BLASTX nr result

ID: Rehmannia24_contig00026128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00026128
         (434 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164821.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    95   8e-18
ref|XP_004141097.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...    95   8e-18
ref|XP_006338578.1| PREDICTED: ATP-dependent RNA helicase-like p...    95   1e-17
ref|NP_196965.2| DEAD-box ATP-dependent RNA helicase 46 [Arabido...    94   2e-17
ref|XP_002871624.1| ATP binding protein [Arabidopsis lyrata subs...    94   2e-17
ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putativ...    94   2e-17
ref|NP_001190309.1| DEAD-box ATP-dependent RNA helicase 46 [Arab...    94   2e-17
emb|CAB87628.1| DRH1 DEAD box protein-like [Arabidopsis thaliana]      94   2e-17
ref|XP_006287261.1| hypothetical protein CARUB_v10000450mg [Caps...    93   4e-17
ref|XP_006287260.1| hypothetical protein CARUB_v10000450mg [Caps...    93   4e-17
gb|EXC20307.1| Shaggy-related protein kinase epsilon [Morus nota...    92   7e-17
ref|XP_006399975.1| hypothetical protein EUTSA_v10012853mg [Eutr...    92   9e-17
ref|XP_006399974.1| hypothetical protein EUTSA_v10012853mg [Eutr...    92   9e-17
ref|XP_004232310.1| PREDICTED: ATP-dependent RNA helicase-like p...    92   9e-17
ref|XP_004232309.1| PREDICTED: ATP-dependent RNA helicase-like p...    92   9e-17
ref|XP_006470297.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    91   1e-16
ref|XP_006446540.1| hypothetical protein CICLE_v10014449mg [Citr...    91   1e-16
ref|XP_003618186.1| DEAD-box ATP-dependent RNA helicase [Medicag...    91   1e-16
ref|XP_002324002.1| hypothetical protein POPTR_0017s10760g [Popu...    91   1e-16
ref|XP_003618185.1| DEAD-box ATP-dependent RNA helicase [Medicag...    91   1e-16

>ref|XP_004164821.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Cucumis
           sativus]
          Length = 778

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 47/84 (55%), Positives = 56/84 (66%), Gaps = 4/84 (4%)
 Frame = -1

Query: 245 AAGIRYAPQDPTLPKPWRGLVDSNTGYLYFWNPETNVTQYERPVASSHEXXXXXXXXXXX 66
           + G RYAP+DPTLPKPWRGLVD  TGYLYFWNPETNVTQYERPVA++             
Sbjct: 9   SVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSSIVSISSSV 68

Query: 65  XVQK-SPGHCTE---NDDEDRYNK 6
            +QK S GH      N++ D+Y +
Sbjct: 69  QIQKPSSGHSYNNNLNENNDKYGR 92


>ref|XP_004141097.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           46-like [Cucumis sativus]
          Length = 785

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 47/84 (55%), Positives = 56/84 (66%), Gaps = 4/84 (4%)
 Frame = -1

Query: 245 AAGIRYAPQDPTLPKPWRGLVDSNTGYLYFWNPETNVTQYERPVASSHEXXXXXXXXXXX 66
           + G RYAP+DPTLPKPWRGLVD  TGYLYFWNPETNVTQYERPVA++             
Sbjct: 9   SVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSSIVSISSSV 68

Query: 65  XVQK-SPGHCTE---NDDEDRYNK 6
            +QK S GH      N++ D+Y +
Sbjct: 69  QIQKPSSGHSYNNNLNENNDKYGR 92


>ref|XP_006338578.1| PREDICTED: ATP-dependent RNA helicase-like protein DB10-like
           [Solanum tuberosum]
          Length = 730

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 39/49 (79%), Positives = 44/49 (89%)
 Frame = -1

Query: 248 TAAGIRYAPQDPTLPKPWRGLVDSNTGYLYFWNPETNVTQYERPVASSH 102
           ++ G RYAP+DPTLPKPW+GLVD  TGYLYFWNPETN TQYERPVA+SH
Sbjct: 8   SSTGPRYAPEDPTLPKPWKGLVDGKTGYLYFWNPETNTTQYERPVATSH 56


>ref|NP_196965.2| DEAD-box ATP-dependent RNA helicase 46 [Arabidopsis thaliana]
           gi|332004671|gb|AED92054.1| DEAD-box ATP-dependent RNA
           helicase 46 [Arabidopsis thaliana]
          Length = 712

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 39/48 (81%), Positives = 44/48 (91%)
 Frame = -1

Query: 248 TAAGIRYAPQDPTLPKPWRGLVDSNTGYLYFWNPETNVTQYERPVASS 105
           TA+ IRYAP+DP LPKPW+GLVDS TGYLYFWNPETNVTQYERP +S+
Sbjct: 4   TASAIRYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPASSA 51


>ref|XP_002871624.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317461|gb|EFH47883.1| ATP binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 713

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
 Frame = -1

Query: 248 TAAGIRYAPQDPTLPKPWRGLVDSNTGYLYFWNPETNVTQYERPVASS-HEXXXXXXXXX 72
           TA+ IRYAP+DP LPKPW+GLVDS TGYLYFWNPETNVTQYERP +S+  +         
Sbjct: 6   TASAIRYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPSSSAPPKLAAIPISSS 65

Query: 71  XXXVQKSPGHCTENDDEDRYNK 6
               Q+S        +ED+Y +
Sbjct: 66  VQTTQQSSSGFNSGKEEDKYGR 87


>ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223539345|gb|EEF40936.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 781

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = -1

Query: 242 AGIRYAPQDPTLPKPWRGLVDSNTGYLYFWNPETNVTQYERPVASS 105
           AG RYAP+DPTLPKPWRGLVD  TGYLYFWNPETNVTQYERP+A++
Sbjct: 7   AGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPIATA 52


>ref|NP_001190309.1| DEAD-box ATP-dependent RNA helicase 46 [Arabidopsis thaliana]
           gi|114153757|sp|Q9LYJ9.2|RH46_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 46
           gi|332004672|gb|AED92055.1| DEAD-box ATP-dependent RNA
           helicase 46 [Arabidopsis thaliana]
          Length = 645

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 39/48 (81%), Positives = 44/48 (91%)
 Frame = -1

Query: 248 TAAGIRYAPQDPTLPKPWRGLVDSNTGYLYFWNPETNVTQYERPVASS 105
           TA+ IRYAP+DP LPKPW+GLVDS TGYLYFWNPETNVTQYERP +S+
Sbjct: 4   TASAIRYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPASSA 51


>emb|CAB87628.1| DRH1 DEAD box protein-like [Arabidopsis thaliana]
          Length = 713

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 39/48 (81%), Positives = 44/48 (91%)
 Frame = -1

Query: 248 TAAGIRYAPQDPTLPKPWRGLVDSNTGYLYFWNPETNVTQYERPVASS 105
           TA+ IRYAP+DP LPKPW+GLVDS TGYLYFWNPETNVTQYERP +S+
Sbjct: 4   TASAIRYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPASSA 51


>ref|XP_006287261.1| hypothetical protein CARUB_v10000450mg [Capsella rubella]
           gi|482555967|gb|EOA20159.1| hypothetical protein
           CARUB_v10000450mg [Capsella rubella]
          Length = 635

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 39/48 (81%), Positives = 44/48 (91%)
 Frame = -1

Query: 248 TAAGIRYAPQDPTLPKPWRGLVDSNTGYLYFWNPETNVTQYERPVASS 105
           TA+ IRYAP+DP LPKPW+GLVDS TGYLYFWNPETNVTQYERP +S+
Sbjct: 6   TASTIRYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPASST 53


>ref|XP_006287260.1| hypothetical protein CARUB_v10000450mg [Capsella rubella]
           gi|482555966|gb|EOA20158.1| hypothetical protein
           CARUB_v10000450mg [Capsella rubella]
          Length = 595

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 39/48 (81%), Positives = 44/48 (91%)
 Frame = -1

Query: 248 TAAGIRYAPQDPTLPKPWRGLVDSNTGYLYFWNPETNVTQYERPVASS 105
           TA+ IRYAP+DP LPKPW+GLVDS TGYLYFWNPETNVTQYERP +S+
Sbjct: 6   TASTIRYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPASST 53


>gb|EXC20307.1| Shaggy-related protein kinase epsilon [Morus notabilis]
          Length = 1931

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 43/78 (55%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
 Frame = -1

Query: 242  AGIRYAPQDPTLPKPWRGLVDSNTGYLYFWNPETNVTQYERPVASS--HEXXXXXXXXXX 69
            +G RYAP+DPTLP PWRGLVD  TGYLYFWNPETNVTQYERP+ S    +          
Sbjct: 1085 SGPRYAPEDPTLPSPWRGLVDGKTGYLYFWNPETNVTQYERPIGSGPPQKSSSVLISSSV 1144

Query: 68   XXVQKSPGHCTENDDEDR 15
               Q S G  + N +ED+
Sbjct: 1145 HIQQSSQGQRSSNPNEDK 1162


>ref|XP_006399975.1| hypothetical protein EUTSA_v10012853mg [Eutrema salsugineum]
           gi|557101065|gb|ESQ41428.1| hypothetical protein
           EUTSA_v10012853mg [Eutrema salsugineum]
          Length = 691

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 39/48 (81%), Positives = 42/48 (87%)
 Frame = -1

Query: 248 TAAGIRYAPQDPTLPKPWRGLVDSNTGYLYFWNPETNVTQYERPVASS 105
           TA  IRYAP+DP LPKPW+GLVDS TGYLYFWNPETNVTQYERP  S+
Sbjct: 6   TAPTIRYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPACSA 53


>ref|XP_006399974.1| hypothetical protein EUTSA_v10012853mg [Eutrema salsugineum]
           gi|557101064|gb|ESQ41427.1| hypothetical protein
           EUTSA_v10012853mg [Eutrema salsugineum]
          Length = 652

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 39/48 (81%), Positives = 42/48 (87%)
 Frame = -1

Query: 248 TAAGIRYAPQDPTLPKPWRGLVDSNTGYLYFWNPETNVTQYERPVASS 105
           TA  IRYAP+DP LPKPW+GLVDS TGYLYFWNPETNVTQYERP  S+
Sbjct: 22  TAPTIRYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPACSA 69


>ref|XP_004232310.1| PREDICTED: ATP-dependent RNA helicase-like protein DB10-like
           isoform 2 [Solanum lycopersicum]
          Length = 683

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 37/49 (75%), Positives = 43/49 (87%)
 Frame = -1

Query: 248 TAAGIRYAPQDPTLPKPWRGLVDSNTGYLYFWNPETNVTQYERPVASSH 102
           ++ G RYAP+DPTLPKPW+GLVD  TGYLYFWNPETN TQYE+PVA+ H
Sbjct: 8   SSTGPRYAPEDPTLPKPWKGLVDGKTGYLYFWNPETNTTQYEKPVATPH 56


>ref|XP_004232309.1| PREDICTED: ATP-dependent RNA helicase-like protein DB10-like
           isoform 1 [Solanum lycopersicum]
          Length = 706

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 37/49 (75%), Positives = 43/49 (87%)
 Frame = -1

Query: 248 TAAGIRYAPQDPTLPKPWRGLVDSNTGYLYFWNPETNVTQYERPVASSH 102
           ++ G RYAP+DPTLPKPW+GLVD  TGYLYFWNPETN TQYE+PVA+ H
Sbjct: 8   SSTGPRYAPEDPTLPKPWKGLVDGKTGYLYFWNPETNTTQYEKPVATPH 56


>ref|XP_006470297.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Citrus
           sinensis]
          Length = 703

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 37/44 (84%), Positives = 41/44 (93%)
 Frame = -1

Query: 248 TAAGIRYAPQDPTLPKPWRGLVDSNTGYLYFWNPETNVTQYERP 117
           T+A +RYAP+DPTLPKPW+GLVD  TGYLYFWNPETNVTQYERP
Sbjct: 10  TSASVRYAPEDPTLPKPWKGLVDGRTGYLYFWNPETNVTQYERP 53


>ref|XP_006446540.1| hypothetical protein CICLE_v10014449mg [Citrus clementina]
           gi|557549151|gb|ESR59780.1| hypothetical protein
           CICLE_v10014449mg [Citrus clementina]
          Length = 703

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 37/44 (84%), Positives = 41/44 (93%)
 Frame = -1

Query: 248 TAAGIRYAPQDPTLPKPWRGLVDSNTGYLYFWNPETNVTQYERP 117
           T+A +RYAP+DPTLPKPW+GLVD  TGYLYFWNPETNVTQYERP
Sbjct: 10  TSASVRYAPEDPTLPKPWKGLVDGRTGYLYFWNPETNVTQYERP 53


>ref|XP_003618186.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355493201|gb|AES74404.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 619

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 46/81 (56%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
 Frame = -1

Query: 245 AAGIRYAPQDPTLPKPWRGLVDSNTGYLYFWNPETNVTQYERPVASSHEXXXXXXXXXXX 66
           A G RYAP DPTLPKPW+GLVD  TGYLYFWNPETNVTQYERP +S+             
Sbjct: 8   AVGPRYAPADPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERPSSSAAPLKTSSVPSSSV 67

Query: 65  XVQK-SPGHCTENDDEDRYNK 6
            VQ+ S G     D  DRY++
Sbjct: 68  QVQQSSQGRGRSPDFSDRYDR 88


>ref|XP_002324002.1| hypothetical protein POPTR_0017s10760g [Populus trichocarpa]
           gi|222867004|gb|EEF04135.1| hypothetical protein
           POPTR_0017s10760g [Populus trichocarpa]
          Length = 726

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 39/48 (81%), Positives = 42/48 (87%)
 Frame = -1

Query: 248 TAAGIRYAPQDPTLPKPWRGLVDSNTGYLYFWNPETNVTQYERPVASS 105
           ++AG RYAP DPTLPKPWRGLVD  TGYLYFWNPETNVTQYERP  S+
Sbjct: 8   SSAGPRYAPDDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPSTSA 55


>ref|XP_003618185.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355493200|gb|AES74403.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 718

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 46/81 (56%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
 Frame = -1

Query: 245 AAGIRYAPQDPTLPKPWRGLVDSNTGYLYFWNPETNVTQYERPVASSHEXXXXXXXXXXX 66
           A G RYAP DPTLPKPW+GLVD  TGYLYFWNPETNVTQYERP +S+             
Sbjct: 8   AVGPRYAPADPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERPSSSAAPLKTSSVPSSSV 67

Query: 65  XVQK-SPGHCTENDDEDRYNK 6
            VQ+ S G     D  DRY++
Sbjct: 68  QVQQSSQGRGRSPDFSDRYDR 88


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