BLASTX nr result

ID: Rehmannia24_contig00028655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00028655
         (406 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006340641.1| PREDICTED: transmembrane protein 53-like [So...    67   3e-09
ref|XP_004232422.1| PREDICTED: transmembrane protein 53-B-like [...    64   2e-08

>ref|XP_006340641.1| PREDICTED: transmembrane protein 53-like [Solanum tuberosum]
          Length = 404

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 48/142 (33%), Positives = 67/142 (47%), Gaps = 8/142 (5%)
 Frame = -3

Query: 404 SARIFYSSNRHFHHSILLKTSRYQVPIPI------TPQLRSP--YRFXXXXXXXXXXXXS 249
           S R+   SNRH+    L     Y+ P+P+      TP L SP   R              
Sbjct: 4   SVRLLTCSNRHYVSPSLFLKLNYK-PLPLSPSSFRTPSLSSPPKNRPRIFLSHRNPSSPL 62

Query: 248 KFLYGKSFNSFPVSGTANFSISGNYLDHVLFGPEDNSFRWNFTSGRSVNDRNNGNFVVDD 69
              +G S N FP S   N  +S +    ++ G +D  F W+F +G   +++ N       
Sbjct: 63  SSPFGFSKNPFP-SQFLNPILSNDRFARIVSGTQDKLFNWHFAAG---SEKGNEIGATPK 118

Query: 68  KGPEIAVVMLGWLGAKPKHLRR 3
           +GP + VVMLGWLG+KPKHLRR
Sbjct: 119 EGPIVTVVMLGWLGSKPKHLRR 140


>ref|XP_004232422.1| PREDICTED: transmembrane protein 53-B-like [Solanum lycopersicum]
          Length = 403

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 48/141 (34%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
 Frame = -3

Query: 404 SARIFYSSNRHF-HHSILLKTSRYQVPIPI----TPQLRSP--YRFXXXXXXXXXXXXSK 246
           S R+   SNRH    S+ LK +    P+      TP L SP   R               
Sbjct: 4   SVRLLTCSNRHHVSPSLFLKLNHKPFPLSPSSFRTPSLSSPPKNRPRIFLSHRNPSSPLS 63

Query: 245 FLYGKSFNSFPVSGTANFSISGNYLDHVLFGPEDNSFRWNFTSGRSVNDRNNGNFVVDDK 66
             +G S N FP S   N  +S +    ++ G +D  F W+F +G   +++ N    +  +
Sbjct: 64  SPFGFSKNPFP-SKFLNPILSSDRFARIVSGTQDKLFDWHFAAG---SEKGNEIGAIPKE 119

Query: 65  GPEIAVVMLGWLGAKPKHLRR 3
           GP + VVMLGWLG+KPKHLRR
Sbjct: 120 GPIVTVVMLGWLGSKPKHLRR 140


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