BLASTX nr result

ID: Rehmannia24_contig00026987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00026987
         (387 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004232170.1| PREDICTED: 50S ribosomal protein L7/L12-like...    69   8e-10
ref|XP_002521510.1| 50S ribosomal protein L7/L12, putative [Rici...    68   1e-09
ref|XP_006338377.1| PREDICTED: 54S ribosomal protein L12, mitoch...    67   2e-09
ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitoch...    62   6e-08
ref|XP_004287857.1| PREDICTED: 54S ribosomal protein L12, mitoch...    59   7e-07
gb|EMJ01773.1| hypothetical protein PRUPE_ppa011851mg [Prunus pe...    58   1e-06
gb|EMJ03867.1| hypothetical protein PRUPE_ppa012443mg [Prunus pe...    57   2e-06
gb|EOX90970.1| 50S ribosomal protein L7/L12, putative [Theobroma...    57   3e-06
ref|XP_002275239.1| PREDICTED: 60 ribosomal protein L12, mitocho...    55   7e-06

>ref|XP_004232170.1| PREDICTED: 50S ribosomal protein L7/L12-like [Solanum lycopersicum]
          Length = 207

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 35/41 (85%), Positives = 37/41 (90%)
 Frame = -1

Query: 186 FSASAQESKPAPSERVFGIVDEISGLTLLEISDLTEVLRKK 64
           F+ SAQESKPAPSERV  IVDEISGLTLLE+SDL EVLRKK
Sbjct: 56  FTTSAQESKPAPSERVSAIVDEISGLTLLEVSDLGEVLRKK 96


>ref|XP_002521510.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
           gi|223539188|gb|EEF40781.1| 50S ribosomal protein
           L7/L12, putative [Ricinus communis]
          Length = 192

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 46/84 (54%), Positives = 58/84 (69%), Gaps = 7/84 (8%)
 Frame = -1

Query: 294 MRH------HCTRLVSQTLLRRPITPSPQIESPLKNPNLIRCFSASAQE-SKPAPSERVF 136
           MRH      H +R + +TL R P T +PQ   P ++PNLI  F++ AQE + PAPS++V 
Sbjct: 1   MRHFRLISPHLSR-IRKTLFRNP-TFNPQSTIP-RSPNLIYQFTSIAQEPNPPAPSDKVA 57

Query: 135 GIVDEISGLTLLEISDLTEVLRKK 64
            +VDEIS LTLLEISDLTEVLR K
Sbjct: 58  ALVDEISELTLLEISDLTEVLRNK 81


>ref|XP_006338377.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Solanum
           tuberosum]
          Length = 207

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/41 (82%), Positives = 36/41 (87%)
 Frame = -1

Query: 186 FSASAQESKPAPSERVFGIVDEISGLTLLEISDLTEVLRKK 64
           F+ SAQESKP PSERV  IVDEISGLTLLE+SDL EVLRKK
Sbjct: 56  FTTSAQESKPVPSERVSAIVDEISGLTLLEVSDLGEVLRKK 96


>ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Cucumis
           sativus] gi|449491404|ref|XP_004158886.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449491408|ref|XP_004158887.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
          Length = 202

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 30/43 (69%), Positives = 38/43 (88%)
 Frame = -1

Query: 192 RCFSASAQESKPAPSERVFGIVDEISGLTLLEISDLTEVLRKK 64
           R ++ ++ ES+PAPSERV  IVDEISGLTLLE++DLTEVLR+K
Sbjct: 49  RNYTTASPESRPAPSERVSAIVDEISGLTLLEVADLTEVLREK 91


>ref|XP_004287857.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Fragaria
           vesca subsp. vesca]
          Length = 188

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
 Frame = -1

Query: 276 RLVSQTL--LRRPITPSPQIES-PLKNPNLIRCFSASAQESKPAPSERVFGIVDEISGLT 106
           RL+S  L  + + +  +P + S P  + + +  ++ +A + +P P E V  I DE+SGLT
Sbjct: 5   RLISPQLSQIHKTLHQNPNLRSRPHLSSHFVATYTTAAPQKRPPPPENVSAIADEVSGLT 64

Query: 105 LLEISDLTEVLRKK 64
           LLEISDLTEVLR+K
Sbjct: 65  LLEISDLTEVLREK 78


>gb|EMJ01773.1| hypothetical protein PRUPE_ppa011851mg [Prunus persica]
          Length = 193

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 31/63 (49%), Positives = 39/63 (61%), Gaps = 14/63 (22%)
 Frame = -1

Query: 210 KNPNLIRC--------------FSASAQESKPAPSERVFGIVDEISGLTLLEISDLTEVL 73
           ++PNL+ C              ++  A E +P PSE V  I DEISGLTLLE+SDLTEVL
Sbjct: 21  QSPNLLSCLQSKPRICSHFVCNYTTDAPEQRPPPSETVSAIADEISGLTLLEVSDLTEVL 80

Query: 72  RKK 64
           R+K
Sbjct: 81  REK 83


>gb|EMJ03867.1| hypothetical protein PRUPE_ppa012443mg [Prunus persica]
          Length = 169

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/56 (55%), Positives = 39/56 (69%)
 Frame = -1

Query: 231 PQIESPLKNPNLIRCFSASAQESKPAPSERVFGIVDEISGLTLLEISDLTEVLRKK 64
           PQI S     + +  ++ +A E +P PSE V  I DEISGLTLLE+SDLTEVLR+K
Sbjct: 32  PQISS-----HFVCNYTTAAPEQRPPPSETVSAIADEISGLTLLEVSDLTEVLREK 82


>gb|EOX90970.1| 50S ribosomal protein L7/L12, putative [Theobroma cacao]
          Length = 196

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 6/72 (8%)
 Frame = -1

Query: 261 TLLRRPITPSPQIESPLKNPNLI-----RCFSASAQES-KPAPSERVFGIVDEISGLTLL 100
           T +++ +  +P I S +++ N +     R ++  +QES K APS +V  IVDE+SGLTLL
Sbjct: 12  TRIQKTLHQNPNISSSIQSLNKVNHTFSRNYTTPSQESTKQAPSGKVAAIVDELSGLTLL 71

Query: 99  EISDLTEVLRKK 64
           E+ DLTEVLR+K
Sbjct: 72  EVMDLTEVLRQK 83


>ref|XP_002275239.1| PREDICTED: 60 ribosomal protein L12, mitochondrial [Vitis vinifera]
          Length = 189

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 30/46 (65%), Positives = 36/46 (78%)
 Frame = -1

Query: 201 NLIRCFSASAQESKPAPSERVFGIVDEISGLTLLEISDLTEVLRKK 64
           N +  +++SAQ     PSERV  IVDEISGLTLLE+SDLTE+LRKK
Sbjct: 40  NFVLKYTSSAQ----VPSERVSSIVDEISGLTLLEVSDLTELLRKK 81


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