BLASTX nr result
ID: Rehmannia24_contig00027245
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00027245
(458 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB98563.1| General transcription factor IIH subunit 2 [Morus... 117 2e-24
ref|XP_004237420.1| PREDICTED: general transcription factor IIH ... 117 2e-24
ref|XP_006363939.1| PREDICTED: general transcription factor IIH ... 115 8e-24
ref|XP_006363938.1| PREDICTED: general transcription factor IIH ... 115 8e-24
ref|XP_006366483.1| PREDICTED: general transcription factor IIH ... 113 2e-23
emb|CBI16283.3| unnamed protein product [Vitis vinifera] 112 5e-23
ref|XP_002284994.1| PREDICTED: general transcription factor IIH ... 112 5e-23
gb|EOY33067.1| General transcription factor II H2 isoform 1 [The... 111 1e-22
ref|XP_004309875.1| PREDICTED: TFIIH basal transcription factor ... 111 1e-22
ref|XP_002526366.1| btf, putative [Ricinus communis] gi|22353432... 110 1e-22
ref|XP_004158141.1| PREDICTED: serine/threonine-protein kinase T... 109 3e-22
ref|XP_004143721.1| PREDICTED: general transcription factor IIH ... 109 3e-22
gb|EMJ06452.1| hypothetical protein PRUPE_ppa006259mg [Prunus pe... 108 1e-21
gb|EPS68872.1| hypothetical protein M569_05896, partial [Genlise... 106 4e-21
ref|XP_006489789.1| PREDICTED: general transcription factor IIH ... 105 5e-21
ref|XP_006489788.1| PREDICTED: general transcription factor IIH ... 105 5e-21
ref|XP_003554116.1| PREDICTED: general transcription factor IIH ... 105 8e-21
ref|XP_003537621.1| PREDICTED: general transcription factor IIH ... 105 8e-21
gb|ACU17743.1| unknown [Glycine max] 105 8e-21
ref|XP_006420615.1| hypothetical protein CICLE_v10005033mg [Citr... 104 1e-20
>gb|EXB98563.1| General transcription factor IIH subunit 2 [Morus notabilis]
Length = 423
Score = 117 bits (293), Expect = 2e-24
Identities = 54/61 (88%), Positives = 59/61 (96%)
Frame = +3
Query: 276 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLY 455
GL+AWERTYADERSWESLQEDESGLLRPIDNKT YHAQYRRRLR++SA RIQKGLIRYL+
Sbjct: 29 GLEAWERTYADERSWESLQEDESGLLRPIDNKTFYHAQYRRRLRSASAVRIQKGLIRYLF 88
Query: 456 I 458
+
Sbjct: 89 L 89
>ref|XP_004237420.1| PREDICTED: general transcription factor IIH subunit 2-like [Solanum
lycopersicum]
Length = 414
Score = 117 bits (293), Expect = 2e-24
Identities = 56/61 (91%), Positives = 59/61 (96%)
Frame = +3
Query: 276 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLY 455
G +AWERTYADERSWESLQEDESGLLRPIDNKTL HAQYRRRLRT++AARIQKGLIRYLY
Sbjct: 21 GREAWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYRRRLRTATAARIQKGLIRYLY 80
Query: 456 I 458
I
Sbjct: 81 I 81
>ref|XP_006363939.1| PREDICTED: general transcription factor IIH subunit 2-like isoform
X2 [Solanum tuberosum]
Length = 369
Score = 115 bits (287), Expect = 8e-24
Identities = 55/61 (90%), Positives = 58/61 (95%)
Frame = +3
Query: 276 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLY 455
G +AWERTYADERSWESLQEDESGLLRPIDN TL HAQYRRRLRT++AARIQKGLIRYLY
Sbjct: 21 GREAWERTYADERSWESLQEDESGLLRPIDNTTLSHAQYRRRLRTATAARIQKGLIRYLY 80
Query: 456 I 458
I
Sbjct: 81 I 81
>ref|XP_006363938.1| PREDICTED: general transcription factor IIH subunit 2-like isoform
X1 [Solanum tuberosum]
Length = 414
Score = 115 bits (287), Expect = 8e-24
Identities = 55/61 (90%), Positives = 58/61 (95%)
Frame = +3
Query: 276 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLY 455
G +AWERTYADERSWESLQEDESGLLRPIDN TL HAQYRRRLRT++AARIQKGLIRYLY
Sbjct: 21 GREAWERTYADERSWESLQEDESGLLRPIDNTTLSHAQYRRRLRTATAARIQKGLIRYLY 80
Query: 456 I 458
I
Sbjct: 81 I 81
>ref|XP_006366483.1| PREDICTED: general transcription factor IIH subunit 2-like [Solanum
tuberosum]
Length = 418
Score = 113 bits (283), Expect = 2e-23
Identities = 55/61 (90%), Positives = 58/61 (95%)
Frame = +3
Query: 276 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLY 455
G +AWERTYADERSWESLQEDESGLLR IDNKTL HAQYRRRLRT++AARIQKGLIRYLY
Sbjct: 21 GREAWERTYADERSWESLQEDESGLLRLIDNKTLSHAQYRRRLRTATAARIQKGLIRYLY 80
Query: 456 I 458
I
Sbjct: 81 I 81
>emb|CBI16283.3| unnamed protein product [Vitis vinifera]
Length = 494
Score = 112 bits (280), Expect = 5e-23
Identities = 54/65 (83%), Positives = 59/65 (90%), Gaps = 4/65 (6%)
Frame = +3
Query: 276 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLR----TSSAARIQKGLI 443
GLDAWER YADERSWESLQEDESGLLRPIDNKT+YHAQYRRR+R +++ ARIQKGLI
Sbjct: 96 GLDAWERAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLI 155
Query: 444 RYLYI 458
RYLYI
Sbjct: 156 RYLYI 160
>ref|XP_002284994.1| PREDICTED: general transcription factor IIH subunit 2 [Vitis
vinifera]
Length = 433
Score = 112 bits (280), Expect = 5e-23
Identities = 54/65 (83%), Positives = 59/65 (90%), Gaps = 4/65 (6%)
Frame = +3
Query: 276 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLR----TSSAARIQKGLI 443
GLDAWER YADERSWESLQEDESGLLRPIDNKT+YHAQYRRR+R +++ ARIQKGLI
Sbjct: 35 GLDAWERAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLI 94
Query: 444 RYLYI 458
RYLYI
Sbjct: 95 RYLYI 99
>gb|EOY33067.1| General transcription factor II H2 isoform 1 [Theobroma cacao]
gi|508785812|gb|EOY33068.1| General transcription factor
II H2 isoform 1 [Theobroma cacao]
gi|508785813|gb|EOY33069.1| General transcription factor
II H2 isoform 1 [Theobroma cacao]
Length = 420
Score = 111 bits (277), Expect = 1e-22
Identities = 54/64 (84%), Positives = 58/64 (90%), Gaps = 4/64 (6%)
Frame = +3
Query: 279 LDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLR----TSSAARIQKGLIR 446
LDAWERTY DERSWESLQEDESGLLRPIDNK LYH+QYRRRLR T++AARIQKGLIR
Sbjct: 26 LDAWERTYTDERSWESLQEDESGLLRPIDNKALYHSQYRRRLRSLSSTATAARIQKGLIR 85
Query: 447 YLYI 458
YLY+
Sbjct: 86 YLYL 89
>ref|XP_004309875.1| PREDICTED: TFIIH basal transcription factor complex p47
subunit-like [Fragaria vesca subsp. vesca]
Length = 420
Score = 111 bits (277), Expect = 1e-22
Identities = 52/61 (85%), Positives = 57/61 (93%)
Frame = +3
Query: 276 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLY 455
GL AWER YADERSWESLQEDESGLLRPIDN++L+HAQYRRRLR ++ ARIQKGLIRYLY
Sbjct: 25 GLAAWERAYADERSWESLQEDESGLLRPIDNQSLHHAQYRRRLRAATTARIQKGLIRYLY 84
Query: 456 I 458
I
Sbjct: 85 I 85
>ref|XP_002526366.1| btf, putative [Ricinus communis] gi|223534325|gb|EEF36037.1| btf,
putative [Ricinus communis]
Length = 465
Score = 110 bits (276), Expect = 1e-22
Identities = 52/62 (83%), Positives = 59/62 (95%), Gaps = 1/62 (1%)
Frame = +3
Query: 276 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRT-SSAARIQKGLIRYL 452
GLDAWERTY DERSWE+LQEDESGLLRPIDNK +YHAQYRRR+R+ S++ARIQKGLIR+L
Sbjct: 27 GLDAWERTYTDERSWEALQEDESGLLRPIDNKAIYHAQYRRRIRSLSTSARIQKGLIRFL 86
Query: 453 YI 458
YI
Sbjct: 87 YI 88
>ref|XP_004158141.1| PREDICTED: serine/threonine-protein kinase TIO-like [Cucumis
sativus]
Length = 899
Score = 109 bits (273), Expect = 3e-22
Identities = 54/65 (83%), Positives = 58/65 (89%), Gaps = 4/65 (6%)
Frame = +3
Query: 276 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSA----ARIQKGLI 443
GL AWERTYAD+RSWE+LQEDESGLLRPIDNK +YHAQYRRRLRT S+ ARIQKGLI
Sbjct: 24 GLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYHAQYRRRLRTLSSLATTARIQKGLI 83
Query: 444 RYLYI 458
RYLYI
Sbjct: 84 RYLYI 88
>ref|XP_004143721.1| PREDICTED: general transcription factor IIH subunit 2-like [Cucumis
sativus]
Length = 423
Score = 109 bits (273), Expect = 3e-22
Identities = 54/65 (83%), Positives = 58/65 (89%), Gaps = 4/65 (6%)
Frame = +3
Query: 276 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSA----ARIQKGLI 443
GL AWERTYAD+RSWE+LQEDESGLLRPIDNK +YHAQYRRRLRT S+ ARIQKGLI
Sbjct: 24 GLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYHAQYRRRLRTLSSLATTARIQKGLI 83
Query: 444 RYLYI 458
RYLYI
Sbjct: 84 RYLYI 88
>gb|EMJ06452.1| hypothetical protein PRUPE_ppa006259mg [Prunus persica]
Length = 420
Score = 108 bits (269), Expect = 1e-21
Identities = 51/61 (83%), Positives = 56/61 (91%)
Frame = +3
Query: 276 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLY 455
GL AWER YADERSWESLQEDESGLL+PIDN++L HAQYRRRLR +S ARIQKGLIRY+Y
Sbjct: 26 GLAAWERAYADERSWESLQEDESGLLQPIDNQSLKHAQYRRRLRAASTARIQKGLIRYVY 85
Query: 456 I 458
I
Sbjct: 86 I 86
>gb|EPS68872.1| hypothetical protein M569_05896, partial [Genlisea aurea]
Length = 399
Score = 106 bits (264), Expect = 4e-21
Identities = 47/60 (78%), Positives = 56/60 (93%)
Frame = +3
Query: 279 LDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLYI 458
+DAWER+YADERSWESLQEDESGLLR +D +TL+HAQYRRRLRT + +R+QKGLIRYLY+
Sbjct: 22 VDAWERSYADERSWESLQEDESGLLRSVDTRTLHHAQYRRRLRTKTDSRVQKGLIRYLYV 81
>ref|XP_006489789.1| PREDICTED: general transcription factor IIH subunit 2-like isoform
X2 [Citrus sinensis]
Length = 387
Score = 105 bits (263), Expect = 5e-21
Identities = 50/65 (76%), Positives = 57/65 (87%), Gaps = 4/65 (6%)
Frame = +3
Query: 276 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLR----TSSAARIQKGLI 443
GL+AWER+YAD+RSWE+LQEDESG LRPIDN +YHAQYRRRLR T++ ARIQKGLI
Sbjct: 26 GLEAWERSYADDRSWEALQEDESGFLRPIDNSAIYHAQYRRRLRGRSLTAATARIQKGLI 85
Query: 444 RYLYI 458
RYLYI
Sbjct: 86 RYLYI 90
>ref|XP_006489788.1| PREDICTED: general transcription factor IIH subunit 2-like isoform
X1 [Citrus sinensis]
Length = 424
Score = 105 bits (263), Expect = 5e-21
Identities = 50/65 (76%), Positives = 57/65 (87%), Gaps = 4/65 (6%)
Frame = +3
Query: 276 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLR----TSSAARIQKGLI 443
GL+AWER+YAD+RSWE+LQEDESG LRPIDN +YHAQYRRRLR T++ ARIQKGLI
Sbjct: 26 GLEAWERSYADDRSWEALQEDESGFLRPIDNSAIYHAQYRRRLRGRSLTAATARIQKGLI 85
Query: 444 RYLYI 458
RYLYI
Sbjct: 86 RYLYI 90
>ref|XP_003554116.1| PREDICTED: general transcription factor IIH subunit 2 [Glycine max]
Length = 420
Score = 105 bits (261), Expect = 8e-21
Identities = 51/65 (78%), Positives = 57/65 (87%), Gaps = 4/65 (6%)
Frame = +3
Query: 276 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSA----ARIQKGLI 443
GL+AWERTYA++RSWE+LQEDESGLLRPID +YHAQYRRRLRT +A ARIQKGLI
Sbjct: 23 GLEAWERTYAEDRSWEALQEDESGLLRPIDTTAIYHAQYRRRLRTLAATAATARIQKGLI 82
Query: 444 RYLYI 458
RYLYI
Sbjct: 83 RYLYI 87
>ref|XP_003537621.1| PREDICTED: general transcription factor IIH subunit 2-like isoform
X1 [Glycine max] gi|571487648|ref|XP_006590708.1|
PREDICTED: general transcription factor IIH subunit
2-like isoform X2 [Glycine max]
gi|571487650|ref|XP_006590709.1| PREDICTED: general
transcription factor IIH subunit 2-like isoform X3
[Glycine max] gi|571487652|ref|XP_006590710.1|
PREDICTED: general transcription factor IIH subunit
2-like isoform X4 [Glycine max]
gi|571487654|ref|XP_006590711.1| PREDICTED: general
transcription factor IIH subunit 2-like isoform X5
[Glycine max]
Length = 419
Score = 105 bits (261), Expect = 8e-21
Identities = 51/65 (78%), Positives = 57/65 (87%), Gaps = 4/65 (6%)
Frame = +3
Query: 276 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSA----ARIQKGLI 443
GL+AWERTYA++RSWE+LQEDESGLLRPID +YHAQYRRRLRT +A ARIQKGLI
Sbjct: 23 GLEAWERTYAEDRSWEALQEDESGLLRPIDTTAIYHAQYRRRLRTLAATAATARIQKGLI 82
Query: 444 RYLYI 458
RYLYI
Sbjct: 83 RYLYI 87
>gb|ACU17743.1| unknown [Glycine max]
Length = 214
Score = 105 bits (261), Expect = 8e-21
Identities = 51/65 (78%), Positives = 57/65 (87%), Gaps = 4/65 (6%)
Frame = +3
Query: 276 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSA----ARIQKGLI 443
GL+AWERTYA++RSWE+LQEDESGLLRPID +YHAQYRRRLRT +A ARIQKGLI
Sbjct: 23 GLEAWERTYAEDRSWEALQEDESGLLRPIDTTAIYHAQYRRRLRTLAATAATARIQKGLI 82
Query: 444 RYLYI 458
RYLYI
Sbjct: 83 RYLYI 87
>ref|XP_006420615.1| hypothetical protein CICLE_v10005033mg [Citrus clementina]
gi|557522488|gb|ESR33855.1| hypothetical protein
CICLE_v10005033mg [Citrus clementina]
Length = 424
Score = 104 bits (260), Expect = 1e-20
Identities = 50/65 (76%), Positives = 56/65 (86%), Gaps = 4/65 (6%)
Frame = +3
Query: 276 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLR----TSSAARIQKGLI 443
GL+AWER+YAD+RSWE+LQEDESG LRPIDN +YHAQYRRRLR T + ARIQKGLI
Sbjct: 26 GLEAWERSYADDRSWEALQEDESGFLRPIDNSAIYHAQYRRRLRGRSLTVATARIQKGLI 85
Query: 444 RYLYI 458
RYLYI
Sbjct: 86 RYLYI 90