BLASTX nr result

ID: Rehmannia24_contig00027169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00027169
         (433 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635184.1| PREDICTED: transcription factor bHLH123-like...    66   4e-09
gb|EOY28508.1| Transcription factor, putative [Theobroma cacao]        55   7e-06

>ref|XP_003635184.1| PREDICTED: transcription factor bHLH123-like [Vitis vinifera]
           gi|297735889|emb|CBI18658.3| unnamed protein product
           [Vitis vinifera]
          Length = 464

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 57/146 (39%), Positives = 75/146 (51%), Gaps = 17/146 (11%)
 Frame = -2

Query: 411 DSFSNSFKQVNQNIPLEQQPLNSTEFG--ATNNCQGLFDGFPLNSASY----KLLQNLFD 250
           DS   + K +NQ   L+QQ LNS      +T  CQG   GFP+ SASY     LLQ L+D
Sbjct: 156 DSSICALKPMNQGFALDQQRLNSINSSGDSTVTCQGFSSGFPMGSASYGYPSTLLQGLYD 215

Query: 249 IDSDQPQQSLLDNNHQAMNYSS---DQVNSNEL--ILPTNSLMVNPSFGNPLPFNNI--- 94
            D  QPQQ L DN  ++MNYSS    + + NEL    P  S  + PS     P +++   
Sbjct: 216 PD-PQPQQYLFDN--RSMNYSSMANYRTSMNELSPSWPKYSPYMKPSLPKQQPNSHLHFT 272

Query: 93  INAPSWSNVDAS---TQSQFFPSSLS 25
            N P W+   A+    ++ FFPS  S
Sbjct: 273 NNTPFWNASAAALNDIRASFFPSPQS 298


>gb|EOY28508.1| Transcription factor, putative [Theobroma cacao]
          Length = 466

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 56/158 (35%), Positives = 76/158 (48%), Gaps = 27/158 (17%)
 Frame = -2

Query: 411 DSFSNSFKQVNQNIPLEQQPLNSTEFGATNNCQGLFDGFPLNSASY-----KLLQNLFDI 247
           DS   +FK +NQ+  + +         +T  CQGL  GFP+ SASY      LLQ+LF+ 
Sbjct: 164 DSSITTFKPINQDFSVTKSG------DSTPACQGLSAGFPMGSASYGYPSTVLLQSLFEP 217

Query: 246 DSDQPQQSLLDNNHQAMNYSSDQ----VNSNEL-----------ILPTNSLMVNPS---F 121
           D  QPQQSLL  N++++NY S       N+NEL           + P+      PS   F
Sbjct: 218 D-PQPQQSLL--NNRSINYMSAPATYGANANELSSPPWPKLAPCLRPSLPKQQQPSSLHF 274

Query: 120 GNPLPFNNIINAPSWSNVDA----STQSQFFPSSLSTK 19
            N  PF N  ++   S+V A    S QSQF   +   K
Sbjct: 275 SNNTPFWN-ASSTGLSDVKASFLPSPQSQFLAQTFDEK 311


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