BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00026810
         (699 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614...   271   1e-81
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...   252   1e-79
ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607...   264   2e-79
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             253   2e-78
ref|XP_006488688.1| PREDICTED: uncharacterized protein LOC102623...   259   6e-77
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             258   4e-75
gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsi...   251   4e-74
ref|XP_006495009.1| PREDICTED: uncharacterized protein LOC102608...   243   6e-73
ref|XP_003633313.1| PREDICTED: uncharacterized protein LOC100854...   238   5e-72
emb|CAN71052.1| hypothetical protein VITISV_003719 [Vitis vinifera]   233   1e-69
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]               234   5e-69
dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]                   238   5e-69
ref|XP_003633709.1| PREDICTED: uncharacterized protein LOC100853...   222   2e-67
gb|AFU25705.1| gag-pol precursor [Castanea mollissima]                230   2e-67
ref|XP_006464891.1| PREDICTED: uncharacterized protein LOC102626...   260   3e-67
emb|CAN69925.1| hypothetical protein VITISV_027208 [Vitis vinifera]   240   5e-67
emb|CAN71857.1| hypothetical protein VITISV_012968 [Vitis vinifera]   227   1e-66
emb|CAN71502.1| hypothetical protein VITISV_021013 [Vitis vinifera]   239   2e-66
gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsi...   257   2e-66
gb|ABD63139.1| Reverse transcriptase family protein [Asparagus o...   218   4e-66

>ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614166 [Citrus sinensis]
          Length = 1089

 Score =  271 bits (693), Expect(2) = 1e-81
 Identities = 123/178 (69%), Positives = 150/178 (84%)
 Frame = -1

Query: 534  LIDNQFIREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATA 355
            L+   FIREA YP W++N VLVKK+NG+WR+CVDFTDLNKACPKDS+PLP ID +VD+TA
Sbjct: 715  LLKAGFIREAKYPEWISNVVLVKKANGKWRMCVDFTDLNKACPKDSFPLPKIDQLVDSTA 774

Query: 354  GHELMSFMDAYSGYNQIRMHPEDEENTSFFSARGIYCYKMMPFGLKNAGATYQRLVNKMF 175
            GH L+SFMDA+SGYNQI M+ +DEENT+F +  G++CY+MMPFGLKNAGATYQRLVNK+F
Sbjct: 775  GHGLLSFMDAFSGYNQIPMNEQDEENTTFITNMGLFCYRMMPFGLKNAGATYQRLVNKIF 834

Query: 174  EKMIGHTMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYKMMLNPRKCTFGVGSGKFL 1
            + +IGHTMEVYVDDM+ KS    DH+  L + F +LR+Y+M LNP KC FGVGSGKFL
Sbjct: 835  KPLIGHTMEVYVDDMITKSREPRDHVKHLEETFELLRKYEMKLNPEKCAFGVGSGKFL 892



 Score = 59.3 bits (142), Expect(2) = 1e-81
 Identities = 28/57 (49%), Positives = 38/57 (66%)
 Frame = -3

Query: 697 EPYRSELIEFLGNNLDVFAWTHADMPGIDPKHACHRLNIDLTFRPVIQKRRKLGPDR 527
           E  ++EL++ L ++ DVFAW+H DMPGID   ACH+L +    RPV QKRR    +R
Sbjct: 648 EAIKAELVKCLQSHADVFAWSHEDMPGIDRGIACHKLAVKRGARPVRQKRRCFNHER 704


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score =  252 bits (644), Expect(2) = 1e-79
 Identities = 116/178 (65%), Positives = 140/178 (78%)
 Frame = -1

Query: 534  LIDNQFIREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATA 355
            L+D   I E  YP W+ NPV+VKK NG+WR+C+DFTDLNKACPKDS+PLP+ID +V+ATA
Sbjct: 805  LLDAGSIVEVRYPDWLRNPVVVKKKNGKWRVCIDFTDLNKACPKDSFPLPHIDRLVEATA 864

Query: 354  GHELMSFMDAYSGYNQIRMHPEDEENTSFFSARGIYCYKMMPFGLKNAGATYQRLVNKMF 175
            G+EL+SFMDA+SGYNQI MH  D E T F + +G YCYK+MPFGLKNAGATY RLVN+MF
Sbjct: 865  GNELLSFMDAFSGYNQILMHQNDREKTVFITDQGTYCYKVMPFGLKNAGATYPRLVNQMF 924

Query: 174  EKMIGHTMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYKMMLNPRKCTFGVGSGKFL 1
               + H+MEVY+DDMLVKSL   +H+  L + F VL  Y M LNP KCTFGV SG+FL
Sbjct: 925  TDQLDHSMEVYIDDMLVKSLRAEEHITHLRQCFQVLNRYNMKLNPSKCTFGVTSGEFL 982



 Score = 71.2 bits (173), Expect(2) = 1e-79
 Identities = 31/54 (57%), Positives = 39/54 (72%)
 Frame = -3

Query: 688 RSELIEFLGNNLDVFAWTHADMPGIDPKHACHRLNIDLTFRPVIQKRRKLGPDR 527
           ++EL+ FL  N   FAW+  DMPGID    CH LN+D T++P+ QKRRKLGPDR
Sbjct: 741 QNELVNFLRQNAATFAWSVEDMPGIDSAVTCHELNVDPTYKPLKQKRRKLGPDR 794


>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
          Length = 1866

 Score =  264 bits (675), Expect(2) = 2e-79
 Identities = 120/178 (67%), Positives = 147/178 (82%)
 Frame = -1

Query: 534  LIDNQFIREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATA 355
            L+   FIREA YP W++N VLVKK+NG+WR+CVDFTDLNKACPKDS+PLP ID +VD+TA
Sbjct: 882  LLKAGFIREAKYPEWISNVVLVKKANGKWRMCVDFTDLNKACPKDSFPLPKIDQLVDSTA 941

Query: 354  GHELMSFMDAYSGYNQIRMHPEDEENTSFFSARGIYCYKMMPFGLKNAGATYQRLVNKMF 175
            GH L+SFMDA+SGYNQI M+ +DEE+T+F +  G++CY++MPFGLKNAGATYQRLVNK+F
Sbjct: 942  GHSLLSFMDAFSGYNQIPMNEQDEESTTFITNMGLFCYRVMPFGLKNAGATYQRLVNKVF 1001

Query: 174  EKMIGHTMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYKMMLNPRKCTFGVGSGKFL 1
            + +IG TMEVYVDDM+ KS    DH+  L + F +LR YKM LNP KC FGV SGKFL
Sbjct: 1002 KPLIGRTMEVYVDDMITKSREPRDHVKHLEETFELLRRYKMKLNPEKCAFGVSSGKFL 1059



 Score = 58.5 bits (140), Expect(2) = 2e-79
 Identities = 27/57 (47%), Positives = 37/57 (64%)
 Frame = -3

Query: 697 EPYRSELIEFLGNNLDVFAWTHADMPGIDPKHACHRLNIDLTFRPVIQKRRKLGPDR 527
           E  + EL++ L ++ D+FAW+H DMPGID   ACH+L +    RPV QKRR    +R
Sbjct: 815 EAIKGELVKCLQSHADIFAWSHEDMPGIDRGIACHKLAVKRGARPVRQKRRCFNHER 871


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  253 bits (646), Expect(2) = 2e-78
 Identities = 118/172 (68%), Positives = 139/172 (80%)
 Frame = -1

Query: 516  IREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATAGHELMS 337
            I E  YP W+ANPV+VKK NG+WR+CVD+TDLNKACPKDSYPLP+ID +V+AT+G+ L+S
Sbjct: 853  IIEVKYPEWLANPVVVKKKNGKWRVCVDYTDLNKACPKDSYPLPHIDRLVEATSGNGLLS 912

Query: 336  FMDAYSGYNQIRMHPEDEENTSFFSARGIYCYKMMPFGLKNAGATYQRLVNKMFEKMIGH 157
            FMDA+SGYNQI MH +D+E TSF + RG YCYK+M FGLKNAGATYQR VNKM    IG 
Sbjct: 913  FMDAFSGYNQILMHKDDQEKTSFVTDRGTYCYKVMSFGLKNAGATYQRFVNKMLADQIGR 972

Query: 156  TMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYKMMLNPRKCTFGVGSGKFL 1
            T+EVY+DDMLVKSL   DH+  L+K F VL  Y M LNP KCTFGV SG+FL
Sbjct: 973  TVEVYIDDMLVKSLKPEDHVEHLSKCFDVLNTYGMKLNPTKCTFGVTSGEFL 1024



 Score = 66.6 bits (161), Expect(2) = 2e-78
 Identities = 32/54 (59%), Positives = 36/54 (66%)
 Frame = -3

Query: 688 RSELIEFLGNNLDVFAWTHADMPGIDPKHACHRLNIDLTFRPVIQKRRKLGPDR 527
           R ELI  L  N   FAW+  DM GIDP    H LN+D TF+PV QKRRKLGP+R
Sbjct: 783 RLELIALLKRNSKTFAWSIEDMKGIDPAITAHELNVDPTFKPVKQKRRKLGPER 836


>ref|XP_006488688.1| PREDICTED: uncharacterized protein LOC102623105 [Citrus sinensis]
          Length = 1407

 Score =  259 bits (663), Expect(2) = 6e-77
 Identities = 117/173 (67%), Positives = 145/173 (83%)
 Frame = -1

Query: 519  FIREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATAGHELM 340
            FIRE  YP W++N VLVKK+NG+WR+CVDFTDLNKACPKDS+PLP ID +VD+TAGH L+
Sbjct: 900  FIREVNYPEWISNVVLVKKANGKWRMCVDFTDLNKACPKDSFPLPKIDQLVDSTAGHGLL 959

Query: 339  SFMDAYSGYNQIRMHPEDEENTSFFSARGIYCYKMMPFGLKNAGATYQRLVNKMFEKMIG 160
            SFMDA+SGYNQI M+  DEE+T+F + +G++CY++MPFGLKNAGATYQRLVNK+F+ +IG
Sbjct: 960  SFMDAFSGYNQIPMYEPDEESTAFITNQGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIG 1019

Query: 159  HTMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYKMMLNPRKCTFGVGSGKFL 1
             TMEVYVDDM+ KS    +H+  L + F +LR+YKM LNP KC FGV SGKFL
Sbjct: 1020 KTMEVYVDDMITKSKVPKEHVRHLEETFELLRKYKMKLNPEKCAFGVESGKFL 1072



 Score = 55.1 bits (131), Expect(2) = 6e-77
 Identities = 29/55 (52%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = -3

Query: 688 RSELIEFLGN-NLDVFAWTHADMPGIDPKHACHRLNIDLTFRPVIQKRRKLGPDR 527
           R E +E L   + DVFAWTH DMPGIDP+ ACH+L +    R V QKRR    +R
Sbjct: 830 RQEPVEDLETAHADVFAWTHEDMPGIDPEVACHKLAMKKGARAVRQKRRCFNQER 884


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  258 bits (659), Expect(2) = 4e-75
 Identities = 119/172 (69%), Positives = 144/172 (83%)
 Frame = -1

Query: 516 IREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATAGHELMS 337
           IRE  YP WVAN V+VKK NG+ R+C+DFTDLNKACPKDS+PLP+ID +V++TAG+EL++
Sbjct: 50  IREVQYPEWVANTVVVKKKNGKDRVCIDFTDLNKACPKDSFPLPHIDRLVESTAGNELLT 109

Query: 336 FMDAYSGYNQIRMHPEDEENTSFFSARGIYCYKMMPFGLKNAGATYQRLVNKMFEKMIGH 157
           FMDA+SG NQI M+PED+E TSF + RGIYCYK+MPFGLKNAGATYQRLVNKMF   +G 
Sbjct: 110 FMDAFSGSNQIMMNPEDQEKTSFITDRGIYCYKVMPFGLKNAGATYQRLVNKMFHNHLGK 169

Query: 156 TMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYKMMLNPRKCTFGVGSGKFL 1
           TMEVY+DDMLVKSL   DH+  L + F +L +Y+M LNP KCTFGV SG+FL
Sbjct: 170 TMEVYIDDMLVKSLKKEDHVKHLEECFGILNKYQMKLNPAKCTFGVPSGEFL 221



 Score = 50.4 bits (119), Expect(2) = 4e-75
 Identities = 22/36 (61%), Positives = 27/36 (75%)
 Frame = -3

Query: 625 MPGIDPKHACHRLNIDLTFRPVIQKRRKLGPDRQSI 518
           MPGI+P   CH LN+D +F+PV QKRRKLG +R  I
Sbjct: 1   MPGINPSIICHELNVDPSFKPVKQKRRKLGVERAKI 36


>gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 764

 Score =  251 bits (642), Expect(2) = 4e-74
 Identities = 116/178 (65%), Positives = 139/178 (78%)
 Frame = -1

Query: 534  LIDNQFIREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATA 355
            L+D   I E  YP W+ANPV+VKK N +WR+C+DFTDLNKACPKDS+PLP+ID MV+AT 
Sbjct: 520  LLDAGSIVEVKYPEWLANPVVVKKKNDKWRVCIDFTDLNKACPKDSFPLPHIDRMVEATT 579

Query: 354  GHELMSFMDAYSGYNQIRMHPEDEENTSFFSARGIYCYKMMPFGLKNAGATYQRLVNKMF 175
            G+EL+SFMDA+SGYNQI MH +D+E TSF   RG YCYK+MPFGLKN GA YQRLVN+MF
Sbjct: 580  GNELLSFMDAFSGYNQIPMHKDDQEKTSFIIDRGTYCYKVMPFGLKNVGARYQRLVNQMF 639

Query: 174  EKMIGHTMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYKMMLNPRKCTFGVGSGKFL 1
               +G TMEVY+DDMLVKS   +DH++ L   F  L +Y M LNP KC FGV SG+FL
Sbjct: 640  APQLGKTMEVYIDDMLVKSTRSADHIDHLKACFETLNKYNMKLNPAKCLFGVTSGEFL 697



 Score = 53.5 bits (127), Expect(2) = 4e-74
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = -3

Query: 628 DMPGIDPKHACHRLNIDLTFRPVIQKRRKLGPDR 527
           DM GIDP+ ACH LN+D TF+ V QKRRKLGP+R
Sbjct: 476 DMVGIDPEVACHELNVDPTFKLVKQKRRKLGPER 509


>ref|XP_006495009.1| PREDICTED: uncharacterized protein LOC102608416 [Citrus sinensis]
          Length = 1313

 Score =  243 bits (619), Expect(2) = 6e-73
 Identities = 113/178 (63%), Positives = 141/178 (79%)
 Frame = -1

Query: 534  LIDNQFIREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATA 355
            L+   FIREA YP W++N VLVKK+NG+WR+CVDFTDLNKACPKDS+PL  ID +VD+TA
Sbjct: 727  LLKAGFIREAKYPEWISNVVLVKKANGKWRMCVDFTDLNKACPKDSFPLQKIDQLVDSTA 786

Query: 354  GHELMSFMDAYSGYNQIRMHPEDEENTSFFSARGIYCYKMMPFGLKNAGATYQRLVNKMF 175
            GH L+SFMDA+SGYNQI M+ +DEE+T+F +  G++CY++MPFGLKNAGATYQRLVNK+F
Sbjct: 787  GHSLLSFMDAFSGYNQIPMNEQDEESTTFITNMGLFCYRVMPFGLKNAGATYQRLVNKVF 846

Query: 174  EKMIGHTMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYKMMLNPRKCTFGVGSGKFL 1
            + +IGHTMEVYVDDM+ KS    DH+  L + F +          +KC FGVGSGKFL
Sbjct: 847  KPLIGHTMEVYVDDMITKSREPRDHVKHLEETFEL----------QKCAFGVGSGKFL 894



 Score = 58.5 bits (140), Expect(2) = 6e-73
 Identities = 25/48 (52%), Positives = 36/48 (75%)
 Frame = -3

Query: 688 RSELIEFLGNNLDVFAWTHADMPGIDPKHACHRLNIDLTFRPVIQKRR 545
           ++EL++ L ++ D+FAW+H DMPGID + ACH+L +    RPV QKRR
Sbjct: 663 KTELVKCLQSHADIFAWSHEDMPGIDRRIACHKLAVKKGARPVRQKRR 710


>ref|XP_003633313.1| PREDICTED: uncharacterized protein LOC100854367 [Vitis vinifera]
          Length = 955

 Score =  238 bits (607), Expect(2) = 5e-72
 Identities = 106/173 (61%), Positives = 137/173 (79%)
 Frame = -1

Query: 519  FIREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATAGHELM 340
            FIRE  YP W+AN V+V K  G+WR+CVD+T+LN AC KDS+PLP ID +VDATAGHE++
Sbjct: 617  FIREVEYPEWLANAVVVPKKGGKWRVCVDYTNLNNACSKDSFPLPRIDQIVDATAGHEVL 676

Query: 339  SFMDAYSGYNQIRMHPEDEENTSFFSARGIYCYKMMPFGLKNAGATYQRLVNKMFEKMIG 160
            SF+DA+SGY+QI M PEDEE T+F +  G+YCYK+MPFGLKNAGATYQ+L+ K+F+ +IG
Sbjct: 677  SFLDAFSGYHQIPMAPEDEEKTTFITPHGLYCYKVMPFGLKNAGATYQKLMTKIFKPLIG 736

Query: 159  HTMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYKMMLNPRKCTFGVGSGKFL 1
              +EVY+DD++VKS   ++H   L K+F +LR+Y M  NP KC FGV  GKFL
Sbjct: 737  DIIEVYIDDVVVKSKTRNEHAQHLQKVFHLLRQYDMKFNPTKCAFGVSLGKFL 789



 Score = 60.1 bits (144), Expect(2) = 5e-72
 Identities = 29/57 (50%), Positives = 36/57 (63%)
 Frame = -3

Query: 688 RSELIEFLGNNLDVFAWTHADMPGIDPKHACHRLNIDLTFRPVIQKRRKLGPDRQSI 518
           R EL   L  N D+FAWTH DM GI P  A HRLNI  + +PV QK ++  PD+Q +
Sbjct: 548 REELQNVLQQNRDIFAWTHFDMTGIHPTIASHRLNILASSKPVQQKVQRFHPDKQKV 604


>emb|CAN71052.1| hypothetical protein VITISV_003719 [Vitis vinifera]
          Length = 944

 Score =  233 bits (593), Expect(2) = 1e-69
 Identities = 103/178 (57%), Positives = 140/178 (78%)
 Frame = -1

Query: 534 LIDNQFIREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATA 355
           L++  FIRE  YP W+AN V+V K  G+WR+CVD+T+LN ACPKDS+PLP ID +VD+T+
Sbjct: 70  LLEAGFIREVSYPDWLANVVVVPKKEGKWRVCVDYTNLNNACPKDSFPLPRIDQIVDSTS 129

Query: 354 GHELMSFMDAYSGYNQIRMHPEDEENTSFFSARGIYCYKMMPFGLKNAGATYQRLVNKMF 175
           G  ++SF+DA+SGY+QI M P+DEE T+F +   +YCYK+MPFGLKNAGATYQRL+ K+F
Sbjct: 130 GQGMLSFLDAFSGYHQIPMSPDDEEKTAFITPHXLYCYKVMPFGLKNAGATYQRLMTKIF 189

Query: 174 EKMIGHTMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYKMMLNPRKCTFGVGSGKFL 1
           + +IG ++EVY+DD++VKS     H+  L ++F +LR+Y M LNP KC FGV +GKFL
Sbjct: 190 KPLIGRSVEVYIDDIVVKSKTREQHILHLQEVFYLLRKYDMKLNPSKCAFGVSAGKFL 247



 Score = 57.8 bits (138), Expect(2) = 1e-69
 Identities = 26/48 (54%), Positives = 33/48 (68%)
 Frame = -3

Query: 667 LGNNLDVFAWTHADMPGIDPKHACHRLNIDLTFRPVIQKRRKLGPDRQ 524
           L +N D+FAWTH+DM GI P  A H+LN+    RP+ QK R+  PDRQ
Sbjct: 13  LRSNHDIFAWTHSDMKGIHPSIASHKLNVFPAARPIRQKIRRFHPDRQ 60


>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score =  234 bits (596), Expect(2) = 5e-69
 Identities = 107/178 (60%), Positives = 139/178 (78%)
 Frame = -1

Query: 534  LIDNQFIREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATA 355
            LI   FI++A Y  W+AN V+VKK+NG+WR+CVD+TDLNKACPKDSYPLP ID +VD  A
Sbjct: 924  LIQAGFIQKAHYTTWLANVVMVKKTNGKWRMCVDYTDLNKACPKDSYPLPTIDRLVDGAA 983

Query: 354  GHELMSFMDAYSGYNQIRMHPEDEENTSFFSARGIYCYKMMPFGLKNAGATYQRLVNKMF 175
            GH+++SF+DAYSGYNQI+M+  D E T+F +    + Y++MPFGLKNAGATYQRL++ +F
Sbjct: 984  GHQILSFLDAYSGYNQIQMYHRDREKTAFRTDSDNFFYEVMPFGLKNAGATYQRLMDHVF 1043

Query: 174  EKMIGHTMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYKMMLNPRKCTFGVGSGKFL 1
              MIG  +EVYVDD++VKS     H++DL ++F  LR+Y+M LNP KC FGV  GKFL
Sbjct: 1044 HDMIGRNVEVYVDDIVVKSDSCEQHVSDLKEVFQALRQYRMRLNPEKCAFGVEGGKFL 1101



 Score = 54.3 bits (129), Expect(2) = 5e-69
 Identities = 25/55 (45%), Positives = 35/55 (63%)
 Frame = -3

Query: 688  RSELIEFLGNNLDVFAWTHADMPGIDPKHACHRLNIDLTFRPVIQKRRKLGPDRQ 524
            R  + + L  N D+FAWT ADMPG+      HRL++    RP+ QK+RKLG +R+
Sbjct: 860  RETIGKTLTKNADLFAWTAADMPGVKSDVITHRLSVYTEARPIAQKKRKLGEERR 914


>dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]
          Length = 1542

 Score =  238 bits (607), Expect(2) = 5e-69
 Identities = 110/178 (61%), Positives = 140/178 (78%)
 Frame = -1

Query: 534  LIDNQFIREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATA 355
            L+   FIR+  Y  W++N +LVKK++   R+CVDFTDLNKACPKDS+PL  ID +VD+TA
Sbjct: 805  LLKAGFIRKTKYSEWISNVILVKKAS---RMCVDFTDLNKACPKDSFPLQKIDQLVDSTA 861

Query: 354  GHELMSFMDAYSGYNQIRMHPEDEENTSFFSARGIYCYKMMPFGLKNAGATYQRLVNKMF 175
            GH L+SFMD +SGYNQI M  +DEE+T+F +  G++CY++MPFGLKN GATYQRLVNK+F
Sbjct: 862  GHSLLSFMDTFSGYNQIPMDEQDEESTTFITNIGLFCYRVMPFGLKNTGATYQRLVNKIF 921

Query: 174  EKMIGHTMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYKMMLNPRKCTFGVGSGKFL 1
            + +IGHTMEVYVDDM+ KS    DH+  L + F +LR+Y+M LNP KC FGV SGKFL
Sbjct: 922  KPLIGHTMEVYVDDMITKSKKPKDHVKHLEETFELLRKYEMKLNPEKCAFGVSSGKFL 979



 Score = 50.1 bits (118), Expect(2) = 5e-69
 Identities = 25/57 (43%), Positives = 34/57 (59%)
 Frame = -3

Query: 697 EPYRSELIEFLGNNLDVFAWTHADMPGIDPKHACHRLNIDLTFRPVIQKRRKLGPDR 527
           E  + EL+++L +  D+FAW+H DMP ID   A H+L I     PV QKRR    +R
Sbjct: 738 ETIKGELVKYLQSYADIFAWSHEDMPRIDHGIAYHKLAIRKGAMPVRQKRRCFNQER 794


>ref|XP_003633709.1| PREDICTED: uncharacterized protein LOC100853021 [Vitis vinifera]
          Length = 587

 Score =  222 bits (565), Expect(2) = 2e-67
 Identities = 97/178 (54%), Positives = 135/178 (75%)
 Frame = -1

Query: 534 LIDNQFIREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATA 355
           L+D +FIRE  YP W+ N V+V K  G+WR+CVD+T+LN ACPKDS+PL  I+ +VD+  
Sbjct: 339 LLDVRFIREVEYPEWLTNVVVVPKKEGRWRVCVDYTNLNNACPKDSFPLSQINQIVDSIV 398

Query: 354 GHELMSFMDAYSGYNQIRMHPEDEENTSFFSARGIYCYKMMPFGLKNAGATYQRLVNKMF 175
           GH ++SF+DA+SGY+QI M P D+E T+F +  G+YCYK+M FGLKN GATYQRL+ K+F
Sbjct: 399 GHGMLSFLDAFSGYHQIPMAPADKEKTAFITPHGLYCYKVMSFGLKNTGATYQRLMTKIF 458

Query: 174 EKMIGHTMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYKMMLNPRKCTFGVGSGKFL 1
           + +IG  +EVY+DD++VK+    +H + L ++F +LR Y M LNP KC FGV +GKF+
Sbjct: 459 KPLIGRMVEVYIDDIVVKNKTREEHTHHLQEVFHLLRRYDMRLNPSKCAFGVSAGKFV 516



 Score = 61.2 bits (147), Expect(2) = 2e-67
 Identities = 30/52 (57%), Positives = 34/52 (65%)
 Frame = -3

Query: 673 EFLGNNLDVFAWTHADMPGIDPKHACHRLNIDLTFRPVIQKRRKLGPDRQSI 518
           E    N DVFAW H+DMPGI P  A HRLNI  + RPV +K R+  PDRQ I
Sbjct: 280 ETFQQNQDVFAWAHSDMPGIHPSTASHRLNILPSSRPVRRKVRRFHPDRQKI 331


>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
          Length = 1106

 Score =  230 bits (586), Expect(2) = 2e-67
 Identities = 102/172 (59%), Positives = 134/172 (77%)
 Frame = -1

Query: 516 IREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATAGHELMS 337
           I+E  YP W+AN V+VKK NG+WR+CVDFTDLNKACPKD +P+P ID +VDAT  H  MS
Sbjct: 122 IKEIFYPEWLANTVVVKKKNGKWRVCVDFTDLNKACPKDPFPIPRIDQLVDATVRHPRMS 181

Query: 336 FMDAYSGYNQIRMHPEDEENTSFFSARGIYCYKMMPFGLKNAGATYQRLVNKMFEKMIGH 157
           F+DA+  Y+QI M   D+E T+F +  G Y Y++MPFGLKNAG+TYQR+V +MF+  +G 
Sbjct: 182 FLDAFQNYHQIPMSLNDQEKTAFRTPNGNYHYRVMPFGLKNAGSTYQRMVTRMFDSQLGR 241

Query: 156 TMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYKMMLNPRKCTFGVGSGKFL 1
           TME Y+DDM++KS  + DHL DL++ F+VLR++K+ LN  KC+FGV SGKFL
Sbjct: 242 TMEAYIDDMVIKSKKVGDHLKDLHETFSVLRKHKLRLNASKCSFGVDSGKFL 293



 Score = 52.8 bits (125), Expect(2) = 2e-67
 Identities = 23/48 (47%), Positives = 31/48 (64%)
 Frame = -3

Query: 688 RSELIEFLGNNLDVFAWTHADMPGIDPKHACHRLNIDLTFRPVIQKRR 545
           R E+++FL +N+DVFAWT  D+ GIDP+  CH LN+     P  Q  R
Sbjct: 52  REEVVQFLQDNIDVFAWTTYDVSGIDPEFICHHLNVSHNAMPRKQPPR 99


>ref|XP_006464891.1| PREDICTED: uncharacterized protein LOC102626228 [Citrus sinensis]
          Length = 1189

 Score =  260 bits (665), Expect = 3e-67
 Identities = 119/183 (65%), Positives = 148/183 (80%)
 Frame = -1

Query: 549  GANSALIDNQFIREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYM 370
            G    L+   FIRE  YP W++N VLVKK+NG+WR+CVDFTDLNKACPKDS+PLP ID +
Sbjct: 812  GEVEKLLRAGFIREVSYPEWISNVVLVKKANGKWRMCVDFTDLNKACPKDSFPLPKIDQL 871

Query: 369  VDATAGHELMSFMDAYSGYNQIRMHPEDEENTSFFSARGIYCYKMMPFGLKNAGATYQRL 190
            VD+TAGH L+SFMDA+SGYNQI M+  DEE+T+F + +G++CY++MPFGLKNAGATYQRL
Sbjct: 872  VDSTAGHGLLSFMDAFSGYNQIPMYEPDEESTAFITNQGLFCYRVMPFGLKNAGATYQRL 931

Query: 189  VNKMFEKMIGHTMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYKMMLNPRKCTFGVGSG 10
            VNK+F+ +IG TMEVYVDDM+ KS    +H+  L + F +LR+YKM LNP KC FGV SG
Sbjct: 932  VNKVFKPLIGKTMEVYVDDMITKSKVPKEHVRHLEETFELLRKYKMKLNPEKCAFGVESG 991

Query: 9    KFL 1
            KFL
Sbjct: 992  KFL 994



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 31/60 (51%), Positives = 37/60 (61%)
 Frame = -3

Query: 688 RSELIEFLGNNLDVFAWTHADMPGIDPKHACHRLNIDLTFRPVIQKRRKLGPDRQSIYPG 509
           + EL++ L  + DVFAWTH DMPGIDP+ ACHRL I    R V QKRR    +R     G
Sbjct: 753 KQELVKCLQAHADVFAWTHEDMPGIDPEVACHRLAIKKGARAVRQKRRCFNQERYEAING 812


>emb|CAN69925.1| hypothetical protein VITISV_027208 [Vitis vinifera]
          Length = 982

 Score =  240 bits (613), Expect(2) = 5e-67
 Identities = 106/178 (59%), Positives = 142/178 (79%)
 Frame = -1

Query: 534 LIDNQFIREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATA 355
           L+++ FIRE  Y  W+AN V+V K  G+WR+CVD+T+LN ACPKDS+PLP ID +VD+TA
Sbjct: 44  LLESGFIREIAYLDWLANVVVVPKKEGKWRVCVDYTNLNNACPKDSFPLPRIDQIVDSTA 103

Query: 354 GHELMSFMDAYSGYNQIRMHPEDEENTSFFSARGIYCYKMMPFGLKNAGATYQRLVNKMF 175
           G  ++SF+DA+SGY+QI M P DEE T+F +  G+YCYK+MPFGLKNAGATYQRL+ K+F
Sbjct: 104 GQRMLSFLDAFSGYHQIPMSPADEEKTAFITPHGLYCYKVMPFGLKNAGATYQRLMTKIF 163

Query: 174 EKMIGHTMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYKMMLNPRKCTFGVGSGKFL 1
           + +IGHT+EVY+DD++VKS  + +H+  L ++F +LR Y M LNP KC FGV +GKFL
Sbjct: 164 KPLIGHTVEVYIDDIVVKSKTLEEHVQHLQEVFHLLRRYDMKLNPSKCAFGVSAGKFL 221



 Score = 41.2 bits (95), Expect(2) = 5e-67
 Identities = 20/36 (55%), Positives = 23/36 (63%)
 Frame = -3

Query: 625 MPGIDPKHACHRLNIDLTFRPVIQKRRKLGPDRQSI 518
           M GI P  A HRLN+  T RPV QK R+  PDRQ +
Sbjct: 1   MKGIHPSIASHRLNVFSTARPVRQKIRRFHPDRQKV 36


>emb|CAN71857.1| hypothetical protein VITISV_012968 [Vitis vinifera]
          Length = 781

 Score =  227 bits (578), Expect(2) = 1e-66
 Identities = 101/178 (56%), Positives = 138/178 (77%)
 Frame = -1

Query: 534  LIDNQFIREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATA 355
            L++  FI+E  YP W+ N V+V K  G+WR+CVD+T+LN ACPKDS+PLP ID +VD+TA
Sbjct: 542  LLEAGFIKEVDYPDWLTNVVVVPKKEGKWRVCVDYTNLNNACPKDSFPLPRIDQIVDSTA 601

Query: 354  GHELMSFMDAYSGYNQIRMHPEDEENTSFFSARGIYCYKMMPFGLKNAGATYQRLVNKMF 175
            G  ++SF+DA+SGY+QI M P DEE T+F +  G+YCYK+M F LKNAGATYQRL+ K+F
Sbjct: 602  GQGMLSFLDAFSGYHQIPMSPADEEKTAFITLHGLYCYKVMSFRLKNAGATYQRLMTKIF 661

Query: 174  EKMIGHTMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYKMMLNPRKCTFGVGSGKFL 1
            + ++G T+EVY+DD++VKS    +H+  L ++F +LR+Y M LNP KC FGV +GKFL
Sbjct: 662  KPLVGRTVEVYIDDIVVKSKTREEHVLHLQEVFHLLRKYGMKLNPSKCAFGVSAGKFL 719



 Score = 53.5 bits (127), Expect(2) = 1e-66
 Identities = 26/50 (52%), Positives = 31/50 (62%)
 Frame = -3

Query: 667 LGNNLDVFAWTHADMPGIDPKHACHRLNIDLTFRPVIQKRRKLGPDRQSI 518
           L  N DVFAW H+DM GI P    HRLN+  T RP+ Q+ R+   DRQ I
Sbjct: 485 LRQNHDVFAWAHSDMKGIHPSITSHRLNVLPTARPIQQRVRRFHLDRQKI 534


>emb|CAN71502.1| hypothetical protein VITISV_021013 [Vitis vinifera]
          Length = 936

 Score =  239 bits (610), Expect(2) = 2e-66
 Identities = 105/178 (58%), Positives = 142/178 (79%)
 Frame = -1

Query: 534 LIDNQFIREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATA 355
           L+++ FIRE  YP W+AN V+V K  G+WR+C+D+T+LN ACPKDS+PLP ID +VD+TA
Sbjct: 44  LLESGFIREVAYPDWLANVVVVPKKEGKWRVCIDYTNLNNACPKDSFPLPRIDQIVDSTA 103

Query: 354 GHELMSFMDAYSGYNQIRMHPEDEENTSFFSARGIYCYKMMPFGLKNAGATYQRLVNKMF 175
           G  ++SF+DA+SGY+QI M P DEE T+F +  G+YCYK+MPFGLKNAGATYQRL+ K+F
Sbjct: 104 GQGMLSFLDAFSGYHQIPMSPTDEEKTAFITPHGLYCYKVMPFGLKNAGATYQRLMTKIF 163

Query: 174 EKMIGHTMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYKMMLNPRKCTFGVGSGKFL 1
           + +IGHT+EVY+DD++VK     +H+  L ++F +LR+Y M LNP KC FGV +GKFL
Sbjct: 164 KPLIGHTVEVYIDDIVVKIKTREEHVLHLQEVFHLLRKYDMKLNPSKCAFGVSAGKFL 221



 Score = 40.4 bits (93), Expect(2) = 2e-66
 Identities = 19/36 (52%), Positives = 23/36 (63%)
 Frame = -3

Query: 625 MPGIDPKHACHRLNIDLTFRPVIQKRRKLGPDRQSI 518
           M GI P  A HRLN+  T +PV QK R+  PDRQ +
Sbjct: 1   MKGIHPSIASHRLNVFTTAKPVWQKIRRFHPDRQKV 36


>gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score =  257 bits (657), Expect = 2e-66
 Identities = 117/172 (68%), Positives = 145/172 (84%)
 Frame = -1

Query: 516  IREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATAGHELMS 337
            IRE  YP W+AN V+VKK NG+ R+C+DFTDLNKACPKDS+PLP+ID +V++TAG+EL+S
Sbjct: 493  IREVQYPDWLANTVVVKKKNGKDRVCIDFTDLNKACPKDSFPLPHIDRLVESTAGNELLS 552

Query: 336  FMDAYSGYNQIRMHPEDEENTSFFSARGIYCYKMMPFGLKNAGATYQRLVNKMFEKMIGH 157
            FMDA+SGYNQI M+PED+E T F + RGIYCYK+MPFGL+NAGATY RLVNKMF + +G 
Sbjct: 553  FMDAFSGYNQIMMNPEDQEKTLFITDRGIYCYKVMPFGLRNAGATYPRLVNKMFSEHVGK 612

Query: 156  TMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYKMMLNPRKCTFGVGSGKFL 1
            TMEVY+DDML+KSL   DH+  L + FA+L +Y+M LNP KCTFGV SG+FL
Sbjct: 613  TMEVYIDDMLIKSLKKEDHVKHLEECFAILNQYQMKLNPAKCTFGVPSGEFL 664


>gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1181

 Score =  218 bits (555), Expect(2) = 4e-66
 Identities = 100/178 (56%), Positives = 130/178 (73%)
 Frame = -1

Query: 534  LIDNQFIREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATA 355
            LID+ F+RE  +P WVAN V V K NG+ R+C+DF DLN  CPKD +PLP  D M+D T 
Sbjct: 705  LIDSGFVREEQHPDWVANIVPVPKKNGKVRICIDFRDLNATCPKDEFPLPITDVMIDNTC 764

Query: 354  GHELMSFMDAYSGYNQIRMHPEDEENTSFFSARGIYCYKMMPFGLKNAGATYQRLVNKMF 175
            G+E MSFMD +SGYNQI+MHP+DE++T+F +  G+YCY +MPFGLKNAGATYQR +N +F
Sbjct: 765  GYERMSFMDGFSGYNQIKMHPDDEKHTAFRTPLGVYCYTVMPFGLKNAGATYQRAMNTIF 824

Query: 174  EKMIGHTMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYKMMLNPRKCTFGVGSGKFL 1
             + +   +E YVDD+ VKS    DHL DL  MF ++R +++ +NP K   GV SGKFL
Sbjct: 825  HEHLRKKIECYVDDVAVKSQCKDDHLADLKTMFEIMRAHQLKMNPTKSFLGVSSGKFL 882



 Score = 60.5 bits (145), Expect(2) = 4e-66
 Identities = 26/53 (49%), Positives = 36/53 (67%)
 Frame = -3

Query: 688 RSELIEFLGNNLDVFAWTHADMPGIDPKHACHRLNIDLTFRPVIQKRRKLGPD 530
           +  LI  +   +DVFAW + DMPG+DPK A HRLNID   +PV Q++R+  P+
Sbjct: 641 KENLISLIREYIDVFAWNYEDMPGLDPKVAMHRLNIDPDVKPVKQQQRRFRPE 693