTK---WKNARVARSTVREVEEIAFRCFKENKDWTE 354
Query: 196 NLRLIASTLSAKSSTIIVNGMSMMAGERLDPTDYHYVAFSLLLNCKRKFEELQCVYKKIV 17
N+R +AS LSAKSST+I+NG ++MAGERLD DYH VAF+L +N +K+E ++ ++ +
Sbjct: 355 NMRSVASILSAKSSTVIINGQAIMAGERLDLEDYHLVAFALTMNLYQKYERIRAIHDGMQ 414
Query: 16 WQGW 5
W+GW
Sbjct: 415 WKGW 418
>ref|YP_233101.2| 1a protein [Cassia yellow blotch virus]
gi|513125395|dbj|BAD98316.2| 1a protein [Cassia yellow
blotch virus]
Length = 955
Score = 141 bits (355), Expect = 1e-31
Identities = 63/124 (50%), Positives = 87/124 (70%)
Frame = -1
Query: 373 IRHCIWFPRTRDYLHINVVDNSKVSHRLAWRKVKVKLDTVREVEEIAFRCFKDQKPWEEN 194
+RHC+WF Y+ +NV + + WR+V+V + TVREVEEI+FRCFK+ K W EN
Sbjct: 295 LRHCVWFENLSQYVAVNVPVDFNLCR---WRRVRVAVSTVREVEEISFRCFKENKEWTEN 351
Query: 193 LRLIASTLSAKSSTIIVNGMSMMAGERLDPTDYHYVAFSLLLNCKRKFEELQCVYKKIVW 14
++ +AS LSAKSST+I+NG ++MAGERL DYH VAF+L LN K+E L+ ++ + W
Sbjct: 352 MKAVASVLSAKSSTVIINGQAIMAGERLSIDDYHLVAFALTLNLYMKYENLRSFHEGLKW 411
Query: 13 QGWW 2
GWW
Sbjct: 412 GGWW 415
>ref|NP_613278.1| 1a protein [Cowpea chlorotic mottle virus]
gi|137252|sp|P27752.1|ORF1A_CCMV RecName:
Full=Replication protein 1a; Includes: RecName:
Full=ATP-dependent helicase; Includes: RecName:
Full=Methyltransferase gi|331599|gb|AAA46369.1| 1a
protein [Cowpea chlorotic mottle virus]
Length = 958
Score = 140 bits (352), Expect = 2e-31
Identities = 61/123 (49%), Positives = 90/123 (73%)
Frame = -1
Query: 373 IRHCIWFPRTRDYLHINVVDNSKVSHRLAWRKVKVKLDTVREVEEIAFRCFKDQKPWEEN 194
+RHC+WF Y+ +N+ ++ ++H W+ V+V TVREVEEIAFRCFK+ K W EN
Sbjct: 300 LRHCVWFENISQYVAVNIPEDWNLTH---WKPVRVAKTTVREVEEIAFRCFKENKEWTEN 356
Query: 193 LRLIASTLSAKSSTIIVNGMSMMAGERLDPTDYHYVAFSLLLNCKRKFEELQCVYKKIVW 14
++ IAS LSAKSST+I+NG ++MAGERL+ +YH VAF+L +N +K+E ++ Y ++ W
Sbjct: 357 MKAIASILSAKSSTVIINGQAIMAGERLNIDEYHLVAFALTMNLYQKYENIRNFYSEMEW 416
Query: 13 QGW 5
+GW
Sbjct: 417 KGW 419
>gb|AEI54612.1| 1a protein [Cowpea chlorotic mottle virus]
Length = 959
Score = 140 bits (352), Expect = 2e-31
Identities = 61/123 (49%), Positives = 90/123 (73%)
Frame = -1
Query: 373 IRHCIWFPRTRDYLHINVVDNSKVSHRLAWRKVKVKLDTVREVEEIAFRCFKDQKPWEEN 194
+RHC+WF Y+ +N+ ++ ++H W+ V+V TVREVEEIAFRCFK+ K W EN
Sbjct: 300 LRHCVWFENISQYVAVNIPEDWNLTH---WKPVRVAKTTVREVEEIAFRCFKENKEWTEN 356
Query: 193 LRLIASTLSAKSSTIIVNGMSMMAGERLDPTDYHYVAFSLLLNCKRKFEELQCVYKKIVW 14
++ IAS LSAKSST+I+NG ++MAGERL+ +YH VAF+L +N +K+E ++ Y ++ W
Sbjct: 357 MKAIASILSAKSSTVIINGQAIMAGERLNIDEYHLVAFALTMNLYQKYENIRNFYSEMEW 416
Query: 13 QGW 5
+GW
Sbjct: 417 KGW 419
>gb|AEI54608.1| 1a protein [Cowpea chlorotic mottle virus]
Length = 959
Score = 140 bits (352), Expect = 2e-31
Identities = 61/123 (49%), Positives = 90/123 (73%)
Frame = -1
Query: 373 IRHCIWFPRTRDYLHINVVDNSKVSHRLAWRKVKVKLDTVREVEEIAFRCFKDQKPWEEN 194
+RHC+WF Y+ +N+ ++ ++H W+ V+V TVREVEEIAFRCFK+ K W EN
Sbjct: 300 LRHCVWFENISQYVAVNIPEDWNLTH---WKPVRVAKTTVREVEEIAFRCFKENKEWTEN 356
Query: 193 LRLIASTLSAKSSTIIVNGMSMMAGERLDPTDYHYVAFSLLLNCKRKFEELQCVYKKIVW 14
++ IAS LSAKSST+I+NG ++MAGERL+ +YH VAF+L +N +K+E ++ Y ++ W
Sbjct: 357 MKAIASILSAKSSTVIINGQAIMAGERLNIDEYHLVAFALTMNLYQKYENIRNFYSEMEW 416
Query: 13 QGW 5
+GW
Sbjct: 417 KGW 419
>gb|AAN37631.1| 1a protein [Cowpea chlorotic mottle virus]
Length = 959
Score = 140 bits (352), Expect = 2e-31
Identities = 61/123 (49%), Positives = 90/123 (73%)
Frame = -1
Query: 373 IRHCIWFPRTRDYLHINVVDNSKVSHRLAWRKVKVKLDTVREVEEIAFRCFKDQKPWEEN 194
+RHC+WF Y+ +N+ ++ ++H W+ V+V TVREVEEIAFRCFK+ K W EN
Sbjct: 300 LRHCVWFENISQYVAVNIPEDWNLTH---WKPVRVAKTTVREVEEIAFRCFKENKEWTEN 356
Query: 193 LRLIASTLSAKSSTIIVNGMSMMAGERLDPTDYHYVAFSLLLNCKRKFEELQCVYKKIVW 14
++ IAS LSAKSST+I+NG ++MAGERL+ +YH VAF+L +N +K+E ++ Y ++ W
Sbjct: 357 MKAIASILSAKSSTVIINGQAIMAGERLNIDEYHLVAFALTMNLYQKYENIRNFYSEMEW 416
Query: 13 QGW 5
+GW
Sbjct: 417 KGW 419
>gb|AAN37635.1| 1a protein [Cowpea chlorotic mottle virus]
Length = 959
Score = 140 bits (352), Expect = 2e-31
Identities = 61/123 (49%), Positives = 90/123 (73%)
Frame = -1
Query: 373 IRHCIWFPRTRDYLHINVVDNSKVSHRLAWRKVKVKLDTVREVEEIAFRCFKDQKPWEEN 194
+RHC+WF Y+ +N+ ++ ++H W+ V+V TVREVEEIAFRCFK+ K W EN
Sbjct: 300 LRHCVWFENISQYVAVNIPEDWNLTH---WKPVRVAKTTVREVEEIAFRCFKENKEWTEN 356
Query: 193 LRLIASTLSAKSSTIIVNGMSMMAGERLDPTDYHYVAFSLLLNCKRKFEELQCVYKKIVW 14
++ IAS LSAKSST+I+NG ++MAGERL+ +YH VAF+L +N +K+E ++ Y ++ W
Sbjct: 357 MKAIASILSAKSSTVIINGQAIMAGERLNIDEYHLVAFALTMNLYQKYENIRNFYSEMEW 416
Query: 13 QGW 5
+GW
Sbjct: 417 KGW 419
>ref|NP_041196.1| replicase [Brome mosaic virus] gi|137251|sp|P03588.1|ORF1A_BMV
RecName: Full=Replication protein 1a; Includes: RecName:
Full=ATP-dependent helicase; Includes: RecName:
Full=Methyltransferase gi|58729|emb|CAA26228.1| unnamed
protein product [Brome mosaic virus]
Length = 961
Score = 135 bits (340), Expect = 6e-30
Identities = 62/126 (49%), Positives = 89/126 (70%)
Frame = -1
Query: 382 RTKIRHCIWFPRTRDYLHINVVDNSKVSHRLAWRKVKVKLDTVREVEEIAFRCFKDQKPW 203
R +RHC+WF Y+ +++ ++ ++ W+ V+V TVREVEEIAFRCFK+ K W
Sbjct: 297 RETLRHCVWFEDISKYVGVSIPEDWSLNR---WKCVRVAKTTVREVEEIAFRCFKESKEW 353
Query: 202 EENLRLIASTLSAKSSTIIVNGMSMMAGERLDPTDYHYVAFSLLLNCKRKFEELQCVYKK 23
EN++ +AS LSAKSST+I+NG ++MAGERLD DYH VAF+L LN +K+E+L +
Sbjct: 354 TENMKAVASILSAKSSTVIINGQAIMAGERLDIEDYHLVAFALTLNLYQKYEKLTALRDG 413
Query: 22 IVWQGW 5
+ W+GW
Sbjct: 414 MEWKGW 419
>emb|CAA41361.1| 1a protein [Brome mosaic virus]
Length = 961
Score = 135 bits (340), Expect = 6e-30
Identities = 62/126 (49%), Positives = 89/126 (70%)
Frame = -1
Query: 382 RTKIRHCIWFPRTRDYLHINVVDNSKVSHRLAWRKVKVKLDTVREVEEIAFRCFKDQKPW 203
R +RHC+WF Y+ +++ ++ ++ W+ V+V TVREVEEIAFRCFK+ K W
Sbjct: 297 RETLRHCVWFEDISKYVGVSIPEDWSLNR---WKCVRVAKTTVREVEEIAFRCFKENKEW 353
Query: 202 EENLRLIASTLSAKSSTIIVNGMSMMAGERLDPTDYHYVAFSLLLNCKRKFEELQCVYKK 23
EN++ +AS LSAKSST+I+NG ++MAGERLD DYH VAF+L LN +K+E+L +
Sbjct: 354 TENMKAVASILSAKSSTVIINGQAIMAGERLDIEDYHLVAFALTLNLYQKYEKLTALRDG 413
Query: 22 IVWQGW 5
+ W+GW
Sbjct: 414 MEWKGW 419
>gb|ADW09019.1| replication protein 1a [Brome mosaic virus]
Length = 961
Score = 135 bits (340), Expect = 6e-30
Identities = 62/126 (49%), Positives = 89/126 (70%)
Frame = -1
Query: 382 RTKIRHCIWFPRTRDYLHINVVDNSKVSHRLAWRKVKVKLDTVREVEEIAFRCFKDQKPW 203
R +RHC+WF Y+ +++ ++ ++ W+ V+V TVREVEEIAFRCFK+ K W
Sbjct: 297 RETLRHCVWFEDISKYVGVSIPEDWSLNR---WKCVRVAKTTVREVEEIAFRCFKENKEW 353
Query: 202 EENLRLIASTLSAKSSTIIVNGMSMMAGERLDPTDYHYVAFSLLLNCKRKFEELQCVYKK 23
EN++ +AS LSAKSST+I+NG ++MAGERLD DYH VAF+L LN +K+E+L +
Sbjct: 354 TENMKAVASILSAKSSTVIINGQAIMAGERLDIEDYHLVAFALTLNLYQKYEKLTALRDG 413
Query: 22 IVWQGW 5
+ W+GW
Sbjct: 414 MEWKGW 419
>gb|ABF83485.1| 1a [Brome mosaic virus]
Length = 961
Score = 135 bits (340), Expect = 6e-30
Identities = 62/126 (49%), Positives = 89/126 (70%)
Frame = -1
Query: 382 RTKIRHCIWFPRTRDYLHINVVDNSKVSHRLAWRKVKVKLDTVREVEEIAFRCFKDQKPW 203
R +RHC+WF Y+ +++ ++ ++ W+ V+V TVREVEEIAFRCFK+ K W
Sbjct: 297 RETLRHCVWFEDISKYVGVSIPEDWSLNR---WKCVRVAKTTVREVEEIAFRCFKENKEW 353
Query: 202 EENLRLIASTLSAKSSTIIVNGMSMMAGERLDPTDYHYVAFSLLLNCKRKFEELQCVYKK 23
EN++ +AS LSAKSST+I+NG ++MAGERLD DYH VAF+L LN +K+E+L +
Sbjct: 354 TENMKAVASILSAKSSTVIINGQAIMAGERLDIEDYHLVAFALTLNLYQKYEKLTALRDG 413
Query: 22 IVWQGW 5
+ W+GW
Sbjct: 414 MEWKGW 419
>dbj|BAJ41520.1| 1a protein [Brome mosaic virus]
Length = 961
Score = 135 bits (339), Expect = 7e-30
Identities = 62/126 (49%), Positives = 89/126 (70%)
Frame = -1
Query: 382 RTKIRHCIWFPRTRDYLHINVVDNSKVSHRLAWRKVKVKLDTVREVEEIAFRCFKDQKPW 203
R +RHC+WF Y+ +++ ++ ++ W+ V+V TVREVEEIAFRCFK+ K W
Sbjct: 297 RETLRHCVWFEDISKYVGVSIPEDWSLNR---WKCVRVAKTTVREVEEIAFRCFKENKEW 353
Query: 202 EENLRLIASTLSAKSSTIIVNGMSMMAGERLDPTDYHYVAFSLLLNCKRKFEELQCVYKK 23
EN++ +AS LSAKSST+I+NG ++MAGERLD DYH VAF+L LN +K+E+L +
Sbjct: 354 TENMKAVASILSAKSSTVIINGQAIMAGERLDIEDYHLVAFALTLNLYQKYEKLTVLRDG 413
Query: 22 IVWQGW 5
+ W+GW
Sbjct: 414 MEWKGW 419
>ref|NP_659000.1| 1a protein [Broad bean mottle virus]
gi|401312|sp|Q00020.1|ORF1A_BBMV RecName:
Full=Replication protein 1a; Includes: RecName:
Full=ATP-dependent helicase; Includes: RecName:
Full=Methyltransferase gi|210663|gb|AAA42740.1| 1a
protein [Broad bean mottle virus]
Length = 966
Score = 134 bits (338), Expect = 1e-29
Identities = 63/123 (51%), Positives = 86/123 (69%)
Frame = -1
Query: 373 IRHCIWFPRTRDYLHINVVDNSKVSHRLAWRKVKVKLDTVREVEEIAFRCFKDQKPWEEN 194
+RHCIWF YL + + ++ W+ V+V TVREVEEI+FRCFK+ K W EN
Sbjct: 301 LRHCIWFENISQYLAVQIPIGYNLND---WKTVRVARATVREVEEISFRCFKENKDWTEN 357
Query: 193 LRLIASTLSAKSSTIIVNGMSMMAGERLDPTDYHYVAFSLLLNCKRKFEELQCVYKKIVW 14
+R +AS LSAKSST+I+NG S+M+GERLD +YH VAFSL LN +K+E+L+ ++ W
Sbjct: 358 MRSVASILSAKSSTVIINGQSIMSGERLDVLEYHLVAFSLTLNLYQKYEKLRNFQGELEW 417
Query: 13 QGW 5
+GW
Sbjct: 418 KGW 420
>gb|AER35120.1| putative RNA helicase and methyltransferase [Cucumber mosaic virus]
Length = 990
Score = 128 bits (322), Expect = 7e-28
Identities = 58/125 (46%), Positives = 86/125 (68%), Gaps = 4/125 (3%)
Frame = -1
Query: 373 IRHCIWFPRTRDYLHINVVDNSKVSHRLAWRKVKVKLDTVREVEEIAFRCFKDQKPWEEN 194
IRHCIWFP +DY+ + + +S + + W+ V++ T+RE EEIA RC+ D+K W E
Sbjct: 327 IRHCIWFPSIKDYVGLKIPASSDL---VKWKTVRILTSTLRETEEIAMRCYNDKKAWMEQ 383
Query: 193 LRLIASTLSAKSSTIIVNGMSMMAGERLDPTDYHYVAFSLLLNCKRKFEELQCVY----K 26
++I LSAKSSTI++NGMSM +GER+D DYHY+ F++LL+ K K+E+L +Y
Sbjct: 384 FKVILGVLSAKSSTIVINGMSMQSGERIDIEDYHYIGFAILLHTKMKYEQLGKMYDMWNA 443
Query: 25 KIVWQ 11
I+W+
Sbjct: 444 SIIWK 448
>gb|ABV72581.2| 1a protein [Cucumber mosaic virus]
Length = 993
Score = 128 bits (321), Expect = 9e-28
Identities = 57/125 (45%), Positives = 86/125 (68%), Gaps = 4/125 (3%)
Frame = -1
Query: 373 IRHCIWFPRTRDYLHINVVDNSKVSHRLAWRKVKVKLDTVREVEEIAFRCFKDQKPWEEN 194
IRHCIWFP +DY+ + + +S + + W+ V++ T+RE EEIA RC+ D+K W E
Sbjct: 330 IRHCIWFPSIKDYVGLKIPASSDL---VKWKTVRILTSTLRETEEIAMRCYNDKKAWMEQ 386
Query: 193 LRLIASTLSAKSSTIIVNGMSMMAGERLDPTDYHYVAFSLLLNCKRKFEELQCVY----K 26
++I LSAKSSTI++NGMSM +GER+D DYHY+ F++LL+ K K+E+L +Y
Sbjct: 387 FKVILGVLSAKSSTIVINGMSMQSGERIDIEDYHYIGFAILLHTKMKYEQLGKMYDMWNA 446
Query: 25 KIVWQ 11
++W+
Sbjct: 447 SVIWK 451
>ref|NP_619770.1| replicase [Pelargonium zonate spot virus]
gi|82004832|sp|Q9DUT3.1|1A_PZSVT RecName:
Full=Replication protein 1a; Includes: RecName:
Full=ATP-dependent helicase; Includes: RecName:
Full=Methyltransferase gi|10185102|emb|CAC08526.1|
unnamed protein product [Pelargonium zonate spot virus]
Length = 962
Score = 127 bits (320), Expect = 1e-27
Identities = 69/130 (53%), Positives = 84/130 (64%), Gaps = 5/130 (3%)
Frame = -1
Query: 379 TKIRHCIWFPRTRDYLHINVVDNSKVSHRLAWRKVKVKLDTVREVEEIAFRCFKDQKP-- 206
T++RHC+WFP+ RDY++IN D W KV+VKLDTVREVEEI FRC KD
Sbjct: 308 TRLRHCVWFPKVRDYVNINPSDPR------IWSKVRVKLDTVREVEEICFRCPKDVSKIE 361
Query: 205 ---WEENLRLIASTLSAKSSTIIVNGMSMMAGERLDPTDYHYVAFSLLLNCKRKFEELQC 35
E I S L SSTIIVNGM+MMAGERLD DYH+VAFSL+L+ +RKF+
Sbjct: 362 VMGGESETCGIMSVLY--SSTIIVNGMTMMAGERLDVLDYHHVAFSLMLSARRKFDMFGK 419
Query: 34 VYKKIVWQGW 5
+ W+GW
Sbjct: 420 AMNSLEWKGW 429