BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00027385
         (470 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854...   159   4e-37
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]   158   6e-37
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   158   6e-37
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...   156   2e-36
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   154   1e-35
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          150   2e-34
emb|CAN69713.1| hypothetical protein VITISV_011261 [Vitis vinifera]   140   2e-31
ref|XP_006465748.1| PREDICTED: uncharacterized protein LOC102628...   137   1e-30
emb|CAN81655.1| hypothetical protein VITISV_042593 [Vitis vinifera]   117   2e-24
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]               111   1e-22
dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica ...   110   2e-22
gb|AAT38766.2| Polyprotein, putative [Solanum demissum]               109   3e-22
gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subc...   107   2e-21
gb|EEC78771.1| hypothetical protein OsI_19003 [Oryza sativa Indi...   107   2e-21
gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subc...   107   2e-21
gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japo...   107   2e-21
gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subc...   106   3e-21
gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subc...   106   3e-21
gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sa...   106   3e-21
gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subc...   106   3e-21

>ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis
           vinifera]
          Length = 478

 Score =  159 bits (402), Expect = 4e-37
 Identities = 86/167 (51%), Positives = 113/167 (67%), Gaps = 13/167 (7%)
 Frame = -3

Query: 462 ESKANLMEHGSSSNSKKRPNDKGKKPAAG---------KFQGACYNCGKPNHMAKDCRQP 310
           E+KAN +EHG SSN+K   N+KGK    G         KFQG C+NCGK  H + DCR P
Sbjct: 238 EAKANFVEHGQSSNAKTN-NNKGKGSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDCRLP 296

Query: 309 KKKKTKPQSNANVVEE--RELTEVDMSAVVFEANLV-DNPKEWFVDTGATCHVCSDKDAF 139
           KK K K    ANV+++  + + ++D++ VV E NLV  NPKEW++DTGAT HVCSDK  F
Sbjct: 297 KKNKPK---EANVIDDITKNVYDIDLTTVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMF 353

Query: 138 SSYIP-STGRKLHMGNHASSDVAGIGTVVLKLTSGKELKLKDVLHVP 1
           S++ P   G K+ MGN A+S++ G G V+LK+TSGKEL L +VL+VP
Sbjct: 354 STFEPIENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVP 400


>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
          Length = 1096

 Score =  158 bits (400), Expect = 6e-37
 Identities = 86/167 (51%), Positives = 113/167 (67%), Gaps = 13/167 (7%)
 Frame = -3

Query: 462 ESKANLMEHGSSSNSKKRPNDKGKKPAAG---------KFQGACYNCGKPNHMAKDCRQP 310
           E+KAN +EHG SS +K   N+KGK    G         KFQG C+NCGK  H + DCR P
Sbjct: 159 EAKANFVEHGQSSKAKTN-NNKGKGSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDCRLP 217

Query: 309 KKKKTKPQSNANVVEE--RELTEVDMSAVVFEANLV-DNPKEWFVDTGATCHVCSDKDAF 139
           KK K K    ANV+++  + + ++D++AVV E NLV  NPKEW++DTGAT HVCSDK  F
Sbjct: 218 KKNKPK---EANVIDDITKNVYDIDLTAVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMF 274

Query: 138 SSYIP-STGRKLHMGNHASSDVAGIGTVVLKLTSGKELKLKDVLHVP 1
           S++ P   G K+ MGN A+S++ G G V+LK+TSGKEL L +VL+VP
Sbjct: 275 STFEPIENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVP 321


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  158 bits (400), Expect = 6e-37
 Identities = 86/167 (51%), Positives = 113/167 (67%), Gaps = 13/167 (7%)
 Frame = -3

Query: 462 ESKANLMEHGSSSNSKKRPNDKGKKPAAG---------KFQGACYNCGKPNHMAKDCRQP 310
           E+KAN +EHG SS +K   N+KGK    G         KFQG C+NCGK  H + DCR P
Sbjct: 238 EAKANFVEHGQSSKAKTN-NNKGKGSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDCRLP 296

Query: 309 KKKKTKPQSNANVVEE--RELTEVDMSAVVFEANLV-DNPKEWFVDTGATCHVCSDKDAF 139
           KK K K    ANV+++  + + ++D++AVV E NLV  NPKEW++DTGAT HVCSDK  F
Sbjct: 297 KKNKPK---EANVIDDITKNVYDIDLTAVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMF 353

Query: 138 SSYIP-STGRKLHMGNHASSDVAGIGTVVLKLTSGKELKLKDVLHVP 1
           S++ P   G K+ MGN A+S++ G G V+LK+TSGKEL L +VL+VP
Sbjct: 354 STFEPIENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVP 400


>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score =  156 bits (395), Expect = 2e-36
 Identities = 85/167 (50%), Positives = 111/167 (66%), Gaps = 13/167 (7%)
 Frame = -3

Query: 462 ESKANLMEHGSSSNSKKRPNDKGKKPAAG---------KFQGACYNCGKPNHMAKDCRQP 310
           E+KAN +EHG SS +K   N+KGK    G         KFQG C+NCGK  H + DCR P
Sbjct: 238 EAKANFVEHGQSSKAKTN-NNKGKGSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDCRLP 296

Query: 309 KKKKTKPQSNANVVEE--RELTEVDMSAVVFEANLV-DNPKEWFVDTGATCHVCSDKDAF 139
           KK K K    ANV++   + ++ +D++AVV E NLV  NPKEW++DTGAT HVCSDK  F
Sbjct: 297 KKNKPK---EANVIDNITKNVSNIDLTAVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMF 353

Query: 138 SSYIP-STGRKLHMGNHASSDVAGIGTVVLKLTSGKELKLKDVLHVP 1
           S++ P   G K+ MGN  +S++ G G V+LK+TSGKEL L +VL+VP
Sbjct: 354 STFEPIENGEKVFMGNSTTSEIKGQGKVILKMTSGKELTLTNVLYVP 400


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  154 bits (389), Expect = 1e-35
 Identities = 83/167 (49%), Positives = 111/167 (66%), Gaps = 13/167 (7%)
 Frame = -3

Query: 462 ESKANLMEHGSSSNSKKRPNDKGKKPAAG---------KFQGACYNCGKPNHMAKDCRQP 310
           E++AN +EHG SS +K   N+KGK    G         KFQG C+NCGK  H + DCR P
Sbjct: 238 EAQANFVEHGQSSKAKTN-NNKGKGSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDCRLP 296

Query: 309 KKKKTKPQSNANVVEE--RELTEVDMSAVVFEANLV-DNPKEWFVDTGATCHVCSDKDAF 139
           KK K K    ANV++   + ++++D++ VV E NLV  NPKEW++DTGAT HVCSDK  F
Sbjct: 297 KKNKPK---EANVIDNITKNVSDIDLTTVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMF 353

Query: 138 SSYIP-STGRKLHMGNHASSDVAGIGTVVLKLTSGKELKLKDVLHVP 1
           S++ P   G K+ MGN  +S++ G G V+LK+TSGKEL L +VL+VP
Sbjct: 354 STFEPIENGEKVFMGNSTTSEIKGQGKVILKMTSGKELTLTNVLYVP 400


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  150 bits (378), Expect = 2e-34
 Identities = 80/157 (50%), Positives = 104/157 (66%), Gaps = 4/157 (2%)
 Frame = -3

Query: 459 SKANLMEHGSSSNSKKRPNDKGKKPAAGKFQGACYNCGKPNHMAKDCRQPKKKKTKPQSN 280
           +KAN +EHG     KK     G      KFQG CYNC K  H A DCR PKKK+      
Sbjct: 238 AKANFVEHGPKKKKKKLGPKGGISKKQTKFQGKCYNCDKMGHKASDCRLPKKKR-----E 292

Query: 279 ANVVEE--RELTEVDMSAVVFEANLV-DNPKEWFVDTGATCHVCSDKDAFSSYIPSTGR- 112
           ANVVE   + ++++++SAVV E N+V  NP+EW++DTGAT HVCSDK  F+S+  ++ R 
Sbjct: 293 ANVVENITQHVSDINLSAVVLEVNMVGSNPREWWIDTGATRHVCSDKGLFTSFEAASNRE 352

Query: 111 KLHMGNHASSDVAGIGTVVLKLTSGKELKLKDVLHVP 1
           KL MGN A+S++ G G V LK+TSGKEL L +VL+VP
Sbjct: 353 KLFMGNSATSEIEGQGKVALKMTSGKELTLNNVLYVP 389


>emb|CAN69713.1| hypothetical protein VITISV_011261 [Vitis vinifera]
          Length = 382

 Score =  140 bits (353), Expect = 2e-31
 Identities = 76/157 (48%), Positives = 98/157 (62%), Gaps = 1/157 (0%)
 Frame = -3

Query: 468 PMESKANLMEHGSSSNSKKRPNDKGK-KPAAGKFQGACYNCGKPNHMAKDCRQPKKKKTK 292
           PMESKANL+E  ++   K       + K    KF G CY C K  H AK CR   + K  
Sbjct: 217 PMESKANLVEPKANKKRKHFGESLSQGKNKYKKFLGKCYICNKQGHRAKXCRLKGQSK-- 274

Query: 291 PQSNANVVEERELTEVDMSAVVFEANLVDNPKEWFVDTGATCHVCSDKDAFSSYIPSTGR 112
            ++ A+V EE EL  +  + V+FE N+VDN  +W+V  G T HVC +++ FS+Y+P  GR
Sbjct: 275 -ENKAHVTEEEELANMLSALVLFEVNMVDNVNKWWVGMGVTRHVCRERNMFSTYVPVNGR 333

Query: 111 KLHMGNHASSDVAGIGTVVLKLTSGKELKLKDVLHVP 1
            L MGN A+S V GIG VVLK+TSGKEL L +VLHVP
Sbjct: 334 NLIMGNSATSKVVGIGKVVLKMTSGKELVLTNVLHVP 370


>ref|XP_006465748.1| PREDICTED: uncharacterized protein LOC102628178 [Citrus sinensis]
          Length = 2248

 Score =  137 bits (345), Expect = 1e-30
 Identities = 78/159 (49%), Positives = 103/159 (64%), Gaps = 7/159 (4%)
 Frame = -3

Query: 459  SKANLMEHGSSSNSKKRPNDKG---KKPAAGKFQGACYNCGKPNHMAKDCRQPKKKKTKP 289
            +KAN++EH   +   K+   KG   KK     FQG  +NC K  H   DCR PKKK+ + 
Sbjct: 1172 AKANVVEHRPKNKKNKKLGPKGGISKKQT--NFQGKYFNCDKMGHKVSDCRLPKKKREE- 1228

Query: 288  QSNANVVEE--RELTEVDMSAVVFEANLV-DNPKEWFVDTGATCHVCSDKDAFSSY-IPS 121
                NVVE   + ++++++SAVV E NLV  NP+EW++DTGAT HVCSDK  F+S+   S
Sbjct: 1229 ----NVVENITQHVSDINLSAVVSEVNLVGSNPREWWIDTGATRHVCSDKGLFTSFETVS 1284

Query: 120  TGRKLHMGNHASSDVAGIGTVVLKLTSGKELKLKDVLHV 4
             G KL MGN A S++ G G V+LK+TSGKEL L DVL+V
Sbjct: 1285 NGEKLFMGNSAMSEIEGQGNVILKMTSGKELTLNDVLYV 1323


>emb|CAN81655.1| hypothetical protein VITISV_042593 [Vitis vinifera]
          Length = 627

 Score =  117 bits (293), Expect = 2e-24
 Identities = 69/155 (44%), Positives = 89/155 (57%)
 Frame = -3

Query: 468 PMESKANLMEHGSSSNSKKRPNDKGKKPAAGKFQGACYNCGKPNHMAKDCRQPKKKKTKP 289
           P ESK NL+E          PN   K+    +    CY C K  H AK+CR  ++ K   
Sbjct: 71  PTESKTNLVE----------PNANKKRKDFSEVCWKCYICNKQGHRAKNCRLKEQSK--- 117

Query: 288 QSNANVVEERELTEVDMSAVVFEANLVDNPKEWFVDTGATCHVCSDKDAFSSYIPSTGRK 109
                   E+ELT +  + V+FEAN+VDNP E +VDTG T HV  +++ FS+Y+   GR 
Sbjct: 118 --------EKELTNMLSALVLFEANMVDNPNERWVDTGVTRHVYGERNIFSTYVLVNGRN 169

Query: 108 LHMGNHASSDVAGIGTVVLKLTSGKELKLKDVLHV 4
           L M N+A+S V GI  VVLK+T GKEL L DVLHV
Sbjct: 170 LIMRNYATSRVVGIRKVVLKMTFGKELVLTDVLHV 204


>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score =  111 bits (277), Expect = 1e-22
 Identities = 66/168 (39%), Positives = 99/168 (58%), Gaps = 13/168 (7%)
 Frame = -3

Query: 465 MESKANLME-------HGSSSNSKKRPNDKGKKPAAG----KFQGACYNCGKPNHMAKDC 319
           + +KAN++E       +    + KK+PN+K  +P+      K +G C+ CGKP H A  C
Sbjct: 226 LSAKANVIEDKPAPKRYEKKFDHKKKPNNKFSRPSGTNPTFKKKGNCFVCGKPGHHAPQC 285

Query: 318 RQPKKKKTKPQSNANVVEERELTEVDMSAVVFEANLVDNPKEWFVDTGATCHVCSDKDAF 139
           R   K    P++N   + E E T V   AVV + NLV N  +W VD+GAT H+C++++ F
Sbjct: 286 RHRAKNDYPPKAN---LAEGEDTIV---AVVSQVNLVTNVSKWVVDSGATRHICANRNVF 339

Query: 138 SSY--IPSTGRKLHMGNHASSDVAGIGTVVLKLTSGKELKLKDVLHVP 1
           +SY  +     ++++G+  ++ V G G V+LKLTSGK L L DVLHVP
Sbjct: 340 TSYTSVGDGEEQVYLGDSRTTPVLGKGKVLLKLTSGKTLALNDVLHVP 387


>dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score =  110 bits (275), Expect = 2e-22
 Identities = 69/164 (42%), Positives = 93/164 (56%), Gaps = 11/164 (6%)
 Frame = -3

Query: 459 SKANLME----HGSSSNSKK-RPNDKGK------KPAAGKFQGACYNCGKPNHMAKDCRQ 313
           S ANL++    H S +N+KK +P+ K K      K   GK +G C+ CGKP H AKDC +
Sbjct: 171 SSANLVQKKNPHASHNNNKKVKPDVKPKATTNFKKKGKGKAKGDCFVCGKPGHWAKDCPE 230

Query: 312 PKKKKTKPQSNANVVEERELTEVDMSAVVFEANLVDNPKEWFVDTGATCHVCSDKDAFSS 133
            K KK+     AN+V   +   +     +     V +  +W+VDTGA  HVC+D   FSS
Sbjct: 231 RKDKKS-----ANMVISEDGGTLGYGKFLPTVLSVCHSPDWWVDTGANIHVCADISLFSS 285

Query: 132 YIPSTGRKLHMGNHASSDVAGIGTVVLKLTSGKELKLKDVLHVP 1
           Y    G  L MGN + + V G+GTV LK TSGK ++LK+V HVP
Sbjct: 286 YQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKIVQLKNVQHVP 329


>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
          Length = 1355

 Score =  109 bits (273), Expect = 3e-22
 Identities = 57/117 (48%), Positives = 77/117 (65%), Gaps = 5/117 (4%)
 Frame = -3

Query: 336 HMAKDCRQPKKKKTKPQ----SNANVVEERELTEVDMSAVVFEANLVDNPKEWFVDTGAT 169
           H + DCR P+K K K +    S AN+VEE E  + D+  ++ E NLV NPKEWF+D+GAT
Sbjct: 318 HKSSDCRAPRKDKDKDKGKGKSQANIVEEMEDAD-DLCGMISECNLVGNPKEWFLDSGAT 376

Query: 168 CHVCSDKDAFSSYI-PSTGRKLHMGNHASSDVAGIGTVVLKLTSGKELKLKDVLHVP 1
            H+CS K+ F++Y        L MGN  ++ +AG G V+LK+TSGK L L +VLHVP
Sbjct: 377 RHICSAKEVFATYTHVEVDEDLFMGNTTTTRIAGTGKVMLKMTSGKVLTLNNVLHVP 433


>gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1303

 Score =  107 bits (267), Expect = 2e-21
 Identities = 64/163 (39%), Positives = 90/163 (55%), Gaps = 10/163 (6%)
 Frame = -3

Query: 459 SKANLME----HGSSSNSKKRPNDKGK------KPAAGKFQGACYNCGKPNHMAKDCRQP 310
           S AN+++    H S +N K +P+ K K      K + GK +G C+ CGK  H AKDC + 
Sbjct: 316 SSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKSKGKAKGDCFVCGKSGHWAKDCPER 375

Query: 309 KKKKTKPQSNANVVEERELTEVDMSAVVFEANLVDNPKEWFVDTGATCHVCSDKDAFSSY 130
           K +K+     AN++            ++     V +  +W+VDTGA  HVC+D   FSSY
Sbjct: 376 KDRKS-----ANMIISEGGGTSGYGKILPTVLSVFHSPDWWVDTGANIHVCADISLFSSY 430

Query: 129 IPSTGRKLHMGNHASSDVAGIGTVVLKLTSGKELKLKDVLHVP 1
               G  L MGN + + V G+GTV LK TSGK ++LK+V HVP
Sbjct: 431 QVGRGSSLLMGNESLAAVHGVGTVDLKFTSGKTVQLKNVQHVP 473


>gb|EEC78771.1| hypothetical protein OsI_19003 [Oryza sativa Indica Group]
          Length = 422

 Score =  107 bits (267), Expect = 2e-21
 Identities = 68/164 (41%), Positives = 92/164 (56%), Gaps = 11/164 (6%)
 Frame = -3

Query: 459 SKANLME----HGSSSNSKKRPNDKGK------KPAAGKFQGACYNCGKPNHMAKDCRQP 310
           S AN+++    H S +N K +P+ K K      K   GK +G C+ CGK  H A DC  P
Sbjct: 73  SSANMVQKKNPHASHNNKKVKPDVKPKATTNFKKKGKGKAKGDCFVCGKSGHWANDC--P 130

Query: 309 KKKKTKPQSNAN-VVEERELTEVDMSAVVFEANLVDNPKEWFVDTGATCHVCSDKDAFSS 133
           K+K  K   +AN V+ E   T      +    ++  +P +W+VDTGA  HVC+D   FSS
Sbjct: 131 KRKDRK---SANMVISESRGTSAYGKILPIVLSVFHSP-DWWVDTGANIHVCADISLFSS 186

Query: 132 YIPSTGRKLHMGNHASSDVAGIGTVVLKLTSGKELKLKDVLHVP 1
           Y    G  L MGN + + V G+GTV LK TSGK ++LK+V HVP
Sbjct: 187 YHVGRGSSLLMGNRSLAAVHGVGTVDLKFTSGKTVQLKNVQHVP 230


>gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1413

 Score =  107 bits (266), Expect = 2e-21
 Identities = 64/163 (39%), Positives = 90/163 (55%), Gaps = 10/163 (6%)
 Frame = -3

Query: 459 SKANLME----HGSSSNSKKRPNDKGK------KPAAGKFQGACYNCGKPNHMAKDCRQP 310
           S AN+++    H S +N K +P+ K K      K + GK +G C+ CGK  H AKDC + 
Sbjct: 316 SSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKSKGKAKGDCFVCGKSGHWAKDCPER 375

Query: 309 KKKKTKPQSNANVVEERELTEVDMSAVVFEANLVDNPKEWFVDTGATCHVCSDKDAFSSY 130
           K +K+     AN++            ++     V +  +W+VDTGA  HVC+D   FSSY
Sbjct: 376 KDRKS-----ANMIISEGGGTSGYGKILPRVLSVFHSPDWWVDTGANIHVCADISLFSSY 430

Query: 129 IPSTGRKLHMGNHASSDVAGIGTVVLKLTSGKELKLKDVLHVP 1
               G  L MGN + + V G+GTV LK TSGK ++LK+V HVP
Sbjct: 431 QVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQHVP 473


>gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1394

 Score =  107 bits (266), Expect = 2e-21
 Identities = 64/163 (39%), Positives = 90/163 (55%), Gaps = 10/163 (6%)
 Frame = -3

Query: 459 SKANLME----HGSSSNSKKRPNDKGK------KPAAGKFQGACYNCGKPNHMAKDCRQP 310
           S AN+++    H S +N K +P+ K K      K + GK +G C+ CGK  H AKDC + 
Sbjct: 297 SSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKSKGKAKGDCFVCGKSGHWAKDCPER 356

Query: 309 KKKKTKPQSNANVVEERELTEVDMSAVVFEANLVDNPKEWFVDTGATCHVCSDKDAFSSY 130
           K +K+     AN++            ++     V +  +W+VDTGA  HVC+D   FSSY
Sbjct: 357 KDRKS-----ANMIISEGGGTSGYGKILPRVLSVFHSPDWWVDTGANIHVCADISLFSSY 411

Query: 129 IPSTGRKLHMGNHASSDVAGIGTVVLKLTSGKELKLKDVLHVP 1
               G  L MGN + + V G+GTV LK TSGK ++LK+V HVP
Sbjct: 412 QVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQHVP 454


>gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1448

 Score =  106 bits (265), Expect = 3e-21
 Identities = 65/163 (39%), Positives = 89/163 (54%), Gaps = 10/163 (6%)
 Frame = -3

Query: 459 SKANLME----HGSSSNSKKRPNDKGK------KPAAGKFQGACYNCGKPNHMAKDCRQP 310
           S AN+++    H S +N K +P+ K K      K   GK +G C+ CGK  H AKDC + 
Sbjct: 351 SSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKGKGKAKGDCFVCGKSGHWAKDCPER 410

Query: 309 KKKKTKPQSNANVVEERELTEVDMSAVVFEANLVDNPKEWFVDTGATCHVCSDKDAFSSY 130
           K +K+     AN+V            ++     V +  +W+VDTGA  HVC+D   FSSY
Sbjct: 411 KDRKS-----ANMVISEGGGTSGYGKILPTVLSVFHSPDWWVDTGANIHVCADISLFSSY 465

Query: 129 IPSTGRKLHMGNHASSDVAGIGTVVLKLTSGKELKLKDVLHVP 1
               G  L MGN + + V G+GTV LK TSGK ++LK+V HVP
Sbjct: 466 QVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQHVP 508


>gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1298

 Score =  106 bits (265), Expect = 3e-21
 Identities = 64/163 (39%), Positives = 90/163 (55%), Gaps = 10/163 (6%)
 Frame = -3

Query: 459 SKANLME----HGSSSNSKKRPNDKGK------KPAAGKFQGACYNCGKPNHMAKDCRQP 310
           S AN+++    H S +N K +P+ K K      K + GK +G C+ CGK  H AKDC + 
Sbjct: 316 SSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKSKGKAKGDCFVCGKSGHWAKDCPER 375

Query: 309 KKKKTKPQSNANVVEERELTEVDMSAVVFEANLVDNPKEWFVDTGATCHVCSDKDAFSSY 130
           K +K+     AN++            ++     V +  +W+VDTGA  HVC+D   FSSY
Sbjct: 376 KDRKS-----ANMIISEGGGTSGYGKILPTVLSVFHSPDWWVDTGANIHVCADISLFSSY 430

Query: 129 IPSTGRKLHMGNHASSDVAGIGTVVLKLTSGKELKLKDVLHVP 1
               G  L MGN + + V G+GTV LK TSGK ++LK+V HVP
Sbjct: 431 QVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQHVP 473


>gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1408

 Score =  106 bits (265), Expect = 3e-21
 Identities = 64/163 (39%), Positives = 90/163 (55%), Gaps = 10/163 (6%)
 Frame = -3

Query: 459 SKANLME----HGSSSNSKKRPNDKGK------KPAAGKFQGACYNCGKPNHMAKDCRQP 310
           S AN+++    H S +N K +P+ K K      K + GK +G C+ CGK  H AKDC + 
Sbjct: 311 SSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKSKGKAKGDCFVCGKSGHWAKDCPER 370

Query: 309 KKKKTKPQSNANVVEERELTEVDMSAVVFEANLVDNPKEWFVDTGATCHVCSDKDAFSSY 130
           K +K+     AN++            ++     V +  +W+VDTGA  HVC+D   FSSY
Sbjct: 371 KDRKS-----ANMIISEGGGTSGYGKILPTVLSVFHSPDWWVDTGANIHVCADISLFSSY 425

Query: 129 IPSTGRKLHMGNHASSDVAGIGTVVLKLTSGKELKLKDVLHVP 1
               G  L MGN + + V G+GTV LK TSGK ++LK+V HVP
Sbjct: 426 QVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQHVP 468


>gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1479

 Score =  106 bits (265), Expect = 3e-21
 Identities = 64/163 (39%), Positives = 90/163 (55%), Gaps = 10/163 (6%)
 Frame = -3

Query: 459 SKANLME----HGSSSNSKKRPNDKGK------KPAAGKFQGACYNCGKPNHMAKDCRQP 310
           S AN+++    H S +N K +P+ K K      K + GK +G C+ CGK  H AKDC + 
Sbjct: 382 SSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKSKGKAKGDCFVCGKSGHWAKDCPER 441

Query: 309 KKKKTKPQSNANVVEERELTEVDMSAVVFEANLVDNPKEWFVDTGATCHVCSDKDAFSSY 130
           K +K+     AN++            ++     V +  +W+VDTGA  HVC+D   FSSY
Sbjct: 442 KDRKS-----ANMIISEGGGTSGYGKILPTVLSVFHSPDWWVDTGANIHVCADISLFSSY 496

Query: 129 IPSTGRKLHMGNHASSDVAGIGTVVLKLTSGKELKLKDVLHVP 1
               G  L MGN + + V G+GTV LK TSGK ++LK+V HVP
Sbjct: 497 QVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQHVP 539