BLASTX nr result

ID: Rehmannia24_contig00027302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00027302
         (461 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...    64   3e-08
emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]    63   5e-08
ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...    61   1e-07
gb|ABN08058.1| RNA-directed DNA polymerase , related [Medicago t...    60   2e-07
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas...    60   3e-07
ref|XP_006577723.1| PREDICTED: uncharacterized mitochondrial pro...    59   5e-07
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ...    59   5e-07
emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]    59   7e-07
gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus pe...    58   1e-06
gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus pe...    58   1e-06
gb|EMJ26294.1| hypothetical protein PRUPE_ppa016563mg, partial [...    57   3e-06
ref|XP_002317957.1| predicted protein [Populus trichocarpa]            57   3e-06
ref|XP_004296207.1| PREDICTED: uncharacterized protein LOC101297...    55   1e-05

>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 23/45 (51%), Positives = 35/45 (77%)
 Frame = -3

Query: 135 FVMSIFLLPNDLCTELERMLNSFWWGKKGDDSRGINWLSWKRLSV 1
           + MS+FLLP+ +  ++E+MLNSFWWG K +   GI W+SW+RL++
Sbjct: 395 YCMSVFLLPHSIADDIEKMLNSFWWGMKNEGRGGIRWMSWERLTM 439


>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
          Length = 517

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 26/43 (60%), Positives = 31/43 (72%)
 Frame = -3

Query: 135 FVMSIFLLPNDLCTELERMLNSFWWGKKGDDSRGINWLSWKRL 7
           + MS FLLP  L  EL++M+NSFWWG K D  R INWLSW +L
Sbjct: 204 YCMSTFLLPISLSEELQKMMNSFWWGPKSDGGRRINWLSWDKL 246


>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 23/45 (51%), Positives = 35/45 (77%)
 Frame = -3

Query: 135 FVMSIFLLPNDLCTELERMLNSFWWGKKGDDSRGINWLSWKRLSV 1
           F+M++FLLP +LC E+ERMLN+ W+   G +++GI W+SW+ L V
Sbjct: 244 FIMNVFLLPFELCVEIERMLNALWFSSNGRENQGIRWISWECLCV 288


>gb|ABN08058.1| RNA-directed DNA polymerase , related [Medicago truncatula]
          Length = 64

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 23/45 (51%), Positives = 35/45 (77%)
 Frame = -3

Query: 135 FVMSIFLLPNDLCTELERMLNSFWWGKKGDDSRGINWLSWKRLSV 1
           + MSIFL+P+ +  E+E+++NSFWW   G+ ++GI WLSW +LSV
Sbjct: 12  YFMSIFLIPSSIGDEIEKIMNSFWWENGGNRNKGIKWLSWDKLSV 56


>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 573

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 24/45 (53%), Positives = 32/45 (71%)
 Frame = -3

Query: 135 FVMSIFLLPNDLCTELERMLNSFWWGKKGDDSRGINWLSWKRLSV 1
           + M  FL+P  LC ELERM+NSF+WG K +  RGINW+ W  L++
Sbjct: 334 YCMGAFLIPASLCEELERMMNSFYWGSKKNGRRGINWMRWDFLTL 378


>ref|XP_006577723.1| PREDICTED: uncharacterized mitochondrial protein AtMg00310-like
           [Glycine max]
          Length = 173

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 24/45 (53%), Positives = 31/45 (68%)
 Frame = -3

Query: 135 FVMSIFLLPNDLCTELERMLNSFWWGKKGDDSRGINWLSWKRLSV 1
           + MS FL+P  L  E++RM+NS WWG    + RGI WLSW RL+V
Sbjct: 18  YCMSTFLIPISLAEEIQRMINSLWWGCNRGEGRGIKWLSWDRLAV 62


>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 612

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 24/45 (53%), Positives = 33/45 (73%)
 Frame = -3

Query: 135 FVMSIFLLPNDLCTELERMLNSFWWGKKGDDSRGINWLSWKRLSV 1
           +VMSIF LP  L + +E+M NSFWWG    +  GINWL+W++LS+
Sbjct: 76  YVMSIFQLPATLISTIEKMTNSFWWGHGRTNQHGINWLNWEKLSM 120


>emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]
          Length = 1484

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 24/38 (63%), Positives = 28/38 (73%)
 Frame = -3

Query: 120 FLLPNDLCTELERMLNSFWWGKKGDDSRGINWLSWKRL 7
           FLLP  L  EL++M+NSFWWG K D  R INWLSW +L
Sbjct: 328 FLLPISLSEELQKMMNSFWWGXKSDGGRRINWLSWDKL 365


>gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus persica]
          Length = 1275

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 23/44 (52%), Positives = 35/44 (79%)
 Frame = -3

Query: 138 IFVMSIFLLPNDLCTELERMLNSFWWGKKGDDSRGINWLSWKRL 7
           ++VMS FLLP  LC E+E+M+  FWWG++G ++R I+W+ W+RL
Sbjct: 740 LYVMSCFLLPQGLCHEIEQMMARFWWGQQG-ENRKIHWMRWERL 782


>gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
          Length = 1755

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 23/44 (52%), Positives = 35/44 (79%)
 Frame = -3

Query: 138  IFVMSIFLLPNDLCTELERMLNSFWWGKKGDDSRGINWLSWKRL 7
            ++VMS FLLP  LC E+E+M+  FWWG++G ++R I+W+ W+RL
Sbjct: 1220 LYVMSCFLLPQGLCHEIEQMMARFWWGQQG-ENRKIHWMRWERL 1262


>gb|EMJ26294.1| hypothetical protein PRUPE_ppa016563mg, partial [Prunus persica]
          Length = 925

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 22/44 (50%), Positives = 35/44 (79%)
 Frame = -3

Query: 138 IFVMSIFLLPNDLCTELERMLNSFWWGKKGDDSRGINWLSWKRL 7
           ++VM+ FLLP  LC E+E+M+  FWWG++G ++R I+W+ W+RL
Sbjct: 371 LYVMNCFLLPQGLCHEIEQMMARFWWGQQG-ENRKIHWMRWERL 413


>ref|XP_002317957.1| predicted protein [Populus trichocarpa]
          Length = 200

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/41 (56%), Positives = 27/41 (65%)
 Frame = -3

Query: 129 MSIFLLPNDLCTELERMLNSFWWGKKGDDSRGINWLSWKRL 7
           M +FLLP  LC EL RM+NS+WWG   +  RGI W  W RL
Sbjct: 1   MGVFLLPVYLCEELRRMMNSYWWGTNQEHGRGIIWQGWDRL 41


>ref|XP_004296207.1| PREDICTED: uncharacterized protein LOC101297422 [Fragaria vesca
           subsp. vesca]
          Length = 1096

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 20/43 (46%), Positives = 33/43 (76%)
 Frame = -3

Query: 135 FVMSIFLLPNDLCTELERMLNSFWWGKKGDDSRGINWLSWKRL 7
           ++MS F LP  +C+ ++R++  FWWG KGDD R I+W++W++L
Sbjct: 568 YIMSCFELPKHMCSAMQRLMARFWWGDKGDD-RKIHWVAWEKL 609


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