BLASTX nr result

ID: Rehmannia24_contig00027364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00027364
         (555 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513832.1| conserved hypothetical protein [Ricinus comm...    59   6e-07
dbj|BAK64102.1| gag-pol polyprotein [Eustoma exaltatum subsp. ru...    57   2e-06
ref|XP_002517238.1| conserved hypothetical protein [Ricinus comm...    57   4e-06
emb|CAN63046.1| hypothetical protein VITISV_004835 [Vitis vinifera]    56   7e-06

>ref|XP_002513832.1| conserved hypothetical protein [Ricinus communis]
           gi|223546918|gb|EEF48415.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 183

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
 Frame = -1

Query: 483 KEEKAKLICQHCGGSGHEMKDCFKLHGYPDWYKQLREQ------KAVAHAVIGETDHTHK 322
           K++K    C HC   GHE   CFK+HG PDWYK+LREQ      K++A+      D  + 
Sbjct: 109 KKDKENKFCDHCRTKGHERDTCFKIHGVPDWYKELREQQKKEATKSMANMAETPLDFDNA 168

Query: 321 GDYIKETQQLDITVIVQQEVANLL 250
           G+   E          Q E+AN++
Sbjct: 169 GETKGEK---------QNEIANMV 183


>dbj|BAK64102.1| gag-pol polyprotein [Eustoma exaltatum subsp. russellianum]
          Length = 1591

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
 Frame = -1

Query: 552 GGGRDGSTNVTYGGRGRGNFRLSKEEKAKLICQHCGGSGHEMKDCFKLHGYPDWYKQLR- 376
           G G D S N       R N   S+ +K+ L+C+HCG  GH  + CF++HGYP+W++  R 
Sbjct: 276 GKGTDRSMNTI-----RSNNASSRMDKSNLLCEHCGKKGHSREKCFQIHGYPEWWEGKRI 330

Query: 375 ---EQKAVAHAVIGETDHTHKGDYIKETQQ 295
              + K  A    GE   +++     E+++
Sbjct: 331 TTGQGKTAAARTPGEGVSSNEAQMTGESRE 360


>ref|XP_002517238.1| conserved hypothetical protein [Ricinus communis]
           gi|223543609|gb|EEF45138.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 201

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 11/138 (7%)
 Frame = -1

Query: 555 GGGGRDGSTNVTYGGR-GRGNFRLSKE----EKAKLICQHCGGSGHEMKDCFKLHGYPDW 391
           G G R G  N + G    RG F   +     +KA     +C    H  + CF+L+GY DW
Sbjct: 51  GFGARGGYNNASRGNSVNRGGFTTGRAKFDVDKASRYYDYCDVGHHARETCFRLNGYLDW 110

Query: 390 YKQLREQKAVA----HAVIGETDHT--HKGDYIKETQQLDITVIVQQEVANLLNKKVSQT 229
           Y   +E+K +      A + +T      K D  K   Q  I  ++QQE+  L+ +K+   
Sbjct: 111 YHNYKERKDMGVDKPRANLADTPLVIIDKADNNKYVPQSSIANLIQQELIKLVKEKMIV- 169

Query: 228 ENDTDGASNYAHFTDFAG 175
               D A N+A   +FAG
Sbjct: 170 ---DDHAVNFARLGEFAG 184


>emb|CAN63046.1| hypothetical protein VITISV_004835 [Vitis vinifera]
          Length = 251

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
 Frame = -1

Query: 534 STNVTYGGRGRGNFRLS-KEEKAKLICQHCGGSGHEMKDCFKLHGYPDWYKQLREQ---- 370
           S N       RG F+     +K+     +C  +GH    CFKLHGY DW++QL+EQ    
Sbjct: 64  SQNFKKNRASRGIFKKKYARKKSGRHYDYCNTNGHVRDTCFKLHGYLDWFRQLQEQKEKV 123

Query: 369 --KAVAHAVIGETDHTHKGDYIKETQ-QLDITVIVQQEVANLLNKKVSQTENDTDGASNY 199
             K  A+ +    D        K+ + +  I +I+QQE+A  +  K +   N      N 
Sbjct: 124 PSKLTANVIDTPLDVVCDQKTDKDVELKSSIALIIQQEIAKYMKGKSAMDGN----YINL 179

Query: 198 AHFTDFAG 175
           AHF + AG
Sbjct: 180 AHFGELAG 187


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