BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00026868
         (802 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626...    77   5e-15
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A...    77   5e-15
ref|XP_004301837.1| PREDICTED: putative ribonuclease H protein A...    69   9e-15
gb|EMJ08780.1| hypothetical protein PRUPE_ppa018489mg, partial [...    70   3e-14
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    76   5e-14
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621...    71   2e-13
gb|EMJ20801.1| hypothetical protein PRUPE_ppa023113mg, partial [...    70   3e-13
gb|EMJ21280.1| hypothetical protein PRUPE_ppa024663mg [Prunus pe...    73   4e-13
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ...    80   6e-13
ref|XP_004288743.1| PREDICTED: putative ribonuclease H protein A...    74   8e-13
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    73   1e-12
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    75   1e-12
gb|EMJ25879.1| hypothetical protein PRUPE_ppa025799mg [Prunus pe...    62   1e-12
gb|EPS69206.1| hypothetical protein M569_05560, partial [Genlise...    60   2e-12
gb|AAB84340.1| putative non-LTR retroelement reverse transcripta...    70   3e-12
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    70   6e-12
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A...    77   9e-12
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A...    77   9e-12
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A...    77   9e-12
ref|NP_194638.1| ribonuclease H-like protein [Arabidopsis thalia...    77   9e-12

>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
          Length = 1452

 Score = 77.4 bits (189), Expect(2) = 5e-15
 Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
 Frame = +3

Query: 237  FEKKGEYTIRSSYSDLIQEKIQKFKPAESSSLALNSITFWKRSWKLKVRENIKQFIWRCC 416
            F+KKGEY+++S Y   + +       + +SS  L     WK  W L + E +K F+WR  
Sbjct: 1099 FDKKGEYSVKSGYQLALNQNFPNEPESSNSSSRL-----WKIPWMLDLPEKVKIFMWRAL 1153

Query: 417  SQSIPTSDALTKKGCLIDHICIKICGMFEETIEHVLFHCHRAQLVWKFAPIEWDGLLDKS 596
               +PT++ L K+  L + IC + C +  ET+ HVL  C  A+ +W  AP+      D +
Sbjct: 1154 KNILPTAENLWKRRSLQEPICQR-CKLQVETVSHVLIECKAARKIWDLAPLIVQPSKDHN 1212

Query: 597  SRFV-----YW*KIVCGICKDVTSEFRVQLSTYIRWWLWKSWNLWMFQ 725
              F       W +         +S    +L     W +W + N ++F+
Sbjct: 1213 QDFFSAIQEMWSR---------SSTAEAELMIVYCWVIWSARNKFIFE 1251



 Score = 30.4 bits (67), Expect(2) = 5e-15
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +2

Query: 5    DGKSIKIWQDLWIPDSMSFKPFPIPFDPSAPVWVCDLFSPGQNNW 139
            DGK + +++D WIP   +F+P      P   V V DL    +N W
Sbjct: 1022 DGKKVLVYKDKWIPRPATFQPISPKTLPHETV-VADLID-SENKW 1064


>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 765

 Score = 77.4 bits (189), Expect(2) = 5e-15
 Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
 Frame = +3

Query: 237 FEKKGEYTIRSSYSDLIQEKIQKFKPAESSSLALNSITFWKRSWKLKVRENIKQFIWRCC 416
           F+KKGEY+++S Y   + +       + +SS  L     WK  W L + E +K F+WR  
Sbjct: 412 FDKKGEYSVKSGYQLALNQNFPNEPESSNSSSRL-----WKIPWMLDLPEKVKIFMWRAL 466

Query: 417 SQSIPTSDALTKKGCLIDHICIKICGMFEETIEHVLFHCHRAQLVWKFAPIEWDGLLDKS 596
              +PT++ L K+  L + IC + C +  ET+ HVL  C  A+ +W  AP+      D +
Sbjct: 467 KNILPTAENLWKRRSLQEPICQR-CKLQVETVSHVLIECKAARKIWDLAPLIVQPSKDHN 525

Query: 597 SRFV-----YW*KIVCGICKDVTSEFRVQLSTYIRWWLWKSWNLWMFQ 725
             F       W +         +S    +L     W +W + N ++F+
Sbjct: 526 QDFFSAIQEMWSR---------SSTAEAELMIVYCWVIWSARNKFIFE 564



 Score = 30.4 bits (67), Expect(2) = 5e-15
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +2

Query: 5   DGKSIKIWQDLWIPDSMSFKPFPIPFDPSAPVWVCDLFSPGQNNW 139
           DGK + +++D WIP   +F+P      P   V V DL    +N W
Sbjct: 335 DGKKVLVYKDKWIPRPATFQPISPKTLPHETV-VADLID-SENKW 377


>ref|XP_004301837.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 420

 Score = 69.3 bits (168), Expect(2) = 9e-15
 Identities = 46/163 (28%), Positives = 76/163 (46%)
 Frame = +3

Query: 237 FEKKGEYTIRSSYSDLIQEKIQKFKPAESSSLALNSITFWKRSWKLKVRENIKQFIWRCC 416
           F+K G Y++RS Y   +   +   +   SSS    S   WK+ WK++V   +K F+WR  
Sbjct: 113 FDKHGLYSVRSGYH--LAGGVNADQSRGSSSSPAGSNKTWKQVWKVRVLPKVKSFVWRLM 170

Query: 417 SQSIPTSDALTKKGCLIDHICIKICGMFEETIEHVLFHCHRAQLVWKFAPIEWDGLLDKS 596
              +PT  AL+KK C+ + +C   C    ET  H+   C  A  +   +P+        +
Sbjct: 171 RNILPTKVALSKKICMEEQLC-PFCRTENETALHLFKECSGAACMLIISPLGLRARNHGA 229

Query: 597 SRFVYW*KIVCGICKDVTSEFRVQLSTYIRWWLWKSWNLWMFQ 725
           +    W   V G+  DV +  +V++   + W LW   N  ++Q
Sbjct: 230 NNMEEW---VVGM-MDVLTTGQVEMFFMLLWALWVERNNMVWQ 268



 Score = 37.7 bits (86), Expect(2) = 9e-15
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +2

Query: 8   GKSIKIWQDLWIPDSMSFKPFPIPFDPSAPVWVCDLFSPGQNNWSMML 151
           G S+ +W D W+P   +FKP+    +    + V DL  P  + W + L
Sbjct: 35  GSSVSVWNDPWLPRPYTFKPYSGVMEGLEDLMVGDLIDPDTSTWMVDL 82


>gb|EMJ08780.1| hypothetical protein PRUPE_ppa018489mg, partial [Prunus persica]
          Length = 1146

 Score = 70.5 bits (171), Expect(2) = 3e-14
 Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
 Frame = +3

Query: 243  KKGEYTIRSSYSDLIQEKIQKFKPAESSSLALNSITFWKRSWKLKVRENIKQFIWRCCSQ 422
            K G+YT++S Y   I           SSS A+NS   WK  W+  +   I+ F+WR  + 
Sbjct: 881  KNGDYTVKSGYYHAINVSPPDPCDRASSSHAVNS-DVWKVIWRAHITPKIRNFMWRALTN 939

Query: 423  SIPTSDALTKKGCLIDHICIKICGMFEETIEHVLFHCHRAQLVWKFAPIEWDGLLDKSSR 602
            SIPT   L  +       C ++CG+F ET+EH+L  C   + VW   P  +   L   + 
Sbjct: 940  SIPTCANLFGRKLARSPTC-RLCGLFPETVEHLLLLCSWTRAVWFGCPFGYAPNLASITT 998

Query: 603  FVYW*K--IVCGICKDVTSEFRVQLSTYIRWWLWKS 704
               W    +          ++ + L  +  W +WK+
Sbjct: 999  LDSWLSSFLRSSFADGDQRDWGISLFMFCSWEIWKA 1034



 Score = 34.7 bits (78), Expect(2) = 3e-14
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +2

Query: 5   DGKSIKIWQDLWIPDSMSFKPFPIP-FDPSAPVWVCDLFSPGQNNWSM 145
           +G+S+ +W+D W+    S K  P+P  +   P+ V DL   G  +W++
Sbjct: 799 NGRSVSVWKDRWLMGYGSGKISPLPSSNRFTPLLVADLIDVGNRSWNI 846


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 76.3 bits (186), Expect(2) = 5e-14
 Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 3/171 (1%)
 Frame = +3

Query: 243  KKGEYTIRSSYSDLIQEKIQKFKPAESSSLALNSITFWKRSWKLKVRENIKQFIWRCCSQ 422
            K G++T+RS+Y     E ++  K   S+S   N +  W++ WK K+   +K F W+    
Sbjct: 1018 KNGQFTVRSAY---YHELLEDRKTGPSTSRGPN-LKLWQKIWKAKIPPKVKLFSWKAIHN 1073

Query: 423  SIPTSDALTKKGCLIDHICIKICGMFEETIEHVLFHCHRAQLVWKFAPIEWDGLLDKSSR 602
             +     + K+G  ID  C + CG  EET EH+++ C  +   W  +P+       ++  
Sbjct: 1074 GLAVYTNMRKRGMNIDGACPR-CGEKEETTEHLIWGCDESSRAWYISPLRIHTGNIEAGS 1132

Query: 603  FVYW*KIVCGICKDVTSEFRVQLSTYIRWW--LWK-SWNLWMFQKVWMPEK 746
            F  W + +    KD              WW   W   WN+W+ +  W+ EK
Sbjct: 1133 FRIWVESLLDTHKDT------------EWWALFWMICWNIWLGRNKWVFEK 1171



 Score = 28.1 bits (61), Expect(2) = 5e-14
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
 Frame = +2

Query: 5    DGKSIKIWQDLWIP--DSMSFKPFPIPFDPSAPVWVCDLFSPGQNNWSMML*LTNFSLRR 178
            DG+   IW D W+P  +  S        +   P  VC+L S   + W++ L  T F    
Sbjct: 937  DGRDTTIWGDPWVPSLERYSIAATEGVSEDDGPQKVCELIS--NDRWNVELLNTLF---- 990

Query: 179  MLHESKALSSVPL 217
               ES A+  +P+
Sbjct: 991  QPWESTAIQRIPV 1003


>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
          Length = 2303

 Score = 71.2 bits (173), Expect(2) = 2e-13
 Identities = 38/109 (34%), Positives = 59/109 (54%)
 Frame = +3

Query: 237  FEKKGEYTIRSSYSDLIQEKIQKFKPAESSSLALNSITFWKRSWKLKVRENIKQFIWRCC 416
            ++K GEY+++S Y   ++ K     P E S+   NS   WK  W +++ E +K F+WR  
Sbjct: 982  YDKHGEYSVKSGYQIALKLKA----PDEPSNSGSNSKR-WKAVWSMELPEKMKIFMWRAA 1036

Query: 417  SQSIPTSDALTKKGCLIDHICIKICGMFEETIEHVLFHCHRAQLVWKFA 563
               +PT++ L K+ CL D IC + C    ET+ H L  C  A+ +W  A
Sbjct: 1037 RNLLPTAENLWKRKCLKDPIC-QGCNREVETVRHALLDCKAARKIWYHA 1084



 Score = 31.2 bits (69), Expect(2) = 2e-13
 Identities = 20/71 (28%), Positives = 36/71 (50%)
 Frame = +2

Query: 5    DGKSIKIWQDLWIPDSMSFKPFPIPFDPSAPVWVCDLFSPGQNNWSMML*LTNFSLRRML 184
            +G +I +++D WIP   +FKP   P  P     V +L    +NNW+    +   +   M 
Sbjct: 905  NGSNILVYKDNWIPRPDTFKPISPPTLP-IDTTVGELMD-DENNWN----VAKLNQHFMQ 958

Query: 185  HESKALSSVPL 217
             +++A+  +PL
Sbjct: 959  EDTEAILKIPL 969


>gb|EMJ20801.1| hypothetical protein PRUPE_ppa023113mg, partial [Prunus persica]
          Length = 851

 Score = 70.5 bits (171), Expect(2) = 3e-13
 Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
 Frame = +3

Query: 243  KKGEYTIRSSYSDLIQEKIQKFKPAESSSLALNSITFWKRSWKLKVRENIKQFIWRCCSQ 422
            K G+YT++S Y   I           SSS A+NS   WK  W+  +   I+ F+WR  + 
Sbjct: 569  KNGDYTVKSGYYHAINVSPPDPCDRASSSHAVNS-DVWKVIWRAHITPKIRNFMWRALTN 627

Query: 423  SIPTSDALTKKGCLIDHICIKICGMFEETIEHVLFHCHRAQLVWKFAPIEWDGLLDKSSR 602
            SIPT   L  +       C ++CG+F ET+EH+L  C   + VW   P  +   L   + 
Sbjct: 628  SIPTCANLFGRKLARSPTC-RLCGLFPETVEHLLLLCSWTRAVWFGCPFGYTPDLASITT 686

Query: 603  FVYW*K--IVCGICKDVTSEFRVQLSTYIRWWLWKS 704
               W    +          ++ + L  +  W +WK+
Sbjct: 687  LDSWLSGFLRSSFADGDQRDWGISLFMFCSWEIWKA 722



 Score = 31.6 bits (70), Expect(2) = 3e-13
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +2

Query: 5   DGKSIKIWQDLWIPDSMSFKPFPIP-FDPSAPVWVCDLFSPGQNNWSMML*LTNFSLRRM 181
           +G  + +W+D W+    S K  P+P  +   P+ V DL   G  +W++        +   
Sbjct: 487 NGHLVSVWKDRWLMGYGSEKISPLPSCNRFTPLLVADLIDVGNRSWNIS------HIEPF 540

Query: 182 LHESKAL 202
           +H S+A+
Sbjct: 541 IHPSEAM 547


>gb|EMJ21280.1| hypothetical protein PRUPE_ppa024663mg [Prunus persica]
          Length = 681

 Score = 73.2 bits (178), Expect(2) = 4e-13
 Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 8/164 (4%)
 Frame = +3

Query: 237 FEKKGEYTIRSSYSDLIQEKIQKFKPAESSSLALNSIT-------FWKRSWKLKVRENIK 395
           +   G YT++S Y         +F   +++++A ++ T        WK  WK++    IK
Sbjct: 389 WNSSGSYTVKSGY--------HRFHARQNTNIASHNHTSHIVSERVWKTIWKVETLPKIK 440

Query: 396 QFIWRCCSQSIPTSDALTKKGCLIDHICIKICGMFEETIEHVLFHCHRAQLVWKFAPIEW 575
            F+WR  S+SI T  AL K     D IC  IC  FEE++EH+LF C   QLVW      W
Sbjct: 441 LFLWRALSRSISTRFALFKIKIATDPIC-PICEGFEESVEHILFLCPGTQLVWISTLDRW 499

Query: 576 -DGLLDKSSRFVYW*KIVCGICKDVTSEFRVQLSTYIRWWLWKS 704
            +G++            + G  +    +F +   +++ W +WK+
Sbjct: 500 LEGIIS-----------IPGTSR-TEGKFLLSFLSFLCWEIWKA 531



 Score = 28.1 bits (61), Expect(2) = 4e-13
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
 Frame = +2

Query: 8   GKSIKIWQDLWIPDSMSFKPFPI----PFDPSAPVWVCDLFSPGQNNWSM 145
           G ++  W D+WIP   S +P P+    P    AP  V +L     + W +
Sbjct: 310 GANMNKWNDVWIP---SCEPGPVQTLLPIPHQAPQLVQELMDKRNHTWKL 356


>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 393

 Score = 80.5 bits (197), Expect = 6e-13
 Identities = 51/181 (28%), Positives = 85/181 (46%)
 Frame = +3

Query: 240 EKKGEYTIRSSYSDLIQEKIQKFKPAESSSLALNSITFWKRSWKLKVRENIKQFIWRCCS 419
           EK G Y+++S+Y   +++ +        ++  L    +W   W+LKV   +K+ +WR C 
Sbjct: 26  EKNGCYSVKSAYRVCVEDVV--------NNAHLRKPGYWSGIWRLKVPPRVKKLVWRVCR 77

Query: 420 QSIPTSDALTKKGCLIDHICIKICGMFEETIEHVLFHCHRAQLVWKFAPIEWDGLLDKSS 599
           +  PT   L  +G      C+K C    E   H+ FHC  A  VW  A + W  +    S
Sbjct: 78  ECFPTRVRLISRGVNCPSACVK-CEDPHEDCYHIFFHCRTAIDVWNTANV-WHLIAPSLS 135

Query: 600 RFVYW*KIVCGICKDVTSEFRVQLSTYIRWWLWKSWNLWMFQKVWMPEKLILGCGKGLMH 779
           +F     I+  + + +++     + T I W +WKS NL ++Q+V      IL   K L+ 
Sbjct: 136 QFDNAPDIIFNLLQKLSASQMESIVT-IMWSIWKSRNLKLWQQVSESSVTILERAKHLLE 194

Query: 780 G 782
           G
Sbjct: 195 G 195


>ref|XP_004288743.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 458

 Score = 74.3 bits (181), Expect(2) = 8e-13
 Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 2/158 (1%)
 Frame = +3

Query: 240 EKKGEYTIRSSYSDLIQEKIQKFKPAESSSLALNSIT--FWKRSWKLKVRENIKQFIWRC 413
           EK GEY +RS Y     +   +  P+  S  + + I    WK  W       +K F+WR 
Sbjct: 111 EKNGEYKVRSGYD---MQHASRNSPSLQSMDSSHIIKPEVWKFIWSSLTLPKVKHFLWRV 167

Query: 414 CSQSIPTSDALTKKGCLIDHICIKICGMFEETIEHVLFHCHRAQLVWKFAPIEWDGLLDK 593
           C+ S+PT   L  K      +C   C ++EE+IEH+L  C     VW   PI +      
Sbjct: 168 CTNSLPTMKNLFSKRIAPSPMC-PFCLLYEESIEHLLLQCSWTAGVWFRLPISYKVDPAL 226

Query: 594 SSRFVYW*KIVCGICKDVTSEFRVQLSTYIRWWLWKSW 707
            + F  W   VCG+ K  +  + + LS ++ + LW  W
Sbjct: 227 ITTFDDWFYGVCGLLKQNSRAWEI-LSCWVSFALWNIW 263



 Score = 26.2 bits (56), Expect(2) = 8e-13
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
 Frame = +2

Query: 5   DGKSIKIWQDLWIPDSMSFKPFPI-----PFDPSAPVWVCDLFSPGQNNWSMML*LTNFS 169
           +G+SI  W+D WIP  +  K          FDP     V DL    Q  W++   + + S
Sbjct: 28  NGESINTWKDRWIPCILGCKLGASYLDAGEFDPYQK--VADLIDWNQYVWNLSPIIHHLS 85

Query: 170 LRRMLHESKALSSVPL 217
                 E  A+ S+P+
Sbjct: 86  ----SEEVTAIRSIPI 97


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score = 72.8 bits (177), Expect(2) = 1e-12
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 6/171 (3%)
 Frame = +3

Query: 237  FEKKGEYTIRSSY-----SDLIQEKIQKFKPAESSSLALNSITFWKRSWKLKVRENIKQF 401
            + +  +YT+RS Y      +L +E+I    P E        +   +  W+LK+   IK F
Sbjct: 1349 YTRNTQYTVRSGYWVATHVNLTEEEI--INPLEGD------VPLKQEIWRLKITPKIKHF 1400

Query: 402  IWRCCSQSIPTSDALTKKGCLIDHICIKICGMFEETIEHVLFHCHRAQLVWKFAPIEWDG 581
            IWRC S ++ T+  L  +    D  C + C   +ETI H++F C  AQ+VW+ A      
Sbjct: 1401 IWRCLSGALSTTTQLRNRNIPADPTCQRCCNA-DETINHIIFTCSYAQVVWRSANFSGSN 1459

Query: 582  LLDKSSRFVYW*KIVCGICKDVTSEFRVQLSTY-IRWWLWKSWNLWMFQKV 731
             L  +       +++    K+        L  + I W LWKS N ++FQ++
Sbjct: 1460 RLCFTDNLEENIRLILQGKKNQNLPILNGLMPFWIMWRLWKSRNEYLFQQL 1510



 Score = 27.3 bits (59), Expect(2) = 1e-12
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +2

Query: 5    DGKSIKIWQDLWIPDSMSFKPFPIPFDPSAPVWVCDLFSPGQNNWSMML 151
            DG++ KIW+D W+P ++  +P   P      + V DL+   +  W  ++
Sbjct: 1272 DGQTTKIWEDPWLP-TLPPRPARGPI-LDEDMKVADLWRENKREWDPVI 1318


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 75.1 bits (183), Expect(2) = 1e-12
 Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 2/167 (1%)
 Frame = +3

Query: 237  FEKKGEYTIRSSYSDLIQEKIQKFKPAESSSLALNSITFWKRS-WKLKVRENIKQFIWRC 413
            F K G YT++S Y         +    E ++L    +T  K   WK++    ++ F+W+ 
Sbjct: 791  FTKAGNYTVKSGYHTA------RLDLNEGTTLIGPDLTTLKAYIWKVQCPPKLRHFLWQI 844

Query: 414  CSQSIPTSDALTKKGCLIDHICIKICGMFEETIEHVLFHCHRAQLVWKFAPIEW-DGLLD 590
             S  +P S+ L K+G L D  C+  CG  EE+I H LF CH A+ +W  + I    G+  
Sbjct: 845  LSGCVPVSENLRKRGILCDKGCVS-CGASEESINHTLFQCHPARQIWALSQIPTAPGIFP 903

Query: 591  KSSRFVYW*KIVCGICKDVTSEFRVQLSTYIRWWLWKSWNLWMFQKV 731
             +S F     +   I   V S        +I W++WK+ N  +F+ V
Sbjct: 904  SNSIFTNLDHLFWRIPSGVDS----APYPWIIWYIWKARNEKVFENV 946



 Score = 25.0 bits (53), Expect(2) = 1e-12
 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 7/55 (12%)
 Frame = +2

Query: 8   GKSIKIWQDLWIPDSMSFKPFPIP-------FDPSAPVWVCDLFSPGQNNWSMML 151
           G SI +W D WIP       FP P        DPS  + V  L     N W++ L
Sbjct: 713 GASISVWNDPWIP-----AQFPRPAKYGGSIVDPS--LKVKSLIDSRSNFWNIDL 760


>gb|EMJ25879.1| hypothetical protein PRUPE_ppa025799mg [Prunus persica]
          Length = 867

 Score = 62.4 bits (150), Expect(2) = 1e-12
 Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
 Frame = +3

Query: 237  FEKKGEYTIRSSYSDLIQEKIQKFKPAESSSLALNSITFWKRSWKLKVRENIKQFIWRCC 416
            +++ G+Y+++S Y     +K Q+    E SS    ++  WK+ W+L+V   IK F+WRC 
Sbjct: 659  YDRSGKYSVKSGYMVACMKK-QRENGMEGSSTQDGTL-LWKKLWRLQVLNKIKFFLWRCI 716

Query: 417  SQSIPTSDALTKKGCLIDHICIKICGMFEETIEHVLFHCHRA--QLVWKFAPIEWDGLLD 590
               +P+   L  +  L   IC + CG   E+I H ++ C+ +  +  W+    +      
Sbjct: 717  WGFLPSRQNLYHRKILNSPICPR-CGKKVESINHAIWACNESANRHEWRITSFK------ 769

Query: 591  KSSRFVYW*KIVCGICKDVTSEFRVQLSTYIRWWLWKSWNLWMFQ 725
                   W  ++      V+S+  V L  ++ W +W   N  +FQ
Sbjct: 770  -----ELWQSVIV-----VSSKEEVDLFAFLCWDIWNDRNNLLFQ 804



 Score = 37.7 bits (86), Expect(2) = 1e-12
 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
 Frame = +2

Query: 5   DGKSIKIWQDLWIPDSMSFKPFPIP-FDPSAPVWVCDLFSPGQNNWSMML*LTNFSLRRM 181
           +G+ I ++QD W+P  M+FK    P FD  A + VC+LF+     W   L   NF     
Sbjct: 582 NGEDIHVYQDRWVPLPMNFKIISAPQFD--ASMKVCELFN-AAGQWDKELLKANF----W 634

Query: 182 LHESKALSSVPL 217
             E KA+  +PL
Sbjct: 635 EQEVKAILQIPL 646


>gb|EPS69206.1| hypothetical protein M569_05560, partial [Genlisea aurea]
          Length = 474

 Score = 59.7 bits (143), Expect(2) = 2e-12
 Identities = 35/114 (30%), Positives = 52/114 (45%)
 Frame = +3

Query: 237 FEKKGEYTIRSSYSDLIQEKIQKFKPAESSSLALNSITFWKRSWKLKVRENIKQFIWRCC 416
           F ++GEY++++ Y  L++   +   P  S S A N I  W+  WKLK+   I  F WR  
Sbjct: 123 FTRQGEYSVKTGYQ-LLKSTSEMNSPGSSRSNA-NKILMWQALWKLKLPMRILTFNWRFG 180

Query: 417 SQSIPTSDALTKKGCLIDHICIKICGMFEETIEHVLFHCHRAQLVWKFAPIEWD 578
              +P  D+L ++    D  C   C    ET  H    C  +Q VW+      D
Sbjct: 181 KHILPLKDSLVRRRIGTDPTC-SACEEDRETWFHAFISCSFSQAVWRLGGFSMD 233



 Score = 39.7 bits (91), Expect(2) = 2e-12
 Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +2

Query: 5   DGKSIKIWQDLWIPDSMSFKP-FPIPFDPSAPVWVCDLFSPGQNNWSM 145
           DG SI +W+D WIPD+ +FKP  P P    A + V +L    Q  W++
Sbjct: 44  DGSSIDVWKDPWIPDTFAFKPSSPAPLG-MANMRVKELIISNQAEWNL 90


>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1094

 Score = 69.7 bits (169), Expect(2) = 3e-12
 Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 2/172 (1%)
 Frame = +3

Query: 249  GEYTIRSSYSDLIQEKIQK--FKPAESSSLALNSITFWKRSWKLKVRENIKQFIWRCCSQ 422
            G YT++S Y DL   ++ K  FK AE    +LN +  + + W L     IK F+W+    
Sbjct: 739  GLYTVKSEY-DLCSRQVHKQMFKEAEEQP-SLNPL--FGKIWNLNSAPKIKVFLWKVLKG 794

Query: 423  SIPTSDALTKKGCLIDHICIKICGMFEETIEHVLFHCHRAQLVWKFAPIEWDGLLDKSSR 602
            ++   D L  +G LI+  C  +C    ET+ H+LF C  A+ VW   P++        S 
Sbjct: 795  AVAVEDRLRTRGVLIEDGC-SMCPEKNETLNHILFQCPLARQVWALTPMQSPNHGFGDSI 853

Query: 603  FVYW*KIVCGICKDVTSEFRVQLSTYIRWWLWKSWNLWMFQKVWMPEKLILG 758
            F     ++        S     +S +I W LWK+ N  +F+ +      I+G
Sbjct: 854  FTNVNHVIGNCHNTELSPHLRYVSPWIIWILWKNRNKRLFEGIGSVSLSIVG 905



 Score = 28.9 bits (63), Expect(2) = 3e-12
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = +2

Query: 5   DGKSIKIWQDLWIPDSMSFKPFPIPFDPSAPVWVCDLFSPGQNNWSM 145
           +G++  +W D WI D    +P  +       + V  L  P   NW++
Sbjct: 657 NGENTYVWMDNWIFDDKPRRPESLQIMVDIQLKVSQLIDPFSRNWNL 703


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1225

 Score = 70.5 bits (171), Expect(2) = 6e-12
 Identities = 47/177 (26%), Positives = 88/177 (49%), Gaps = 4/177 (2%)
 Frame = +3

Query: 237  FEKKGEYTIRSSY---SDLIQEKIQKFKPAESSSLALNSITFWKRSWKLKVRENIKQFIW 407
            F K G YT++S Y    DL +       P +  S++        + WK+K     K F W
Sbjct: 887  FTKSGNYTVKSGYWAARDLSRPTCDL--PFQGPSVS----ALQAQVWKIKTTRKFKHFEW 940

Query: 408  RCCSQSIPTSDALTKKGCLIDHICIKICGMFEETIEHVLFHCHRAQLVWKFAPI-EWDGL 584
            +C S  + T+  L  +    + +C + CG  EE+I H+LF C  ++ +W  +PI   + +
Sbjct: 941  QCLSGCLATNQRLFSRHIGTEKVCPR-CGAEEESINHLLFLCPPSRQIWALSPIPSSEYI 999

Query: 585  LDKSSRFVYW*KIVCGICKDVTSEFRVQLSTYIRWWLWKSWNLWMFQKVWMPEKLIL 755
              ++S F  +  ++    +   +E  +++  +I W++WKS N ++F+ V    ++IL
Sbjct: 1000 FPRNSLFYNFDFLLSRGKEFDIAEDIMEIFPWILWYIWKSRNRFIFENVIESPQVIL 1056



 Score = 26.9 bits (58), Expect(2) = 6e-12
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
 Frame = +2

Query: 8   GKSIKIWQDLWIPDSMSFKPFP---IPFDPSAPVWVCDLFSPGQNNWSM 145
           G   ++W+D WIP   SF P P   I       ++V DL  P    W +
Sbjct: 809 GMLTRVWEDPWIP---SFPPRPAKSILNIRDTHLYVNDLIDPVTKQWKL 854


>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X2 [Citrus sinensis]
          Length = 765

 Score = 76.6 bits (187), Expect = 9e-12
 Identities = 50/163 (30%), Positives = 81/163 (49%)
 Frame = +3

Query: 237 FEKKGEYTIRSSYSDLIQEKIQKFKPAESSSLALNSITFWKRSWKLKVRENIKQFIWRCC 416
           ++KKG Y+++S Y   +Q    KF    SSS   N+   W   W L++ E +K F+WR  
Sbjct: 416 YDKKGNYSVKSGYQLALQ---MKFPNRPSSSKEDNNS--WNSIWYLQIPEKVKIFMWRAT 470

Query: 417 SQSIPTSDALTKKGCLIDHICIKICGMFEETIEHVLFHCHRAQLVWKFAPIEWDGLLDKS 596
           +  +PTS+ L K+  L    C + C    ETI H LF C  ++ +WK    E +    K 
Sbjct: 471 NDLLPTSENLWKRRILQTPWCQR-CRSHRETIFHSLFDCKASRKIWKLTTFEEEVKALKC 529

Query: 597 SRFVYW*KIVCGICKDVTSEFRVQLSTYIRWWLWKSWNLWMFQ 725
              +    ++  +  D  S+  ++L   + W +W S NL++FQ
Sbjct: 530 KDVL---SLLLALA-DRRSKTEMELIVAVCWSIWHSRNLFIFQ 568


>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
            [Citrus sinensis]
          Length = 968

 Score = 76.6 bits (187), Expect = 9e-12
 Identities = 50/163 (30%), Positives = 81/163 (49%)
 Frame = +3

Query: 237  FEKKGEYTIRSSYSDLIQEKIQKFKPAESSSLALNSITFWKRSWKLKVRENIKQFIWRCC 416
            ++KKG Y+++S Y   +Q    KF    SSS   N+   W   W L++ E +K F+WR  
Sbjct: 619  YDKKGNYSVKSGYQLALQ---MKFPNRPSSSKEDNNS--WNSIWYLQIPEKVKIFMWRAT 673

Query: 417  SQSIPTSDALTKKGCLIDHICIKICGMFEETIEHVLFHCHRAQLVWKFAPIEWDGLLDKS 596
            +  +PTS+ L K+  L    C + C    ETI H LF C  ++ +WK    E +    K 
Sbjct: 674  NDLLPTSENLWKRRILQTPWCQR-CRSHRETIFHSLFDCKASRKIWKLTTFEEEVKALKC 732

Query: 597  SRFVYW*KIVCGICKDVTSEFRVQLSTYIRWWLWKSWNLWMFQ 725
               +    ++  +  D  S+  ++L   + W +W S NL++FQ
Sbjct: 733  KDVL---SLLLALA-DRRSKTEMELIVAVCWSIWHSRNLFIFQ 771


>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 769

 Score = 76.6 bits (187), Expect = 9e-12
 Identities = 50/163 (30%), Positives = 81/163 (49%)
 Frame = +3

Query: 237 FEKKGEYTIRSSYSDLIQEKIQKFKPAESSSLALNSITFWKRSWKLKVRENIKQFIWRCC 416
           ++KKG Y+++S Y   +Q    KF    SSS   N+   W   W L++ E +K F+WR  
Sbjct: 416 YDKKGNYSVKSGYQLALQ---MKFPNRPSSSKEDNNS--WNSIWYLQIPEKVKIFMWRAT 470

Query: 417 SQSIPTSDALTKKGCLIDHICIKICGMFEETIEHVLFHCHRAQLVWKFAPIEWDGLLDKS 596
           +  +PTS+ L K+  L    C + C    ETI H LF C  ++ +WK    E +    K 
Sbjct: 471 NDLLPTSENLWKRRILQTPWCQR-CRSHRETIFHSLFDCKASRKIWKLTTFEEEVKALKC 529

Query: 597 SRFVYW*KIVCGICKDVTSEFRVQLSTYIRWWLWKSWNLWMFQ 725
              +    ++  +  D  S+  ++L   + W +W S NL++FQ
Sbjct: 530 KDVL---SLLLALA-DRRSKTEMELIVAVCWSIWHSRNLFIFQ 568


>ref|NP_194638.1| ribonuclease H-like protein [Arabidopsis thaliana]
           gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis
           thaliana] gi|7269807|emb|CAB79667.1| putative protein
           [Arabidopsis thaliana] gi|67633766|gb|AAY78807.1|
           putative reverse transcriptase/RNA-dependent DNA
           polymerase [Arabidopsis thaliana]
           gi|332660185|gb|AEE85585.1| ribonuclease H-like protein
           [Arabidopsis thaliana]
          Length = 575

 Score = 76.6 bits (187), Expect = 9e-12
 Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 7/170 (4%)
 Frame = +3

Query: 237 FEKKGEYTIRSSYSDLIQEKIQKFKPAESSSLALNSITFWKRSWKLKVRENIKQFIWRCC 416
           +   G+YT++S Y  L Q   ++  P E S  +LN I  +++ WK +    I+ F+W+C 
Sbjct: 217 YTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNPI--YQKIWKSQTSPKIQHFLWKCL 274

Query: 417 SQSIPTSDALTKKGCLIDHICIKICGMFEETIEHVLFHCHRAQLVWKFAPI------EWD 578
           S S+P + AL  +    +  CI+ C   +ET+ H+LF C  A+L W  + I      EW 
Sbjct: 275 SNSLPVAGALAYRHLSKESACIR-CPSCKETVNHLLFKCTFARLTWAISSIPIPLGGEW- 332

Query: 579 GLLDKSSRFVYW*KIVCGICK-DVTSEFRVQLSTYIRWWLWKSWNLWMFQ 725
              D     +YW   V  +   +   E   QL  ++ W LWK+ N  +F+
Sbjct: 333 --ADSIYVNLYW---VFNLGNGNPQWEKASQLVPWLLWRLWKNRNELVFR 377