BLASTX nr result

ID: Rehmannia24_contig00028643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00028643
         (392 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004237249.1| PREDICTED: probable polygalacturonase At1g80...   144   9e-33
ref|XP_003631273.1| PREDICTED: probable polygalacturonase At1g80...   143   2e-32
emb|CBI28554.3| unnamed protein product [Vitis vinifera]              143   2e-32
emb|CAN65318.1| hypothetical protein VITISV_006411 [Vitis vinifera]   143   2e-32
ref|XP_004297385.1| PREDICTED: probable polygalacturonase At1g80...   142   5e-32
ref|XP_006350275.1| PREDICTED: probable polygalacturonase At1g80...   142   6e-32
gb|ADN33827.1| polygalacturonase [Cucumis melo subsp. melo]           141   1e-31
gb|ESW25741.1| hypothetical protein PHAVU_003G061700g [Phaseolus...   139   3e-31
gb|EOY00519.1| F28C11.9, putative [Theobroma cacao]                   139   3e-31
ref|XP_004155358.1| PREDICTED: probable polygalacturonase At1g80...   139   4e-31
ref|XP_004135255.1| PREDICTED: probable polygalacturonase At1g80...   139   4e-31
dbj|BAA88472.1| polygalacturonase [Cucumis sativus]                   139   4e-31
ref|XP_003551209.1| PREDICTED: probable polygalacturonase At1g80...   139   4e-31
ref|XP_006483889.1| PREDICTED: probable polygalacturonase At1g80...   138   9e-31
ref|XP_006483888.1| PREDICTED: probable polygalacturonase At1g80...   138   9e-31
ref|XP_004509760.1| PREDICTED: pentatricopeptide repeat-containi...   138   9e-31
ref|XP_004509759.1| PREDICTED: pentatricopeptide repeat-containi...   138   9e-31
ref|XP_006585946.1| PREDICTED: probable polygalacturonase At1g80...   137   1e-30
ref|XP_002317091.1| hypothetical protein POPTR_0011s16230g [Popu...   137   1e-30
ref|XP_004248040.1| PREDICTED: probable polygalacturonase At1g80...   136   3e-30

>ref|XP_004237249.1| PREDICTED: probable polygalacturonase At1g80170-like [Solanum
           lycopersicum]
          Length = 460

 Score =  144 bits (364), Expect = 9e-33
 Identities = 69/81 (85%), Positives = 73/81 (90%)
 Frame = -1

Query: 245 GYSCSIGSLGKDNSTGIVEKIVLDKAFLRGTTNGLRIKTWQGGSGYVRSVRYQDVRMDDV 66
           G+  SIGSLGKDNS GIV  IVLD AFLRGTTNGLRIKTWQGGSGYVR+VR+Q+VRM DV
Sbjct: 280 GHGISIGSLGKDNSVGIVTGIVLDNAFLRGTTNGLRIKTWQGGSGYVRAVRFQNVRMQDV 339

Query: 65  SNPIIIDQFYCDSPTSCQNQT 3
           SNPIIIDQFYCDSP SCQNQT
Sbjct: 340 SNPIIIDQFYCDSPKSCQNQT 360


>ref|XP_003631273.1| PREDICTED: probable polygalacturonase At1g80170-like [Vitis
           vinifera]
          Length = 462

 Score =  143 bits (361), Expect = 2e-32
 Identities = 65/81 (80%), Positives = 75/81 (92%)
 Frame = -1

Query: 245 GYSCSIGSLGKDNSTGIVEKIVLDKAFLRGTTNGLRIKTWQGGSGYVRSVRYQDVRMDDV 66
           G+  SIGSLGKDNS+GIV K+VLD AFLRGTTNGLRIKTWQGGSG+VR+VRYQ+VRM+DV
Sbjct: 280 GHGISIGSLGKDNSSGIVTKVVLDSAFLRGTTNGLRIKTWQGGSGFVRAVRYQNVRMEDV 339

Query: 65  SNPIIIDQFYCDSPTSCQNQT 3
           +NPI+IDQFYCDSP  C+NQT
Sbjct: 340 ANPILIDQFYCDSPNECKNQT 360


>emb|CBI28554.3| unnamed protein product [Vitis vinifera]
          Length = 1125

 Score =  143 bits (361), Expect = 2e-32
 Identities = 65/81 (80%), Positives = 75/81 (92%)
 Frame = -1

Query: 245  GYSCSIGSLGKDNSTGIVEKIVLDKAFLRGTTNGLRIKTWQGGSGYVRSVRYQDVRMDDV 66
            G+  SIGSLGKDNS+GIV K+VLD AFLRGTTNGLRIKTWQGGSG+VR+VRYQ+VRM+DV
Sbjct: 929  GHGISIGSLGKDNSSGIVTKVVLDSAFLRGTTNGLRIKTWQGGSGFVRAVRYQNVRMEDV 988

Query: 65   SNPIIIDQFYCDSPTSCQNQT 3
            +NPI+IDQFYCDSP  C+NQT
Sbjct: 989  ANPILIDQFYCDSPNECKNQT 1009


>emb|CAN65318.1| hypothetical protein VITISV_006411 [Vitis vinifera]
          Length = 1052

 Score =  143 bits (361), Expect = 2e-32
 Identities = 65/81 (80%), Positives = 75/81 (92%)
 Frame = -1

Query: 245  GYSCSIGSLGKDNSTGIVEKIVLDKAFLRGTTNGLRIKTWQGGSGYVRSVRYQDVRMDDV 66
            G+  SIGSLGKDNS+GIV K+VLD AFLRGTTNGLRIKTWQGGSG+VR+VRYQ+VRM+DV
Sbjct: 870  GHGISIGSLGKDNSSGIVTKVVLDSAFLRGTTNGLRIKTWQGGSGFVRAVRYQNVRMEDV 929

Query: 65   SNPIIIDQFYCDSPTSCQNQT 3
            +NPI+IDQFYCDSP  C+NQT
Sbjct: 930  ANPILIDQFYCDSPNECKNQT 950


>ref|XP_004297385.1| PREDICTED: probable polygalacturonase At1g80170-like [Fragaria
           vesca subsp. vesca]
          Length = 463

 Score =  142 bits (358), Expect = 5e-32
 Identities = 65/81 (80%), Positives = 74/81 (91%)
 Frame = -1

Query: 245 GYSCSIGSLGKDNSTGIVEKIVLDKAFLRGTTNGLRIKTWQGGSGYVRSVRYQDVRMDDV 66
           G+  SIGSLGKDNS+ +V K+VLD AFLRGTTNGLRIKTWQGGSGYVR VR+Q+VRM+DV
Sbjct: 280 GHGVSIGSLGKDNSSAVVTKVVLDTAFLRGTTNGLRIKTWQGGSGYVRGVRFQNVRMEDV 339

Query: 65  SNPIIIDQFYCDSPTSCQNQT 3
           +NPIIIDQFYCDSP +CQNQT
Sbjct: 340 ANPIIIDQFYCDSPKACQNQT 360


>ref|XP_006350275.1| PREDICTED: probable polygalacturonase At1g80170-like [Solanum
           tuberosum]
          Length = 460

 Score =  142 bits (357), Expect = 6e-32
 Identities = 67/81 (82%), Positives = 73/81 (90%)
 Frame = -1

Query: 245 GYSCSIGSLGKDNSTGIVEKIVLDKAFLRGTTNGLRIKTWQGGSGYVRSVRYQDVRMDDV 66
           G+  SIGSLGKDNS GIV  +VLD AFLRGTTNGLRIKTWQGGSGYVR+VR+Q+VRM +V
Sbjct: 280 GHGISIGSLGKDNSIGIVTGVVLDNAFLRGTTNGLRIKTWQGGSGYVRAVRFQNVRMQNV 339

Query: 65  SNPIIIDQFYCDSPTSCQNQT 3
           SNPIIIDQFYCDSP SCQNQT
Sbjct: 340 SNPIIIDQFYCDSPKSCQNQT 360


>gb|ADN33827.1| polygalacturonase [Cucumis melo subsp. melo]
          Length = 610

 Score =  141 bits (355), Expect = 1e-31
 Identities = 65/81 (80%), Positives = 74/81 (91%)
 Frame = -1

Query: 245 GYSCSIGSLGKDNSTGIVEKIVLDKAFLRGTTNGLRIKTWQGGSGYVRSVRYQDVRMDDV 66
           G+  SIGSLGKDNSTGIV K+VLD AFLR TTNG+RIKTWQGGSGYVRSVR+++VRM+DV
Sbjct: 424 GHGISIGSLGKDNSTGIVTKVVLDTAFLRETTNGVRIKTWQGGSGYVRSVRFENVRMEDV 483

Query: 65  SNPIIIDQFYCDSPTSCQNQT 3
            NPIIIDQFYCDSPT+C+ QT
Sbjct: 484 ENPIIIDQFYCDSPTTCETQT 504


>gb|ESW25741.1| hypothetical protein PHAVU_003G061700g [Phaseolus vulgaris]
          Length = 1082

 Score =  139 bits (351), Expect = 3e-31
 Identities = 64/81 (79%), Positives = 74/81 (91%)
 Frame = -1

Query: 245  GYSCSIGSLGKDNSTGIVEKIVLDKAFLRGTTNGLRIKTWQGGSGYVRSVRYQDVRMDDV 66
            G+  SIGSLGKDNSTGIV K++LD A LR TTNGLRIKTWQGGSGYVR VR+Q+VR++++
Sbjct: 907  GHGISIGSLGKDNSTGIVTKVILDTAVLRETTNGLRIKTWQGGSGYVRGVRFQNVRVENI 966

Query: 65   SNPIIIDQFYCDSPTSCQNQT 3
            SNPIIIDQFYCDSP+SCQNQT
Sbjct: 967  SNPIIIDQFYCDSPSSCQNQT 987


>gb|EOY00519.1| F28C11.9, putative [Theobroma cacao]
          Length = 1063

 Score =  139 bits (351), Expect = 3e-31
 Identities = 64/81 (79%), Positives = 74/81 (91%)
 Frame = -1

Query: 245  GYSCSIGSLGKDNSTGIVEKIVLDKAFLRGTTNGLRIKTWQGGSGYVRSVRYQDVRMDDV 66
            G+  SIGSLGKDNS GIV K+VLD AFLR T+NG+RIKTWQGGSGYVR VR+++VRM+DV
Sbjct: 880  GHGVSIGSLGKDNSMGIVTKVVLDTAFLRETSNGVRIKTWQGGSGYVRGVRFENVRMEDV 939

Query: 65   SNPIIIDQFYCDSPTSCQNQT 3
            +NPIIIDQFYCDSPT+CQNQT
Sbjct: 940  ANPIIIDQFYCDSPTTCQNQT 960


>ref|XP_004155358.1| PREDICTED: probable polygalacturonase At1g80170-like [Cucumis
           sativus]
          Length = 610

 Score =  139 bits (350), Expect = 4e-31
 Identities = 63/81 (77%), Positives = 75/81 (92%)
 Frame = -1

Query: 245 GYSCSIGSLGKDNSTGIVEKIVLDKAFLRGTTNGLRIKTWQGGSGYVRSVRYQDVRMDDV 66
           G+  SIGSLGKDNSTGIV K+VLD A+LR TTNG+RIKTWQGGSGYVR+VR+++VRM+DV
Sbjct: 424 GHGISIGSLGKDNSTGIVTKVVLDTAYLRETTNGVRIKTWQGGSGYVRAVRFENVRMEDV 483

Query: 65  SNPIIIDQFYCDSPTSCQNQT 3
            NPIIIDQFYCDSPT+C++QT
Sbjct: 484 ENPIIIDQFYCDSPTTCESQT 504


>ref|XP_004135255.1| PREDICTED: probable polygalacturonase At1g80170-like [Cucumis
           sativus]
          Length = 610

 Score =  139 bits (350), Expect = 4e-31
 Identities = 63/81 (77%), Positives = 75/81 (92%)
 Frame = -1

Query: 245 GYSCSIGSLGKDNSTGIVEKIVLDKAFLRGTTNGLRIKTWQGGSGYVRSVRYQDVRMDDV 66
           G+  SIGSLGKDNSTGIV K+VLD A+LR TTNG+RIKTWQGGSGYVR+VR+++VRM+DV
Sbjct: 424 GHGISIGSLGKDNSTGIVTKVVLDTAYLRETTNGVRIKTWQGGSGYVRAVRFENVRMEDV 483

Query: 65  SNPIIIDQFYCDSPTSCQNQT 3
            NPIIIDQFYCDSPT+C++QT
Sbjct: 484 ENPIIIDQFYCDSPTTCESQT 504


>dbj|BAA88472.1| polygalacturonase [Cucumis sativus]
          Length = 435

 Score =  139 bits (350), Expect = 4e-31
 Identities = 63/81 (77%), Positives = 75/81 (92%)
 Frame = -1

Query: 245 GYSCSIGSLGKDNSTGIVEKIVLDKAFLRGTTNGLRIKTWQGGSGYVRSVRYQDVRMDDV 66
           G+  SIGSLGKDNSTGIV K+VLD A+LR TTNG+RIKTWQGGSGYVR+VR+++VRM+DV
Sbjct: 283 GHGISIGSLGKDNSTGIVTKVVLDTAYLRETTNGVRIKTWQGGSGYVRAVRFENVRMEDV 342

Query: 65  SNPIIIDQFYCDSPTSCQNQT 3
            NPIIIDQFYCDSPT+C++QT
Sbjct: 343 ENPIIIDQFYCDSPTTCESQT 363


>ref|XP_003551209.1| PREDICTED: probable polygalacturonase At1g80170-like [Glycine max]
          Length = 460

 Score =  139 bits (350), Expect = 4e-31
 Identities = 64/81 (79%), Positives = 74/81 (91%)
 Frame = -1

Query: 245 GYSCSIGSLGKDNSTGIVEKIVLDKAFLRGTTNGLRIKTWQGGSGYVRSVRYQDVRMDDV 66
           G+  SIGSLGKDNSTGIV K++LD A LR TTNG+RIKTWQGGSGYVR VR+Q+VR+++V
Sbjct: 284 GHGISIGSLGKDNSTGIVTKVILDTAVLRETTNGVRIKTWQGGSGYVRGVRFQNVRVENV 343

Query: 65  SNPIIIDQFYCDSPTSCQNQT 3
           SNPIIIDQFYCDSPTSC+NQT
Sbjct: 344 SNPIIIDQFYCDSPTSCENQT 364


>ref|XP_006483889.1| PREDICTED: probable polygalacturonase At1g80170-like isoform X2
           [Citrus sinensis] gi|568860776|ref|XP_006483890.1|
           PREDICTED: probable polygalacturonase At1g80170-like
           isoform X3 [Citrus sinensis]
          Length = 432

 Score =  138 bits (347), Expect = 9e-31
 Identities = 64/81 (79%), Positives = 72/81 (88%)
 Frame = -1

Query: 245 GYSCSIGSLGKDNSTGIVEKIVLDKAFLRGTTNGLRIKTWQGGSGYVRSVRYQDVRMDDV 66
           G+  SIGSLGKDNS GIV K+VLD A+LR T NGLRIKTWQGGSGYVR VR+++VRM+DV
Sbjct: 258 GHGISIGSLGKDNSIGIVAKVVLDTAYLRETANGLRIKTWQGGSGYVRGVRFENVRMEDV 317

Query: 65  SNPIIIDQFYCDSPTSCQNQT 3
           SNPIIIDQFYCDSP +CQNQT
Sbjct: 318 SNPIIIDQFYCDSPKTCQNQT 338


>ref|XP_006483888.1| PREDICTED: probable polygalacturonase At1g80170-like isoform X1
           [Citrus sinensis]
          Length = 454

 Score =  138 bits (347), Expect = 9e-31
 Identities = 64/81 (79%), Positives = 72/81 (88%)
 Frame = -1

Query: 245 GYSCSIGSLGKDNSTGIVEKIVLDKAFLRGTTNGLRIKTWQGGSGYVRSVRYQDVRMDDV 66
           G+  SIGSLGKDNS GIV K+VLD A+LR T NGLRIKTWQGGSGYVR VR+++VRM+DV
Sbjct: 280 GHGISIGSLGKDNSIGIVAKVVLDTAYLRETANGLRIKTWQGGSGYVRGVRFENVRMEDV 339

Query: 65  SNPIIIDQFYCDSPTSCQNQT 3
           SNPIIIDQFYCDSP +CQNQT
Sbjct: 340 SNPIIIDQFYCDSPKTCQNQT 360


>ref|XP_004509760.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like isoform X2 [Cicer arietinum]
          Length = 438

 Score =  138 bits (347), Expect = 9e-31
 Identities = 62/81 (76%), Positives = 75/81 (92%)
 Frame = -1

Query: 245 GYSCSIGSLGKDNSTGIVEKIVLDKAFLRGTTNGLRIKTWQGGSGYVRSVRYQDVRMDDV 66
           G+  SIGSLGKDNSTG+V K++LD AFL+ TTNG+RIKTWQGGSGYVR VR+Q+VR+++V
Sbjct: 259 GHGISIGSLGKDNSTGVVTKVILDTAFLKETTNGVRIKTWQGGSGYVRGVRFQNVRVENV 318

Query: 65  SNPIIIDQFYCDSPTSCQNQT 3
           SNPIIIDQFYCDSPTSCQ+Q+
Sbjct: 319 SNPIIIDQFYCDSPTSCQDQS 339


>ref|XP_004509759.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like isoform X1 [Cicer arietinum]
          Length = 610

 Score =  138 bits (347), Expect = 9e-31
 Identities = 62/81 (76%), Positives = 75/81 (92%)
 Frame = -1

Query: 245 GYSCSIGSLGKDNSTGIVEKIVLDKAFLRGTTNGLRIKTWQGGSGYVRSVRYQDVRMDDV 66
           G+  SIGSLGKDNSTG+V K++LD AFL+ TTNG+RIKTWQGGSGYVR VR+Q+VR+++V
Sbjct: 431 GHGISIGSLGKDNSTGVVTKVILDTAFLKETTNGVRIKTWQGGSGYVRGVRFQNVRVENV 490

Query: 65  SNPIIIDQFYCDSPTSCQNQT 3
           SNPIIIDQFYCDSPTSCQ+Q+
Sbjct: 491 SNPIIIDQFYCDSPTSCQDQS 511


>ref|XP_006585946.1| PREDICTED: probable polygalacturonase At1g80170-like [Glycine max]
          Length = 459

 Score =  137 bits (345), Expect = 1e-30
 Identities = 63/80 (78%), Positives = 73/80 (91%)
 Frame = -1

Query: 245 GYSCSIGSLGKDNSTGIVEKIVLDKAFLRGTTNGLRIKTWQGGSGYVRSVRYQDVRMDDV 66
           G+  SIGSLGKDNSTGIV K++LD A LR TTNGLRIKTWQGGSGYVR VR+Q+VR+++V
Sbjct: 283 GHGISIGSLGKDNSTGIVTKVILDTAVLRETTNGLRIKTWQGGSGYVRGVRFQNVRVENV 342

Query: 65  SNPIIIDQFYCDSPTSCQNQ 6
           SNPIIIDQFYCDSPT+C+NQ
Sbjct: 343 SNPIIIDQFYCDSPTNCENQ 362


>ref|XP_002317091.1| hypothetical protein POPTR_0011s16230g [Populus trichocarpa]
           gi|222860156|gb|EEE97703.1| hypothetical protein
           POPTR_0011s16230g [Populus trichocarpa]
          Length = 447

 Score =  137 bits (345), Expect = 1e-30
 Identities = 63/81 (77%), Positives = 72/81 (88%)
 Frame = -1

Query: 245 GYSCSIGSLGKDNSTGIVEKIVLDKAFLRGTTNGLRIKTWQGGSGYVRSVRYQDVRMDDV 66
           G+  SIGSLGKDNSTGIV K+VLD A +R TTNG+RIKTWQGG+GYVR VR+++VRMD+V
Sbjct: 251 GHGVSIGSLGKDNSTGIVTKVVLDTALIRETTNGVRIKTWQGGNGYVRGVRFENVRMDNV 310

Query: 65  SNPIIIDQFYCDSPTSCQNQT 3
            NPIIIDQFYCDSP SCQNQT
Sbjct: 311 DNPIIIDQFYCDSPKSCQNQT 331


>ref|XP_004248040.1| PREDICTED: probable polygalacturonase At1g80170-like [Solanum
           lycopersicum]
          Length = 536

 Score =  136 bits (342), Expect = 3e-30
 Identities = 62/81 (76%), Positives = 73/81 (90%)
 Frame = -1

Query: 245 GYSCSIGSLGKDNSTGIVEKIVLDKAFLRGTTNGLRIKTWQGGSGYVRSVRYQDVRMDDV 66
           G+  SIGSLGKD+S G+V ++VLD AFL+GTTNGLRIKTWQGGSGYVR+VR+Q+V+M+DV
Sbjct: 364 GHGISIGSLGKDDSIGVVNRVVLDTAFLKGTTNGLRIKTWQGGSGYVRTVRFQNVQMEDV 423

Query: 65  SNPIIIDQFYCDSPTSCQNQT 3
           SNPIIIDQFYCDS   CQNQT
Sbjct: 424 SNPIIIDQFYCDSQKPCQNQT 444


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