BLASTX nr result
ID: Rehmannia24_contig00026112
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00026112
(656 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme... 241 1e-61
ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polyme... 241 1e-61
ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme... 232 8e-59
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 222 9e-56
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 214 1e-53
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu... 211 2e-52
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu... 211 2e-52
gb|EXB59781.1| putative RNA-dependent RNA polymerase 4 [Morus no... 208 1e-51
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 208 1e-51
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr... 208 1e-51
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme... 207 3e-51
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu... 205 1e-50
gb|ESW24973.1| hypothetical protein PHAVU_004G1764001g, partial ... 204 1e-50
ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Caps... 201 2e-49
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 193 3e-47
ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabid... 192 1e-46
ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutr... 190 4e-46
gb|EMJ05474.1| hypothetical protein PRUPE_ppa001584mg [Prunus pe... 189 5e-46
ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polyme... 189 8e-46
ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [A... 188 1e-45
>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 1110
Score = 241 bits (616), Expect = 1e-61
Identities = 124/218 (56%), Positives = 157/218 (72%)
Frame = -3
Query: 654 YGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILI 475
YG C+ R Q+LDWDSG+THLY+CHV DGSY FKGPYL + RTHLQ+SLGD+N+LI
Sbjct: 298 YGH-LCEHNKRVQYLDWDSGRTHLYHCHVHSDGSYTFKGPYLKAERTHLQQSLGDENVLI 356
Query: 474 VKFLEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAVKCYFVHI 295
VKF ++ + IV+ GILVGLRRY + DKEEK S VKCYFV +
Sbjct: 357 VKFEQNTPGCPEEIVQNGILVGLRRYRFFVYKDDGKKR--SSKDKEEKIDS-VKCYFVRM 413
Query: 294 DSVSPYGCDENYILYGKTIGEARCLFMHINTLSTIEKYMARFSLILSKTIKLEVDLAAAT 115
+S++PY E YIL K + EARC FMH++ +S++ KYMARFSL LS T+KL+VDL +
Sbjct: 414 ESLNPYE-KETYILRDKMVHEARCNFMHVHMVSSMAKYMARFSLTLSTTVKLQVDLNSVN 472
Query: 114 VETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDL 1
++ IEDI D++G II+DEDGKP++HTDGTGYISEDL
Sbjct: 473 IDRIEDICCHDKSGRIIYDEDGKPLIHTDGTGYISEDL 510
>ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
lycopersicum]
Length = 759
Score = 241 bits (616), Expect = 1e-61
Identities = 124/218 (56%), Positives = 157/218 (72%)
Frame = -3
Query: 654 YGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILI 475
YG C+ R Q+LDWDSG+THLY+CHV D SY FKGPYL + RTHLQ SLGD+N+LI
Sbjct: 242 YGH-LCEHNKRVQYLDWDSGRTHLYHCHVHSDRSYTFKGPYLKAERTHLQHSLGDENVLI 300
Query: 474 VKFLEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAVKCYFVHI 295
VKF ++ + IV+ GILVGLRRY DKEEK S VKCYFV +
Sbjct: 301 VKFEQNTPGCPEEIVQNGILVGLRRYRFFVYKDDGKKRRLK--DKEEKIDS-VKCYFVRM 357
Query: 294 DSVSPYGCDENYILYGKTIGEARCLFMHINTLSTIEKYMARFSLILSKTIKLEVDLAAAT 115
+S++PY +E YIL+ K + EARC FMH++ +S++ KYMARFSLILS T+KL+VDL +
Sbjct: 358 ESLNPYE-NETYILHDKMVHEARCNFMHVHMVSSMAKYMARFSLILSTTVKLQVDLNSVN 416
Query: 114 VETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDL 1
++ IEDI D++G II+DEDGKP++HTDGTGYISEDL
Sbjct: 417 IDRIEDIYCHDKSGRIIYDEDGKPLIHTDGTGYISEDL 454
>ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 911
Score = 232 bits (591), Expect = 8e-59
Identities = 117/218 (53%), Positives = 156/218 (71%)
Frame = -3
Query: 654 YGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILI 475
+G+ + E DRS+++DW+ KTH+YYCH+ ++G FKGPYLN++RTHLQR+LGDDN+L+
Sbjct: 215 FGKAYYAESDRSKYVDWNCRKTHIYYCHIKQNGQCTFKGPYLNTARTHLQRALGDDNVLL 274
Query: 474 VKFLEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAVKCYFVHI 295
VKF+ED + A + IVEEGILVGLRRY M K K +++KCYFV
Sbjct: 275 VKFVEDTSCA-NMIVEEGILVGLRRYRFFVYKDDKEKKKSPAMMK--KKTASLKCYFVRF 331
Query: 294 DSVSPYGCDENYILYGKTIGEARCLFMHINTLSTIEKYMARFSLILSKTIKLEVDLAAAT 115
+S+ +Y+ K I +ARC FMH++ +S + KY AR SLILSKTIKL+V+LA+ T
Sbjct: 332 ESIETCNDGGSYVFSTKRISQARCQFMHVHMVSNMAKYAARLSLILSKTIKLQVNLASVT 391
Query: 114 VETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDL 1
+E IEDI +DENG II DEDG+P +HTDGTG+ISEDL
Sbjct: 392 IERIEDILCRDENGCIIKDEDGEPRIHTDGTGFISEDL 429
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 222 bits (565), Expect = 9e-56
Identities = 116/229 (50%), Positives = 154/229 (67%), Gaps = 12/229 (5%)
Frame = -3
Query: 651 GQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIV 472
G+KF E DR + DWDS KTH+Y+CHV DGSY FKGPYLN +RTHLQR LGD+NIL+V
Sbjct: 154 GRKFIKEEDRQRSFDWDSDKTHIYHCHVSPDGSYRFKGPYLNKTRTHLQRVLGDENILLV 213
Query: 471 KFLEDGA------YATDN------IVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKT 328
KF ED +TD+ I EGI VGLR+Y + +K++
Sbjct: 214 KFAEDVTDRSSLNCSTDSNASYNKIAREGIFVGLRQYRFFVFKDG------GKEEKKKNP 267
Query: 327 YSAVKCYFVHIDSVSPYGCDENYILYGKTIGEARCLFMHINTLSTIEKYMARFSLILSKT 148
S+VKCYFV ++S + L GKT+ EARC+FMH + +S++ KYMARFSLILSKT
Sbjct: 268 TSSVKCYFVFMESSA---------LSGKTVHEARCIFMHAHMVSSVAKYMARFSLILSKT 318
Query: 147 IKLEVDLAAATVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDL 1
+KL+VDL+ ++ I+D P +DE+G +++DED KP++ TDGTG+ISEDL
Sbjct: 319 VKLDVDLSTVNIQRIDDEPGRDEDGHVVYDEDWKPLILTDGTGFISEDL 367
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 214 bits (546), Expect = 1e-53
Identities = 116/237 (48%), Positives = 154/237 (64%), Gaps = 20/237 (8%)
Frame = -3
Query: 651 GQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFK--------GPYLNSSRTHLQRSL 496
G+KF E DR + DWDS KTH+Y+CHV DGSY FK GPYLN +RTHLQR L
Sbjct: 154 GRKFIKEEDRQRSFDWDSDKTHIYHCHVSPDGSYRFKVCISSSLNGPYLNKTRTHLQRVL 213
Query: 495 GDDNILIVKFLEDGA------YATDN------IVEEGILVGLRRYXXXXXXXXXXXXXKN 352
GD+NIL+VKF ED +TD+ I EGI VGLR+Y
Sbjct: 214 GDENILLVKFAEDVTDRSSLNCSTDSNASYNKIAREGIFVGLRQYRFFVFKDG------G 267
Query: 351 QMDKEEKTYSAVKCYFVHIDSVSPYGCDENYILYGKTIGEARCLFMHINTLSTIEKYMAR 172
+ +K++ S+VKCYFV ++S + L GKT+ EARC+FMH + +S++ KYMAR
Sbjct: 268 KEEKKKNPTSSVKCYFVFMESSA---------LSGKTVHEARCIFMHAHMVSSVAKYMAR 318
Query: 171 FSLILSKTIKLEVDLAAATVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDL 1
FSLILSKT+KL+VDL+ ++ I+D P +DE+G +++DED KP++ TDGTG+ISEDL
Sbjct: 319 FSLILSKTVKLDVDLSTVNIQRIDDEPGRDEDGHVVYDEDWKPLILTDGTGFISEDL 375
>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334280|gb|ERP58267.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 877
Score = 211 bits (536), Expect = 2e-52
Identities = 111/227 (48%), Positives = 151/227 (66%), Gaps = 13/227 (5%)
Frame = -3
Query: 642 FCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIVKF- 466
+ E DR ++LDWDSGKTH+Y+CHV DGSY FKGPYL+ R LQR+LGDDNIL+VKF
Sbjct: 74 YIKEEDRVKYLDWDSGKTHIYHCHVDPDGSYRFKGPYLSKLRNVLQRTLGDDNILMVKFG 133
Query: 465 ------------LEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYS 322
L+D + ++ EGI VGLR Y + K++ T S
Sbjct: 134 EVKDDRDSGSRSLDDYFSKYNKVLGEGIHVGLRCYRFFVFKDGG-----KEEKKKDPTTS 188
Query: 321 AVKCYFVHIDSVSPYGCDENYILYGKTIGEARCLFMHINTLSTIEKYMARFSLILSKTIK 142
VKC+FV ++SV+ +N IL GKTI +AR +FMH++ LS++ YMARFSLILSKT+
Sbjct: 189 PVKCFFVRMESVASIDNQDN-ILSGKTIRQARSVFMHVDNLSSLSNYMARFSLILSKTMN 247
Query: 141 LEVDLAAATVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDL 1
LEVDL+ ++TI D P +D++G++++ DGKP++HTDGTG+IS DL
Sbjct: 248 LEVDLSCVDIKTIADEPCRDKDGNVVYGTDGKPLIHTDGTGFISHDL 294
>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334279|gb|ERP58266.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 899
Score = 211 bits (536), Expect = 2e-52
Identities = 111/227 (48%), Positives = 151/227 (66%), Gaps = 13/227 (5%)
Frame = -3
Query: 642 FCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIVKF- 466
+ E DR ++LDWDSGKTH+Y+CHV DGSY FKGPYL+ R LQR+LGDDNIL+VKF
Sbjct: 96 YIKEEDRVKYLDWDSGKTHIYHCHVDPDGSYRFKGPYLSKLRNVLQRTLGDDNILMVKFG 155
Query: 465 ------------LEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYS 322
L+D + ++ EGI VGLR Y + K++ T S
Sbjct: 156 EVKDDRDSGSRSLDDYFSKYNKVLGEGIHVGLRCYRFFVFKDGG-----KEEKKKDPTTS 210
Query: 321 AVKCYFVHIDSVSPYGCDENYILYGKTIGEARCLFMHINTLSTIEKYMARFSLILSKTIK 142
VKC+FV ++SV+ +N IL GKTI +AR +FMH++ LS++ YMARFSLILSKT+
Sbjct: 211 PVKCFFVRMESVASIDNQDN-ILSGKTIRQARSVFMHVDNLSSLSNYMARFSLILSKTMN 269
Query: 141 LEVDLAAATVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDL 1
LEVDL+ ++TI D P +D++G++++ DGKP++HTDGTG+IS DL
Sbjct: 270 LEVDLSCVDIKTIADEPCRDKDGNVVYGTDGKPLIHTDGTGFISHDL 316
>gb|EXB59781.1| putative RNA-dependent RNA polymerase 4 [Morus notabilis]
Length = 529
Score = 208 bits (530), Expect = 1e-51
Identities = 111/230 (48%), Positives = 151/230 (65%), Gaps = 12/230 (5%)
Frame = -3
Query: 654 YGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILI 475
+G+K+ D+ DR + DWDSGKTH+Y CHV +GS+ FKGPYL + HLQ+ LGDDN+L+
Sbjct: 171 FGEKYVDQEDRRIYHDWDSGKTHIYRCHVSPEGSFRFKGPYLEKPKKHLQKVLGDDNVLM 230
Query: 474 VKFLEDGA-----------YA-TDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEK 331
VKF E+ A YA I EGILVGLRRY + K++
Sbjct: 231 VKFAEEEAERFSIGSRDHYYAGYSKICREGILVGLRRY-----CFFVFKDGGKEEKKKDP 285
Query: 330 TYSAVKCYFVHIDSVSPYGCDENYILYGKTIGEARCLFMHINTLSTIEKYMARFSLILSK 151
T S VKC+F+ I S + + +YIL G+TI EAR LFMH +T+S++ YM RFSLILS
Sbjct: 286 TSSPVKCFFIRIHSDACIDQNVSYILSGRTISEARKLFMHAHTVSSVSNYMIRFSLILSN 345
Query: 150 TIKLEVDLAAATVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDL 1
T+ L++DL++ ++ IED QDE+G+ I+ DGKP+++TDGTG+ISEDL
Sbjct: 346 TLSLKIDLSSVNIDIIEDEYCQDESGNPIY-RDGKPLIYTDGTGFISEDL 394
>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843311|ref|XP_006475557.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
sinensis] gi|557554498|gb|ESR64512.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1013
Score = 208 bits (530), Expect = 1e-51
Identities = 110/229 (48%), Positives = 150/229 (65%), Gaps = 12/229 (5%)
Frame = -3
Query: 651 GQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIV 472
G+K + DR L WDSGKTH+Y+CH+ G+ FKGPYLN +RTHLQR LGDDNIL+V
Sbjct: 201 GRKNISQEDRRMSLKWDSGKTHMYHCHISTKGNCTFKGPYLNQTRTHLQRELGDDNILLV 260
Query: 471 KFLED-GAYATDN-----------IVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKT 328
KF E+ G + + N I EGILVGLR Y + K++ +
Sbjct: 261 KFDEELGGHRSSNNWNDSYSKYNEIAREGILVGLRCYHFFVFKDGG-----KEEKKKDPS 315
Query: 327 YSAVKCYFVHIDSVSPYGCDENYILYGKTIGEARCLFMHINTLSTIEKYMARFSLILSKT 148
S VKCYFV ++S + YIL GKT+ EAR +FMH+ T+S++ YM+R SLILSKT
Sbjct: 316 TSPVKCYFVRMESSAFIDMGYQYILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSKT 375
Query: 147 IKLEVDLAAATVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDL 1
+KLEVD + +E IED P +D++G++++ +DG+ ++HTDGTG+ISEDL
Sbjct: 376 MKLEVDFSRINIERIEDEPCRDKDGNVVY-KDGEALIHTDGTGFISEDL 423
>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843309|ref|XP_006475556.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
sinensis] gi|557554497|gb|ESR64511.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1015
Score = 208 bits (530), Expect = 1e-51
Identities = 110/229 (48%), Positives = 150/229 (65%), Gaps = 12/229 (5%)
Frame = -3
Query: 651 GQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIV 472
G+K + DR L WDSGKTH+Y+CH+ G+ FKGPYLN +RTHLQR LGDDNIL+V
Sbjct: 203 GRKNISQEDRRMSLKWDSGKTHMYHCHISTKGNCTFKGPYLNQTRTHLQRELGDDNILLV 262
Query: 471 KFLED-GAYATDN-----------IVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKT 328
KF E+ G + + N I EGILVGLR Y + K++ +
Sbjct: 263 KFDEELGGHRSSNNWNDSYSKYNEIAREGILVGLRCYHFFVFKDGG-----KEEKKKDPS 317
Query: 327 YSAVKCYFVHIDSVSPYGCDENYILYGKTIGEARCLFMHINTLSTIEKYMARFSLILSKT 148
S VKCYFV ++S + YIL GKT+ EAR +FMH+ T+S++ YM+R SLILSKT
Sbjct: 318 TSPVKCYFVRMESSAFIDMGYQYILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSKT 377
Query: 147 IKLEVDLAAATVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDL 1
+KLEVD + +E IED P +D++G++++ +DG+ ++HTDGTG+ISEDL
Sbjct: 378 MKLEVDFSRINIERIEDEPCRDKDGNVVY-KDGEALIHTDGTGFISEDL 425
>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
sativus]
Length = 1056
Score = 207 bits (526), Expect = 3e-51
Identities = 110/218 (50%), Positives = 144/218 (66%), Gaps = 12/218 (5%)
Frame = -3
Query: 618 QFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIVKFLEDGA---- 451
Q++DWD KTH+Y+CHV DGS FKGP+LN+++THLQR LGDDN+L+VKF ED +
Sbjct: 255 QYVDWDRRKTHIYHCHVALDGSCRFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTPL 314
Query: 450 --------YATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAVKCYFVHI 295
YA I +GIL+GLRRY + K+ T SAVKCYFV +
Sbjct: 315 SNHSGGSFYAYSKIARDGILLGLRRYHFFVFKDGG-----KEEKKKNPTTSAVKCYFVRM 369
Query: 294 DSVSPYGCDENYILYGKTIGEARCLFMHINTLSTIEKYMARFSLILSKTIKLEVDLAAAT 115
+S + E Y L +T+ EAR LFMH + +S+I YMARFSLILSKTI L++DL+
Sbjct: 370 ESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILSKTINLKIDLSTVN 429
Query: 114 VETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDL 1
V+ I DIP +D G++I+ DGKP++HTDGTG+ISEDL
Sbjct: 430 VQRIGDIPCKDIYGNVIY-RDGKPLIHTDGTGFISEDL 466
>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
gi|550336519|gb|ERP59562.1| hypothetical protein
POPTR_0006s17780g [Populus trichocarpa]
Length = 866
Score = 205 bits (521), Expect = 1e-50
Identities = 111/227 (48%), Positives = 149/227 (65%), Gaps = 13/227 (5%)
Frame = -3
Query: 642 FCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIVKFL 463
+ E DR ++LDWDSGK H+Y+CHV DGSY FKGPYL+ R LQR+LGDDNIL+VKF
Sbjct: 74 YIKEEDRVKYLDWDSGKAHIYHCHVDPDGSYRFKGPYLSKQRNVLQRTLGDDNILMVKFE 133
Query: 462 E------------DGAYATDN-IVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYS 322
E D +A N ++ EGI VGLR Y + K++ T S
Sbjct: 134 EVKDERYSVSSSLDNYFAKYNKVLREGIHVGLRCYRFFVFKDGG-----KEEKKKDPTTS 188
Query: 321 AVKCYFVHIDSVSPYGCDENYILYGKTIGEARCLFMHINTLSTIEKYMARFSLILSKTIK 142
VKC+FV ++SV+ +N IL GKTI +AR +FMH++ LS++ YMARFSLILSKT+
Sbjct: 189 PVKCFFVCMESVASVDNQDN-ILCGKTIRQARSVFMHVDNLSSLSNYMARFSLILSKTMN 247
Query: 141 LEVDLAAATVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDL 1
LEVDL+ ++ I D P +D++G+ ++ DGKP++HTDGTG+IS DL
Sbjct: 248 LEVDLSFVDIKPIADEPCRDKDGNAVYGTDGKPLIHTDGTGFISHDL 294
>gb|ESW24973.1| hypothetical protein PHAVU_004G1764001g, partial [Phaseolus
vulgaris]
Length = 689
Score = 204 bits (520), Expect = 1e-50
Identities = 113/221 (51%), Positives = 143/221 (64%), Gaps = 12/221 (5%)
Frame = -3
Query: 627 DRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIVKFLEDG-- 454
DR ++DWDSG+TH+Y C+V DGS FKGP L S++THLQRSLGDDN+L+VKF E+G
Sbjct: 170 DRQVYVDWDSGRTHVYQCYVSSDGSLRFKGPILQSTQTHLQRSLGDDNVLLVKFAENGIA 229
Query: 453 ---------AYAT-DNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAVKCYF 304
AY +EGI VGLR Y + K++ T S+VKCYF
Sbjct: 230 NNIRTSAEEAYRLYGKFGKEGINVGLRLYRFFVFKDGG-----KEEKKKDPTSSSVKCYF 284
Query: 303 VHIDSVSPYGCDENYILYGKTIGEARCLFMHINTLSTIEKYMARFSLILSKTIKLEVDLA 124
V + S NYIL KT+ EAR LFMH + L +++KYMARFSLILSKT KL +DLA
Sbjct: 285 VRMQSCWSIDGSANYILSNKTVSEARGLFMHAHLLPSLDKYMARFSLILSKTFKLNIDLA 344
Query: 123 AATVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDL 1
V+TI+D+ QDENG+II+D + KP + TDGTG+IS DL
Sbjct: 345 TVNVQTIQDVYCQDENGNIIYDNE-KPRILTDGTGFISGDL 384
>ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Capsella rubella]
gi|482565615|gb|EOA29804.1| hypothetical protein
CARUB_v10012898mg [Capsella rubella]
Length = 982
Score = 201 bits (511), Expect = 2e-49
Identities = 109/227 (48%), Positives = 139/227 (61%), Gaps = 10/227 (4%)
Frame = -3
Query: 651 GQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIV 472
G+KFC + D + L WDSGKTH Y CHV DGSY FKGP L S+ THL + LGD+N+L V
Sbjct: 197 GRKFCPQTDE-RVLQWDSGKTHYYQCHVAPDGSYTFKGPLLESTGTHLHKVLGDENVLTV 255
Query: 471 KFLE----------DGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYS 322
KF D + I + GI+VGLRRY + +K+ T
Sbjct: 256 KFANVQKNSSTYCSDSYFTYKGIAKNGIMVGLRRYKFFVFKDGGK----DDKNKDVSTKR 311
Query: 321 AVKCYFVHIDSVSPYGCDENYILYGKTIGEARCLFMHINTLSTIEKYMARFSLILSKTIK 142
A KCYF+ DS + ++ YI GK+I EAR FMH++TL ++ YMARFSLILSKT K
Sbjct: 312 A-KCYFIRTDSTASIDMEKPYIFSGKSIHEARMHFMHVHTLPSLANYMARFSLILSKTKK 370
Query: 141 LEVDLAAATVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDL 1
LEVDL E I+DIP D++G + D++ KP +H+DGTGYISEDL
Sbjct: 371 LEVDLTGVNFEIIKDIPCHDQDGKDVLDKNKKPRIHSDGTGYISEDL 417
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 193 bits (491), Expect = 3e-47
Identities = 102/227 (44%), Positives = 137/227 (60%), Gaps = 10/227 (4%)
Frame = -3
Query: 651 GQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIV 472
G+++C + DR + L WDSGKTH Y CHV DGSY FKGP L + THL + LGD+N+L V
Sbjct: 193 GRRYCPQTDR-RMLQWDSGKTHYYQCHVAPDGSYTFKGPLLEHTGTHLHKVLGDENVLTV 251
Query: 471 KFLE----DGAYATDN------IVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYS 322
KF + Y+ D I + GI++GLRRY + K++ +
Sbjct: 252 KFADVPKNSSTYSNDRYFTYKEIAKNGIMIGLRRYQFFVFKDGG-----KEEKKKDLSTK 306
Query: 321 AVKCYFVHIDSVSPYGCDENYILYGKTIGEARCLFMHINTLSTIEKYMARFSLILSKTIK 142
VKCYF+ DS + + YI GK+I EAR FMH++ T+ YMARFSLILSKT
Sbjct: 307 KVKCYFIRTDSTASCDMENPYIFTGKSIHEARMHFMHVHRAPTLANYMARFSLILSKTKT 366
Query: 141 LEVDLAAATVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDL 1
LEVD+ T + I+DI D++G + D++ KP +H+DGTGYISEDL
Sbjct: 367 LEVDMTGITFDPIDDIHCHDQDGKDVLDKNKKPCIHSDGTGYISEDL 413
>ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabidopsis thaliana]
gi|322967566|sp|O82190.2|RDR3_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 3;
Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase
3 gi|330251848|gb|AEC06942.1| probable RNA-dependent RNA
polymerase 3 [Arabidopsis thaliana]
Length = 992
Score = 192 bits (487), Expect = 1e-46
Identities = 104/226 (46%), Positives = 136/226 (60%), Gaps = 9/226 (3%)
Frame = -3
Query: 651 GQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIV 472
GQ++C +R + L+ DSG TH Y CHV DGSY FKG L ++ THL + LGDDN+L V
Sbjct: 193 GQRYCSPKERRRPLEGDSGMTHYYQCHVATDGSYKFKGHLLENTGTHLHKVLGDDNVLTV 252
Query: 471 KF---LEDGAYATD------NIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSA 319
KF L Y D I + GI+VGLRRY + K++ +
Sbjct: 253 KFDKVLGVETYCNDLYSTYKGIAKNGIMVGLRRYRFFVFKDGG-----KEEKKKDVSTKG 307
Query: 318 VKCYFVHIDSVSPYGCDENYILYGKTIGEARCLFMHINTLSTIEKYMARFSLILSKTIKL 139
VKCYF+ DS + YI GK++ EAR FMH+NTLS++ YM+RFSLILSKT L
Sbjct: 308 VKCYFIRTDSTASIDMQNPYIFAGKSMHEARMHFMHVNTLSSLPNYMSRFSLILSKTKTL 367
Query: 138 EVDLAAATVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDL 1
EVD+ T E I+DI D++ + D++GKP +H+DGTGYISEDL
Sbjct: 368 EVDMTGITFEQIDDIHCHDQDDKDVLDKNGKPCIHSDGTGYISEDL 413
>ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum]
gi|557110064|gb|ESQ50361.1| hypothetical protein
EUTSA_v10001897mg [Eutrema salsugineum]
Length = 988
Score = 190 bits (482), Expect = 4e-46
Identities = 100/214 (46%), Positives = 133/214 (62%), Gaps = 10/214 (4%)
Frame = -3
Query: 612 LDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIVKFLE----DGAYA 445
L+WDS KTH Y CHV DGSY FKGP L + THL + LGD+N+L VKF + Y+
Sbjct: 213 LEWDSEKTHYYQCHVASDGSYTFKGPLLEPTGTHLHKVLGDENVLTVKFADVQKNSSTYS 272
Query: 444 TDN------IVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAVKCYFVHIDSVS 283
D I + GI+VGLRRY K++ + + VKCYF+ DS +
Sbjct: 273 NDRYSAYKRIAKNGIMVGLRRYQFFVFKDVGKAEK-----KKDFSTNGVKCYFIRTDSTA 327
Query: 282 PYGCDENYILYGKTIGEARCLFMHINTLSTIEKYMARFSLILSKTIKLEVDLAAATVETI 103
+ YI GKTI EAR FMH++TL ++ KYMARFSLILSKT KLEVD+ T + I
Sbjct: 328 ANDMGKAYIFSGKTINEARMHFMHVHTLPSLAKYMARFSLILSKTKKLEVDMTGITYQEI 387
Query: 102 EDIPFQDENGSIIHDEDGKPILHTDGTGYISEDL 1
++I D+N +++ D++ +P +H+DGTGYISEDL
Sbjct: 388 KEIHCHDQNNNVVLDKNKEPRMHSDGTGYISEDL 421
>gb|EMJ05474.1| hypothetical protein PRUPE_ppa001584mg [Prunus persica]
Length = 798
Score = 189 bits (481), Expect = 5e-46
Identities = 108/221 (48%), Positives = 138/221 (62%), Gaps = 13/221 (5%)
Frame = -3
Query: 624 RSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSS-RTHLQRSLGDDNILIVKF------ 466
R DWDSGKT++Y+C V DGSY FKGP LN++ RT LQ+ LGDDN+L+VKF
Sbjct: 20 RHPTFDWDSGKTYVYHCEVSVDGSYKFKGPCLNNTKRTLLQKVLGDDNVLMVKFSDVVTE 79
Query: 465 -----LEDGAYAT-DNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAVKCYF 304
++D YA + EGILVGLRRY N+ K+ T S VKCYF
Sbjct: 80 RVPTAIKDNNYANYSKVAREGILVGLRRYQFFVFKDGG-----NKEKKKNPTSSPVKCYF 134
Query: 303 VHIDSVSPYGCDENYILYGKTIGEARCLFMHINTLSTIEKYMARFSLILSKTIKLEVDLA 124
+ + S + E+Y + I E RC+FMH +T+S++ YMARFSLILSKT LEVD +
Sbjct: 135 ICVGSNAAIDRSEDYKFSNRKIHETRCIFMHAHTVSSVSNYMARFSLILSKTESLEVDWS 194
Query: 123 AATVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDL 1
VE I+D DE+G+ I D DGKP++HTDGTG+ISEDL
Sbjct: 195 LVKVEDIDDEYCLDESGNRI-DRDGKPLIHTDGTGFISEDL 234
>ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cicer
arietinum]
Length = 997
Score = 189 bits (479), Expect = 8e-46
Identities = 108/230 (46%), Positives = 142/230 (61%), Gaps = 13/230 (5%)
Frame = -3
Query: 651 GQKFCDE-WDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILI 475
GQK+ + DR +LDWDSG+TH+Y C V +GS FKGP L +RTHLQ+SLGDDN+L+
Sbjct: 186 GQKYIERPTDRLVYLDWDSGRTHIYQCFVSPNGSLRFKGPILQHTRTHLQKSLGDDNVLL 245
Query: 474 VKFLED------------GAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEK 331
VKF ED A + +EG+ VGLR Y + K++
Sbjct: 246 VKFAEDQYARKSETSAQKAAKHYEKFGKEGLRVGLRLYRFFVFKVGG-----KEEKKKDP 300
Query: 330 TYSAVKCYFVHIDSVSPYGCDENYILYGKTIGEARCLFMHINTLSTIEKYMARFSLILSK 151
T S+VKCYFV +S E+YIL +T+ E+R LFMH + L I+KYMARFSLILSK
Sbjct: 301 TTSSVKCYFVRTESSCSTDERESYILSNRTMFESRSLFMHAHMLPNIDKYMARFSLILSK 360
Query: 150 TIKLEVDLAAATVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDL 1
T KL VD +V+TI D+ QDE+G+ ++ + + IL TDGTG+ISEDL
Sbjct: 361 TYKLNVDWTTVSVKTIPDVCCQDEHGNTVYHNEKRCIL-TDGTGFISEDL 409
>ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
gi|548857326|gb|ERN15132.1| hypothetical protein
AMTR_s00056p00110240 [Amborella trichopoda]
Length = 988
Score = 188 bits (477), Expect = 1e-45
Identities = 108/234 (46%), Positives = 142/234 (60%), Gaps = 17/234 (7%)
Frame = -3
Query: 651 GQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIV 472
G+++ + DR LDWDSGK Y CHV G++ FKGP+L S++THL+R LGDD +L V
Sbjct: 180 GERYASQTDRRN-LDWDSGKAENYQCHVDPVGNFSFKGPFLESTQTHLRRVLGDDKVLTV 238
Query: 471 KFLED------GAYATDN-------IVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEK 331
KF E+ G + I ++GILVGLRRY KEEK
Sbjct: 239 KFAEEMVDERRGEFNLSRSKNIFRRIAKDGILVGLRRYHFFVFKDGG---------KEEK 289
Query: 330 TYSA----VKCYFVHIDSVSPYGCDENYILYGKTIGEARCLFMHINTLSTIEKYMARFSL 163
+A VKCYFV + S + YIL KTI EAR +FM ++T+ + KYMARFSL
Sbjct: 290 RKNANTTGVKCYFVCMKSDAESDMHTPYILSNKTIQEARSMFMDVHTVPNLAKYMARFSL 349
Query: 162 ILSKTIKLEVDLAAATVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDL 1
ILSKTIKLEVDL + +E I D P D + I++D++G+ ++HTDGTG+ISEDL
Sbjct: 350 ILSKTIKLEVDLGSVNIERINDKPCLDNHNEIVYDQNGQCLIHTDGTGFISEDL 403