BLASTX nr result

ID: Rehmannia24_contig00026541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00026541
         (589 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006340857.1| PREDICTED: DNA mismatch repair protein MLH3-...    58   2e-06
ref|XP_006340856.1| PREDICTED: DNA mismatch repair protein MLH3-...    58   2e-06
ref|XP_006340855.1| PREDICTED: DNA mismatch repair protein MLH3-...    58   2e-06
ref|XP_006340854.1| PREDICTED: DNA mismatch repair protein MLH3-...    58   2e-06
ref|XP_006340852.1| PREDICTED: DNA mismatch repair protein MLH3-...    58   2e-06
ref|XP_006340851.1| PREDICTED: DNA mismatch repair protein MLH3-...    58   2e-06
ref|XP_006340850.1| PREDICTED: DNA mismatch repair protein MLH3-...    58   2e-06
ref|XP_006340849.1| PREDICTED: DNA mismatch repair protein MLH3-...    58   2e-06
ref|XP_006340848.1| PREDICTED: DNA mismatch repair protein MLH3-...    58   2e-06
ref|XP_006340847.1| PREDICTED: DNA mismatch repair protein MLH3-...    58   2e-06

>ref|XP_006340857.1| PREDICTED: DNA mismatch repair protein MLH3-like isoform X11
           [Solanum tuberosum]
          Length = 1122

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
 Frame = +1

Query: 1   EFKDWGTILTFIENGVVRLWTENISPVTSEKDMPNNFGSGKKRRKEQNCLTPLDLDSPQQ 180
           EFKDWG +L FI + V  LWTE     ++  D+P N    KKR + Q+C   LDL SP  
Sbjct: 344 EFKDWGPVLLFIGDTVANLWTE-----SNSADIPMNIEIRKKRCRAQSCKGTLDLLSPLP 398

Query: 181 KKLCNDYDNMAEIEG-----WLSSHEK 246
           KKL  +     +I+      W S+ EK
Sbjct: 399 KKLTGECTVRRDIQSPQNTLWESASEK 425


>ref|XP_006340856.1| PREDICTED: DNA mismatch repair protein MLH3-like isoform X10
           [Solanum tuberosum]
          Length = 1127

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
 Frame = +1

Query: 1   EFKDWGTILTFIENGVVRLWTENISPVTSEKDMPNNFGSGKKRRKEQNCLTPLDLDSPQQ 180
           EFKDWG +L FI + V  LWTE     ++  D+P N    KKR + Q+C   LDL SP  
Sbjct: 344 EFKDWGPVLLFIGDTVANLWTE-----SNSADIPMNIEIRKKRCRAQSCKGTLDLLSPLP 398

Query: 181 KKLCNDYDNMAEIEG-----WLSSHEK 246
           KKL  +     +I+      W S+ EK
Sbjct: 399 KKLTGECTVRRDIQSPQNTLWESASEK 425


>ref|XP_006340855.1| PREDICTED: DNA mismatch repair protein MLH3-like isoform X9
           [Solanum tuberosum]
          Length = 1148

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
 Frame = +1

Query: 1   EFKDWGTILTFIENGVVRLWTENISPVTSEKDMPNNFGSGKKRRKEQNCLTPLDLDSPQQ 180
           EFKDWG +L FI + V  LWTE     ++  D+P N    KKR + Q+C   LDL SP  
Sbjct: 249 EFKDWGPVLLFIGDTVANLWTE-----SNSADIPMNIEIRKKRCRAQSCKGTLDLLSPLP 303

Query: 181 KKLCNDYDNMAEIEG-----WLSSHEK 246
           KKL  +     +I+      W S+ EK
Sbjct: 304 KKLTGECTVRRDIQSPQNTLWESASEK 330


>ref|XP_006340854.1| PREDICTED: DNA mismatch repair protein MLH3-like isoform X8
           [Solanum tuberosum]
          Length = 1182

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
 Frame = +1

Query: 1   EFKDWGTILTFIENGVVRLWTENISPVTSEKDMPNNFGSGKKRRKEQNCLTPLDLDSPQQ 180
           EFKDWG +L FI + V  LWTE     ++  D+P N    KKR + Q+C   LDL SP  
Sbjct: 344 EFKDWGPVLLFIGDTVANLWTE-----SNSADIPMNIEIRKKRCRAQSCKGTLDLLSPLP 398

Query: 181 KKLCNDYDNMAEIEG-----WLSSHEK 246
           KKL  +     +I+      W S+ EK
Sbjct: 399 KKLTGECTVRRDIQSPQNTLWESASEK 425


>ref|XP_006340852.1| PREDICTED: DNA mismatch repair protein MLH3-like isoform X6
           [Solanum tuberosum] gi|565347682|ref|XP_006340853.1|
           PREDICTED: DNA mismatch repair protein MLH3-like isoform
           X7 [Solanum tuberosum]
          Length = 1218

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
 Frame = +1

Query: 1   EFKDWGTILTFIENGVVRLWTENISPVTSEKDMPNNFGSGKKRRKEQNCLTPLDLDSPQQ 180
           EFKDWG +L FI + V  LWTE     ++  D+P N    KKR + Q+C   LDL SP  
Sbjct: 319 EFKDWGPVLLFIGDTVANLWTE-----SNSADIPMNIEIRKKRCRAQSCKGTLDLLSPLP 373

Query: 181 KKLCNDYDNMAEIEG-----WLSSHEK 246
           KKL  +     +I+      W S+ EK
Sbjct: 374 KKLTGECTVRRDIQSPQNTLWESASEK 400


>ref|XP_006340851.1| PREDICTED: DNA mismatch repair protein MLH3-like isoform X5
           [Solanum tuberosum]
          Length = 1223

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
 Frame = +1

Query: 1   EFKDWGTILTFIENGVVRLWTENISPVTSEKDMPNNFGSGKKRRKEQNCLTPLDLDSPQQ 180
           EFKDWG +L FI + V  LWTE     ++  D+P N    KKR + Q+C   LDL SP  
Sbjct: 344 EFKDWGPVLLFIGDTVANLWTE-----SNSADIPMNIEIRKKRCRAQSCKGTLDLLSPLP 398

Query: 181 KKLCNDYDNMAEIEG-----WLSSHEK 246
           KKL  +     +I+      W S+ EK
Sbjct: 399 KKLTGECTVRRDIQSPQNTLWESASEK 425


>ref|XP_006340850.1| PREDICTED: DNA mismatch repair protein MLH3-like isoform X4
           [Solanum tuberosum]
          Length = 1223

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
 Frame = +1

Query: 1   EFKDWGTILTFIENGVVRLWTENISPVTSEKDMPNNFGSGKKRRKEQNCLTPLDLDSPQQ 180
           EFKDWG +L FI + V  LWTE     ++  D+P N    KKR + Q+C   LDL SP  
Sbjct: 344 EFKDWGPVLLFIGDTVANLWTE-----SNSADIPMNIEIRKKRCRAQSCKGTLDLLSPLP 398

Query: 181 KKLCNDYDNMAEIEG-----WLSSHEK 246
           KKL  +     +I+      W S+ EK
Sbjct: 399 KKLTGECTVRRDIQSPQNTLWESASEK 425


>ref|XP_006340849.1| PREDICTED: DNA mismatch repair protein MLH3-like isoform X3
           [Solanum tuberosum]
          Length = 1230

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
 Frame = +1

Query: 1   EFKDWGTILTFIENGVVRLWTENISPVTSEKDMPNNFGSGKKRRKEQNCLTPLDLDSPQQ 180
           EFKDWG +L FI + V  LWTE     ++  D+P N    KKR + Q+C   LDL SP  
Sbjct: 331 EFKDWGPVLLFIGDTVANLWTE-----SNSADIPMNIEIRKKRCRAQSCKGTLDLLSPLP 385

Query: 181 KKLCNDYDNMAEIEG-----WLSSHEK 246
           KKL  +     +I+      W S+ EK
Sbjct: 386 KKLTGECTVRRDIQSPQNTLWESASEK 412


>ref|XP_006340848.1| PREDICTED: DNA mismatch repair protein MLH3-like isoform X2
           [Solanum tuberosum]
          Length = 1237

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
 Frame = +1

Query: 1   EFKDWGTILTFIENGVVRLWTENISPVTSEKDMPNNFGSGKKRRKEQNCLTPLDLDSPQQ 180
           EFKDWG +L FI + V  LWTE     ++  D+P N    KKR + Q+C   LDL SP  
Sbjct: 344 EFKDWGPVLLFIGDTVANLWTE-----SNSADIPMNIEIRKKRCRAQSCKGTLDLLSPLP 398

Query: 181 KKLCNDYDNMAEIEG-----WLSSHEK 246
           KKL  +     +I+      W S+ EK
Sbjct: 399 KKLTGECTVRRDIQSPQNTLWESASEK 425


>ref|XP_006340847.1| PREDICTED: DNA mismatch repair protein MLH3-like isoform X1
           [Solanum tuberosum]
          Length = 1243

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
 Frame = +1

Query: 1   EFKDWGTILTFIENGVVRLWTENISPVTSEKDMPNNFGSGKKRRKEQNCLTPLDLDSPQQ 180
           EFKDWG +L FI + V  LWTE     ++  D+P N    KKR + Q+C   LDL SP  
Sbjct: 344 EFKDWGPVLLFIGDTVANLWTE-----SNSADIPMNIEIRKKRCRAQSCKGTLDLLSPLP 398

Query: 181 KKLCNDYDNMAEIEG-----WLSSHEK 246
           KKL  +     +I+      W S+ EK
Sbjct: 399 KKLTGECTVRRDIQSPQNTLWESASEK 425


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