BLASTX nr result
ID: Rehmannia24_contig00028533
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00028533
(564 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS69572.1| hypothetical protein M569_05194, partial [Genlise... 93 4e-17
ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera] 84 2e-14
ref|XP_006344284.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-14
ref|XP_004237212.1| PREDICTED: pentatricopeptide repeat-containi... 83 4e-14
gb|EOY02035.1| Pentatricopeptide repeat (PPR) superfamily protei... 79 8e-13
gb|EXB63826.1| hypothetical protein L484_021099 [Morus notabilis] 78 2e-12
ref|XP_006483222.1| PREDICTED: pentatricopeptide repeat-containi... 76 5e-12
ref|XP_006438631.1| hypothetical protein CICLE_v10033863mg, part... 76 5e-12
gb|ESW29677.1| hypothetical protein PHAVU_002G089500g [Phaseolus... 75 9e-12
gb|EOY30986.1| Tetratricopeptide repeat (TPR)-like superfamily p... 75 1e-11
gb|ABK28160.1| unknown [Arabidopsis thaliana] 75 1e-11
gb|ABE65422.1| pentatricopeptide repeat-containing protein [Arab... 75 1e-11
ref|NP_178378.1| pentatricopeptide repeat-containing protein [Ar... 75 1e-11
ref|XP_003519768.2| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
ref|XP_006290425.1| hypothetical protein CARUB_v10019221mg [Caps... 74 2e-11
gb|EMJ26028.1| hypothetical protein PRUPE_ppa023452mg [Prunus pe... 74 3e-11
ref|XP_006395761.1| hypothetical protein EUTSA_v10003832mg [Eutr... 72 1e-10
ref|XP_002876827.1| pentatricopeptide repeat-containing protein ... 72 1e-10
ref|XP_003613604.1| Pentatricopeptide repeat-containing protein ... 71 2e-10
>gb|EPS69572.1| hypothetical protein M569_05194, partial [Genlisea aurea]
Length = 565
Score = 93.2 bits (230), Expect = 4e-17
Identities = 43/59 (72%), Positives = 53/59 (89%)
Frame = +1
Query: 7 LGEEMAWRLLELEPENPIPFVVLSNIYAGQERWKDVHKIRKLMDEMGIKKRPGLSSIGV 183
LGEEMA R++ELEPENPIPFV+LSNIYAGQ++WKDV + RK +D+ G+KK+PGLSSI V
Sbjct: 507 LGEEMARRVVELEPENPIPFVILSNIYAGQDKWKDVVETRKALDQKGLKKQPGLSSIVV 565
>ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
[Vitis vinifera] gi|296086418|emb|CBI32007.3| unnamed
protein product [Vitis vinifera]
Length = 617
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/61 (63%), Positives = 50/61 (81%)
Frame = +1
Query: 1 SKLGEEMAWRLLELEPENPIPFVVLSNIYAGQERWKDVHKIRKLMDEMGIKKRPGLSSIG 180
S LGEEMA +L ELEP++P PFV+LSNIYA Q RW DV ++R++M++ G+KK PG SSIG
Sbjct: 556 SALGEEMAKKLSELEPQDPTPFVILSNIYAVQGRWGDVERVREMMNDRGLKKPPGCSSIG 615
Query: 181 V 183
V
Sbjct: 616 V 616
>emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]
Length = 677
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/61 (63%), Positives = 50/61 (81%)
Frame = +1
Query: 1 SKLGEEMAWRLLELEPENPIPFVVLSNIYAGQERWKDVHKIRKLMDEMGIKKRPGLSSIG 180
S LGEEMA +L ELEP++P PFV+LSNIYA Q RW DV ++R++M++ G+KK PG SSIG
Sbjct: 616 SALGEEMAKKLSELEPQDPTPFVILSNIYAVQGRWGDVERVREMMNDRGLKKPPGCSSIG 675
Query: 181 V 183
V
Sbjct: 676 V 676
>ref|XP_006344284.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02750-like [Solanum tuberosum]
Length = 615
Score = 83.6 bits (205), Expect = 3e-14
Identities = 36/61 (59%), Positives = 49/61 (80%)
Frame = +1
Query: 1 SKLGEEMAWRLLELEPENPIPFVVLSNIYAGQERWKDVHKIRKLMDEMGIKKRPGLSSIG 180
+K+GEEM +L ELEPENP+PFV+LSN+YA Q RW D +IR+ +DE G++K PG S++G
Sbjct: 554 AKMGEEMTKKLSELEPENPVPFVILSNLYARQGRWDDAERIRETIDERGLEKLPGYSTVG 613
Query: 181 V 183
V
Sbjct: 614 V 614
>ref|XP_004237212.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02750-like [Solanum lycopersicum]
Length = 615
Score = 83.2 bits (204), Expect = 4e-14
Identities = 36/61 (59%), Positives = 48/61 (78%)
Frame = +1
Query: 1 SKLGEEMAWRLLELEPENPIPFVVLSNIYAGQERWKDVHKIRKLMDEMGIKKRPGLSSIG 180
+K+GEEM +L ELEPENP+PFV+LSN+YA Q RW D +IR+ +DE G+ K PG S++G
Sbjct: 554 AKMGEEMTQKLSELEPENPVPFVILSNLYARQGRWDDAERIRETIDERGLDKLPGYSTVG 613
Query: 181 V 183
V
Sbjct: 614 V 614
>gb|EOY02035.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 618
Score = 79.0 bits (193), Expect = 8e-13
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = +1
Query: 4 KLGEEMAWRLLELEPENPIPFVVLSNIYAGQERWKDVHKIRKLMDEMGIKKRPGLSSIGV 183
+LGEEMA +L ELEPENP PFV+LS+IYA RW D +IR+++D+ G++K PG SSI V
Sbjct: 558 ELGEEMAMKLSELEPENPAPFVILSDIYAAVGRWGDAERIRQVIDDRGLRKFPGFSSIAV 617
>gb|EXB63826.1| hypothetical protein L484_021099 [Morus notabilis]
Length = 619
Score = 77.8 bits (190), Expect = 2e-12
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 1 SKLGEEMAWRLLELEPENPIPFVVLSNIYAGQERWKDVHKIRKLMDEMGIKKRPGLSSIG 180
S+L EEMA +LLELEPE+PIP+VVLSNIYA RWKDV ++R +M+ G +K PG S I
Sbjct: 558 SELAEEMAKKLLELEPESPIPYVVLSNIYAELGRWKDVERVRGMMNHKGHRKAPGYSFIE 617
Query: 181 VA 186
V+
Sbjct: 618 VS 619
>ref|XP_006483222.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02750-like [Citrus sinensis]
Length = 618
Score = 76.3 bits (186), Expect = 5e-12
Identities = 34/58 (58%), Positives = 47/58 (81%)
Frame = +1
Query: 1 SKLGEEMAWRLLELEPENPIPFVVLSNIYAGQERWKDVHKIRKLMDEMGIKKRPGLSS 174
S LGEEMA +L E+EPENP PFV+LSNIYAG RW+DV +IR+++++ + K PG+S+
Sbjct: 558 SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISA 615
>ref|XP_006438631.1| hypothetical protein CICLE_v10033863mg, partial [Citrus clementina]
gi|557540827|gb|ESR51871.1| hypothetical protein
CICLE_v10033863mg, partial [Citrus clementina]
Length = 592
Score = 76.3 bits (186), Expect = 5e-12
Identities = 34/58 (58%), Positives = 47/58 (81%)
Frame = +1
Query: 1 SKLGEEMAWRLLELEPENPIPFVVLSNIYAGQERWKDVHKIRKLMDEMGIKKRPGLSS 174
S LGEEMA +L E+EPENP PFV+LSNIYAG RW+DV +IR+++++ + K PG+S+
Sbjct: 532 SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISA 589
>gb|ESW29677.1| hypothetical protein PHAVU_002G089500g [Phaseolus vulgaris]
Length = 628
Score = 75.5 bits (184), Expect = 9e-12
Identities = 37/64 (57%), Positives = 46/64 (71%)
Frame = +1
Query: 1 SKLGEEMAWRLLELEPENPIPFVVLSNIYAGQERWKDVHKIRKLMDEMGIKKRPGLSSIG 180
S LGEEMA RLL++EPENP P VVLSNIYAG RWK+V ++R ++ + G+ K GLS
Sbjct: 565 SNLGEEMAMRLLDIEPENPTPLVVLSNIYAGLGRWKEVERVRGMITDKGLDKLCGLSMTE 624
Query: 181 VA*K 192
A K
Sbjct: 625 AASK 628
>gb|EOY30986.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 847
Score = 74.7 bits (182), Expect = 1e-11
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +1
Query: 4 KLGEEMAWRLLELEPENPIPFVVLSNIYAGQERWKDVHKIRKLMDEMGIKKRPGLSSIGV 183
+LGE +A RLLELEP+NP +V+LSNIYAG RW DV +IR L++ G+KK PG SSI V
Sbjct: 608 ELGESVAQRLLELEPDNPGAYVLLSNIYAGAGRWDDVARIRTLLNNKGMKKVPGCSSIEV 667
>gb|ABK28160.1| unknown [Arabidopsis thaliana]
Length = 614
Score = 74.7 bits (182), Expect = 1e-11
Identities = 35/58 (60%), Positives = 44/58 (75%)
Frame = +1
Query: 7 LGEEMAWRLLELEPENPIPFVVLSNIYAGQERWKDVHKIRKLMDEMGIKKRPGLSSIG 180
LGEE A +L ELEPENP PFV+LS+IYA ERW+DV IR+++D+ + K PGLS G
Sbjct: 556 LGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSLSG 613
>gb|ABE65422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 74.7 bits (182), Expect = 1e-11
Identities = 35/58 (60%), Positives = 44/58 (75%)
Frame = +1
Query: 7 LGEEMAWRLLELEPENPIPFVVLSNIYAGQERWKDVHKIRKLMDEMGIKKRPGLSSIG 180
LGEE A +L ELEPENP PFV+LS+IYA ERW+DV IR+++D+ + K PGLS G
Sbjct: 556 LGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSLSG 613
>ref|NP_178378.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546778|sp|Q1PFA6.2|PP144_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g02750 gi|2947066|gb|AAC05347.1| hypothetical protein
[Arabidopsis thaliana] gi|330250526|gb|AEC05620.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 613
Score = 74.7 bits (182), Expect = 1e-11
Identities = 35/58 (60%), Positives = 44/58 (75%)
Frame = +1
Query: 7 LGEEMAWRLLELEPENPIPFVVLSNIYAGQERWKDVHKIRKLMDEMGIKKRPGLSSIG 180
LGEE A +L ELEPENP PFV+LS+IYA ERW+DV IR+++D+ + K PGLS G
Sbjct: 556 LGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSLSG 613
>ref|XP_003519768.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g02750-like [Glycine max]
Length = 637
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/62 (58%), Positives = 46/62 (74%)
Frame = +1
Query: 1 SKLGEEMAWRLLELEPENPIPFVVLSNIYAGQERWKDVHKIRKLMDEMGIKKRPGLSSIG 180
S LGEEMA +LL++EPENP P VVLSNIYAG RWK+V +IR ++ + G+ K G S I
Sbjct: 576 SNLGEEMAKKLLDVEPENPAPLVVLSNIYAGLGRWKEVERIRGVITDKGLDKLSGFSMIE 635
Query: 181 VA 186
+A
Sbjct: 636 LA 637
>ref|XP_006290425.1| hypothetical protein CARUB_v10019221mg [Capsella rubella]
gi|482559132|gb|EOA23323.1| hypothetical protein
CARUB_v10019221mg [Capsella rubella]
Length = 611
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/58 (60%), Positives = 44/58 (75%)
Frame = +1
Query: 7 LGEEMAWRLLELEPENPIPFVVLSNIYAGQERWKDVHKIRKLMDEMGIKKRPGLSSIG 180
LGEE A +L ELEPENP PFV+LS+IYA ERW+DV IR+++D+ + K PGLS G
Sbjct: 554 LGEEAAMKLAELEPENPAPFVILSSIYAALERWQDVESIRQVIDQKQLVKFPGLSLSG 611
>gb|EMJ26028.1| hypothetical protein PRUPE_ppa023452mg [Prunus persica]
Length = 619
Score = 73.6 bits (179), Expect = 3e-11
Identities = 34/57 (59%), Positives = 44/57 (77%)
Frame = +1
Query: 1 SKLGEEMAWRLLELEPENPIPFVVLSNIYAGQERWKDVHKIRKLMDEMGIKKRPGLS 171
S+LG+EMA +L ELEPENP PFV+LS IYA RW+D KIR+LM++ ++K PG S
Sbjct: 556 SQLGKEMAIKLSELEPENPTPFVILSKIYAALGRWEDAEKIRELMNDKTLRKLPGFS 612
>ref|XP_006395761.1| hypothetical protein EUTSA_v10003832mg [Eutrema salsugineum]
gi|557092400|gb|ESQ33047.1| hypothetical protein
EUTSA_v10003832mg [Eutrema salsugineum]
Length = 618
Score = 72.0 bits (175), Expect = 1e-10
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +1
Query: 7 LGEEMAWRLLELEPENPIPFVVLSNIYAGQERWKDVHKIRKLMDEMGIKKRPGLSSIG 180
LGEE+A +L ELEPEN PFV+LS+IYA ERW+DV IR ++DE + K PG+S G
Sbjct: 561 LGEEVAMKLAELEPENSAPFVILSSIYAALERWQDVESIRHVIDEKQLVKLPGISLSG 618
>ref|XP_002876827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297322665|gb|EFH53086.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 611
Score = 72.0 bits (175), Expect = 1e-10
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +1
Query: 7 LGEEMAWRLLELEPENPIPFVVLSNIYAGQERWKDVHKIRKLMDEMGIKKRPGLSSIG 180
LGEE A +L ELEP NP PFV+LS+IYA ERW+DV IR+++D+ + K PGLS G
Sbjct: 554 LGEEAAMKLAELEPGNPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSLSG 611
>ref|XP_003613604.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514939|gb|AES96562.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 620
Score = 71.2 bits (173), Expect = 2e-10
Identities = 33/61 (54%), Positives = 44/61 (72%)
Frame = +1
Query: 1 SKLGEEMAWRLLELEPENPIPFVVLSNIYAGQERWKDVHKIRKLMDEMGIKKRPGLSSIG 180
S LGEEMA +L+++EP+NP P VVLSNIYA RW +V +IR L+ + G+ K G+S I
Sbjct: 559 SNLGEEMAMKLIDIEPKNPAPLVVLSNIYAALGRWSEVERIRGLITDKGLDKNSGISMIE 618
Query: 181 V 183
V
Sbjct: 619 V 619