BLASTX nr result

ID: Rehmannia24_contig00027347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00027347
         (586 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006342026.1| PREDICTED: auxin response factor 5-like [Sol...    59   7e-07
ref|NP_001234545.1| auxin response factor 5 [Solanum lycopersicu...    59   7e-07
ref|XP_003634382.1| PREDICTED: auxin response factor 5-like isof...    58   2e-06
ref|XP_003634381.1| PREDICTED: auxin response factor 5-like isof...    58   2e-06

>ref|XP_006342026.1| PREDICTED: auxin response factor 5-like [Solanum tuberosum]
          Length = 929

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
 Frame = +2

Query: 422 VGQELWDPQFNNSKCVSQANFPALLPHQDISNVQY--DSCVLKDLSDDNHNQNDIYS 586
           +GQ+LWD Q N+ KC SQ N    L   DI+N+Q+  DS   KDLS+++HNQ+DIYS
Sbjct: 660 IGQDLWDHQLNDVKCFSQTNLQVPL---DITNMQFLPDSYDFKDLSEESHNQSDIYS 713


>ref|NP_001234545.1| auxin response factor 5 [Solanum lycopersicum]
           gi|300253180|gb|ADJ96592.1| auxin response factor 5
           [Solanum lycopersicum] gi|310697420|gb|ADP06665.1| auxin
           response factor 5 [Solanum lycopersicum]
          Length = 930

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
 Frame = +2

Query: 422 VGQELWDPQFNNSKCVSQANFPALLPHQDISNVQY--DSCVLKDLSDDNHNQNDIYS 586
           +GQ+LWD Q N+ KC SQ N    L   DI+N+Q+  DS   KDLS+++HNQ+DIYS
Sbjct: 661 IGQDLWDHQLNDVKCFSQTNLQVPL---DITNMQFLPDSYGFKDLSEESHNQSDIYS 714


>ref|XP_003634382.1| PREDICTED: auxin response factor 5-like isoform 2 [Vitis vinifera]
          Length = 947

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
 Frame = +2

Query: 377 PLLQYSSQVDFNSSSVGQELWDPQFNNSKCVSQANFPALLPHQD--ISNVQYDSCVLKDL 550
           P + +   ++    S+GQE+WD Q NN+KC+SQA+     P QD    N    S  L+DL
Sbjct: 661 PSVVFPEAINPTLPSMGQEIWDHQLNNAKCLSQADQLPPFPQQDPCSLNCISSSSGLRDL 720

Query: 551 SDDNHNQNDIYS 586
           SDD++NQ+ IYS
Sbjct: 721 SDDSNNQSGIYS 732


>ref|XP_003634381.1| PREDICTED: auxin response factor 5-like isoform 1 [Vitis vinifera]
          Length = 925

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
 Frame = +2

Query: 377 PLLQYSSQVDFNSSSVGQELWDPQFNNSKCVSQANFPALLPHQD--ISNVQYDSCVLKDL 550
           P + +   ++    S+GQE+WD Q NN+KC+SQA+     P QD    N    S  L+DL
Sbjct: 639 PSVVFPEAINPTLPSMGQEIWDHQLNNAKCLSQADQLPPFPQQDPCSLNCISSSSGLRDL 698

Query: 551 SDDNHNQNDIYS 586
           SDD++NQ+ IYS
Sbjct: 699 SDDSNNQSGIYS 710


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